algorithm - Deprecated, for archival purposes only

Age	Commit message (Collapse)	Author
2015-08-09	crossvalidation.rb, neighbor.rb addedmongodb	Christoph Helma

2015-08-09	customized prediction algorithms implemented	Christoph Helma

2015-08-07	initial k-nn weighted average implementation	Christoph Helma

2015-08-04	validation.rb added	Christoph Helma

2015-08-03	initial classification validation	Christoph Helma

2015-08-01	more timer details	Christoph Helma

2015-08-01	50 times faster bbrc setup by eliminating @fminer.add_fminer_data	Christoph Helma

2015-07-31	intermediary commit	Christoph Helma

2015-07-31	descriptor tests working	Christoph Helma

2015-07-29	kazius lazar predictions working	Christoph Helma

2015-07-29	bbrc features for kazius with minfreq 20 successfully created and stored	Christoph Helma

2015-07-27	reasonable query performace for data_entries	Christoph Helma

2015-07-21	intermediary commit before switching to generalised storage model	Christoph Helma

2015-07-20	lazar-fminer classification passes test	Christoph Helma

2015-07-19	lazar predictions working in principle	Christoph Helma

2015-07-18	initial bbrc parsing fix. speedup ~65 times	Christoph Helma

2015-07-18	trying to speed up bbrc parsing	Christoph Helma

2015-07-02	API: add descriptor get routes	rautenberg

2015-07-02	API: add descriptor get routes	rautenberg

2015-07-02	API: post /fminer/bbrc and /fminer/last set param prediction_feature to ↵	rautenberg
	requested true
2015-07-02	API: add routes post: /fminer/bbrc and /fminer/last	rautenberg

2015-06-25	add default accept type for representations in API	rautenberg

2015-06-25	add more routes to API	rautenberg

2015-06-25	add /algorithm/lazar/predict route to API	rautenberg

2015-06-18	hotfix for wrong PATH_INFO in request env /algorithm/api/algorithm.json is ↵	rautenberg
	/api/algorithm.json part 2
2015-06-18	hotfix for wrong PATH_INFO in request env /algorithm/api/algorithm.json is ↵	rautenberg
	/api/algorithm.json
2015-06-18	initial swagger API docs for algorithm/lazar	rautenberg

2014-11-05	fixed type definition	gebele

2014-10-30	provide descriptor values	mguetlein

2014-10-30	add arom detection to cdk feature generation	mguetlein

2014-10-21	fix lazar regression prediction for more than one compound	mguetlein

2014-10-21	fix lazar regression prediction for more than one compound, copy old ↵	mguetlein
	prediction for equal compound, add debug messages
2014-10-17	add babel_3d_cache folder, second try (deleteing the dummy file does delete ↵	mguetlein
	the folder)
2014-10-17	remove file within dir again	mguetlein

2014-10-17	Merge branch 'development' of ssh://github.com/opentox/algorithm into ↵	mguetlein
	development
2014-10-17	addding babel_3d_cache directory	mguetlein

2014-10-16	Fixed env variable for R install.	ist

2014-10-10	add per compound caching for 3d generation	mguetlein

2014-10-10	extend model building and prediction to accept feature_dataset_uri (instead ↵	mguetlein
	of feature_generation_uri) again
2014-10-10	fix cdkdescriptor calculation: find classes with 'descriptor' in the middle ↵	mguetlein
	of the class name
2014-10-10	recommit with correct descriptor.rb: fix storing feature datasets for ↵	mguetlein
	dataset with duplicate compounds, preserve feature order
2014-10-10	Revert "fix storing feature datasets for dataset with duplicate compounds, ↵	mguetlein
	preserve feature order" This reverts commit 02e63dd161f07b9ec750af61b933ce60c34be42c.
2014-10-10	Merge branch 'development' of ssh://github.com/opentox/algorithm into ↵	mguetlein
	development
2014-10-10	fix storing feature datasets for dataset with duplicate compounds, preserve ↵	mguetlein
	feature order
2014-10-09	Use system variable for R mirror.	davor

2014-10-08	cdk descriptor class can now compoute single feature values (e.g. ↵	mguetlein
	Cdk.ALOGP.ALogP out of 3 values provided by Cdk.ALOG)
2014-10-08	raise error when external program fails (i.e., cdk or joelib)	mguetlein

2014-10-07	fix calculation of cdk features for test compounds, fix error with missing ↵	mguetlein
	values in training data features in last column
2014-10-07	fix 3d structure caching, add debug messages for descriptor calculation ↵	mguetlein
	(this may take quite some time)
2014-10-07	print status in cdk desc calculation, this may take some time	mguetlein