diff options
| author | Christoph Helma <helma@in-silico.ch> | 2011-05-23 14:37:05 +0000 |
|---|---|---|
| committer | Christoph Helma <helma@in-silico.ch> | 2011-05-23 14:37:05 +0000 |
| commit | 5e19668ccd95d6d70973f00e3b1beff0b3b9cfa8 (patch) | |
| tree | 3fedc6cd9736ff578d524aaac034b7581ad8b1e9 /fminer.rb | |
| parent | 750ea63f2ad3bd998b698334fdd52488b139171b (diff) | |
| parent | 6cb25029a9e6f8dc397f642892a020ab4de4c0f4 (diff) | |
Merge branch 'new_model_prediction_format' into development
Diffstat (limited to 'fminer.rb')
| -rw-r--r-- | fminer.rb | 9 |
1 files changed, 4 insertions, 5 deletions
@@ -23,7 +23,7 @@ get "/fminer/bbrc/?" do DC.title => 'fminer backbone refinement class representatives', DC.creator => "andreas@maunz.de, helma@in-silico.ch", DC.contributor => "vorgrimmlerdavid@gmx.de", - RDF.type => [OTA.PatternMiningSupervised], + RDF.type => [OT.Algorithm,OTA.PatternMiningSupervised], OT.parameters => [ { DC.description => "Dataset URI", OT.paramScope => "mandatory", DC.title => "dataset_uri" }, { DC.description => "Feature URI for dependent variable", OT.paramScope => "mandatory", DC.title => "prediction_feature" }, @@ -44,7 +44,7 @@ get "/fminer/last/?" do DC.title => 'fminer latent structure class representatives', DC.creator => "andreas@maunz.de, helma@in-silico.ch", DC.contributor => "vorgrimmlerdavid@gmx.de", - RDF.type => [OTA.PatternMiningSupervised], + RDF.type => [OT.Algorithm,OTA.PatternMiningSupervised], OT.parameters => [ { DC.description => "Dataset URI", OT.paramScope => "mandatory", DC.title => "dataset_uri" }, { DC.description => "Feature URI for dependent variable", OT.paramScope => "mandatory", DC.title => "prediction_feature" }, @@ -220,7 +220,7 @@ post '/fminer/bbrc/?' do features << smarts metadata = { OT.hasSource => url_for('/fminer/bbrc', :full), - RDF.type => [OT.Substructure], + RDF.type => [OT.Feature, OT.Substructure], OT.smarts => smarts, OT.pValue => p_value.to_f, OT.effect => effect, @@ -354,7 +354,6 @@ post '/fminer/last/?' do end end end - raise "No compounds in dataset #{training_dataset.uri}" if compounds.size==0 @@ -383,7 +382,7 @@ post '/fminer/last/?' do unless features.include? smarts features << smarts metadata = { - RDF.type => [OT.Substructure], + RDF.type => [OT.Feature, OT.Substructure], OT.hasSource => feature_dataset.uri, OT.smarts => smarts, OT.pValue => p_value.to_f.abs, |