From b0f3f05d6a8df53956547d04a6a82316ee78b102 Mon Sep 17 00:00:00 2001 From: Andreas Maunz Date: Tue, 8 May 2012 08:18:04 +0200 Subject: Removed debug --- bbrc-sample | 2 +- fminer.rb | 5 +---- 2 files changed, 2 insertions(+), 5 deletions(-) diff --git a/bbrc-sample b/bbrc-sample index fc4ae7d..813595b 160000 --- a/bbrc-sample +++ b/bbrc-sample @@ -1 +1 @@ -Subproject commit fc4ae7d22a60838a62747069660542c304ce2f12 +Subproject commit 813595bc811e1fdb71dee0ea9e2f0dc9b6a44cdc diff --git a/fminer.rb b/fminer.rb index ee7f8e9..abedc36 100644 --- a/fminer.rb +++ b/fminer.rb @@ -359,7 +359,7 @@ post '/fminer/bbrc/sample/?' do @r.assign "dataset.service", CONFIG[:services]["opentox-dataset"] @r.eval "source(\"bbrc-sample/bbrc-sample.R\")" - @r.eval "bootBbrc(dataset.uri, prediction.feature.uri, num.boots, min.frequency.per.sample, min.sampling.support, NULL, bbrc.service, dataset.service, F)" + @r.eval "bootBbrc(dataset.uri, prediction.feature.uri, num.boots, min.frequency.per.sample, min.sampling.support, NULL, bbrc.service, dataset.service, T)" smarts = (@r.pull "ans.patterns").collect! { |id| id.gsub(/\'/,"") } # remove extra quotes around smarts r_p_values = @r.pull "ans.p.values" @@ -369,9 +369,6 @@ post '/fminer/bbrc/sample/?' do lu = LU.new # AM LAST: uses last-utils here params[:nr_hits] == "true" ? hit_count=true: hit_count=false - - LOGGER.debug fminer.smi.to_yaml - LOGGER.debug smarts.to_yaml matches, counts = lu.match_rb(fminer.smi,smarts,hit_count) # AM LAST: creates instantiations matches.each do |smarts, ids| -- cgit v1.2.3