From b0f3f05d6a8df53956547d04a6a82316ee78b102 Mon Sep 17 00:00:00 2001 From: Andreas Maunz Date: Tue, 8 May 2012 08:18:04 +0200 Subject: Removed debug --- fminer.rb | 5 +---- 1 file changed, 1 insertion(+), 4 deletions(-) (limited to 'fminer.rb') diff --git a/fminer.rb b/fminer.rb index ee7f8e9..abedc36 100644 --- a/fminer.rb +++ b/fminer.rb @@ -359,7 +359,7 @@ post '/fminer/bbrc/sample/?' do @r.assign "dataset.service", CONFIG[:services]["opentox-dataset"] @r.eval "source(\"bbrc-sample/bbrc-sample.R\")" - @r.eval "bootBbrc(dataset.uri, prediction.feature.uri, num.boots, min.frequency.per.sample, min.sampling.support, NULL, bbrc.service, dataset.service, F)" + @r.eval "bootBbrc(dataset.uri, prediction.feature.uri, num.boots, min.frequency.per.sample, min.sampling.support, NULL, bbrc.service, dataset.service, T)" smarts = (@r.pull "ans.patterns").collect! { |id| id.gsub(/\'/,"") } # remove extra quotes around smarts r_p_values = @r.pull "ans.p.values" @@ -369,9 +369,6 @@ post '/fminer/bbrc/sample/?' do lu = LU.new # AM LAST: uses last-utils here params[:nr_hits] == "true" ? hit_count=true: hit_count=false - - LOGGER.debug fminer.smi.to_yaml - LOGGER.debug smarts.to_yaml matches, counts = lu.match_rb(fminer.smi,smarts,hit_count) # AM LAST: creates instantiations matches.each do |smarts, ids| -- cgit v1.2.3