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-rw-r--r--java/joelib2/molecule/AbstractAtom.classbin0 -> 616 bytes
-rw-r--r--java/joelib2/molecule/AbstractBond.classbin0 -> 212 bytes
-rw-r--r--java/joelib2/molecule/AbstractConformerAtom.classbin0 -> 243 bytes
-rw-r--r--java/joelib2/molecule/AbstractConformerMolecule.classbin0 -> 216 bytes
-rw-r--r--java/joelib2/molecule/AbstractMolecule.classbin0 -> 923 bytes
-rw-r--r--java/joelib2/molecule/Atom.classbin0 -> 2257 bytes
-rw-r--r--java/joelib2/molecule/AtomHelper.classbin0 -> 11153 bytes
-rw-r--r--java/joelib2/molecule/AtomTree.classbin0 -> 901 bytes
-rw-r--r--java/joelib2/molecule/AtomZPosComparator.classbin0 -> 728 bytes
-rw-r--r--java/joelib2/molecule/BasicBond.classbin0 -> 5418 bytes
-rw-r--r--java/joelib2/molecule/BasicConformerAtom.classbin0 -> 10261 bytes
-rw-r--r--java/joelib2/molecule/BasicConformerMolecule.classbin0 -> 28669 bytes
-rw-r--r--java/joelib2/molecule/BasicDataHolder.classbin0 -> 3958 bytes
-rw-r--r--java/joelib2/molecule/BasicElement.classbin0 -> 2702 bytes
-rw-r--r--java/joelib2/molecule/BasicMoleculeVector.classbin0 -> 3656 bytes
-rw-r--r--java/joelib2/molecule/Bond.classbin0 -> 1099 bytes
-rw-r--r--java/joelib2/molecule/BondComparator.classbin0 -> 657 bytes
-rw-r--r--java/joelib2/molecule/BondHelper.classbin0 -> 3502 bytes
-rw-r--r--java/joelib2/molecule/ChiralityHelper.classbin0 -> 2910 bytes
-rw-r--r--java/joelib2/molecule/ConformerAtom.classbin0 -> 264 bytes
-rw-r--r--java/joelib2/molecule/ConformerMolecule.classbin0 -> 1039 bytes
-rw-r--r--java/joelib2/molecule/ConnectionHelper.classbin0 -> 3030 bytes
-rw-r--r--java/joelib2/molecule/DataHolder.classbin0 -> 475 bytes
-rw-r--r--java/joelib2/molecule/Edge.classbin0 -> 527 bytes
-rw-r--r--java/joelib2/molecule/Graph.classbin0 -> 74 bytes
-rw-r--r--java/joelib2/molecule/IsomerismHelper.classbin0 -> 3910 bytes
-rw-r--r--java/joelib2/molecule/KekuleHelper.classbin0 -> 11580 bytes
-rw-r--r--java/joelib2/molecule/Molecule.classbin0 -> 4549 bytes
-rw-r--r--java/joelib2/molecule/MoleculeHelper.classbin0 -> 6832 bytes
-rw-r--r--java/joelib2/molecule/MoleculeVector.classbin0 -> 664 bytes
-rw-r--r--java/joelib2/molecule/Node.classbin0 -> 618 bytes
-rw-r--r--java/joelib2/molecule/ProtonationHelper.classbin0 -> 8436 bytes
-rw-r--r--java/joelib2/molecule/charge/GasteigerMarsili.classbin0 -> 5795 bytes
-rw-r--r--java/joelib2/molecule/charge/GasteigerMarsiliState.classbin0 -> 1091 bytes
-rw-r--r--java/joelib2/molecule/fragmentation/ContiguousFragments.classbin0 -> 4601 bytes
-rw-r--r--java/joelib2/molecule/fragmentation/Fragmentation.classbin0 -> 352 bytes
-rw-r--r--java/joelib2/molecule/fragmentation/SMARTSFragmentation.classbin0 -> 2934 bytes
-rw-r--r--java/joelib2/molecule/generation/MolGenerationHelper.classbin0 -> 3679 bytes
-rw-r--r--java/joelib2/molecule/types/AtomAtomProperties.classbin0 -> 456 bytes
-rw-r--r--java/joelib2/molecule/types/AtomProperties.classbin0 -> 485 bytes
-rw-r--r--java/joelib2/molecule/types/AtomPropertyColoring.classbin0 -> 345 bytes
-rw-r--r--java/joelib2/molecule/types/AtomPropertyHelper.classbin0 -> 3479 bytes
-rw-r--r--java/joelib2/molecule/types/BasicAtomPropertyColoring.classbin0 -> 2921 bytes
-rw-r--r--java/joelib2/molecule/types/BasicExternalBond.classbin0 -> 1032 bytes
-rw-r--r--java/joelib2/molecule/types/BasicExternalBondData.classbin0 -> 965 bytes
-rw-r--r--java/joelib2/molecule/types/BasicPairData.classbin0 -> 2062 bytes
-rw-r--r--java/joelib2/molecule/types/BasicPairDataCML.classbin0 -> 1855 bytes
-rw-r--r--java/joelib2/molecule/types/BasicPose.classbin0 -> 936 bytes
-rw-r--r--java/joelib2/molecule/types/BasicRGroupData.classbin0 -> 1100 bytes
-rw-r--r--java/joelib2/molecule/types/BasicResidue.classbin0 -> 4107 bytes
-rw-r--r--java/joelib2/molecule/types/BasicVirtualBond.classbin0 -> 798 bytes
-rw-r--r--java/joelib2/molecule/types/BondProperties.classbin0 -> 423 bytes
-rw-r--r--java/joelib2/molecule/types/BondPropertyHelper.classbin0 -> 2992 bytes
-rw-r--r--java/joelib2/molecule/types/ExternalBond.classbin0 -> 324 bytes
-rw-r--r--java/joelib2/molecule/types/ExternalBondData.classbin0 -> 162 bytes
-rw-r--r--java/joelib2/molecule/types/PairData.classbin0 -> 485 bytes
-rw-r--r--java/joelib2/molecule/types/PairDataCML.classbin0 -> 650 bytes
-rw-r--r--java/joelib2/molecule/types/Pose.classbin0 -> 412 bytes
-rw-r--r--java/joelib2/molecule/types/RGroupData.classbin0 -> 361 bytes
-rw-r--r--java/joelib2/molecule/types/Residue.classbin0 -> 979 bytes
-rw-r--r--java/joelib2/molecule/types/VirtualBond.classbin0 -> 265 bytes
61 files changed, 0 insertions, 0 deletions
diff --git a/java/joelib2/molecule/AbstractAtom.class b/java/joelib2/molecule/AbstractAtom.class
new file mode 100644
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+++ b/java/joelib2/molecule/AbstractAtom.class
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diff --git a/java/joelib2/molecule/AbstractBond.class b/java/joelib2/molecule/AbstractBond.class
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index 0000000..47dfa5d
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+++ b/java/joelib2/molecule/AbstractBond.class
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diff --git a/java/joelib2/molecule/AbstractConformerAtom.class b/java/joelib2/molecule/AbstractConformerAtom.class
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+++ b/java/joelib2/molecule/AbstractConformerAtom.class
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diff --git a/java/joelib2/molecule/AbstractConformerMolecule.class b/java/joelib2/molecule/AbstractConformerMolecule.class
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+++ b/java/joelib2/molecule/AbstractConformerMolecule.class
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diff --git a/java/joelib2/molecule/AbstractMolecule.class b/java/joelib2/molecule/AbstractMolecule.class
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index 0000000..de3ae96
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+++ b/java/joelib2/molecule/AbstractMolecule.class
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diff --git a/java/joelib2/molecule/Atom.class b/java/joelib2/molecule/Atom.class
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index 0000000..363fc91
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+++ b/java/joelib2/molecule/Atom.class
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diff --git a/java/joelib2/molecule/AtomHelper.class b/java/joelib2/molecule/AtomHelper.class
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index 0000000..cd9b9e9
--- /dev/null
+++ b/java/joelib2/molecule/AtomHelper.class
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diff --git a/java/joelib2/molecule/AtomTree.class b/java/joelib2/molecule/AtomTree.class
new file mode 100644
index 0000000..8a928ad
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+++ b/java/joelib2/molecule/AtomTree.class
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diff --git a/java/joelib2/molecule/AtomZPosComparator.class b/java/joelib2/molecule/AtomZPosComparator.class
new file mode 100644
index 0000000..6643233
--- /dev/null
+++ b/java/joelib2/molecule/AtomZPosComparator.class
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diff --git a/java/joelib2/molecule/BasicBond.class b/java/joelib2/molecule/BasicBond.class
new file mode 100644
index 0000000..1a5bcae
--- /dev/null
+++ b/java/joelib2/molecule/BasicBond.class
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diff --git a/java/joelib2/molecule/BasicConformerAtom.class b/java/joelib2/molecule/BasicConformerAtom.class
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index 0000000..b10fe6e
--- /dev/null
+++ b/java/joelib2/molecule/BasicConformerAtom.class
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diff --git a/java/joelib2/molecule/BasicConformerMolecule.class b/java/joelib2/molecule/BasicConformerMolecule.class
new file mode 100644
index 0000000..3c882dc
--- /dev/null
+++ b/java/joelib2/molecule/BasicConformerMolecule.class
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diff --git a/java/joelib2/molecule/BasicDataHolder.class b/java/joelib2/molecule/BasicDataHolder.class
new file mode 100644
index 0000000..1b2fb0c
--- /dev/null
+++ b/java/joelib2/molecule/BasicDataHolder.class
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diff --git a/java/joelib2/molecule/BasicElement.class b/java/joelib2/molecule/BasicElement.class
new file mode 100644
index 0000000..413e6da
--- /dev/null
+++ b/java/joelib2/molecule/BasicElement.class
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diff --git a/java/joelib2/molecule/BasicMoleculeVector.class b/java/joelib2/molecule/BasicMoleculeVector.class
new file mode 100644
index 0000000..24c0f9d
--- /dev/null
+++ b/java/joelib2/molecule/BasicMoleculeVector.class
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diff --git a/java/joelib2/molecule/Bond.class b/java/joelib2/molecule/Bond.class
new file mode 100644
index 0000000..17cee2c
--- /dev/null
+++ b/java/joelib2/molecule/Bond.class
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diff --git a/java/joelib2/molecule/BondComparator.class b/java/joelib2/molecule/BondComparator.class
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index 0000000..e6980d1
--- /dev/null
+++ b/java/joelib2/molecule/BondComparator.class
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diff --git a/java/joelib2/molecule/BondHelper.class b/java/joelib2/molecule/BondHelper.class
new file mode 100644
index 0000000..03e8713
--- /dev/null
+++ b/java/joelib2/molecule/BondHelper.class
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diff --git a/java/joelib2/molecule/ChiralityHelper.class b/java/joelib2/molecule/ChiralityHelper.class
new file mode 100644
index 0000000..b1265d7
--- /dev/null
+++ b/java/joelib2/molecule/ChiralityHelper.class
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diff --git a/java/joelib2/molecule/ConformerAtom.class b/java/joelib2/molecule/ConformerAtom.class
new file mode 100644
index 0000000..fd802ad
--- /dev/null
+++ b/java/joelib2/molecule/ConformerAtom.class
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diff --git a/java/joelib2/molecule/ConformerMolecule.class b/java/joelib2/molecule/ConformerMolecule.class
new file mode 100644
index 0000000..b22d222
--- /dev/null
+++ b/java/joelib2/molecule/ConformerMolecule.class
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diff --git a/java/joelib2/molecule/ConnectionHelper.class b/java/joelib2/molecule/ConnectionHelper.class
new file mode 100644
index 0000000..0be4b45
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+++ b/java/joelib2/molecule/ConnectionHelper.class
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diff --git a/java/joelib2/molecule/DataHolder.class b/java/joelib2/molecule/DataHolder.class
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index 0000000..be3cbf5
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+++ b/java/joelib2/molecule/DataHolder.class
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diff --git a/java/joelib2/molecule/Edge.class b/java/joelib2/molecule/Edge.class
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index 0000000..1c21b0a
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+++ b/java/joelib2/molecule/Edge.class
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diff --git a/java/joelib2/molecule/Graph.class b/java/joelib2/molecule/Graph.class
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index 0000000..72d9be9
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+++ b/java/joelib2/molecule/Graph.class
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diff --git a/java/joelib2/molecule/IsomerismHelper.class b/java/joelib2/molecule/IsomerismHelper.class
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index 0000000..6a32725
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+++ b/java/joelib2/molecule/IsomerismHelper.class
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diff --git a/java/joelib2/molecule/KekuleHelper.class b/java/joelib2/molecule/KekuleHelper.class
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index 0000000..89d0691
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diff --git a/java/joelib2/molecule/Molecule.class b/java/joelib2/molecule/Molecule.class
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diff --git a/java/joelib2/molecule/MoleculeHelper.class b/java/joelib2/molecule/MoleculeHelper.class
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diff --git a/java/joelib2/molecule/MoleculeVector.class b/java/joelib2/molecule/MoleculeVector.class
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diff --git a/java/joelib2/molecule/Node.class b/java/joelib2/molecule/Node.class
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diff --git a/java/joelib2/molecule/ProtonationHelper.class b/java/joelib2/molecule/ProtonationHelper.class
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diff --git a/java/joelib2/molecule/charge/GasteigerMarsili.class b/java/joelib2/molecule/charge/GasteigerMarsili.class
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diff --git a/java/joelib2/molecule/charge/GasteigerMarsiliState.class b/java/joelib2/molecule/charge/GasteigerMarsiliState.class
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diff --git a/java/joelib2/molecule/fragmentation/ContiguousFragments.class b/java/joelib2/molecule/fragmentation/ContiguousFragments.class
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diff --git a/java/joelib2/molecule/fragmentation/Fragmentation.class b/java/joelib2/molecule/fragmentation/Fragmentation.class
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diff --git a/java/joelib2/molecule/fragmentation/SMARTSFragmentation.class b/java/joelib2/molecule/fragmentation/SMARTSFragmentation.class
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+++ b/java/joelib2/molecule/fragmentation/SMARTSFragmentation.class
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diff --git a/java/joelib2/molecule/generation/MolGenerationHelper.class b/java/joelib2/molecule/generation/MolGenerationHelper.class
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diff --git a/java/joelib2/molecule/types/AtomAtomProperties.class b/java/joelib2/molecule/types/AtomAtomProperties.class
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diff --git a/java/joelib2/molecule/types/AtomProperties.class b/java/joelib2/molecule/types/AtomProperties.class
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diff --git a/java/joelib2/molecule/types/AtomPropertyColoring.class b/java/joelib2/molecule/types/AtomPropertyColoring.class
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diff --git a/java/joelib2/molecule/types/AtomPropertyHelper.class b/java/joelib2/molecule/types/AtomPropertyHelper.class
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diff --git a/java/joelib2/molecule/types/BasicAtomPropertyColoring.class b/java/joelib2/molecule/types/BasicAtomPropertyColoring.class
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diff --git a/java/joelib2/molecule/types/BasicExternalBond.class b/java/joelib2/molecule/types/BasicExternalBond.class
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diff --git a/java/joelib2/molecule/types/BasicExternalBondData.class b/java/joelib2/molecule/types/BasicExternalBondData.class
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diff --git a/java/joelib2/molecule/types/BasicPairData.class b/java/joelib2/molecule/types/BasicPairData.class
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diff --git a/java/joelib2/molecule/types/BasicPairDataCML.class b/java/joelib2/molecule/types/BasicPairDataCML.class
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diff --git a/java/joelib2/molecule/types/BasicPose.class b/java/joelib2/molecule/types/BasicPose.class
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diff --git a/java/joelib2/molecule/types/BasicRGroupData.class b/java/joelib2/molecule/types/BasicRGroupData.class
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diff --git a/java/joelib2/molecule/types/BasicResidue.class b/java/joelib2/molecule/types/BasicResidue.class
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diff --git a/java/joelib2/molecule/types/BasicVirtualBond.class b/java/joelib2/molecule/types/BasicVirtualBond.class
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diff --git a/java/joelib2/molecule/types/BondProperties.class b/java/joelib2/molecule/types/BondProperties.class
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diff --git a/java/joelib2/molecule/types/BondPropertyHelper.class b/java/joelib2/molecule/types/BondPropertyHelper.class
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diff --git a/java/joelib2/molecule/types/ExternalBond.class b/java/joelib2/molecule/types/ExternalBond.class
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diff --git a/java/joelib2/molecule/types/PairData.class b/java/joelib2/molecule/types/PairData.class
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diff --git a/java/joelib2/molecule/types/Pose.class b/java/joelib2/molecule/types/Pose.class
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diff --git a/java/joelib2/molecule/types/RGroupData.class b/java/joelib2/molecule/types/RGroupData.class
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diff --git a/java/joelib2/molecule/types/Residue.class b/java/joelib2/molecule/types/Residue.class
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diff --git a/java/joelib2/molecule/types/VirtualBond.class b/java/joelib2/molecule/types/VirtualBond.class
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