blob: 2a45b3d8edcc45c4797c3a9c1768e8c69af767bf (plain)

ofs	hex dump	ascii
0000	ca fe ba be 00 00 00 31 01 33 0a 00 6a 00 7f 07 00 80 0a 00 02 00 7f 0a 00 02 00 81 0a 00 82 00	.......1.3..j...................
0020	83 0a 00 02 00 84 0a 00 02 00 85 08 00 86 0a 00 87 00 88 0a 00 87 00 89 0a 00 8a 00 8b 0a 00 87	................................
0040	00 8c 0a 00 8a 00 8d 09 00 02 00 8e 09 00 02 00 8f 07 00 90 0a 00 10 00 7f 08 00 91 0a 00 10 00	................................
0060	92 08 00 93 0a 00 10 00 94 0a 00 95 00 96 09 00 02 00 97 08 00 98 09 00 02 00 99 08 00 9a 08 00	................................
0080	9b 0a 00 87 00 9c 09 00 02 00 9d 0a 00 9e 00 9f 08 00 a0 0a 00 9e 00 a1 07 00 a2 07 00 a3 0a 00	................................
00a0	22 00 a4 08 00 a5 0a 00 21 00 a6 0a 00 a7 00 a8 08 00 a9 0a 00 a7 00 aa 07 00 ab 08 00 ac 07 00	".......!.......................
00c0	ad 09 00 02 00 ae 07 00 af 0a 00 2d 00 a4 0a 00 b0 00 b1 08 00 b2 0a 00 95 00 b3 08 00 b4 0b 00	...........-....................
00e0	b5 00 b6 0a 00 10 00 b7 08 00 b8 0a 00 10 00 b9 0a 00 95 00 ba 0a 00 29 00 bb 0a 00 29 00 bc 07	.......................)....)...
0100	00 bd 0a 00 3a 00 a4 0a 00 2b 00 be 07 00 bf 0a 00 3d 00 c0 07 00 c1 0a 00 3f 00 c2 07 00 c3 0a	....:....+.......=.......?......
0120	00 41 00 a4 07 00 c4 0a 00 43 00 c5 07 00 c6 0a 00 45 00 7f 0a 00 3f 00 c7 0a 00 2b 00 c8 0b 00	.A.......C.......E....?....+....
0140	c9 00 ca 08 00 cb 0a 00 95 00 cc 08 00 cd 08 00 ce 0a 00 45 00 cf 08 00 d0 0a 00 95 00 d1 07 00	...................E............
0160	d2 0a 00 51 00 7f 0a 00 6a 00 d3 0a 00 d4 00 d5 08 00 d6 0a 00 51 00 d7 08 00 d8 08 00 d9 08 00	...Q....j............Q..........
0180	da 08 00 db 08 00 dc 08 00 dd 08 00 de 08 00 df 08 00 e0 08 00 e1 08 00 e2 08 00 e3 08 00 e4 0a	................................
01a0	00 8a 00 94 08 00 e5 09 00 82 00 e6 0a 00 51 00 94 0a 00 e7 00 e8 0a 00 95 00 e9 07 00 ea 01 00	..............Q.................
01c0	06 6c 6f 67 67 65 72 01 00 1b 4c 6f 72 67 2f 61 70 61 63 68 65 2f 6c 6f 67 34 6a 2f 43 61 74 65	.logger...Lorg/apache/log4j/Cate
01e0	67 6f 72 79 3b 01 00 09 64 65 6c 69 6d 69 74 65 72 01 00 12 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53	gory;...delimiter...Ljava/lang/S
0200	74 72 69 6e 67 3b 01 00 09 69 6e 70 75 74 46 69 6c 65 01 00 06 69 6e 54 79 70 65 01 00 18 4c 6a	tring;...inputFile...inType...Lj
0220	6f 65 6c 69 62 32 2f 69 6f 2f 42 61 73 69 63 49 4f 54 79 70 65 3b 01 00 07 6f 75 74 54 79 70 65	oelib2/io/BasicIOType;...outType
0240	01 00 0b 70 72 6f 63 65 73 73 50 69 70 65 01 00 1d 4c 6a 6f 65 6c 69 62 32 2f 70 72 6f 63 65 73	...processPipe...Ljoelib2/proces
0260	73 2f 50 72 6f 63 65 73 73 50 69 70 65 3b 01 00 06 3c 69 6e 69 74 3e 01 00 03 28 29 56 01 00 04	s/ProcessPipe;...<init>...()V...
0280	43 6f 64 65 01 00 04 6d 61 69 6e 01 00 16 28 5b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e	Code...main...([Ljava/lang/Strin
02a0	67 3b 29 56 01 00 10 70 61 72 73 65 43 6f 6d 6d 61 6e 64 4c 69 6e 65 01 00 16 28 5b 4c 6a 61 76	g;)V...parseCommandLine...([Ljav
02c0	61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 5a 01 00 04 74 65 73 74 01 00 05 75 73 61 67 65 01	a/lang/String;)Z...test...usage.
02e0	00 08 3c 63 6c 69 6e 69 74 3e 0c 00 75 00 76 01 00 2a 6a 6f 65 6c 69 62 32 2f 65 78 61 6d 70 6c	..<clinit>..u.v..*joelib2/exampl
0300	65 2f 44 65 73 63 72 69 70 74 6f 72 53 65 6c 65 63 74 69 6f 6e 45 78 61 6d 70 6c 65 0c 00 7d 00	e/DescriptorSelectionExample..}.
0320	76 07 00 eb 0c 00 ec 00 ed 0c 00 7a 00 7b 0c 00 7c 00 76 01 00 02 2d 69 07 00 ee 0c 00 ef 00 f0	v..........z.{..|.v...-i........
0340	0c 00 f1 00 f2 07 00 f3 0c 00 f4 00 f5 0c 00 f6 00 f7 0c 00 f8 00 f9 0c 00 70 00 71 0c 00 6b 00	.........................p.q..k.
0360	6c 01 00 17 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 42 75 69 6c 64 65 72 01 00 0c 49 6e	l...java/lang/StringBuilder...In
0380	70 75 74 20 74 79 70 65 20 27 0c 00 fa 00 fb 01 00 0e 27 20 6e 6f 74 20 64 65 66 69 6e 65 64 2e	put.type.'........'.not.defined.
03a0	0c 00 fc 00 f7 07 00 fd 0c 00 fe 00 ff 0c 00 6f 00 6e 01 00 02 2d 6f 0c 00 72 00 71 01 00 0d 4f	...............o.n...-o..r.q...O
03c0	75 74 70 75 74 20 74 79 70 65 20 27 01 00 04 66 6c 61 74 0c 01 00 01 01 0c 00 6d 00 6e 07 01 02	utput.type.'...flat.......m.n...
03e0	0c 00 f4 01 03 01 00 10 44 65 73 63 72 69 70 74 6f 72 46 69 6c 74 65 72 0c 01 04 01 05 01 00 27	........DescriptorFilter.......'
0400	6a 6f 65 6c 69 62 32 2f 70 72 6f 63 65 73 73 2f 66 69 6c 74 65 72 2f 44 65 73 63 72 69 70 74 6f	joelib2/process/filter/Descripto
0420	72 46 69 6c 74 65 72 01 00 26 6a 6f 65 6c 69 62 32 2f 70 72 6f 63 65 73 73 2f 66 69 6c 74 65 72	rFilter..&joelib2/process/filter
0440	2f 46 69 6c 74 65 72 45 78 63 65 70 74 69 6f 6e 0c 01 06 00 76 01 00 2c 46 69 6c 74 65 72 3a 20	/FilterException....v..,Filter:.
0460	44 65 73 63 72 69 70 74 6f 72 46 69 6c 74 65 72 20 63 6f 75 6c 64 20 6e 6f 74 20 62 65 20 66 6f	DescriptorFilter.could.not.be.fo
0480	75 6e 64 2e 0c 01 07 01 08 07 01 09 0c 00 f4 01 0a 01 00 16 46 65 61 74 75 72 65 53 65 6c 65 63	und.................FeatureSelec
04a0	74 69 6f 6e 57 72 69 74 65 72 0c 01 0b 01 0c 01 00 2c 6a 6f 65 6c 69 62 32 2f 70 72 6f 63 65 73	tionWriter.......,joelib2/proces
04c0	73 2f 74 79 70 65 73 2f 46 65 61 74 75 72 65 53 65 6c 65 63 74 69 6f 6e 57 72 69 74 65 72 01 00	s/types/FeatureSelectionWriter..
04e0	0b 50 72 6f 63 65 73 73 50 69 70 65 01 00 1b 6a 6f 65 6c 69 62 32 2f 70 72 6f 63 65 73 73 2f 50	.ProcessPipe...joelib2/process/P
0500	72 6f 63 65 73 73 50 69 70 65 0c 00 73 00 74 01 00 28 6a 6f 65 6c 69 62 32 2f 70 72 6f 63 65 73	rocessPipe..s.t..(joelib2/proces
0520	73 2f 4d 6f 6c 65 63 75 6c 65 50 72 6f 63 65 73 73 45 78 63 65 70 74 69 6f 6e 07 01 0d 0c 01 0e	s/MoleculeProcessException......
0540	01 0f 01 00 0b 43 61 6e 27 74 20 6c 6f 61 64 20 0c 01 10 01 11 01 00 07 73 65 6c 65 63 74 20 07	.....Can't.load.........select..
0560	01 12 0c 01 13 01 14 0c 00 fa 01 15 01 00 0d 20 64 65 73 63 72 69 70 74 6f 72 73 3a 0c 00 fa 01	................descriptors:....
0580	16 0c 01 17 00 ff 0c 01 07 01 18 0c 01 19 01 1a 01 00 13 6a 61 76 61 2f 6c 61 6e 67 2f 45 78 63	...................java/lang/Exc
05a0	65 70 74 69 6f 6e 0c 01 1b 01 1c 01 00 17 6a 61 76 61 2f 69 6f 2f 46 69 6c 65 49 6e 70 75 74 53	eption........java/io/FileInputS
05c0	74 72 65 61 6d 0c 00 75 01 1a 01 00 16 6a 6f 65 6c 69 62 32 2f 69 6f 2f 42 61 73 69 63 52 65 61	tream..u.....joelib2/io/BasicRea
05e0	64 65 72 0c 00 75 01 1d 01 00 13 6a 61 76 61 2f 69 6f 2f 49 4f 45 78 63 65 70 74 69 6f 6e 01 00	der..u.....java/io/IOException..
0600	27 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 42 61 73 69 63 43 6f 6e 66 6f 72 6d 65 72	'joelib2/molecule/BasicConformer
0620	4d 6f 6c 65 63 75 6c 65 0c 00 75 01 1e 01 00 15 77 73 69 2f 72 61 2f 74 6f 6f 6c 2f 53 74 6f 70	Molecule..u.....wsi/ra/tool/Stop
0640	57 61 74 63 68 0c 01 1f 01 20 0c 01 21 01 22 07 01 23 0c 01 24 00 f7 01 00 44 20 77 61 73 20 6e	Watch.......!."..#..$....D.was.n
0660	6f 74 20 73 65 6c 65 63 74 65 64 2e 20 46 69 6c 74 65 72 20 72 75 6c 65 20 61 76 6f 69 64 73 20	ot.selected..Filter.rule.avoids.
0680	74 68 65 20 61 64 64 69 74 69 6f 6e 20 74 6f 20 74 68 65 20 73 6b 69 70 20 66 69 6c 65 2e 0c 01	the.addition.to.the.skip.file...
06a0	25 00 ff 01 00 04 2e 2e 2e 20 01 00 22 20 6d 6f 6c 65 63 75 6c 65 73 20 73 75 63 63 65 73 73 66	%...........".molecules.successf
06c0	75 6c 20 73 65 6c 65 63 74 65 64 20 69 6e 20 0c 01 26 01 14 01 00 04 20 6d 73 2e 0c 01 27 00 ff	ul.selected.in...&......ms...'..
06e0	01 00 16 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 42 75 66 66 65 72 0c 01 28 01 29 07 01	...java/lang/StringBuffer..(.)..
0700	2a 0c 01 2b 00 f7 01 00 0b 55 73 61 67 65 20 69 73 20 3a 0a 0c 00 fa 01 2c 01 00 0b 6a 61 76 61	*..+.....Usage.is.:.....,...java
0720	20 2d 63 70 20 2e 20 01 00 10 20 2d 69 3c 69 6e 70 75 74 46 6f 72 6d 61 74 3e 01 00 0d 20 3c 69	.-cp.......-i<inputFormat>....<i
0740	6e 70 75 74 20 66 69 6c 65 3e 01 00 11 20 2d 6f 3c 6f 75 74 70 75 74 46 6f 72 6d 61 74 3e 01 00	nput.file>....-o<outputFormat>..
0760	0e 20 3c 6f 75 74 70 75 74 20 66 69 6c 65 3e 01 00 0f 20 3c 64 65 73 63 4e 61 6d 65 46 69 6c 65	..<output.file>....<descNameFile
0780	3e 01 00 0e 20 5b 66 6c 61 74 2c 6e 6f 72 6d 61 6c 5d 01 00 0c 20 3c 64 65 6c 69 6d 69 74 65 72	>....[flat,normal]....<delimiter
07a0	3e 01 00 35 0a 0a 20 77 68 65 72 65 20 5b 66 6c 61 74 2c 64 65 65 70 5d 20 69 73 20 74 68 65 20	>..5...where.[flat,deep].is.the.
07c0	6f 75 74 70 75 74 20 66 6f 72 6d 61 74 2e 20 64 65 65 70 20 6d 65 61 6e 73 01 00 38 0a 20 61 20	output.format..deep.means..8..a.
07e0	6e 6f 72 6d 61 6c 20 53 44 20 66 69 6c 65 20 66 6f 72 6d 61 74 20 77 69 74 68 20 61 6c 6c 20 64	normal.SD.file.format.with.all.d
0800	65 73 63 72 69 70 74 6f 72 73 20 6c 69 73 74 65 64 20 69 6e 01 00 33 0a 20 64 65 73 63 4e 61 6d	escriptors.listed.in..3..descNam
0820	65 46 69 6c 65 2e 20 66 6c 61 74 20 69 73 20 61 20 70 6c 61 69 6e 20 64 61 74 61 20 66 69 6c 65	eFile..flat.is.a.plain.data.file
0840	20 77 69 74 68 20 61 6c 6c 20 01 00 25 0a 20 64 65 73 63 72 69 70 74 6f 72 73 20 6c 69 73 74 65	.with.all...%..descriptors.liste
0860	64 20 69 6e 20 64 65 73 63 4e 61 6d 65 46 69 6c 65 2e 01 00 1b 0a 0a 53 75 70 70 6f 72 74 65 64	d.in.descNameFile......Supported
0880	20 6d 6f 6c 65 63 75 6c 65 20 74 79 70 65 73 3a 01 00 43 0a 0a 54 68 69 73 20 69 73 20 76 65 72	.molecule.types:..C..This.is.ver
08a0	73 69 6f 6e 20 24 52 65 76 69 73 69 6f 6e 3a 20 31 2e 31 30 20 24 20 28 24 44 61 74 65 3a 20 32	sion.$Revision:.1.10.$.($Date:.2
08c0	30 30 35 2f 30 32 2f 31 37 20 31 36 3a 34 38 3a 32 39 20 24 29 0a 0c 01 2d 01 2e 07 01 2f 0c 01	005/02/17.16:48:29.$)...-..../..
08e0	30 01 1a 0c 01 31 01 32 01 00 10 6a 61 76 61 2f 6c 61 6e 67 2f 4f 62 6a 65 63 74 01 00 10 6a 61	0....1.2...java/lang/Object...ja
0900	76 61 2f 6c 61 6e 67 2f 53 79 73 74 65 6d 01 00 04 65 78 69 74 01 00 04 28 49 29 56 01 00 10 6a	va/lang/System...exit...(I)V...j
0920	61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 01 00 07 69 6e 64 65 78 4f 66 01 00 15 28 4c 6a 61	ava/lang/String...indexOf...(Lja
0940	76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 49 01 00 09 73 75 62 73 74 72 69 6e 67 01 00 15	va/lang/String;)I...substring...
0960	28 49 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 01 00 1c 6a 6f 65 6c 69 62 32 2f	(I)Ljava/lang/String;...joelib2/
0980	69 6f 2f 42 61 73 69 63 49 4f 54 79 70 65 48 6f 6c 64 65 72 01 00 08 69 6e 73 74 61 6e 63 65 01	io/BasicIOTypeHolder...instance.
09a0	00 20 28 29 4c 6a 6f 65 6c 69 62 32 2f 69 6f 2f 42 61 73 69 63 49 4f 54 79 70 65 48 6f 6c 64 65	..()Ljoelib2/io/BasicIOTypeHolde
09c0	72 3b 01 00 0b 74 6f 55 70 70 65 72 43 61 73 65 01 00 14 28 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f	r;...toUpperCase...()Ljava/lang/
09e0	53 74 72 69 6e 67 3b 01 00 09 67 65 74 49 4f 54 79 70 65 01 00 2c 28 4c 6a 61 76 61 2f 6c 61 6e	String;...getIOType..,(Ljava/lan
0a00	67 2f 53 74 72 69 6e 67 3b 29 4c 6a 6f 65 6c 69 62 32 2f 69 6f 2f 42 61 73 69 63 49 4f 54 79 70	g/String;)Ljoelib2/io/BasicIOTyp
0a20	65 3b 01 00 06 61 70 70 65 6e 64 01 00 2d 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67	e;...append..-(Ljava/lang/String
0a40	3b 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 42 75 69 6c 64 65 72 3b 01 00 08 74 6f	;)Ljava/lang/StringBuilder;...to
0a60	53 74 72 69 6e 67 01 00 19 6f 72 67 2f 61 70 61 63 68 65 2f 6c 6f 67 34 6a 2f 43 61 74 65 67 6f	String...org/apache/log4j/Catego
0a80	72 79 01 00 05 65 72 72 6f 72 01 00 15 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 4f 62 6a 65 63 74 3b	ry...error...(Ljava/lang/Object;
0aa0	29 56 01 00 10 65 71 75 61 6c 73 49 67 6e 6f 72 65 43 61 73 65 01 00 15 28 4c 6a 61 76 61 2f 6c	)V...equalsIgnoreCase...(Ljava/l
0ac0	61 6e 67 2f 53 74 72 69 6e 67 3b 29 5a 01 00 24 6a 6f 65 6c 69 62 32 2f 70 72 6f 63 65 73 73 2f	ang/String;)Z..$joelib2/process/
0ae0	66 69 6c 74 65 72 2f 46 69 6c 74 65 72 46 61 63 74 6f 72 79 01 00 28 28 29 4c 6a 6f 65 6c 69 62	filter/FilterFactory..(()Ljoelib
0b00	32 2f 70 72 6f 63 65 73 73 2f 66 69 6c 74 65 72 2f 46 69 6c 74 65 72 46 61 63 74 6f 72 79 3b 01	2/process/filter/FilterFactory;.
0b20	00 09 67 65 74 46 69 6c 74 65 72 01 00 33 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67	..getFilter..3(Ljava/lang/String
0b40	3b 29 4c 6a 6f 65 6c 69 62 32 2f 70 72 6f 63 65 73 73 2f 66 69 6c 74 65 72 2f 46 69 6c 74 65 72	;)Ljoelib2/process/filter/Filter
0b60	3b 01 00 0f 70 72 69 6e 74 53 74 61 63 6b 54 72 61 63 65 01 00 04 69 6e 69 74 01 00 16 28 4c 6a	;...printStackTrace...init...(Lj
0b80	61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 5a 29 56 01 00 1e 6a 6f 65 6c 69 62 32 2f 70 72	ava/lang/String;Z)V...joelib2/pr
0ba0	6f 63 65 73 73 2f 50 72 6f 63 65 73 73 46 61 63 74 6f 72 79 01 00 22 28 29 4c 6a 6f 65 6c 69 62	ocess/ProcessFactory.."()Ljoelib
0bc0	32 2f 70 72 6f 63 65 73 73 2f 50 72 6f 63 65 73 73 46 61 63 74 6f 72 79 3b 01 00 0a 67 65 74 50	2/process/ProcessFactory;...getP
0be0	72 6f 63 65 73 73 01 00 35 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6a 6f	rocess..5(Ljava/lang/String;)Ljo
0c00	65 6c 69 62 32 2f 70 72 6f 63 65 73 73 2f 4d 6f 6c 65 63 75 6c 65 50 72 6f 63 65 73 73 3b 01 00	elib2/process/MoleculeProcess;..
0c20	1f 77 73 69 2f 72 61 2f 74 6f 6f 6c 2f 42 61 73 69 63 52 65 73 6f 75 72 63 65 4c 6f 61 64 65 72	.wsi/ra/tool/BasicResourceLoader
0c40	01 00 09 72 65 61 64 4c 69 6e 65 73 01 00 25 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e	...readLines..%(Ljava/lang/Strin
0c60	67 3b 5a 29 4c 6a 61 76 61 2f 75 74 69 6c 2f 4c 69 73 74 3b 01 00 0e 69 73 44 65 62 75 67 45 6e	g;Z)Ljava/util/List;...isDebugEn
0c80	61 62 6c 65 64 01 00 03 28 29 5a 01 00 0e 6a 61 76 61 2f 75 74 69 6c 2f 4c 69 73 74 01 00 04 73	abled...()Z...java/util/List...s
0ca0	69 7a 65 01 00 03 28 29 49 01 00 1c 28 49 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67	ize...()I...(I)Ljava/lang/String
0cc0	42 75 69 6c 64 65 72 3b 01 00 2d 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 4f 62 6a 65 63 74 3b 29 4c	Builder;..-(Ljava/lang/Object;)L
0ce0	6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 42 75 69 6c 64 65 72 3b 01 00 05 64 65 62 75 67	java/lang/StringBuilder;...debug
0d00	01 00 3e 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 4c 6a 6f 65 6c 69 62 32 2f 69	..>(Ljava/lang/String;Ljoelib2/i
0d20	6f 2f 42 61 73 69 63 49 4f 54 79 70 65 3b 4c 6a 61 76 61 2f 75 74 69 6c 2f 4c 69 73 74 3b 49 29	o/BasicIOType;Ljava/util/List;I)
0d40	56 01 00 0c 73 65 74 44 65 6c 69 6d 69 74 65 72 01 00 15 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53	V...setDelimiter...(Ljava/lang/S
0d60	74 72 69 6e 67 3b 29 56 01 00 0a 61 64 64 50 72 6f 63 65 73 73 01 00 43 28 4c 6a 6f 65 6c 69 62	tring;)V...addProcess..C(Ljoelib
0d80	32 2f 70 72 6f 63 65 73 73 2f 4d 6f 6c 65 63 75 6c 65 50 72 6f 63 65 73 73 3b 4c 6a 6f 65 6c 69	2/process/MoleculeProcess;Ljoeli
0da0	62 32 2f 70 72 6f 63 65 73 73 2f 66 69 6c 74 65 72 2f 46 69 6c 74 65 72 3b 29 56 01 00 2b 28 4c	b2/process/filter/Filter;)V..+(L
0dc0	6a 61 76 61 2f 69 6f 2f 49 6e 70 75 74 53 74 72 65 61 6d 3b 4c 6a 6f 65 6c 69 62 32 2f 69 6f 2f	java/io/InputStream;Ljoelib2/io/
0de0	49 4f 54 79 70 65 3b 29 56 01 00 29 28 4c 6a 6f 65 6c 69 62 32 2f 69 6f 2f 49 4f 54 79 70 65 3b	IOType;)V..)(Ljoelib2/io/IOType;
0e00	4c 6a 6f 65 6c 69 62 32 2f 69 6f 2f 49 4f 54 79 70 65 3b 29 56 01 00 08 72 65 61 64 4e 65 78 74	Ljoelib2/io/IOType;)V...readNext
0e20	01 00 1e 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 29	...(Ljoelib2/molecule/Molecule;)
0e40	5a 01 00 07 70 72 6f 63 65 73 73 01 00 2d 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65	Z...process..-(Ljoelib2/molecule
0e60	2f 4d 6f 6c 65 63 75 6c 65 3b 4c 6a 61 76 61 2f 75 74 69 6c 2f 4d 61 70 3b 29 5a 01 00 19 6a 6f	/Molecule;Ljava/util/Map;)Z...jo
0e80	65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 01 00 08 67 65 74 54 69 74	elib2/molecule/Molecule...getTit
0ea0	6c 65 01 00 04 77 61 72 6e 01 00 0d 67 65 74 50 61 73 73 65 64 54 69 6d 65 01 00 04 69 6e 66 6f	le...warn...getPassedTime...info
0ec0	01 00 08 67 65 74 43 6c 61 73 73 01 00 13 28 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 43 6c 61 73 73	...getClass...()Ljava/lang/Class
0ee0	3b 01 00 0f 6a 61 76 61 2f 6c 61 6e 67 2f 43 6c 61 73 73 01 00 07 67 65 74 4e 61 6d 65 01 00 2c	;...java/lang/Class...getName..,
0f00	28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53	(Ljava/lang/String;)Ljava/lang/S
0f20	74 72 69 6e 67 42 75 66 66 65 72 3b 01 00 03 6f 75 74 01 00 15 4c 6a 61 76 61 2f 69 6f 2f 50 72	tringBuffer;...out...Ljava/io/Pr
0f40	69 6e 74 53 74 72 65 61 6d 3b 01 00 13 6a 61 76 61 2f 69 6f 2f 50 72 69 6e 74 53 74 72 65 61 6d	intStream;...java/io/PrintStream
0f60	01 00 07 70 72 69 6e 74 6c 6e 01 00 0b 67 65 74 49 6e 73 74 61 6e 63 65 01 00 2f 28 4c 6a 61 76	...println...getInstance../(Ljav
0f80	61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6f 72 67 2f 61 70 61 63 68 65 2f 6c 6f 67 34 6a	a/lang/String;)Lorg/apache/log4j
0fa0	2f 43 61 74 65 67 6f 72 79 3b 00 21 00 02 00 6a 00 00 00 06 00 0a 00 6b 00 6c 00 00 00 02 00 6d	/Category;.!...j.......k.l.....m
0fc0	00 6e 00 00 00 02 00 6f 00 6e 00 00 00 02 00 70 00 71 00 00 00 02 00 72 00 71 00 00 00 02 00 73	.n.....o.n.....p.q.....r.q.....s
0fe0	00 74 00 00 00 06 00 01 00 75 00 76 00 01 00 77 00 00 00 11 00 01 00 01 00 00 00 05 2a b7 00 01	.t.......u.v...w............*...
1000	b1 00 00 00 00 00 09 00 78 00 79 00 01 00 77 00 00 00 3a 00 02 00 02 00 00 00 2e bb 00 02 59 b7	........x.y...w...:...........Y.
1020	00 03 4c 2a be 10 07 9f 00 0e 2b b6 00 04 03 b8 00 05 a7 00 16 2b 2a b6 00 06 99 00 0a 2b b6 00	..L*......+..........+*......+..
1040	07 a7 00 07 04 b8 00 05 b1 00 00 00 00 00 01 00 7a 00 7b 00 01 00 77 00 00 01 d6 00 05 00 0a 00	................z.{...w.........
1060	00 01 b2 2b 03 32 12 08 b6 00 09 9a 00 40 2b 03 32 05 b6 00 0a 4d 2a b8 00 0b 2c b6 00 0c b6 00	...+.2.......@+.2....M*...,.....
1080	0d b5 00 0e 2a b4 00 0e c7 00 23 b2 00 0f bb 00 10 59 b7 00 11 12 12 b6 00 13 2c b6 00 13 12 14	....*.....#......Y........,.....
10a0	b6 00 13 b6 00 15 b6 00 16 03 ac 2a 2b 04 32 b5 00 17 2b 05 32 12 18 b6 00 09 9a 00 40 2b 05 32	...........*+.2...+.2.......@+.2
10c0	05 b6 00 0a 4d 2a b8 00 0b 2c b6 00 0c b6 00 0d b5 00 19 2a b4 00 19 c7 00 23 b2 00 0f bb 00 10	....M*...,.........*.....#......
10e0	59 b7 00 11 12 1a b6 00 13 2c b6 00 13 12 14 b6 00 13 b6 00 15 b6 00 16 03 ac 2b 06 32 4d 2b 07	Y........,................+.2M+.
1100	32 4e 04 36 04 2b 08 32 3a 05 19 05 12 1b b6 00 1c 99 00 09 03 36 04 a7 00 06 04 36 04 2a 2b 10	2N.6.+.2:............6.....6.*+.
1120	06 32 b5 00 1d 01 3a 06 b8 00 1e 12 1f b6 00 20 c0 00 21 3a 06 a7 00 0e 3a 07 19 07 b6 00 23 04	.2....:...........!:....:.....#.
1140	b8 00 05 19 06 c7 00 0f b2 00 0f 12 24 b6 00 16 04 b8 00 05 19 06 2d 03 b6 00 25 01 3a 07 b8 00	............$.........-...%.:...
1160	26 12 27 b6 00 28 c0 00 29 3a 07 2a b8 00 26 12 2a b6 00 28 c0 00 2b b5 00 2c a7 00 0e 3a 08 19	&.'..(..):.*..&.*..(..+..,...:..
1180	08 b6 00 2e 04 b8 00 05 2d 03 b8 00 2f 3a 08 19 08 c7 00 20 b2 00 0f bb 00 10 59 b7 00 11 12 30	........-.../:............Y....0
11a0	b6 00 13 2d b6 00 13 b6 00 15 b6 00 16 04 b8 00 05 b2 00 0f b6 00 31 99 00 2c b2 00 0f bb 00 10	...-..................1..,......
11c0	59 b7 00 11 12 32 b6 00 13 19 08 b9 00 33 01 00 b6 00 34 12 35 b6 00 13 19 08 b6 00 36 b6 00 15	Y....2.......3....4.5.......6...
11e0	b6 00 37 19 07 2c 2a b4 00 19 19 08 15 04 b6 00 38 19 07 2a b4 00 1d b6 00 39 a7 00 0e 3a 09 19	..7..,*.........8..*.....9...:..
1200	09 b6 00 3b 04 b8 00 05 2a b4 00 2c 19 07 19 06 b6 00 3c 04 ac 00 03 00 c5 00 d2 00 d5 00 22 00	...;....*..,......<...........".
1220	fb 01 17 01 1a 00 2d 01 80 01 97 01 9a 00 3a 00 00 00 01 00 7c 00 76 00 01 00 77 00 00 01 39 00	......-.......:.....|.v...w...9.
1240	04 00 07 00 00 01 0d 01 4c bb 00 3d 59 2a b4 00 17 b7 00 3e 4c a7 00 0c 4d 2c b6 00 3b 04 b8 00	........L..=Y*.....>L...M,..;...
1260	05 01 4d bb 00 3f 59 2b 2a b4 00 0e b7 00 40 4d a7 00 0c 4e 2d b6 00 42 04 b8 00 05 bb 00 43 59	..M..?Y+*.....@M...N-..B......CY
1280	2a b4 00 0e 2a b4 00 19 b7 00 44 4e 03 36 04 bb 00 45 59 b7 00 46 3a 05 2c 2d b6 00 47 9a 00 06	*...*.....DN.6...EY..F:.,-..G...
12a0	a7 00 87 a7 00 0e 3a 06 19 06 b6 00 3b 04 b8 00 05 2a b4 00 2c 2d 01 b6 00 48 9a 00 24 84 04 ff	......:.....;....*..,-...H..$...
12c0	b2 00 0f bb 00 10 59 b7 00 11 2d b9 00 49 01 00 b6 00 13 12 4a b6 00 13 b6 00 15 b6 00 4b a7 00	......Y...-..I......J........K..
12e0	0e 3a 06 19 06 b6 00 2e 04 b8 00 05 84 04 01 15 04 11 01 f4 70 9a ff a3 b2 00 0f bb 00 10 59 b7	.:..................p.........Y.
1300	00 11 12 4c b6 00 13 15 04 b6 00 34 12 4d b6 00 13 19 05 b6 00 4e b6 00 34 12 4f b6 00 13 b6 00	...L.......4.M.......N..4.O.....
1320	15 b6 00 50 a7 ff 74 b2 00 0f bb 00 10 59 b7 00 11 12 4c b6 00 13 15 04 b6 00 34 12 4d b6 00 13	...P..t......Y....L.......4.M...
1340	19 05 b6 00 4e b6 00 34 12 4f b6 00 13 b6 00 15 b6 00 50 b1 00 04 00 02 00 0e 00 11 00 3a 00 1c	....N..4.O........P..........:..
1360	00 29 00 2c 00 41 00 51 00 59 00 5f 00 3a 00 6a 00 97 00 9a 00 2d 00 00 00 01 00 7d 00 76 00 01	.).,.A.Q.Y._.:.j.....-.....}.v..
1380	00 77 00 00 00 a5 00 02 00 03 00 00 00 99 bb 00 51 59 b7 00 52 4c 2a b6 00 53 b6 00 54 4d 2b 12	.w..............QY..RL*..S..TM+.
13a0	55 b6 00 56 57 2b 12 57 b6 00 56 57 2b 2c b6 00 56 57 2b 12 58 b6 00 56 57 2b 12 59 b6 00 56 57	U..VW+.W..VW+,..VW+.X..VW+.Y..VW
13c0	2b 12 5a b6 00 56 57 2b 12 5b b6 00 56 57 2b 12 5c b6 00 56 57 2b 12 5d b6 00 56 57 2b 12 5e b6	+.Z..VW+.[..VW+.\..VW+.]..VW+.^.
13e0	00 56 57 2b 12 5f b6 00 56 57 2b 12 60 b6 00 56 57 2b 12 61 b6 00 56 57 2b 12 62 b6 00 56 57 2b	.VW+._..VW+.`..VW+.a..VW+.b..VW+
1400	12 63 b6 00 56 57 2b b8 00 0b b6 00 64 b6 00 56 57 2b 12 65 b6 00 56 57 b2 00 66 2b b6 00 67 b6	.c..VW+.....d..VW+.e..VW..f+..g.
1420	00 68 03 b8 00 05 b1 00 00 00 00 00 08 00 7e 00 76 00 01 00 77 00 00 00 19 00 01 00 00 00 00 00	.h............~.v...w...........
1440	0d 13 00 02 b6 00 54 b8 00 69 b3 00 0f b1 00 00 00 00 00 00	......T..i..........