ofs | hex dump | ascii |
---|
0000 | ca fe ba be 00 00 00 31 01 79 0a 00 71 00 9d 09 00 70 00 9e 09 00 70 00 9f 09 00 70 00 a0 0a 00 | .......1.y..q....p....p....p.... |
0020 | a1 00 a2 07 00 a3 0a 00 06 00 9d 08 00 a4 0a 00 06 00 a5 0a 00 71 00 a6 0a 00 a7 00 a8 0a 00 06 | .....................q.......... |
0040 | 00 a9 0a 00 a1 00 aa 09 00 70 00 ab 0a 00 12 00 ac 09 00 70 00 ad 0a 00 16 00 ac 07 00 ae 07 00 | .........p.........p............ |
0060 | af 0a 00 13 00 b0 0a 00 12 00 b1 07 00 b2 0a 00 16 00 b3 08 00 b4 09 00 70 00 b5 07 00 b6 0a 00 | ........................p....... |
0080 | 1a 00 b7 08 00 b8 0a 00 12 00 b9 0a 00 30 00 ba 0a 00 30 00 bb 0a 00 30 00 bc 0a 00 1a 00 bd 09 | .............0....0....0........ |
00a0 | 00 be 00 bf 0a 00 1a 00 a9 0a 00 70 00 c0 07 00 c1 0a 00 25 00 9d 0a 00 c2 00 c3 08 00 c4 0a 00 | ...........p.......%............ |
00c0 | c2 00 c5 08 00 c6 0a 00 30 00 c7 08 00 c8 0a 00 be 00 c9 0a 00 25 00 ca 0a 00 25 00 cb 07 00 cc | ........0............%....%..... |
00e0 | 0b 00 cd 00 ce 0b 00 cd 00 cf 08 00 d0 0a 00 c2 00 d1 07 00 d2 08 00 d3 0a 00 35 00 d4 0a 00 70 | ..........................5....p |
0100 | 00 d5 08 00 d6 0a 00 06 00 d7 08 00 d8 0b 00 cd 00 d9 0a 00 da 00 db 0a 00 da 00 dc 0b 00 dd 00 | ................................ |
0120 | de 0a 00 df 00 e0 0b 00 dd 00 e1 0a 00 c2 00 e2 0b 00 dd 00 e3 0a 00 e4 00 e5 0b 00 cd 00 e6 0b | ................................ |
0140 | 00 cd 00 e7 0b 00 cd 00 e8 07 00 e9 08 00 ea 08 00 eb 0a 00 48 00 ec 0b 00 cd 00 ed 0a 00 70 00 | ....................H.........p. |
0160 | ee 07 00 ef 08 00 f0 0a 00 4e 00 d4 08 00 f1 08 00 f2 0a 00 16 00 f3 0a 00 16 00 f4 08 00 f5 0b | .........N...................... |
0180 | 00 cd 00 f6 0a 00 16 00 f7 0a 00 16 00 f8 0b 00 cd 00 f9 08 00 fa 08 00 fb 0b 00 dd 00 fc 0a 00 | ................................ |
01a0 | da 00 fd 0a 00 16 00 fe 08 00 ff 0b 00 dd 01 00 0a 00 16 01 01 0b 00 dd 01 02 0b 00 dd 01 03 0a | ................................ |
01c0 | 01 04 01 05 0b 00 dd 01 06 0b 00 dd 01 07 0b 01 08 01 09 0b 01 08 01 0a 0b 01 0b 01 0c 0b 01 0b | ................................ |
01e0 | 01 0d 0b 00 dd 01 0e 08 01 0f 08 01 10 0a 00 a1 01 11 08 01 12 07 01 13 07 01 14 07 01 15 01 00 | ................................ |
0200 | 06 6c 6f 67 67 65 72 01 00 1b 4c 6f 72 67 2f 61 70 61 63 68 65 2f 6c 6f 67 34 6a 2f 43 61 74 65 | .logger...Lorg/apache/log4j/Cate |
0220 | 67 6f 72 79 3b 01 00 0b 64 65 73 63 72 69 70 74 69 6f 6e 01 00 12 4c 6a 61 76 61 2f 6c 61 6e 67 | gory;...description...Ljava/lang |
0240 | 2f 53 74 72 69 6e 67 3b 01 00 0d 43 6f 6e 73 74 61 6e 74 56 61 6c 75 65 01 00 0a 65 78 74 65 6e | /String;...ConstantValue...exten |
0260 | 73 69 6f 6e 73 01 00 13 5b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 01 00 0e 66 6f | sions...[Ljava/lang/String;...fo |
0280 | 72 63 65 55 6e 69 78 53 74 79 6c 65 01 00 01 5a 01 00 03 6c 6e 72 01 00 1a 4c 6a 61 76 61 2f 69 | rceUnixStyle...Z...lnr...Ljava/i |
02a0 | 6f 2f 4c 69 6e 65 4e 75 6d 62 65 72 52 65 61 64 65 72 3b 01 00 0d 6d 6f 6c 65 63 75 6c 65 45 6e | o/LineNumberReader;...moleculeEn |
02c0 | 74 72 79 01 00 01 49 01 00 02 70 73 01 00 16 4c 63 66 6f 72 6d 61 74 2f 50 72 69 6e 74 66 53 74 | try...I...ps...Lcformat/PrintfSt |
02e0 | 72 65 61 6d 3b 01 00 06 3c 69 6e 69 74 3e 01 00 03 28 29 56 01 00 04 43 6f 64 65 01 00 0b 63 6c | ream;...<init>...()V...Code...cl |
0300 | 6f 73 65 52 65 61 64 65 72 01 00 0a 45 78 63 65 70 74 69 6f 6e 73 07 01 16 01 00 0b 63 6c 6f 73 | oseReader...Exceptions......clos |
0320 | 65 57 72 69 74 65 72 01 00 0a 69 6e 69 74 52 65 61 64 65 72 01 00 18 28 4c 6a 61 76 61 2f 69 6f | eWriter...initReader...(Ljava/io |
0340 | 2f 49 6e 70 75 74 53 74 72 65 61 6d 3b 29 56 01 00 0a 69 6e 69 74 57 72 69 74 65 72 01 00 19 28 | /InputStream;)V...initWriter...( |
0360 | 4c 6a 61 76 61 2f 69 6f 2f 4f 75 74 70 75 74 53 74 72 65 61 6d 3b 29 56 01 00 10 69 6e 70 75 74 | Ljava/io/OutputStream;)V...input |
0380 | 44 65 73 63 72 69 70 74 69 6f 6e 01 00 14 28 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e | Description...()Ljava/lang/Strin |
03a0 | 67 3b 01 00 13 69 6e 70 75 74 46 69 6c 65 45 78 74 65 6e 73 69 6f 6e 73 01 00 15 28 29 5b 4c 6a | g;...inputFileExtensions...()[Lj |
03c0 | 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 01 00 11 6f 75 74 70 75 74 44 65 73 63 72 69 70 | ava/lang/String;...outputDescrip |
03e0 | 74 69 6f 6e 01 00 14 6f 75 74 70 75 74 46 69 6c 65 45 78 74 65 6e 73 69 6f 6e 73 01 00 04 72 65 | tion...outputFileExtensions...re |
0400 | 61 64 01 00 1e 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 | ad...(Ljoelib2/molecule/Molecule |
0420 | 3b 29 5a 01 00 30 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c | ;)Z..0(Ljoelib2/molecule/Molecul |
0440 | 65 3b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 5a 01 00 08 72 65 61 64 61 62 6c | e;Ljava/lang/String;)Z...readabl |
0460 | 65 01 00 03 28 29 5a 01 00 18 72 65 73 65 74 4d 6f 6c 65 63 75 6c 65 45 6e 74 72 79 4e 75 6d 62 | e...()Z...resetMoleculeEntryNumb |
0480 | 65 72 01 00 0f 73 6b 69 70 52 65 61 64 65 72 45 6e 74 72 79 01 00 05 77 72 69 74 65 01 00 09 77 | er...skipReaderEntry...write...w |
04a0 | 72 69 74 65 61 62 6c 65 01 00 08 3c 63 6c 69 6e 69 74 3e 0c 00 82 00 83 0c 00 7a 00 7b 0c 00 7e | riteable...<clinit>.......z.{..~ |
04c0 | 00 7f 0c 00 73 00 74 07 01 17 0c 01 18 00 97 01 00 17 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 | ....s.t...........java/lang/Stri |
04e0 | 6e 67 42 75 69 6c 64 65 72 01 00 0b 49 6e 69 74 69 61 6c 69 7a 65 20 0c 01 19 01 1a 0c 01 1b 01 | ngBuilder...Initialize.......... |
0500 | 1c 07 01 1d 0c 01 1e 00 8e 0c 01 1f 00 8e 0c 01 20 01 21 0c 00 7c 00 7d 0c 01 22 00 83 0c 00 80 | ..................!..|.}.."..... |
0520 | 00 81 01 00 18 6a 61 76 61 2f 69 6f 2f 4c 69 6e 65 4e 75 6d 62 65 72 52 65 61 64 65 72 01 00 19 | .....java/io/LineNumberReader... |
0540 | 6a 61 76 61 2f 69 6f 2f 49 6e 70 75 74 53 74 72 65 61 6d 52 65 61 64 65 72 0c 00 82 00 8a 0c 00 | java/io/InputStreamReader....... |
0560 | 82 01 23 01 00 14 63 66 6f 72 6d 61 74 2f 50 72 69 6e 74 66 53 74 72 65 61 6d 0c 00 82 00 8c 01 | ..#...cformat/PrintfStream...... |
0580 | 00 09 48 79 70 65 72 63 68 65 6d 0c 00 78 00 79 01 00 16 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 | ..Hyperchem..x.y...java/lang/Str |
05a0 | 69 6e 67 42 75 66 66 65 72 0c 00 82 01 24 01 00 06 65 6e 64 6d 6f 6c 0c 01 25 00 8e 0c 01 26 01 | ingBuffer....$...endmol..%....&. |
05c0 | 27 0c 01 28 01 29 0c 01 2a 01 2b 0c 01 19 01 2c 07 01 2d 0c 01 2e 00 76 0c 00 93 00 95 01 00 10 | '..(.)..*.+....,..-....v........ |
05e0 | 6a 61 76 61 2f 75 74 69 6c 2f 56 65 63 74 6f 72 07 01 2f 0c 01 30 01 31 01 00 03 58 59 5a 0c 01 | java/util/Vector../..0.1...XYZ.. |
0600 | 32 01 33 01 00 03 6d 6f 6c 0c 01 34 01 33 01 00 04 20 09 0d 0a 0c 01 35 01 36 0c 01 37 01 27 0c | 2.3...mol..4.3.........5.6..7.'. |
0620 | 01 38 01 39 01 00 10 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 07 01 3a 0c 01 3b 01 3c 0c | .8.9...java/lang/String..:..;.<. |
0640 | 01 3d 00 83 01 00 03 49 4e 54 0c 01 3e 01 33 01 00 1e 6a 6f 65 6c 69 62 32 2f 69 6f 2f 4d 6f 6c | .=.....INT..>.3...joelib2/io/Mol |
0660 | 65 63 75 6c 65 49 4f 45 78 63 65 70 74 69 6f 6e 01 00 15 4d 69 73 73 69 6e 67 20 27 65 6e 64 6d | eculeIOException...Missing.'endm |
0680 | 6f 6c 27 20 74 61 67 2e 0c 00 82 01 3c 0c 00 99 00 97 01 00 14 43 6f 72 72 75 70 74 65 64 20 61 | ol'.tag.....<........Corrupted.a |
06a0 | 74 6f 6d 20 6c 69 6e 65 20 0c 01 19 01 3f 01 00 01 2e 0c 01 40 01 41 07 01 42 0c 01 30 01 43 0c | tom.line.....?......@.A..B..0.C. |
06c0 | 01 44 01 2b 07 01 45 0c 01 46 01 24 07 01 47 0c 01 48 01 49 0c 01 4a 01 4b 0c 01 4c 01 4d 0c 01 | .D.+..E..F.$..G..H.I..J.K..L.M.. |
06e0 | 4e 01 3c 07 01 4f 0c 01 50 01 2b 0c 01 51 01 27 0c 01 52 01 53 0c 01 54 01 55 01 00 13 6a 61 76 | N.<..O..P.+..Q.'..R.S..T.U...jav |
0700 | 61 2f 6c 61 6e 67 2f 45 78 63 65 70 74 69 6f 6e 01 00 13 45 72 72 6f 72 20 69 6e 20 61 74 6f 6d | a/lang/Exception...Error.in.atom |
0720 | 20 6c 69 6e 65 20 01 00 02 3a 20 0c 01 56 00 8e 0c 01 57 00 83 0c 00 9a 00 95 01 00 14 63 66 6f | .line....:...V....W..........cfo |
0740 | 72 6d 61 74 2f 50 72 69 6e 74 66 46 6f 72 6d 61 74 01 00 05 25 38 2e 35 66 01 00 04 25 2d 33 73 | rmat/PrintfFormat...%8.5f...%-3s |
0760 | 01 00 04 6d 6f 6c 20 0c 01 58 01 3c 0c 01 58 01 24 01 00 01 20 0c 01 59 00 8e 0c 01 58 01 5a 0c | ...mol...X.<..X.$......Y....X.Z. |
0780 | 01 5b 00 83 0c 01 5c 01 5d 01 00 05 61 74 6f 6d 20 01 00 03 20 2d 20 0c 01 5e 01 27 0c 01 5f 01 | .[....\.]...atom.....-...^.'.._. |
07a0 | 60 0c 01 61 01 62 01 00 07 20 2a 2a 20 20 2d 20 0c 01 63 01 64 0c 01 61 01 65 0c 01 66 01 64 0c | `..a.b....**..-...c.d..a.e..f.d. |
07c0 | 01 67 01 64 07 01 68 0c 01 69 01 6a 0c 01 6b 01 27 0c 01 6c 01 6d 07 01 6e 0c 01 6f 00 97 0c 01 | .g.d..h..i.j..k.'..l.m..n..o.... |
07e0 | 70 01 71 07 01 72 0c 01 73 01 27 0c 01 74 01 75 0c 01 76 01 27 01 00 07 65 6e 64 6d 6f 6c 20 01 | p.q..r..s.'..t.u..v.'...endmol.. |
0800 | 00 14 6a 6f 65 6c 69 62 32 2e 69 6f 2e 74 79 70 65 73 2e 48 49 4e 0c 01 77 01 78 01 00 03 68 69 | ..joelib2.io.types.HIN..w.x...hi |
0820 | 6e 01 00 14 6a 6f 65 6c 69 62 32 2f 69 6f 2f 74 79 70 65 73 2f 48 49 4e 01 00 10 6a 61 76 61 2f | n...joelib2/io/types/HIN...java/ |
0840 | 6c 61 6e 67 2f 4f 62 6a 65 63 74 01 00 19 6a 6f 65 6c 69 62 32 2f 69 6f 2f 4d 6f 6c 65 63 75 6c | lang/Object...joelib2/io/Molecul |
0860 | 65 46 69 6c 65 49 4f 01 00 13 6a 61 76 61 2f 69 6f 2f 49 4f 45 78 63 65 70 74 69 6f 6e 01 00 19 | eFileIO...java/io/IOException... |
0880 | 6f 72 67 2f 61 70 61 63 68 65 2f 6c 6f 67 34 6a 2f 43 61 74 65 67 6f 72 79 01 00 0e 69 73 44 65 | org/apache/log4j/Category...isDe |
08a0 | 62 75 67 45 6e 61 62 6c 65 64 01 00 06 61 70 70 65 6e 64 01 00 2d 28 4c 6a 61 76 61 2f 6c 61 6e | bugEnabled...append..-(Ljava/lan |
08c0 | 67 2f 53 74 72 69 6e 67 3b 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 42 75 69 6c 64 | g/String;)Ljava/lang/StringBuild |
08e0 | 65 72 3b 01 00 08 67 65 74 43 6c 61 73 73 01 00 13 28 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 43 6c | er;...getClass...()Ljava/lang/Cl |
0900 | 61 73 73 3b 01 00 0f 6a 61 76 61 2f 6c 61 6e 67 2f 43 6c 61 73 73 01 00 07 67 65 74 4e 61 6d 65 | ass;...java/lang/Class...getName |
0920 | 01 00 08 74 6f 53 74 72 69 6e 67 01 00 05 64 65 62 75 67 01 00 15 28 4c 6a 61 76 61 2f 6c 61 6e | ...toString...debug...(Ljava/lan |
0940 | 67 2f 4f 62 6a 65 63 74 3b 29 56 01 00 05 63 6c 6f 73 65 01 00 13 28 4c 6a 61 76 61 2f 69 6f 2f | g/Object;)V...close...(Ljava/io/ |
0960 | 52 65 61 64 65 72 3b 29 56 01 00 04 28 49 29 56 01 00 08 72 65 61 64 4c 69 6e 65 01 00 06 6c 65 | Reader;)V...(I)V...readLine...le |
0980 | 6e 67 74 68 01 00 03 28 29 49 01 00 06 63 68 61 72 41 74 01 00 04 28 49 29 43 01 00 07 69 6e 64 | ngth...()I...charAt...(I)C...ind |
09a0 | 65 78 4f 66 01 00 15 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 49 01 00 2c 28 | exOf...(Ljava/lang/String;)I..,( |
09c0 | 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 | Ljava/lang/String;)Ljava/lang/St |
09e0 | 72 69 6e 67 42 75 66 66 65 72 3b 01 00 1a 6a 6f 65 6c 69 62 32 2f 75 74 69 6c 2f 48 65 6c 70 65 | ringBuffer;...joelib2/util/Helpe |
0a00 | 72 4d 65 74 68 6f 64 73 01 00 03 65 6f 6c 01 00 2a 6a 6f 65 6c 69 62 32 2f 64 61 74 61 2f 42 61 | rMethods...eol..*joelib2/data/Ba |
0a20 | 73 69 63 41 74 6f 6d 54 79 70 65 43 6f 6e 76 65 72 73 69 6f 6e 48 6f 6c 64 65 72 01 00 08 69 6e | sicAtomTypeConversionHolder...in |
0a40 | 73 74 61 6e 63 65 01 00 2e 28 29 4c 6a 6f 65 6c 69 62 32 2f 64 61 74 61 2f 42 61 73 69 63 41 74 | stance...()Ljoelib2/data/BasicAt |
0a60 | 6f 6d 54 79 70 65 43 6f 6e 76 65 72 73 69 6f 6e 48 6f 6c 64 65 72 3b 01 00 0b 73 65 74 46 72 6f | omTypeConversionHolder;...setFro |
0a80 | 6d 54 79 70 65 01 00 15 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 5a 01 00 0a | mType...(Ljava/lang/String;)Z... |
0aa0 | 73 74 61 72 74 73 57 69 74 68 01 00 08 74 6f 6b 65 6e 69 7a 65 01 00 37 28 4c 6a 61 76 61 2f 75 | startsWith...tokenize..7(Ljava/u |
0ac0 | 74 69 6c 2f 4c 69 73 74 3b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 4c 6a 61 76 61 | til/List;Ljava/lang/String;Ljava |
0ae0 | 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 5a 01 00 04 73 69 7a 65 01 00 03 67 65 74 01 00 15 28 | /lang/String;)Z...size...get...( |
0b00 | 49 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 4f 62 6a 65 63 74 3b 01 00 19 6a 6f 65 6c 69 62 32 2f 6d | I)Ljava/lang/Object;...joelib2/m |
0b20 | 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 01 00 08 73 65 74 54 69 74 6c 65 01 00 15 28 4c | olecule/Molecule...setTitle...(L |
0b40 | 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 56 01 00 0b 62 65 67 69 6e 4d 6f 64 69 66 | java/lang/String;)V...beginModif |
0b60 | 79 01 00 09 73 65 74 54 6f 54 79 70 65 01 00 1c 28 49 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 | y...setToType...(I)Ljava/lang/St |
0b80 | 72 69 6e 67 42 75 69 6c 64 65 72 3b 01 00 07 6e 65 77 41 74 6f 6d 01 00 1a 28 5a 29 4c 6a 6f 65 | ringBuilder;...newAtom...(Z)Ljoe |
0ba0 | 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 41 74 6f 6d 3b 01 00 1f 6a 6f 65 6c 69 62 32 2f 64 61 | lib2/molecule/Atom;...joelib2/da |
0bc0 | 74 61 2f 42 61 73 69 63 45 6c 65 6d 65 6e 74 48 6f 6c 64 65 72 01 00 23 28 29 4c 6a 6f 65 6c 69 | ta/BasicElementHolder..#()Ljoeli |
0be0 | 62 32 2f 64 61 74 61 2f 42 61 73 69 63 45 6c 65 6d 65 6e 74 48 6f 6c 64 65 72 3b 01 00 0c 67 65 | b2/data/BasicElementHolder;...ge |
0c00 | 74 41 74 6f 6d 69 63 4e 75 6d 01 00 15 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 41 74 | tAtomicNum...joelib2/molecule/At |
0c20 | 6f 6d 01 00 0f 73 65 74 41 74 6f 6d 69 63 4e 75 6d 62 65 72 01 00 10 6a 61 76 61 2f 6c 61 6e 67 | om...setAtomicNumber...java/lang |
0c40 | 2f 44 6f 75 62 6c 65 01 00 0b 70 61 72 73 65 44 6f 75 62 6c 65 01 00 15 28 4c 6a 61 76 61 2f 6c | /Double...parseDouble...(Ljava/l |
0c60 | 61 6e 67 2f 53 74 72 69 6e 67 3b 29 44 01 00 0b 73 65 74 43 6f 6f 72 64 73 33 44 01 00 06 28 44 | ang/String;)D...setCoords3D...(D |
0c80 | 44 44 29 56 01 00 09 74 72 61 6e 73 6c 61 74 65 01 00 26 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 | DD)V...translate..&(Ljava/lang/S |
0ca0 | 74 72 69 6e 67 3b 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 01 00 07 73 65 74 54 | tring;)Ljava/lang/String;...setT |
0cc0 | 79 70 65 01 00 11 6a 61 76 61 2f 6c 61 6e 67 2f 49 6e 74 65 67 65 72 01 00 08 70 61 72 73 65 49 | ype...java/lang/Integer...parseI |
0ce0 | 6e 74 01 00 0c 67 65 74 41 74 6f 6d 73 53 69 7a 65 01 00 0a 65 78 69 73 74 73 42 6f 6e 64 01 00 | nt...getAtomsSize...existsBond.. |
0d00 | 05 28 49 49 29 5a 01 00 07 61 64 64 42 6f 6e 64 01 00 06 28 49 49 49 29 5a 01 00 0a 67 65 74 4d | .(II)Z...addBond...(III)Z...getM |
0d20 | 65 73 73 61 67 65 01 00 09 65 6e 64 4d 6f 64 69 66 79 01 00 05 70 72 69 6e 74 01 00 08 67 65 74 | essage...endModify...print...get |
0d40 | 54 69 74 6c 65 01 00 04 28 43 29 56 01 00 07 70 72 69 6e 74 6c 6e 01 00 07 67 65 74 41 74 6f 6d | Title...(C)V...println...getAtom |
0d60 | 01 00 1a 28 49 29 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 41 74 6f 6d 3b 01 00 0f | ...(I)Ljoelib2/molecule/Atom;... |
0d80 | 67 65 74 41 74 6f 6d 69 63 4e 75 6d 62 65 72 01 00 09 67 65 74 53 79 6d 62 6f 6c 01 00 15 28 49 | getAtomicNumber...getSymbol...(I |
0da0 | 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 01 00 06 70 72 69 6e 74 66 01 00 2b 28 | )Ljava/lang/String;...printf..+( |
0dc0 | 4c 63 66 6f 72 6d 61 74 2f 50 72 69 6e 74 66 46 6f 72 6d 61 74 3b 4c 6a 61 76 61 2f 6c 61 6e 67 | Lcformat/PrintfFormat;Ljava/lang |
0de0 | 2f 53 74 72 69 6e 67 3b 29 56 01 00 06 67 65 74 33 44 78 01 00 03 28 29 44 01 00 1a 28 4c 63 66 | /String;)V...get3Dx...()D...(Lcf |
0e00 | 6f 72 6d 61 74 2f 50 72 69 6e 74 66 46 6f 72 6d 61 74 3b 44 29 56 01 00 06 67 65 74 33 44 79 01 | ormat/PrintfFormat;D)V...get3Dy. |
0e20 | 00 06 67 65 74 33 44 7a 01 00 31 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 74 79 70 65 73 | ..get3Dz..1joelib2/feature/types |
0e40 | 2f 61 74 6f 6d 6c 61 62 65 6c 2f 41 74 6f 6d 50 61 72 74 69 61 6c 43 68 61 72 67 65 01 00 10 67 | /atomlabel/AtomPartialCharge...g |
0e60 | 65 74 50 61 72 74 69 61 6c 43 68 61 72 67 65 01 00 1a 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 | etPartialCharge...(Ljoelib2/mole |
0e80 | 63 75 6c 65 2f 41 74 6f 6d 3b 29 44 01 00 0a 67 65 74 56 61 6c 65 6e 63 65 01 00 0c 62 6f 6e 64 | cule/Atom;)D...getValence...bond |
0ea0 | 49 74 65 72 61 74 6f 72 01 00 26 28 29 4c 6a 6f 65 6c 69 62 32 2f 75 74 69 6c 2f 69 74 65 72 61 | Iterator..&()Ljoelib2/util/itera |
0ec0 | 74 6f 72 2f 42 6f 6e 64 49 74 65 72 61 74 6f 72 3b 01 00 22 6a 6f 65 6c 69 62 32 2f 75 74 69 6c | tor/BondIterator;.."joelib2/util |
0ee0 | 2f 69 74 65 72 61 74 6f 72 2f 42 6f 6e 64 49 74 65 72 61 74 6f 72 01 00 07 68 61 73 4e 65 78 74 | /iterator/BondIterator...hasNext |
0f00 | 01 00 08 6e 65 78 74 42 6f 6e 64 01 00 19 28 29 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c | ...nextBond...()Ljoelib2/molecul |
0f20 | 65 2f 42 6f 6e 64 3b 01 00 15 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 42 6f 6e 64 01 | e/Bond;...joelib2/molecule/Bond. |
0f40 | 00 0c 67 65 74 42 6f 6e 64 4f 72 64 65 72 01 00 0b 67 65 74 4e 65 69 67 68 62 6f 72 01 00 30 28 | ..getBondOrder...getNeighbor..0( |
0f60 | 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 41 74 6f 6d 3b 29 4c 6a 6f 65 6c 69 62 32 | Ljoelib2/molecule/Atom;)Ljoelib2 |
0f80 | 2f 6d 6f 6c 65 63 75 6c 65 2f 41 74 6f 6d 3b 01 00 08 67 65 74 49 6e 64 65 78 01 00 0b 67 65 74 | /molecule/Atom;...getIndex...get |
0fa0 | 49 6e 73 74 61 6e 63 65 01 00 2f 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 4c | Instance../(Ljava/lang/String;)L |
0fc0 | 6f 72 67 2f 61 70 61 63 68 65 2f 6c 6f 67 34 6a 2f 43 61 74 65 67 6f 72 79 3b 00 21 00 70 00 71 | org/apache/log4j/Category;.!.p.q |
0fe0 | 00 01 00 72 00 07 00 0a 00 73 00 74 00 00 00 1a 00 75 00 76 00 01 00 77 00 00 00 02 00 18 00 1a | ...r.....s.t.....u.v...w........ |
1000 | 00 78 00 79 00 00 00 02 00 7a 00 7b 00 00 00 02 00 7c 00 7d 00 00 00 02 00 7e 00 7f 00 00 00 02 | .x.y.....z.{.....|.}.....~...... |
1020 | 00 80 00 81 00 00 00 13 00 01 00 82 00 83 00 01 00 84 00 00 00 43 00 03 00 01 00 00 00 37 2a b7 | .....................C.......7*. |
1040 | 00 01 2a 04 b5 00 02 2a 04 b5 00 03 b2 00 04 b6 00 05 99 00 22 b2 00 04 bb 00 06 59 b7 00 07 12 | ..*....*............"......Y.... |
1060 | 08 b6 00 09 2a b6 00 0a b6 00 0b b6 00 09 b6 00 0c b6 00 0d b1 00 00 00 00 00 01 00 85 00 83 00 | ....*........................... |
1080 | 02 00 84 00 00 00 14 00 01 00 01 00 00 00 08 2a b4 00 0e b6 00 0f b1 00 00 00 00 00 86 00 00 00 | ...............*................ |
10a0 | 04 00 01 00 87 00 01 00 88 00 83 00 02 00 84 00 00 00 14 00 01 00 01 00 00 00 08 2a b4 00 10 b6 | ...........................*.... |
10c0 | 00 11 b1 00 00 00 00 00 86 00 00 00 04 00 01 00 87 00 01 00 89 00 8a 00 02 00 84 00 00 00 20 00 | ................................ |
10e0 | 06 00 02 00 00 00 14 2a bb 00 12 59 bb 00 13 59 2b b7 00 14 b7 00 15 b5 00 0e b1 00 00 00 00 00 | .......*...Y...Y+............... |
1100 | 86 00 00 00 04 00 01 00 87 00 01 00 8b 00 8c 00 02 00 84 00 00 00 19 00 04 00 02 00 00 00 0d 2a | ...............................* |
1120 | bb 00 16 59 2b b7 00 17 b5 00 10 b1 00 00 00 00 00 86 00 00 00 04 00 01 00 87 00 01 00 8d 00 8e | ...Y+........................... |
1140 | 00 01 00 84 00 00 00 0f 00 01 00 01 00 00 00 03 12 18 b0 00 00 00 00 00 01 00 8f 00 90 00 01 00 | ................................ |
1160 | 84 00 00 00 10 00 01 00 01 00 00 00 04 b2 00 19 b0 00 00 00 00 00 01 00 91 00 8e 00 01 00 84 00 | ................................ |
1180 | 00 00 0f 00 01 00 01 00 00 00 03 12 18 b0 00 00 00 00 00 01 00 92 00 90 00 01 00 84 00 00 00 10 | ................................ |
11a0 | 00 01 00 01 00 00 00 04 b2 00 19 b0 00 00 00 00 00 01 00 93 00 8e 00 02 00 84 00 00 00 70 00 03 | .............................p.. |
11c0 | 00 04 00 00 00 64 bb 00 1a 59 11 27 10 b7 00 1b 4c 12 1c 4d 2a b4 00 0e b6 00 1d 59 4e c6 00 42 | .....d...Y.'....L..M*......YN..B |
11e0 | 2d b6 00 1e 9e 00 2a 2d 03 b6 00 1f 2c 03 b6 00 1f a0 00 1d 2d 2c b6 00 20 02 9f 00 14 2b 2d b6 | -.....*-....,.......-,.......+-. |
1200 | 00 21 57 2b b2 00 22 b6 00 21 57 a7 00 14 2b 2d b6 00 21 57 2b b2 00 22 b6 00 21 57 a7 ff b8 2d | .!W+.."..!W...+-..!W+.."..!W...- |
1220 | c7 00 05 01 b0 2b b6 00 23 b0 00 00 00 00 00 86 00 00 00 04 00 01 00 87 00 21 00 93 00 94 00 02 | .....+..#................!...... |
1240 | 00 84 00 00 00 13 00 03 00 02 00 00 00 07 2a 2b 01 b6 00 24 ac 00 00 00 00 00 86 00 00 00 06 00 | ..............*+...$............ |
1260 | 02 00 87 00 35 00 21 00 93 00 95 00 02 00 84 00 00 02 4d 00 07 00 11 00 00 02 39 bb 00 25 59 b7 | ....5.!...........M.......9..%Y. |
1280 | 00 26 3a 04 b8 00 27 12 28 b6 00 29 57 2a b4 00 0e b6 00 1d 59 4e c6 00 12 2d 12 2a b6 00 2b 9a | .&:...'.(..)W*......YN...-.*..+. |
12a0 | 00 09 2d c7 ff ea 03 ac 2d c7 00 05 03 ac 19 04 2d 12 2c b8 00 2d 57 19 04 b6 00 2e 05 a4 00 20 | ..-.....-.......-.,..-W......... |
12c0 | 2c c7 00 15 2b 19 04 05 b6 00 2f c0 00 30 b9 00 31 02 00 a7 00 0a 2b 2c b9 00 31 02 00 2b b9 00 | ,...+...../..0..1.....+,..1..+.. |
12e0 | 32 01 00 04 36 05 b8 00 27 12 33 b6 00 34 57 2a b4 00 0e b6 00 1d 59 4e c6 01 a6 2d 12 1c b6 00 | 2...6...'.3..4W*......YN...-.... |
1300 | 2b 9a 01 9d 2d c7 00 0d bb 00 35 59 12 36 b7 00 37 bf 19 04 2d 12 2c b8 00 2d 57 19 04 b6 00 2e | +...-.....5Y.6..7...-.,..-W..... |
1320 | 10 0b a3 00 29 2a b6 00 38 57 bb 00 35 59 bb 00 06 59 b7 00 07 12 39 b6 00 09 15 05 b6 00 3a 12 | ....)*..8W..5Y...Y....9.......:. |
1340 | 3b b6 00 09 b6 00 0c b7 00 37 bf 2b 04 b9 00 3c 02 00 3a 06 19 06 b8 00 3d 19 04 06 b6 00 2f c0 | ;........7.+...<..:.....=...../. |
1360 | 00 30 b6 00 3e b9 00 3f 02 00 19 04 10 06 b6 00 2f c0 00 30 b8 00 40 39 07 19 04 10 07 b6 00 2f | .0..>..?......../..0..@9......./ |
1380 | c0 00 30 b8 00 40 39 09 19 04 10 08 b6 00 2f c0 00 30 b8 00 40 39 0b 19 06 18 07 18 09 18 0b b9 | ..0..@9......./..0..@9.......... |
13a0 | 00 41 07 00 19 06 b8 00 27 19 04 06 b6 00 2f c0 00 30 b6 00 42 b9 00 43 02 00 10 0b 05 19 04 10 | .A......'...../..0..B..C........ |
13c0 | 0a b6 00 2f c0 00 30 b8 00 44 68 60 36 0e 10 0b 36 10 15 10 15 0e a2 00 8f 19 04 15 10 04 60 b6 | .../..0..Dh`6...6.............`. |
13e0 | 00 2f c0 00 30 03 b6 00 1f ab 00 00 00 00 42 00 00 00 04 00 00 00 61 00 00 00 3c 00 00 00 64 00 | ./..0.........B.......a...<...d. |
1400 | 00 00 30 00 00 00 73 00 00 00 2a 00 00 00 74 00 00 00 36 04 36 0d a7 00 18 05 36 0d a7 00 12 06 | ..0...s...*...t...6.6.....6..... |
1420 | 36 0d a7 00 0c 08 36 0d a7 00 06 04 36 0d 19 04 15 10 b6 00 2f c0 00 30 b8 00 44 36 0f 2b 15 0f | 6.....6.....6......./..0..D6.+.. |
1440 | 2b b9 00 45 01 00 b9 00 46 03 00 9a 00 14 2b 2b b9 00 45 01 00 15 0f 15 0d b9 00 47 04 00 57 84 | +..E....F.....++..E........G..W. |
1460 | 10 02 a7 ff 70 a7 00 33 3a 10 2a b6 00 38 57 bb 00 35 59 bb 00 06 59 b7 00 07 12 49 b6 00 09 15 | ....p..3:.*..8W..5Y...Y....I.... |
1480 | 05 b6 00 3a 12 4a b6 00 09 19 10 b6 00 4b b6 00 09 b6 00 0c b7 00 37 bf 84 05 01 a7 fe 54 2d c7 | ...:.J.......K........7......T-. |
14a0 | 00 0d bb 00 35 59 12 36 b7 00 37 bf 2b b9 00 4c 01 00 04 ac 00 01 00 d0 01 ea 01 ed 00 48 00 00 | ....5Y.6..7.+..L.............H.. |
14c0 | 00 86 00 00 00 06 00 02 00 87 00 35 00 01 00 96 00 97 00 01 00 84 00 00 00 0e 00 01 00 01 00 00 | ...........5.................... |
14e0 | 00 02 04 ac 00 00 00 00 00 01 00 98 00 83 00 01 00 84 00 00 00 12 00 02 00 01 00 00 00 06 2a 04 | ..............................*. |
1500 | b5 00 03 b1 00 00 00 00 00 01 00 99 00 97 00 02 00 84 00 00 00 38 00 02 00 02 00 00 00 2c 2a b4 | .....................8.......,*. |
1520 | 00 0e b6 00 1d 59 4c c6 00 21 2b b6 00 1e 9e ff f0 2b 03 b6 00 1f 10 65 a0 ff e6 2b 12 1c b6 00 | .....YL..!+......+.....e...+.... |
1540 | 20 02 9f ff dc a7 00 03 04 ac 00 00 00 00 00 86 00 00 00 04 00 01 00 87 00 01 00 9a 00 94 00 02 | ................................ |
1560 | 00 84 00 00 00 13 00 03 00 02 00 00 00 07 2a 2b 01 b6 00 4d ac 00 00 00 00 00 86 00 00 00 04 00 | ..............*+...M............ |
1580 | 01 00 87 00 01 00 9a 00 95 00 02 00 84 00 00 02 51 00 04 00 0a 00 00 02 45 bb 00 4e 59 12 4f b7 | ................Q.......E..NY.O. |
15a0 | 00 50 3a 04 bb 00 4e 59 12 51 b7 00 50 3a 05 2a b4 00 10 12 52 b6 00 53 2a b4 00 10 2a b4 00 03 | .P:...NY.Q..P:.*....R..S*...*... |
15c0 | b6 00 54 2a b4 00 10 12 55 b6 00 53 2c c7 00 13 2a b4 00 10 2b b9 00 56 01 00 b6 00 53 a7 00 0b | ..T*....U..S,...*...+..V....S... |
15e0 | 2a b4 00 10 2c b6 00 53 2a b4 00 02 99 00 0f 2a b4 00 10 10 0a b6 00 57 a7 00 0a 2a b4 00 10 b6 | *...,..S*......*.......W...*.... |
1600 | 00 58 b8 00 27 12 33 b6 00 29 57 b8 00 27 12 28 b6 00 34 57 04 3e 1d 2b b9 00 45 01 00 a3 01 87 | .X..'.3..)W..'.(..4W.>.+..E..... |
1620 | 2b 1d b9 00 59 02 00 3a 06 2a b4 00 10 12 5a b6 00 53 2a b4 00 10 1d b6 00 54 2a b4 00 10 12 5b | +...Y..:.*....Z..S*......T*....[ |
1640 | b6 00 53 2a b4 00 10 19 05 b8 00 3d 19 06 b9 00 5c 01 00 b6 00 5d b6 00 5e 2a b4 00 10 12 5f b6 | ..S*.......=....\....]..^*...._. |
1660 | 00 53 2a b4 00 10 19 04 19 06 b9 00 60 01 00 b6 00 61 2a b4 00 10 10 20 b6 00 57 2a b4 00 10 19 | .S*.........`....a*.......W*.... |
1680 | 04 19 06 b9 00 62 01 00 b6 00 61 2a b4 00 10 10 20 b6 00 57 2a b4 00 10 10 20 b6 00 57 2a b4 00 | .....b....a*.......W*.......W*.. |
16a0 | 10 19 04 19 06 b9 00 63 01 00 b6 00 61 2a b4 00 10 10 20 b6 00 57 2a b4 00 10 10 20 b6 00 57 2a | .......c....a*.......W*.......W* |
16c0 | b4 00 10 19 04 19 06 b8 00 64 b6 00 61 2a b4 00 10 10 20 b6 00 57 2a b4 00 10 19 06 b9 00 65 01 | .........d..a*.......W*.......e. |
16e0 | 00 b6 00 54 2a b4 00 10 10 20 b6 00 57 19 06 b9 00 66 01 00 3a 07 19 07 b9 00 67 01 00 99 00 87 | ...T*.......W....f..:.....g..... |
1700 | 19 07 b9 00 68 01 00 3a 08 19 08 b9 00 69 01 00 aa 00 00 00 3d 00 00 00 01 00 00 00 05 00 00 00 | ....h..:.....i......=........... |
1720 | 21 00 00 00 28 00 00 00 2f 00 00 00 3d 00 00 00 36 10 73 36 09 a7 00 1c 10 64 36 09 a7 00 15 10 | !...(.../...=...6.s6.....d6..... |
1740 | 74 36 09 a7 00 0e 10 61 36 09 a7 00 07 10 73 36 09 2a b4 00 10 19 08 19 06 b9 00 6a 02 00 b9 00 | t6.....a6.....s6.*.........j.... |
1760 | 6b 01 00 b6 00 54 2a b4 00 10 10 20 b6 00 57 2a b4 00 10 15 09 b6 00 57 2a b4 00 10 10 20 b6 00 | k....T*.......W*.......W*....... |
1780 | 57 a7 ff 75 2a b4 00 02 99 00 0f 2a b4 00 10 10 0a b6 00 57 a7 00 0a 2a b4 00 10 b6 00 58 84 03 | W..u*......*.......W...*.....X.. |
17a0 | 01 a7 fe 75 2a b4 00 10 12 6c b6 00 53 2a b4 00 10 2a b4 00 03 b6 00 54 2a b4 00 02 99 00 0f 2a | ...u*....l..S*...*.....T*......* |
17c0 | b4 00 10 10 0a b6 00 57 a7 00 0a 2a b4 00 10 b6 00 58 2a 59 b4 00 03 04 60 b5 00 03 04 ac 00 00 | .......W...*.....X*Y....`....... |
17e0 | 00 00 00 86 00 00 00 04 00 01 00 87 00 01 00 9b 00 97 00 01 00 84 00 00 00 0e 00 01 00 01 00 00 | ................................ |
1800 | 00 02 04 ac 00 00 00 00 00 08 00 9c 00 83 00 01 00 84 00 00 00 21 00 04 00 00 00 00 00 15 12 6d | .....................!.........m |
1820 | b8 00 6e b3 00 04 04 bd 00 30 59 03 12 6f 53 b3 00 19 b1 00 00 00 00 00 00 | ..n......0Y..oS.......... |