diff options
Diffstat (limited to 'lib/algorithm/transform.rb')
| -rw-r--r-- | lib/algorithm/transform.rb | 6 |
1 files changed, 5 insertions, 1 deletions
diff --git a/lib/algorithm/transform.rb b/lib/algorithm/transform.rb index ec25526..c851f73 100644 --- a/lib/algorithm/transform.rb +++ b/lib/algorithm/transform.rb @@ -334,8 +334,13 @@ module OpenTox # @param[Array] training_props Propositionalized data for this neighbor # @param[Integer] Index of neighbor def add_neighbor(training_props, idx) + puts idx + #puts training_props.inspect + #puts @q_prop.inspect + #puts @model.acts[idx].to_s unless @model.acts[idx].nil? sim = similarity(training_props) + puts sim if sim > @model.min_sim.to_f @model.neighbors << { :compound => @cmpds[idx], @@ -381,7 +386,6 @@ module OpenTox end end - # Replaces nils by zeroes in n_prop and q_prop # Enables the use of Tanimoto similarities with arrays (rows of n_prop and q_prop) def convert_nils |