Added modular install support

1 files changed, 71 insertions, 0 deletions

diff --git a/bin/dataset-install b/bin/dataset-install
new file mode 100755
index 0000000..daa0758
--- /dev/null
+++ b/bin/dataset-install
@@ -0,0 +1,71 @@
+#!/bin/sh
+
+# Installs Opentox Webservice.
+# Author: Christoph Helma, Andreas Maunz.
+
+SELF=$(basename $0 -install)
+[ "`id -u`" = "0" ] && echo "This script must be run as non-root." 1>&2 && exit 1
+
+# Adjust ruby version here!
+RUBY_NUM_VER="1.9.3-p194"
+
+echo
+echo "Welcome to service installation (<Return> to continue)."
+read delete_me
+
+
+# check wd is root of service
+DIR=`pwd`
+if echo $DIR | grep "$SELF/bin" >/dev/null 2>&1 ; then cd ..; fi
+
+# # # Boot the script
+
+# load base config, helper funs, environment
+OT_CONFIG_DIR="$HOME/.opentox"
+! [ -f "$OT_CONFIG_DIR/config/install/config.sh" ] && echo "config.sh not found." 1>&2 && exit 1 || . $OT_CONFIG_DIR/config/install/config.sh
+! [ -f "$OT_PREFIX/install/utils.sh" ] && echo "utils.sh not found." 1>&2 && exit 1 || . $OT_PREFIX/install/utils.sh
+[ -f $OT_CONFIG_DIR/opentox-ui.sh ] && . $OT_CONFIG_DIR/opentox-ui.sh # should have been done by user already
+RUBY_DIR="$HOME/.rbenv/versions/$RUBY_NUM_VER"
+
+
+# # # Install
+
+LOG="$OT_PREFIX/tmp/`basename $0`.log"
+check_utils "rbenv find"
+echo
+echo "Installation ('$LOG'):"
+echo
+
+if [ "$OT_BRANCH" = "development" ]; then
+  cmd="test -d $OT_PREFIX/opentox-server" && run_cmd "$cmd" "Opentox-server"
+  cmd="test -d $OT_PREFIX/opentox-client" && run_cmd "$cmd" "Opentox-client"
+fi
+
+
+# log directory for this service
+[ -d $OT_CONFIG_DIR/config/$SELF ] || cmd="mkdir -p $OT_CONFIG_DIR/config/$SELF" && run_cmd "$cmd" "Config directory"
+
+# ruby
+[ "`$RBENV local 2>/dev/null`" = "$RUBY_NUM_VER" ] || install_ruby
+
+# self
+echo
+install_with_bundler
+
+# config
+echo '$aa = { :uri => nil }' > $OT_CONFIG_DIR/config/$SELF.rb
+
+echo
+echo "Installation finished."
+echo
+echo "IMPORTANT: How to configure your system:"
+echo "IMPORTANT: a) Include '$OT_UI_CONF' in shell startup (e.g. ~/.bashrc)."
+echo "IMPORTANT: b) Manually source '$OT_UI_CONF' every time."
+echo "IMPORTANT: The command in both cases: '. $OT_UI_CONF'"
+echo "IMPORTANT: NOW would be the best time to configure!"
+echo
+echo "Thank you for your attention."
+echo
+
+# return to wd
+cd "$DIR"