ofs | hex dump | ascii |
---|
0000 | ca fe ba be 00 00 00 31 00 a1 0a 00 34 00 42 09 00 0c 00 43 0a 00 44 00 45 07 00 46 0a 00 04 00 | .......1....4.B....C..D.E..F.... |
0020 | 42 08 00 47 0a 00 04 00 48 0a 00 34 00 49 0a 00 4a 00 4b 0a 00 04 00 4c 0a 00 44 00 4d 07 00 4e | B..G....H..4.I..J.K....L..D.M..N |
0040 | 0a 00 0c 00 42 0a 00 0c 00 4f 0a 00 50 00 51 0a 00 52 00 53 08 00 54 0a 00 52 00 55 0a 00 0c 00 | ....B....O..P.Q..R.S..T..R.U.... |
0060 | 56 0a 00 0c 00 57 07 00 58 0a 00 15 00 59 09 00 50 00 5a 08 00 5b 08 00 5c 0a 00 5d 00 5e 08 00 | V....W..X....Y..P.Z..[..\..].^.. |
0080 | 5f 0a 00 60 00 61 09 00 50 00 62 08 00 63 08 00 64 0a 00 5d 00 65 0b 00 66 00 67 08 00 68 07 00 | _..`.a..P.b..c..d..].e..f.g..h.. |
00a0 | 69 0a 00 23 00 42 08 00 6a 0a 00 23 00 6b 08 00 6c 08 00 6d 08 00 6e 0a 00 23 00 4c 07 00 6f 0a | i..#.B..j..#.k..l..m..n..#.L..o. |
00c0 | 00 2b 00 70 07 00 71 0a 00 2d 00 72 07 00 73 0a 00 2f 00 74 0a 00 2f 00 75 08 00 76 0a 00 44 00 | .+.p..q..-.r..s../.t../.u..v..D. |
00e0 | 77 07 00 78 01 00 06 6c 6f 67 67 65 72 01 00 1b 4c 6f 72 67 2f 61 70 61 63 68 65 2f 6c 6f 67 34 | w..x...logger...Lorg/apache/log4 |
0100 | 6a 2f 43 61 74 65 67 6f 72 79 3b 01 00 06 3c 69 6e 69 74 3e 01 00 03 28 29 56 01 00 04 43 6f 64 | j/Category;...<init>...()V...Cod |
0120 | 65 01 00 04 6d 61 69 6e 01 00 16 28 5b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 | e...main...([Ljava/lang/String;) |
0140 | 56 01 00 04 74 65 73 74 01 00 5f 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 4c 6a | V...test.._(Ljava/lang/String;Lj |
0160 | 6f 65 6c 69 62 32 2f 69 6f 2f 42 61 73 69 63 49 4f 54 79 70 65 3b 4c 6a 6f 65 6c 69 62 32 2f 69 | oelib2/io/BasicIOType;Ljoelib2/i |
0180 | 6f 2f 42 61 73 69 63 49 4f 54 79 70 65 3b 29 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 | o/BasicIOType;)Ljoelib2/molecule |
01a0 | 2f 4d 6f 6c 65 63 75 6c 65 3b 01 00 05 75 73 61 67 65 01 00 05 77 72 69 74 65 01 00 48 28 4c 6a | /Molecule;...usage...write..H(Lj |
01c0 | 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 4c 6a 61 76 61 2f 6c | oelib2/molecule/Molecule;Ljava/l |
01e0 | 61 6e 67 2f 53 74 72 69 6e 67 3b 4c 6a 6f 65 6c 69 62 32 2f 69 6f 2f 42 61 73 69 63 49 4f 54 79 | ang/String;Ljoelib2/io/BasicIOTy |
0200 | 70 65 3b 29 56 01 00 08 3c 63 6c 69 6e 69 74 3e 0c 00 37 00 38 0c 00 35 00 36 07 00 79 0c 00 7a | pe;)V...<clinit>..7.8..5.6..y..z |
0220 | 00 7b 01 00 17 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 42 75 69 6c 64 65 72 01 00 0b 49 | .{...java/lang/StringBuilder...I |
0240 | 6e 69 74 69 61 6c 69 7a 65 20 0c 00 7c 00 7d 0c 00 7e 00 7f 07 00 80 0c 00 81 00 82 0c 00 83 00 | nitialize...|.}..~.............. |
0260 | 82 0c 00 84 00 85 01 00 1d 6a 6f 65 6c 69 62 32 2f 65 78 61 6d 70 6c 65 2f 53 4d 49 4c 45 53 45 | .........joelib2/example/SMILESE |
0280 | 78 61 6d 70 6c 65 0c 00 3e 00 38 07 00 86 0c 00 87 00 88 07 00 89 0c 00 8a 00 8b 01 00 03 53 44 | xample..>.8...................SD |
02a0 | 46 0c 00 8c 00 8d 0c 00 3c 00 3d 0c 00 3f 00 40 01 00 27 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 | F.......<.=..?.@..'joelib2/molec |
02c0 | 75 6c 65 2f 42 61 73 69 63 43 6f 6e 66 6f 72 6d 65 72 4d 6f 6c 65 63 75 6c 65 0c 00 37 00 8e 0c | ule/BasicConformerMolecule..7... |
02e0 | 00 8f 00 90 01 00 18 47 65 6e 65 72 61 74 65 20 6d 6f 6c 65 63 75 6c 65 20 66 72 6f 6d 20 22 01 | .......Generate.molecule.from.". |
0300 | 00 01 22 07 00 91 0c 00 92 00 93 01 00 05 4e 61 6d 65 3a 07 00 94 0c 00 95 00 96 0c 00 97 00 90 | .."...........Name:............. |
0320 | 01 00 26 4d 6f 6c 65 63 75 6c 65 20 63 6f 75 6c 64 20 6e 6f 74 20 62 65 20 67 65 6e 65 72 61 74 | ..&Molecule.could.not.be.generat |
0340 | 65 64 20 66 72 6f 6d 20 22 01 00 02 22 2e 0c 00 92 00 85 07 00 98 0c 00 99 00 7b 01 00 0e 41 64 | ed.from."...".............{...Ad |
0360 | 64 20 68 79 64 72 6f 67 65 6e 73 3a 01 00 16 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 42 | d.hydrogens:...java/lang/StringB |
0380 | 75 66 66 65 72 01 00 0c 0a 55 73 61 67 65 20 69 73 20 3a 20 0c 00 7c 00 9a 01 00 0b 6a 61 76 61 | uffer....Usage.is.:...|.....java |
03a0 | 20 2d 63 70 20 2e 20 01 00 1b 3c 53 4d 49 4c 45 53 20 70 61 74 74 65 72 6e 3e 20 3c 53 44 46 20 | .-cp......<SMILES.pattern>.<SDF. |
03c0 | 66 69 6c 65 3e 01 00 42 0a 0a 54 68 69 73 20 69 73 20 76 65 72 73 69 6f 6e 20 24 52 65 76 69 73 | file>..B..This.is.version.$Revis |
03e0 | 69 6f 6e 3a 20 31 2e 38 20 24 20 28 24 44 61 74 65 3a 20 32 30 30 35 2f 30 32 2f 31 37 20 31 36 | ion:.1.8.$.($Date:.2005/02/17.16 |
0400 | 3a 34 38 3a 32 39 20 24 29 0a 01 00 18 6a 61 76 61 2f 69 6f 2f 46 69 6c 65 4f 75 74 70 75 74 53 | :48:29.$)....java/io/FileOutputS |
0420 | 74 72 65 61 6d 0c 00 37 00 93 01 00 13 6a 61 76 61 2f 6c 61 6e 67 2f 45 78 63 65 70 74 69 6f 6e | tream..7.....java/lang/Exception |
0440 | 0c 00 9b 00 38 01 00 1e 6a 6f 65 6c 69 62 32 2f 69 6f 2f 42 61 73 69 63 4d 6f 6c 65 63 75 6c 65 | ....8...joelib2/io/BasicMolecule |
0460 | 57 72 69 74 65 72 0c 00 37 00 9c 0c 00 9d 00 9e 01 00 15 45 72 72 6f 72 20 77 72 69 74 69 6e 67 | Writer..7..........Error.writing |
0480 | 20 53 4d 49 4c 45 53 2e 0c 00 9f 00 a0 01 00 10 6a 61 76 61 2f 6c 61 6e 67 2f 4f 62 6a 65 63 74 | .SMILES.........java/lang/Object |
04a0 | 01 00 19 6f 72 67 2f 61 70 61 63 68 65 2f 6c 6f 67 34 6a 2f 43 61 74 65 67 6f 72 79 01 00 0e 69 | ...org/apache/log4j/Category...i |
04c0 | 73 44 65 62 75 67 45 6e 61 62 6c 65 64 01 00 03 28 29 5a 01 00 06 61 70 70 65 6e 64 01 00 2d 28 | sDebugEnabled...()Z...append..-( |
04e0 | 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 | Ljava/lang/String;)Ljava/lang/St |
0500 | 72 69 6e 67 42 75 69 6c 64 65 72 3b 01 00 08 67 65 74 43 6c 61 73 73 01 00 13 28 29 4c 6a 61 76 | ringBuilder;...getClass...()Ljav |
0520 | 61 2f 6c 61 6e 67 2f 43 6c 61 73 73 3b 01 00 0f 6a 61 76 61 2f 6c 61 6e 67 2f 43 6c 61 73 73 01 | a/lang/Class;...java/lang/Class. |
0540 | 00 07 67 65 74 4e 61 6d 65 01 00 14 28 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b | ..getName...()Ljava/lang/String; |
0560 | 01 00 08 74 6f 53 74 72 69 6e 67 01 00 05 64 65 62 75 67 01 00 15 28 4c 6a 61 76 61 2f 6c 61 6e | ...toString...debug...(Ljava/lan |
0580 | 67 2f 4f 62 6a 65 63 74 3b 29 56 01 00 10 6a 61 76 61 2f 6c 61 6e 67 2f 53 79 73 74 65 6d 01 00 | g/Object;)V...java/lang/System.. |
05a0 | 04 65 78 69 74 01 00 04 28 49 29 56 01 00 1c 6a 6f 65 6c 69 62 32 2f 69 6f 2f 42 61 73 69 63 49 | .exit...(I)V...joelib2/io/BasicI |
05c0 | 4f 54 79 70 65 48 6f 6c 64 65 72 01 00 08 69 6e 73 74 61 6e 63 65 01 00 20 28 29 4c 6a 6f 65 6c | OTypeHolder...instance...()Ljoel |
05e0 | 69 62 32 2f 69 6f 2f 42 61 73 69 63 49 4f 54 79 70 65 48 6f 6c 64 65 72 3b 01 00 09 67 65 74 49 | ib2/io/BasicIOTypeHolder;...getI |
0600 | 4f 54 79 70 65 01 00 2c 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6a 6f 65 | OType..,(Ljava/lang/String;)Ljoe |
0620 | 6c 69 62 32 2f 69 6f 2f 42 61 73 69 63 49 4f 54 79 70 65 3b 01 00 29 28 4c 6a 6f 65 6c 69 62 32 | lib2/io/BasicIOType;..)(Ljoelib2 |
0640 | 2f 69 6f 2f 49 4f 54 79 70 65 3b 4c 6a 6f 65 6c 69 62 32 2f 69 6f 2f 49 4f 54 79 70 65 3b 29 56 | /io/IOType;Ljoelib2/io/IOType;)V |
0660 | 01 00 03 6f 75 74 01 00 15 4c 6a 61 76 61 2f 69 6f 2f 50 72 69 6e 74 53 74 72 65 61 6d 3b 01 00 | ...out...Ljava/io/PrintStream;.. |
0680 | 13 6a 61 76 61 2f 69 6f 2f 50 72 69 6e 74 53 74 72 65 61 6d 01 00 07 70 72 69 6e 74 6c 6e 01 00 | .java/io/PrintStream...println.. |
06a0 | 15 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 56 01 00 1b 6a 6f 65 6c 69 62 32 | .(Ljava/lang/String;)V...joelib2 |
06c0 | 2f 73 6d 69 6c 65 73 2f 53 4d 49 4c 45 53 50 61 72 73 65 72 01 00 0f 73 6d 69 6c 65 73 32 6d 6f | /smiles/SMILESParser...smiles2mo |
06e0 | 6c 65 63 75 6c 65 01 00 42 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 | lecule..B(Ljoelib2/molecule/Mole |
0700 | 63 75 6c 65 3b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 4c 6a 61 76 61 2f 6c 61 6e | cule;Ljava/lang/String;Ljava/lan |
0720 | 67 2f 53 74 72 69 6e 67 3b 29 5a 01 00 03 65 72 72 01 00 19 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 | g/String;)Z...err...joelib2/mole |
0740 | 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 01 00 0c 61 64 64 48 79 64 72 6f 67 65 6e 73 01 00 2c 28 | cule/Molecule...addHydrogens..,( |
0760 | 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 | Ljava/lang/String;)Ljava/lang/St |
0780 | 72 69 6e 67 42 75 66 66 65 72 3b 01 00 0f 70 72 69 6e 74 53 74 61 63 6b 54 72 61 63 65 01 00 2c | ringBuffer;...printStackTrace.., |
07a0 | 28 4c 6a 61 76 61 2f 69 6f 2f 4f 75 74 70 75 74 53 74 72 65 61 6d 3b 4c 6a 6f 65 6c 69 62 32 2f | (Ljava/io/OutputStream;Ljoelib2/ |
07c0 | 69 6f 2f 49 4f 54 79 70 65 3b 29 56 01 00 09 77 72 69 74 65 4e 65 78 74 01 00 1e 28 4c 6a 6f 65 | io/IOType;)V...writeNext...(Ljoe |
07e0 | 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 29 5a 01 00 0b 67 65 74 49 | lib2/molecule/Molecule;)Z...getI |
0800 | 6e 73 74 61 6e 63 65 01 00 2f 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6f | nstance../(Ljava/lang/String;)Lo |
0820 | 72 67 2f 61 70 61 63 68 65 2f 6c 6f 67 34 6a 2f 43 61 74 65 67 6f 72 79 3b 00 21 00 0c 00 34 00 | rg/apache/log4j/Category;.!...4. |
0840 | 00 00 01 00 0a 00 35 00 36 00 00 00 06 00 01 00 37 00 38 00 01 00 39 00 00 00 39 00 03 00 01 00 | ......5.6.......7.8...9...9..... |
0860 | 00 00 2d 2a b7 00 01 b2 00 02 b6 00 03 99 00 22 b2 00 02 bb 00 04 59 b7 00 05 12 06 b6 00 07 2a | ..-*..........."......Y........* |
0880 | b6 00 08 b6 00 09 b6 00 07 b6 00 0a b6 00 0b b1 00 00 00 00 00 09 00 3a 00 3b 00 01 00 39 00 00 | .......................:.;...9.. |
08a0 | 00 52 00 05 00 03 00 00 00 46 bb 00 0c 59 b7 00 0d 4c 2a be 05 9f 00 0e 2b b6 00 0e 03 b8 00 0f | .R.......F...Y...L*.....+....... |
08c0 | a7 00 2b 2b 2a 03 32 b8 00 10 12 11 b6 00 12 b8 00 10 12 11 b6 00 12 b6 00 13 4d 2b 2c 2a 04 32 | ..++*.2...................M+,*.2 |
08e0 | b8 00 10 12 11 b6 00 12 b6 00 14 03 b8 00 0f b1 00 00 00 00 00 01 00 3c 00 3d 00 01 00 39 00 00 | .......................<.=...9.. |
0900 | 00 92 00 04 00 05 00 00 00 86 bb 00 15 59 2c 2d b7 00 16 3a 04 b2 00 17 bb 00 04 59 b7 00 05 12 | .............Y,-...:.......Y.... |
0920 | 18 b6 00 07 2b b6 00 07 12 19 b6 00 07 b6 00 0a b6 00 1a 19 04 2b bb 00 04 59 b7 00 05 12 1b b6 | ....+................+...Y...... |
0940 | 00 07 2b b6 00 07 b6 00 0a b8 00 1c 9a 00 21 b2 00 1d bb 00 04 59 b7 00 05 12 1e b6 00 07 2b b6 | ..+...........!......Y........+. |
0960 | 00 07 12 1f b6 00 07 b6 00 0a b6 00 1a b2 00 17 19 04 b6 00 20 19 04 b9 00 21 01 00 57 b2 00 17 | .........................!..W... |
0980 | 12 22 b6 00 1a b2 00 17 19 04 b6 00 20 19 04 b0 00 00 00 00 00 01 00 3e 00 38 00 01 00 39 00 00 | .".....................>.8...9.. |
09a0 | 00 4d 00 02 00 03 00 00 00 41 bb 00 23 59 b7 00 24 4c 2a b6 00 08 b6 00 09 4d 2b 12 25 b6 00 26 | .M.......A..#Y..$L*......M+.%..& |
09c0 | 57 2b 12 27 b6 00 26 57 2b 2c b6 00 26 57 2b 12 28 b6 00 26 57 2b 12 29 b6 00 26 57 b2 00 17 2b | W+.'..&W+,..&W+.(..&W+.)..&W...+ |
09e0 | b6 00 2a b6 00 1a 03 b8 00 0f b1 00 00 00 00 00 01 00 3f 00 40 00 01 00 39 00 00 00 63 00 04 00 | ..*...............?.@...9...c... |
0a00 | 06 00 00 00 47 01 3a 04 bb 00 2b 59 2c b7 00 2c 3a 04 a7 00 0e 3a 05 19 05 b6 00 2e 04 b8 00 0f | ....G.:...+Y,..,:....:.......... |
0a20 | bb 00 2f 59 19 04 2d b7 00 30 3a 05 19 05 2b b6 00 31 9a 00 0b b2 00 1d 12 32 b6 00 1a a7 00 0e | ../Y..-..0:...+..1.......2...... |
0a40 | 3a 05 19 05 b6 00 2e 04 b8 00 0f b1 00 02 00 03 00 0d 00 10 00 2d 00 1b 00 38 00 3b 00 2d 00 00 | :....................-...8.;.-.. |
0a60 | 00 08 00 41 00 38 00 01 00 39 00 00 00 19 00 01 00 00 00 00 00 0d 13 00 0c b6 00 09 b8 00 33 b3 | ...A.8...9....................3. |
0a80 | 00 02 b1 00 00 00 00 00 00 | ......... |