diff options
| m--------- | bbrc-sample | 0 | ||||
| -rw-r--r-- | fminer.rb | 4 |
2 files changed, 2 insertions, 2 deletions
diff --git a/bbrc-sample b/bbrc-sample -Subproject bbcfdfc85108774275a98b33ba133a0a9cab9c8 +Subproject 6ddfc2dc414f1e64ac16286c0cee5a4b0022d2e @@ -377,12 +377,12 @@ post '/fminer/bbrc/sample/?' do @r.assign "min.frequency.per.sample", fminer.minfreq @r.assign "min.sampling.support", min_sampling_support @r.assign "random.seed", random_seed - @r.assign "do.backbone", backbone + @r.assign "backbone", backbone @r.assign "bbrc.service", File.join(CONFIG[:services]["opentox-algorithm"], "fminer/bbrc") @r.assign "dataset.service", CONFIG[:services]["opentox-dataset"] @r.eval "source(\"bbrc-sample/bbrc-sample.R\")" begin - @r.eval "bootBbrc(dataset.uri, prediction.feature.uri, num.boots, min.frequency.per.sample, min.sampling.support, NULL, bbrc.service, dataset.service, T, random.seed, as.logical(do.backbone))" + @r.eval "bootBbrc(dataset.uri, prediction.feature.uri, num.boots, min.frequency.per.sample, min.sampling.support, NULL, bbrc.service, dataset.service, T, random.seed, as.logical(backbone))" smarts = (@r.pull "ans.patterns").collect! { |id| id.gsub(/\'/,"") } # remove extra quotes around smarts r_p_values = @r.pull "ans.p.values" merge_time = @r.pull "merge.time" |