ofs | hex dump | ascii |
---|
0000 | ca fe ba be 00 00 00 31 00 a2 07 00 9f 07 00 a0 07 00 a1 01 00 0c 61 64 64 41 74 6f 6d 43 6c 6f | .......1..............addAtomClo |
0020 | 6e 65 01 00 1a 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 41 74 6f 6d 3b 29 5a 01 | ne...(Ljoelib2/molecule/Atom;)Z. |
0040 | 00 07 61 64 64 42 6f 6e 64 01 00 06 28 49 49 49 29 5a 01 00 07 28 49 49 49 49 29 5a 01 00 08 28 | ..addBond...(III)Z...(IIII)Z...( |
0060 | 49 49 49 49 49 29 5a 01 00 0c 61 64 64 42 6f 6e 64 43 6c 6f 6e 65 01 00 1a 28 4c 6a 6f 65 6c 69 | IIIII)Z...addBondClone...(Ljoeli |
0080 | 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 42 6f 6e 64 3b 29 5a 01 00 07 61 64 64 44 61 74 61 01 00 24 | b2/molecule/Bond;)Z...addData..$ |
00a0 | 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 74 79 70 65 73 2f 50 61 69 72 44 61 74 | (Ljoelib2/molecule/types/PairDat |
00c0 | 61 3b 29 56 01 00 25 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 74 79 70 65 73 2f | a;)V..%(Ljoelib2/molecule/types/ |
00e0 | 50 61 69 72 44 61 74 61 3b 5a 29 56 01 00 0c 61 64 64 48 79 64 72 6f 67 65 6e 73 01 00 03 28 29 | PairData;Z)V...addHydrogens...() |
0100 | 5a 01 00 04 28 5a 29 5a 01 00 05 28 5a 5a 29 5a 01 00 06 28 5a 5a 5a 29 5a 01 00 11 61 64 64 50 | Z...(Z)Z...(ZZ)Z...(ZZZ)Z...addP |
0120 | 6f 6c 61 72 48 79 64 72 6f 67 65 6e 73 01 00 0a 61 64 64 52 65 73 69 64 75 65 01 00 23 28 4c 6a | olarHydrogens...addResidue..#(Lj |
0140 | 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 74 79 70 65 73 2f 52 65 73 69 64 75 65 3b 29 5a | oelib2/molecule/types/Residue;)Z |
0160 | 01 00 05 61 6c 69 67 6e 01 00 5f 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 41 74 | ...align.._(Ljoelib2/molecule/At |
0180 | 6f 6d 3b 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 41 74 6f 6d 3b 4c 6a 6f 65 6c 69 | om;Ljoelib2/molecule/Atom;Ljoeli |
01a0 | 62 32 2f 6d 61 74 68 2f 56 65 63 74 6f 72 33 44 3b 4c 6a 6f 65 6c 69 62 32 2f 6d 61 74 68 2f 56 | b2/math/Vector3D;Ljoelib2/math/V |
01c0 | 65 63 74 6f 72 33 44 3b 29 56 01 00 0c 61 74 6f 6d 49 74 65 72 61 74 6f 72 01 00 26 28 29 4c 6a | ector3D;)V...atomIterator..&()Lj |
01e0 | 6f 65 6c 69 62 32 2f 75 74 69 6c 2f 69 74 65 72 61 74 6f 72 2f 41 74 6f 6d 49 74 65 72 61 74 6f | oelib2/util/iterator/AtomIterato |
0200 | 72 3b 01 00 0b 62 65 67 69 6e 4d 6f 64 69 66 79 01 00 03 28 29 56 01 00 0c 62 6f 6e 64 49 74 65 | r;...beginModify...()V...bondIte |
0220 | 72 61 74 6f 72 01 00 26 28 29 4c 6a 6f 65 6c 69 62 32 2f 75 74 69 6c 2f 69 74 65 72 61 74 6f 72 | rator..&()Ljoelib2/util/iterator |
0240 | 2f 42 6f 6e 64 49 74 65 72 61 74 6f 72 3b 01 00 05 63 6c 65 61 72 01 00 05 63 6c 6f 6e 65 01 00 | /BondIterator;...clear...clone.. |
0260 | 14 28 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 4f 62 6a 65 63 74 3b 01 00 15 28 5a 29 4c 6a 61 76 61 | .()Ljava/lang/Object;...(Z)Ljava |
0280 | 2f 6c 61 6e 67 2f 4f 62 6a 65 63 74 3b 01 00 28 28 5a 5b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 | /lang/Object;..((Z[Ljava/lang/St |
02a0 | 72 69 6e 67 3b 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 4f 62 6a 65 63 74 3b 01 00 0c 64 65 63 72 65 | ring;)Ljava/lang/Object;...decre |
02c0 | 6d 65 6e 74 4d 6f 64 01 00 0a 64 65 6c 65 74 65 41 74 6f 6d 01 00 0a 64 65 6c 65 74 65 42 6f 6e | mentMod...deleteAtom...deleteBon |
02e0 | 64 01 00 0a 64 65 6c 65 74 65 44 61 74 61 01 00 15 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 | d...deleteData...(Ljava/lang/Str |
0300 | 69 6e 67 3b 29 5a 01 00 13 28 4c 6a 61 76 61 2f 75 74 69 6c 2f 4c 69 73 74 3b 29 56 01 00 0e 64 | ing;)Z...(Ljava/util/List;)V...d |
0320 | 65 6c 65 74 65 48 79 64 72 6f 67 65 6e 01 00 0f 64 65 6c 65 74 65 48 79 64 72 6f 67 65 6e 73 01 | eleteHydrogen...deleteHydrogens. |
0340 | 00 17 64 65 6c 65 74 65 4e 6f 6e 50 6f 6c 61 72 48 79 64 72 6f 67 65 6e 73 01 00 0d 64 65 6c 65 | ..deleteNonPolarHydrogens...dele |
0360 | 74 65 52 65 73 69 64 75 65 01 00 09 65 6e 64 4d 6f 64 69 66 79 01 00 04 28 5a 29 56 01 00 05 28 | teResidue...endModify...(Z)V...( |
0380 | 5a 5a 29 56 01 00 06 65 71 75 61 6c 73 01 00 15 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 4f 62 6a 65 | ZZ)V...equals...(Ljava/lang/Obje |
03a0 | 63 74 3b 29 5a 01 00 1e 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 | ct;)Z...(Ljoelib2/molecule/Molec |
03c0 | 75 6c 65 3b 29 5a 01 00 0a 65 78 69 73 74 73 42 6f 6e 64 01 00 05 28 49 49 29 5a 01 00 0c 66 69 | ule;)Z...existsBond...(II)Z...fi |
03e0 | 6e 64 43 68 69 6c 64 72 65 6e 01 00 15 28 4c 6a 61 76 61 2f 75 74 69 6c 2f 4c 69 73 74 3b 49 49 | ndChildren...(Ljava/util/List;II |
0400 | 29 56 01 00 09 53 69 67 6e 61 74 75 72 65 01 00 2e 28 4c 6a 61 76 61 2f 75 74 69 6c 2f 4c 69 73 | )V...Signature...(Ljava/util/Lis |
0420 | 74 3c 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 41 74 6f 6d 3b 3e 3b 49 49 29 56 01 | t<Ljoelib2/molecule/Atom;>;II)V. |
0440 | 00 41 28 4c 6a 61 76 61 2f 75 74 69 6c 2f 4c 69 73 74 3b 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 | .A(Ljava/util/List;Ljoelib2/mole |
0460 | 63 75 6c 65 2f 41 74 6f 6d 3b 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 41 74 6f 6d | cule/Atom;Ljoelib2/molecule/Atom |
0480 | 3b 29 56 01 00 5a 28 4c 6a 61 76 61 2f 75 74 69 6c 2f 4c 69 73 74 3c 4c 6a 6f 65 6c 69 62 32 2f | ;)V..Z(Ljava/util/List<Ljoelib2/ |
04a0 | 6d 6f 6c 65 63 75 6c 65 2f 41 74 6f 6d 3b 3e 3b 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c | molecule/Atom;>;Ljoelib2/molecul |
04c0 | 65 2f 41 74 6f 6d 3b 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 41 74 6f 6d 3b 29 56 | e/Atom;Ljoelib2/molecule/Atom;)V |
04e0 | 01 00 13 66 69 6e 64 4c 61 72 67 65 73 74 46 72 61 67 6d 65 6e 74 01 00 1b 28 4c 6a 6f 65 6c 69 | ...findLargestFragment...(Ljoeli |
0500 | 62 32 2f 75 74 69 6c 2f 42 69 74 56 65 63 74 6f 72 3b 29 56 01 00 13 67 65 6e 65 72 69 63 44 61 | b2/util/BitVector;)V...genericDa |
0520 | 74 61 49 74 65 72 61 74 6f 72 01 00 2a 28 29 4c 6a 6f 65 6c 69 62 32 2f 75 74 69 6c 2f 69 74 65 | taIterator..*()Ljoelib2/util/ite |
0540 | 72 61 74 6f 72 2f 50 61 69 72 44 61 74 61 49 74 65 72 61 74 6f 72 3b 01 00 07 67 65 74 41 74 6f | rator/PairDataIterator;...getAto |
0560 | 6d 01 00 1a 28 49 29 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 41 74 6f 6d 3b 01 00 | m...(I)Ljoelib2/molecule/Atom;.. |
0580 | 08 67 65 74 41 74 6f 6d 73 01 00 12 28 29 4c 6a 61 76 61 2f 75 74 69 6c 2f 4c 69 73 74 3b 01 00 | .getAtoms...()Ljava/util/List;.. |
05a0 | 2b 28 29 4c 6a 61 76 61 2f 75 74 69 6c 2f 4c 69 73 74 3c 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 | +()Ljava/util/List<Ljoelib2/mole |
05c0 | 63 75 6c 65 2f 41 74 6f 6d 3b 3e 3b 01 00 0c 67 65 74 41 74 6f 6d 73 53 69 7a 65 01 00 03 28 29 | cule/Atom;>;...getAtomsSize...() |
05e0 | 49 01 00 07 67 65 74 42 6f 6e 64 01 00 1a 28 49 29 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 | I...getBond...(I)Ljoelib2/molecu |
0600 | 6c 65 2f 42 6f 6e 64 3b 01 00 1b 28 49 49 29 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 | le/Bond;...(II)Ljoelib2/molecule |
0620 | 2f 42 6f 6e 64 3b 01 00 47 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 41 74 6f 6d | /Bond;..G(Ljoelib2/molecule/Atom |
0640 | 3b 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 41 74 6f 6d 3b 29 4c 6a 6f 65 6c 69 62 | ;Ljoelib2/molecule/Atom;)Ljoelib |
0660 | 32 2f 6d 6f 6c 65 63 75 6c 65 2f 42 6f 6e 64 3b 01 00 08 67 65 74 42 6f 6e 64 73 01 00 0c 67 65 | 2/molecule/Bond;...getBonds...ge |
0680 | 74 42 6f 6e 64 73 53 69 7a 65 01 00 07 67 65 74 44 61 74 61 01 00 35 28 4c 6a 61 76 61 2f 6c 61 | tBondsSize...getData..5(Ljava/la |
06a0 | 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 74 79 70 | ng/String;)Ljoelib2/molecule/typ |
06c0 | 65 73 2f 50 61 69 72 44 61 74 61 3b 01 00 36 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e | es/PairData;..6(Ljava/lang/Strin |
06e0 | 67 3b 5a 29 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 74 79 70 65 73 2f 50 61 69 72 | g;Z)Ljoelib2/molecule/types/Pair |
0700 | 44 61 74 61 3b 01 00 0b 67 65 74 44 61 74 61 53 69 7a 65 01 00 0f 67 65 74 44 65 70 72 6f 74 6f | Data;...getDataSize...getDeproto |
0720 | 6e 61 74 65 64 01 00 1d 28 29 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 | nated...()Ljoelib2/molecule/Mole |
0740 | 63 75 6c 65 3b 01 00 09 67 65 74 45 6e 65 72 67 79 01 00 03 28 29 44 01 00 0c 67 65 74 46 69 72 | cule;...getEnergy...()D...getFir |
0760 | 73 74 41 74 6f 6d 01 00 19 28 29 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 41 74 6f | stAtom...()Ljoelib2/molecule/Ato |
0780 | 6d 3b 01 00 08 67 65 74 46 6c 61 67 73 01 00 13 67 65 74 48 65 61 76 79 41 74 6f 6d 73 4e 75 6d | m;...getFlags...getHeavyAtomsNum |
07a0 | 62 65 72 01 00 0c 67 65 74 49 6e 70 75 74 54 79 70 65 01 00 15 28 29 4c 6a 6f 65 6c 69 62 32 2f | ber...getInputType...()Ljoelib2/ |
07c0 | 69 6f 2f 49 4f 54 79 70 65 3b 01 00 16 67 65 74 4d 6f 64 69 66 69 63 61 74 69 6f 6e 43 6f 75 6e | io/IOType;...getModificationCoun |
07e0 | 74 65 72 01 00 0d 67 65 74 4f 75 74 70 75 74 54 79 70 65 01 00 16 67 65 74 50 61 72 74 69 61 6c | ter...getOutputType...getPartial |
0800 | 43 68 61 72 67 65 56 65 6e 64 6f 72 01 00 14 28 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 | ChargeVendor...()Ljava/lang/Stri |
0820 | 6e 67 3b 01 00 0a 67 65 74 52 65 73 69 64 75 65 01 00 23 28 49 29 4c 6a 6f 65 6c 69 62 32 2f 6d | ng;...getResidue..#(I)Ljoelib2/m |
0840 | 6f 6c 65 63 75 6c 65 2f 74 79 70 65 73 2f 52 65 73 69 64 75 65 3b 01 00 0f 67 65 74 52 65 73 69 | olecule/types/Residue;...getResi |
0860 | 64 75 65 73 53 69 7a 65 01 00 0f 67 65 74 52 69 6e 67 49 74 65 72 61 74 6f 72 01 00 26 28 29 4c | duesSize...getRingIterator..&()L |
0880 | 6a 6f 65 6c 69 62 32 2f 75 74 69 6c 2f 69 74 65 72 61 74 6f 72 2f 52 69 6e 67 49 74 65 72 61 74 | joelib2/util/iterator/RingIterat |
08a0 | 6f 72 3b 01 00 0d 67 65 74 52 6f 74 6f 72 73 53 69 7a 65 01 00 07 67 65 74 53 53 53 52 01 00 08 | or;...getRotorsSize...getSSSR... |
08c0 | 67 65 74 54 69 74 6c 65 01 00 05 68 61 73 32 44 01 00 05 68 61 73 33 44 01 00 14 68 61 73 41 72 | getTitle...has2D...has3D...hasAr |
08e0 | 6f 6d 61 74 69 63 43 6f 72 72 65 63 74 65 64 01 00 12 68 61 73 43 68 61 69 6e 73 50 65 72 63 65 | omaticCorrected...hasChainsPerce |
0900 | 69 76 65 64 01 00 07 68 61 73 44 61 74 61 01 00 08 68 61 73 68 43 6f 64 65 01 00 11 68 61 73 48 | ived...hasData...hashCode...hasH |
0920 | 79 64 72 6f 67 65 6e 73 41 64 64 65 64 01 00 10 68 61 73 4e 6f 6e 5a 65 72 6f 43 6f 6f 72 64 73 | ydrogensAdded...hasNonZeroCoords |
0940 | 01 00 0c 69 6e 63 72 65 6d 65 6e 74 4d 6f 64 01 00 0a 69 6e 73 65 72 74 41 74 6f 6d 01 00 14 69 | ...incrementMod...insertAtom...i |
0960 | 73 41 73 73 69 67 6e 46 6f 72 6d 61 6c 43 68 61 72 67 65 01 00 15 69 73 41 73 73 69 67 6e 50 61 | sAssignFormalCharge...isAssignPa |
0980 | 72 74 69 61 6c 43 68 61 72 67 65 01 00 08 69 73 43 68 69 72 61 6c 01 00 10 69 73 43 6f 72 72 65 | rtialCharge...isChiral...isCorre |
09a0 | 63 74 65 64 46 6f 72 50 48 01 00 07 69 73 45 6d 70 74 79 01 00 11 69 73 4d 6f 6c 65 63 75 6c 65 | ctedForPH...isEmpty...isMolecule |
09c0 | 48 61 73 68 69 6e 67 01 00 08 6b 65 6b 75 6c 69 7a 65 01 00 13 6e 61 74 69 76 65 56 61 6c 75 65 | Hashing...kekulize...nativeValue |
09e0 | 49 74 65 72 61 74 6f 72 01 00 2d 28 29 4c 6a 6f 65 6c 69 62 32 2f 75 74 69 6c 2f 69 74 65 72 61 | Iterator..-()Ljoelib2/util/itera |
0a00 | 74 6f 72 2f 4e 61 74 69 76 65 56 61 6c 75 65 49 74 65 72 61 74 6f 72 3b 01 00 07 6e 65 77 41 74 | tor/NativeValueIterator;...newAt |
0a20 | 6f 6d 01 00 1a 28 5a 29 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 41 74 6f 6d 3b 01 | om...(Z)Ljoelib2/molecule/Atom;. |
0a40 | 00 07 6e 65 77 42 6f 6e 64 01 00 19 28 29 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f | ..newBond...()Ljoelib2/molecule/ |
0a60 | 42 6f 6e 64 3b 01 00 0a 6e 65 77 52 65 73 69 64 75 65 01 00 22 28 29 4c 6a 6f 65 6c 69 62 32 2f | Bond;...newResidue.."()Ljoelib2/ |
0a80 | 6d 6f 6c 65 63 75 6c 65 2f 74 79 70 65 73 2f 52 65 73 69 64 75 65 3b 01 00 06 72 65 48 61 73 68 | molecule/types/Residue;...reHash |
0aa0 | 01 00 0d 72 65 6e 75 6d 62 65 72 41 74 6f 6d 73 01 00 2c 28 4c 6a 61 76 61 2f 75 74 69 6c 2f 4c | ...renumberAtoms..,(Ljava/util/L |
0ac0 | 69 73 74 3c 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 41 74 6f 6d 3b 3e 3b 29 56 01 | ist<Ljoelib2/molecule/Atom;>;)V. |
0ae0 | 00 0c 72 65 73 65 72 76 65 41 74 6f 6d 73 01 00 04 28 49 29 56 01 00 0f 72 65 73 69 64 75 65 49 | ..reserveAtoms...(I)V...residueI |
0b00 | 74 65 72 61 74 6f 72 01 00 29 28 29 4c 6a 6f 65 6c 69 62 32 2f 75 74 69 6c 2f 69 74 65 72 61 74 | terator..)()Ljoelib2/util/iterat |
0b20 | 6f 72 2f 52 65 73 69 64 75 65 49 74 65 72 61 74 6f 72 3b 01 00 03 73 65 74 01 00 38 28 4c 6a 6f | or/ResidueIterator;...set..8(Ljo |
0b40 | 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 29 4c 6a 6f 65 6c 69 62 | elib2/molecule/Molecule;)Ljoelib |
0b60 | 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 01 00 4c 28 4c 6a 6f 65 6c 69 62 32 | 2/molecule/Molecule;..L(Ljoelib2 |
0b80 | 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 5a 5b 4c 6a 61 76 61 2f 6c 61 6e 67 2f | /molecule/Molecule;Z[Ljava/lang/ |
0ba0 | 53 74 72 69 6e 67 3b 29 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 | String;)Ljoelib2/molecule/Molecu |
0bc0 | 6c 65 3b 01 00 4d 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c | le;..M(Ljoelib2/molecule/Molecul |
0be0 | 65 3b 5a 5b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 5a 29 4c 6a 6f 65 6c 69 62 32 | e;Z[Ljava/lang/String;Z)Ljoelib2 |
0c00 | 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 01 00 06 73 65 74 41 64 64 01 00 14 73 | /molecule/Molecule;...setAdd...s |
0c20 | 65 74 41 72 6f 6d 61 74 69 63 43 6f 72 72 65 63 74 65 64 01 00 15 73 65 74 41 73 73 69 67 6e 46 | etAromaticCorrected...setAssignF |
0c40 | 6f 72 6d 61 6c 43 68 61 72 67 65 01 00 16 73 65 74 41 73 73 69 67 6e 50 61 72 74 69 61 6c 43 68 | ormalCharge...setAssignPartialCh |
0c60 | 61 72 67 65 01 00 12 73 65 74 43 68 61 69 6e 73 50 65 72 63 65 69 76 65 64 01 00 11 73 65 74 43 | arge...setChainsPerceived...setC |
0c80 | 6f 72 72 65 63 74 65 64 46 6f 72 50 48 01 00 09 73 65 74 45 6e 65 72 67 79 01 00 04 28 44 29 56 | orrectedForPH...setEnergy...(D)V |
0ca0 | 01 00 11 73 65 74 48 79 64 72 6f 67 65 6e 73 41 64 64 65 64 01 00 0c 73 65 74 49 6e 70 75 74 54 | ...setHydrogensAdded...setInputT |
0cc0 | 79 70 65 01 00 16 28 4c 6a 6f 65 6c 69 62 32 2f 69 6f 2f 49 4f 54 79 70 65 3b 29 56 01 00 12 73 | ype...(Ljoelib2/io/IOType;)V...s |
0ce0 | 65 74 4d 6f 6c 65 63 75 6c 65 48 61 73 68 69 6e 67 01 00 0d 73 65 74 4f 75 74 70 75 74 54 79 70 | etMoleculeHashing...setOutputTyp |
0d00 | 65 01 00 16 73 65 74 50 61 72 74 69 61 6c 43 68 61 72 67 65 56 65 6e 64 6f 72 01 00 15 28 4c 6a | e...setPartialChargeVendor...(Lj |
0d20 | 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 56 01 00 08 73 65 74 54 69 74 6c 65 01 00 08 | ava/lang/String;)V...setTitle... |
0d40 | 74 6f 53 74 72 69 6e 67 01 00 27 28 4c 6a 6f 65 6c 69 62 32 2f 69 6f 2f 49 4f 54 79 70 65 3b 29 | toString..'(Ljoelib2/io/IOType;) |
0d60 | 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 01 00 15 28 5a 29 4c 6a 61 76 61 2f 6c 61 | Ljava/lang/String;...(Z)Ljava/la |
0d80 | 6e 67 2f 53 74 72 69 6e 67 3b 01 00 28 28 4c 6a 6f 65 6c 69 62 32 2f 69 6f 2f 49 4f 54 79 70 65 | ng/String;..((Ljoelib2/io/IOType |
0da0 | 3b 5a 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 01 00 19 6a 6f 65 6c 69 62 32 2f | ;Z)Ljava/lang/String;...joelib2/ |
0dc0 | 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 01 00 10 6a 61 76 61 2f 6c 61 6e 67 2f 4f 62 | molecule/Molecule...java/lang/Ob |
0de0 | 6a 65 63 74 01 00 16 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 47 72 61 70 68 06 01 00 | ject...joelib2/molecule/Graph... |
0e00 | 01 00 02 00 01 00 03 00 00 00 73 04 01 00 04 00 05 00 00 04 01 00 06 00 07 00 00 04 01 00 06 00 | ..........s..................... |
0e20 | 08 00 00 04 01 00 06 00 09 00 00 04 01 00 0a 00 0b 00 00 04 01 00 0c 00 0d 00 00 04 01 00 0c 00 | ................................ |
0e40 | 0e 00 00 04 01 00 0f 00 10 00 00 04 01 00 0f 00 11 00 00 04 01 00 0f 00 05 00 00 04 01 00 0f 00 | ................................ |
0e60 | 12 00 00 04 01 00 0f 00 13 00 00 04 01 00 14 00 10 00 00 04 01 00 15 00 16 00 00 04 01 00 17 00 | ................................ |
0e80 | 18 00 00 04 01 00 19 00 1a 00 00 04 01 00 1b 00 1c 00 00 04 01 00 1d 00 1e 00 00 04 01 00 1f 00 | ................................ |
0ea0 | 10 00 00 04 01 00 20 00 21 00 00 04 01 00 20 00 22 00 00 04 01 00 20 00 23 00 00 04 01 00 24 00 | ........!.......".......#.....$. |
0ec0 | 1c 00 00 04 01 00 25 00 05 00 00 04 01 00 26 00 0b 00 00 04 01 00 27 00 28 00 00 04 01 00 27 00 | ......%.......&.......'.(.....'. |
0ee0 | 0d 00 00 04 01 00 27 00 29 00 00 04 01 00 2a 00 05 00 00 04 01 00 2b 00 10 00 00 04 01 00 2b 00 | ......'.).....*.......+.......+. |
0f00 | 05 00 00 04 01 00 2c 00 10 00 00 04 01 00 2d 00 16 00 00 04 01 00 2e 00 1c 00 00 04 01 00 2e 00 | ......,.......-................. |
0f20 | 2f 00 00 04 01 00 2e 00 30 00 00 04 01 00 31 00 32 00 00 04 01 00 31 00 33 00 00 04 01 00 34 00 | /.......0.....1.2.....1.3.....4. |
0f40 | 35 00 00 04 01 00 36 00 37 00 01 00 38 00 00 00 02 00 39 04 01 00 36 00 3a 00 01 00 38 00 00 00 | 5.....6.7...8.....9...6.:...8... |
0f60 | 02 00 3b 04 01 00 3c 00 3d 00 00 04 01 00 3e 00 3f 00 00 04 01 00 40 00 41 00 00 04 01 00 42 00 | ..;...<.=.....>.?.....@.A.....B. |
0f80 | 43 00 01 00 38 00 00 00 02 00 44 04 01 00 45 00 46 00 00 04 01 00 47 00 48 00 00 04 01 00 47 00 | C...8.....D...E.F.....G.H.....G. |
0fa0 | 49 00 00 04 01 00 47 00 4a 00 00 04 01 00 4b 00 43 00 00 04 01 00 4c 00 46 00 00 04 01 00 4d 00 | I.....G.J.....K.C.....L.F.....M. |
0fc0 | 4e 00 00 04 01 00 4d 00 4f 00 00 04 01 00 50 00 46 00 00 04 01 00 51 00 52 00 00 04 01 00 53 00 | N.....M.O.....P.F.....Q.R.....S. |
0fe0 | 54 00 00 04 01 00 55 00 56 00 00 04 01 00 57 00 46 00 00 04 01 00 58 00 46 00 00 04 01 00 59 00 | T.....U.V.....W.F.....X.F.....Y. |
1000 | 5a 00 00 04 01 00 5b 00 46 00 00 04 01 00 5c 00 5a 00 00 04 01 00 5d 00 5e 00 00 04 01 00 5f 00 | Z.....[.F.....\.Z.....].^....._. |
1020 | 60 00 00 04 01 00 61 00 46 00 00 04 01 00 62 00 63 00 00 04 01 00 64 00 46 00 00 04 01 00 65 00 | `.....a.F.....b.c.....d.F.....e. |
1040 | 43 00 00 04 01 00 66 00 5e 00 00 04 01 00 67 00 10 00 00 04 01 00 68 00 10 00 00 04 01 00 69 00 | C.....f.^.....g.......h.......i. |
1060 | 10 00 00 04 01 00 6a 00 10 00 00 04 01 00 6b 00 28 00 00 04 01 00 6c 00 46 00 00 04 01 00 6d 00 | ......j.......k.(.....l.F.....m. |
1080 | 10 00 00 04 01 00 6e 00 10 00 00 04 01 00 6f 00 1c 00 00 04 01 00 70 00 05 00 00 04 01 00 71 00 | ......n.......o.......p.......q. |
10a0 | 10 00 00 04 01 00 72 00 10 00 00 04 01 00 73 00 10 00 00 04 01 00 74 00 10 00 00 04 01 00 75 00 | ......r.......s.......t.......u. |
10c0 | 10 00 00 04 01 00 76 00 10 00 00 04 01 00 77 00 10 00 00 04 01 00 78 00 79 00 00 04 01 00 7a 00 | ......v.......w.......x.y.....z. |
10e0 | 56 00 00 04 01 00 7a 00 7b 00 00 04 01 00 7c 00 7d 00 00 04 01 00 7e 00 7f 00 00 04 01 00 80 00 | V.....z.{.....|.}.....~......... |
1100 | 46 00 00 04 01 00 81 00 29 00 01 00 38 00 00 00 02 00 82 04 01 00 83 00 84 00 00 04 01 00 85 00 | F.......)...8................... |
1120 | 86 00 00 04 01 00 87 00 88 00 00 04 01 00 87 00 89 00 00 04 01 00 87 00 8a 00 00 04 01 00 8b 00 | ................................ |
1140 | 88 00 00 04 01 00 8c 00 1c 00 00 04 01 00 8d 00 2f 00 00 04 01 00 8e 00 2f 00 00 04 01 00 8f 00 | ................/......./....... |
1160 | 1c 00 00 04 01 00 90 00 1c 00 00 04 01 00 91 00 92 00 00 04 01 00 93 00 1c 00 00 04 01 00 94 00 | ................................ |
1180 | 95 00 00 04 01 00 96 00 2f 00 00 04 01 00 97 00 95 00 00 04 01 00 98 00 99 00 00 04 01 00 9a 00 | ......../....................... |
11a0 | 99 00 00 04 01 00 9b 00 5e 00 00 04 01 00 9b 00 9c 00 00 04 01 00 9b 00 9d 00 00 04 01 00 9b 00 | ........^....................... |
11c0 | 9e 00 00 00 00 | ..... |