summaryrefslogtreecommitdiff
path: root/java/joelib2/feature/types/SMILESMolecule.class
blob: bc3fb3f61091b9f692f699776eadbf1bb3636e6e (plain)
ofshex dumpascii
0000 ca fe ba be 00 00 00 31 00 9b 0a 00 27 00 53 0a 00 27 00 54 08 00 55 08 00 56 0a 00 57 00 58 09 .......1....'.S..'.T..U..V..W.X.
0020 00 08 00 59 09 00 08 00 5a 07 00 5b 0a 00 26 00 5c 08 00 5d 08 00 5e 0a 00 5f 00 60 08 00 61 0a ...Y....Z..[..&.\..]..^.._.`..a.
0040 00 62 00 63 0a 00 64 00 5c 0a 00 62 00 65 0a 00 08 00 66 07 00 67 09 00 08 00 68 07 00 69 0a 00 .b.c..d.\..b.e....f..g....h..i..
0060 14 00 53 0a 00 14 00 6a 08 00 6b 08 00 6c 0a 00 26 00 6d 0a 00 14 00 6d 0a 00 6e 00 6f 0a 00 08 ..S....j..k..l..&.m....m..n.o...
0080 00 70 0b 00 1e 00 71 07 00 72 0a 00 12 00 73 07 00 74 0a 00 64 00 75 0a 00 20 00 76 0a 00 08 00 .p....q..r....s..t..d.u....v....
00a0 5c 0a 00 5f 00 77 0a 00 6e 00 78 07 00 79 07 00 7a 07 00 7b 01 00 06 56 45 4e 44 4f 52 01 00 12 \.._.w..n.x..y..z..{...VENDOR...
00c0 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 01 00 0d 43 6f 6e 73 74 61 6e 74 56 61 6c Ljava/lang/String;...ConstantVal
00e0 75 65 01 00 0f 52 45 4c 45 41 53 45 5f 56 45 52 53 49 4f 4e 01 00 0c 52 45 4c 45 41 53 45 5f 44 ue...RELEASE_VERSION...RELEASE_D
0100 41 54 45 01 00 06 6c 6f 67 67 65 72 01 00 1b 4c 6f 72 67 2f 61 70 61 63 68 65 2f 6c 6f 67 34 6a ATE...logger...Lorg/apache/log4j
0120 2f 43 61 74 65 67 6f 72 79 3b 01 00 0c 44 45 50 45 4e 44 45 4e 43 49 45 53 01 00 12 5b 4c 6a 61 /Category;...DEPENDENCIES...[Lja
0140 76 61 2f 6c 61 6e 67 2f 43 6c 61 73 73 3b 01 00 08 64 65 73 63 49 6e 66 6f 01 00 22 4c 6a 6f 65 va/lang/Class;...descInfo.."Ljoe
0160 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 42 61 73 69 63 46 65 61 74 75 72 65 49 6e 66 6f 3b 01 00 lib2/feature/BasicFeatureInfo;..
0180 06 3c 69 6e 69 74 3e 01 00 03 28 29 56 01 00 04 43 6f 64 65 01 00 0f 67 65 74 44 65 70 65 6e 64 .<init>...()V...Code...getDepend
01a0 65 6e 63 69 65 73 01 00 14 28 29 5b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 43 6c 61 73 73 3b 01 00 07 encies...()[Ljava/lang/Class;...
01c0 67 65 74 4e 61 6d 65 01 00 14 28 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 01 00 getName...()Ljava/lang/String;..
01e0 0e 67 65 74 52 65 6c 65 61 73 65 44 61 74 65 01 00 11 67 65 74 52 65 6c 65 61 73 65 56 65 72 73 .getReleaseDate...getReleaseVers
0200 69 6f 6e 01 00 09 67 65 74 56 65 6e 64 6f 72 01 00 12 61 63 63 65 70 74 65 64 50 72 6f 70 65 72 ion...getVendor...acceptedProper
0220 74 69 65 73 01 00 1f 28 29 5b 4c 6a 6f 65 6c 69 62 32 2f 75 74 69 6c 2f 42 61 73 69 63 50 72 6f ties...()[Ljoelib2/util/BasicPro
0240 70 65 72 74 79 3b 01 00 09 63 61 6c 63 75 6c 61 74 65 01 00 3c 28 4c 6a 6f 65 6c 69 62 32 2f 6d perty;...calculate..<(Ljoelib2/m
0260 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 29 4c 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 olecule/Molecule;)Ljoelib2/featu
0280 72 65 2f 46 65 61 74 75 72 65 52 65 73 75 6c 74 3b 01 00 0a 45 78 63 65 70 74 69 6f 6e 73 07 00 re/FeatureResult;...Exceptions..
02a0 7c 01 00 4b 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b |..K(Ljoelib2/molecule/Molecule;
02c0 4c 6a 61 76 61 2f 75 74 69 6c 2f 4d 61 70 3b 29 4c 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 Ljava/util/Map;)Ljoelib2/feature
02e0 2f 46 65 61 74 75 72 65 52 65 73 75 6c 74 3b 01 00 5b 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 /FeatureResult;..[(Ljoelib2/mole
0300 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 4c 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 46 cule/Molecule;Ljoelib2/feature/F
0320 65 61 74 75 72 65 52 65 73 75 6c 74 3b 29 4c 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 46 eatureResult;)Ljoelib2/feature/F
0340 65 61 74 75 72 65 52 65 73 75 6c 74 3b 01 00 6a 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 eatureResult;..j(Ljoelib2/molecu
0360 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 4c 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 46 65 61 le/Molecule;Ljoelib2/feature/Fea
0380 74 75 72 65 52 65 73 75 6c 74 3b 4c 6a 61 76 61 2f 75 74 69 6c 2f 4d 61 70 3b 29 4c 6a 6f 65 6c tureResult;Ljava/util/Map;)Ljoel
03a0 69 62 32 2f 66 65 61 74 75 72 65 2f 46 65 61 74 75 72 65 52 65 73 75 6c 74 3b 01 00 05 63 6c 65 ib2/feature/FeatureResult;...cle
03c0 61 72 01 00 0b 67 65 74 44 65 73 63 49 6e 66 6f 01 00 24 28 29 4c 6a 6f 65 6c 69 62 32 2f 66 65 ar...getDescInfo..$()Ljoelib2/fe
03e0 61 74 75 72 65 2f 42 61 73 69 63 46 65 61 74 75 72 65 49 6e 66 6f 3b 01 00 0e 67 65 74 44 65 73 ature/BasicFeatureInfo;...getDes
0400 63 72 69 70 74 69 6f 6e 01 00 26 28 29 4c 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 46 65 cription..&()Ljoelib2/feature/Fe
0420 61 74 75 72 65 44 65 73 63 72 69 70 74 69 6f 6e 3b 01 00 1b 68 61 73 68 65 64 44 65 70 65 6e 64 atureDescription;...hashedDepend
0440 65 6e 63 79 54 72 65 65 56 65 72 73 69 6f 6e 01 00 03 28 29 49 01 00 0a 69 6e 69 74 69 61 6c 69 encyTreeVersion...()I...initiali
0460 7a 65 01 00 12 28 4c 6a 61 76 61 2f 75 74 69 6c 2f 4d 61 70 3b 29 5a 01 00 0e 74 65 73 74 44 65 ze...(Ljava/util/Map;)Z...testDe
0480 73 63 72 69 70 74 6f 72 01 00 03 28 29 5a 01 00 08 3c 63 6c 69 6e 69 74 3e 0c 00 34 00 35 0c 00 scriptor...()Z...<clinit>..4.5..
04a0 7d 00 7e 01 00 0e 6e 6f 5f 63 6f 6f 72 64 69 6e 61 74 65 73 01 00 23 6a 6f 65 6c 69 62 32 2e 66 }.~...no_coordinates..#joelib2.f
04c0 65 61 74 75 72 65 2e 72 65 73 75 6c 74 2e 53 4d 49 4c 45 53 52 65 73 75 6c 74 07 00 7f 0c 00 80 eature.result.SMILESResult......
04e0 00 81 0c 00 32 00 33 0c 00 30 00 31 01 00 24 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 74 ....2.3..0.1..$joelib2/feature/t
0500 79 70 65 73 2f 53 4d 49 4c 45 53 4d 6f 6c 65 63 75 6c 65 0c 00 39 00 3a 01 00 14 68 74 74 70 3a ypes/SMILESMolecule..9.:...http:
0520 2f 2f 6a 6f 65 6c 69 62 2e 73 66 2e 6e 65 74 01 00 10 24 52 65 76 69 73 69 6f 6e 3a 20 31 2e 39 //joelib.sf.net...$Revision:.1.9
0540 20 24 07 00 82 0c 00 83 00 84 01 00 1c 24 44 61 74 65 3a 20 32 30 30 35 2f 30 32 2f 31 37 20 31 .$...........$Date:.2005/02/17.1
0560 36 3a 34 38 3a 33 31 20 24 07 00 85 0c 00 86 00 87 07 00 88 0c 00 89 00 8a 0c 00 40 00 46 01 00 6:48:31.$..................@.F..
0580 23 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 72 65 73 75 6c 74 2f 53 4d 49 4c 45 53 52 65 #joelib2/feature/result/SMILESRe
05a0 73 75 6c 74 0c 00 2e 00 2f 01 00 17 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 42 75 69 6c sult..../...java/lang/StringBuil
05c0 64 65 72 0c 00 8b 00 8c 01 00 1a 20 72 65 73 75 6c 74 20 73 68 6f 75 6c 64 20 62 65 20 6f 66 20 der.........result.should.be.of.
05e0 74 79 70 65 20 01 00 12 20 62 75 74 20 69 74 27 73 20 6f 66 20 74 79 70 65 20 0c 00 8d 00 3a 07 type.....but.it's.of.type.....:.
0600 00 8e 0c 00 8f 00 90 0c 00 4e 00 4f 0c 00 91 00 92 01 00 19 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 .........N.O........joelib2/mole
0620 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 0c 00 93 00 94 01 00 27 6a 6f 65 6c 69 62 32 2f 66 65 61 cule/Molecule.......'joelib2/fea
0640 74 75 72 65 2f 42 61 73 69 63 46 65 61 74 75 72 65 44 65 73 63 72 69 70 74 69 6f 6e 0c 00 95 00 ture/BasicFeatureDescription....
0660 3a 0c 00 34 00 96 0c 00 97 00 98 0c 00 99 00 9a 01 00 0f 6a 61 76 61 2f 6c 61 6e 67 2f 43 6c 61 :..4...............java/lang/Cla
0680 73 73 01 00 10 6a 61 76 61 2f 6c 61 6e 67 2f 4f 62 6a 65 63 74 01 00 17 6a 6f 65 6c 69 62 32 2f ss...java/lang/Object...joelib2/
06a0 66 65 61 74 75 72 65 2f 46 65 61 74 75 72 65 01 00 20 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 feature/Feature...joelib2/featur
06c0 65 2f 46 65 61 74 75 72 65 45 78 63 65 70 74 69 6f 6e 01 00 08 67 65 74 43 6c 61 73 73 01 00 13 e/FeatureException...getClass...
06e0 28 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 43 6c 61 73 73 3b 01 00 1d 6a 6f 65 6c 69 62 32 2f 66 65 ()Ljava/lang/Class;...joelib2/fe
0700 61 74 75 72 65 2f 46 65 61 74 75 72 65 48 65 6c 70 65 72 01 00 13 67 65 6e 65 72 61 74 65 46 65 ature/FeatureHelper...generateFe
0720 61 74 75 72 65 49 6e 66 6f 01 00 6b 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 43 6c 61 73 73 3b 4c 6a atureInfo..k(Ljava/lang/Class;Lj
0740 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e ava/lang/String;Ljava/lang/Strin
0760 67 3b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6a 6f 65 6c 69 62 32 2f 66 65 g;Ljava/lang/String;)Ljoelib2/fe
0780 61 74 75 72 65 2f 42 61 73 69 63 46 65 61 74 75 72 65 49 6e 66 6f 3b 01 00 23 6a 6f 65 6c 69 62 ature/BasicFeatureInfo;..#joelib
07a0 32 2f 64 61 74 61 2f 49 64 65 6e 74 69 66 69 65 72 45 78 70 65 72 74 53 79 73 74 65 6d 01 00 0f 2/data/IdentifierExpertSystem...
07c0 74 72 61 6e 73 66 6f 72 6d 43 56 53 74 61 67 01 00 26 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 transformCVStag..&(Ljava/lang/St
07e0 72 69 6e 67 3b 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 01 00 1d 6a 6f 65 6c 69 ring;)Ljava/lang/String;...joeli
0800 62 32 2f 66 65 61 74 75 72 65 2f 52 65 73 75 6c 74 46 61 63 74 6f 72 79 01 00 08 69 6e 73 74 61 b2/feature/ResultFactory...insta
0820 6e 63 65 01 00 21 28 29 4c 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 52 65 73 75 6c 74 46 nce..!()Ljoelib2/feature/ResultF
0840 61 63 74 6f 72 79 3b 01 00 20 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 42 61 73 69 63 46 actory;...joelib2/feature/BasicF
0860 65 61 74 75 72 65 49 6e 66 6f 01 00 10 67 65 74 46 65 61 74 75 72 65 52 65 73 75 6c 74 01 00 33 eatureInfo...getFeatureResult..3
0880 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6a 6f 65 6c 69 62 32 2f 66 65 61 (Ljava/lang/String;)Ljoelib2/fea
08a0 74 75 72 65 2f 46 65 61 74 75 72 65 52 65 73 75 6c 74 3b 01 00 06 61 70 70 65 6e 64 01 00 2d 28 ture/FeatureResult;...append..-(
08c0 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 Ljava/lang/String;)Ljava/lang/St
08e0 72 69 6e 67 42 75 69 6c 64 65 72 3b 01 00 08 74 6f 53 74 72 69 6e 67 01 00 19 6f 72 67 2f 61 70 ringBuilder;...toString...org/ap
0900 61 63 68 65 2f 6c 6f 67 34 6a 2f 43 61 74 65 67 6f 72 79 01 00 05 65 72 72 6f 72 01 00 15 28 4c ache/log4j/Category...error...(L
0920 6a 61 76 61 2f 6c 61 6e 67 2f 4f 62 6a 65 63 74 3b 29 56 01 00 05 63 6c 6f 6e 65 01 00 15 28 5a java/lang/Object;)V...clone...(Z
0940 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 4f 62 6a 65 63 74 3b 01 00 0b 73 65 74 4d 6f 6c 65 63 75 6c )Ljava/lang/Object;...setMolecul
0960 65 01 00 1e 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b e...(Ljoelib2/molecule/Molecule;
0980 29 56 01 00 12 67 65 74 44 65 73 63 72 69 70 74 69 6f 6e 46 69 6c 65 01 00 15 28 4c 6a 61 76 61 )V...getDescriptionFile...(Ljava
09a0 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 56 01 00 15 67 65 74 44 65 70 65 6e 64 65 6e 63 79 54 /lang/String;)V...getDependencyT
09c0 72 65 65 48 61 73 68 01 00 15 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 49 01 reeHash...(Ljava/lang/String;)I.
09e0 00 0b 67 65 74 49 6e 73 74 61 6e 63 65 01 00 2f 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 ..getInstance../(Ljava/lang/Stri
0a00 6e 67 3b 29 4c 6f 72 67 2f 61 70 61 63 68 65 2f 6c 6f 67 34 6a 2f 43 61 74 65 67 6f 72 79 3b 00 ng;)Lorg/apache/log4j/Category;.
0a20 21 00 08 00 27 00 01 00 28 00 06 00 1a 00 29 00 2a 00 01 00 2b 00 00 00 02 00 0a 00 1a 00 2c 00 !...'...(.....).*...+.........,.
0a40 2a 00 01 00 2b 00 00 00 02 00 0b 00 1a 00 2d 00 2a 00 01 00 2b 00 00 00 02 00 0d 00 0a 00 2e 00 *...+.........-.*...+...........
0a60 2f 00 00 00 1a 00 30 00 31 00 00 00 02 00 32 00 33 00 00 00 12 00 01 00 34 00 35 00 01 00 36 00 /.....0.1.....2.3.......4.5...6.
0a80 00 00 21 00 05 00 01 00 00 00 15 2a b7 00 01 2a 2a b6 00 02 12 03 01 12 04 b8 00 05 b5 00 06 b1 ..!........*...**...............
0aa0 00 00 00 00 00 09 00 37 00 38 00 01 00 36 00 00 00 10 00 01 00 00 00 00 00 04 b2 00 07 b0 00 00 .......7.8...6..................
0ac0 00 00 00 09 00 39 00 3a 00 01 00 36 00 00 00 13 00 01 00 00 00 00 00 07 13 00 08 b6 00 09 b0 00 .....9.:...6....................
0ae0 00 00 00 00 09 00 3b 00 3a 00 01 00 36 00 00 00 0f 00 01 00 00 00 00 00 03 12 0a b0 00 00 00 00 ......;.:...6...................
0b00 00 09 00 3c 00 3a 00 01 00 36 00 00 00 12 00 01 00 00 00 00 00 06 12 0b b8 00 0c b0 00 00 00 00 ...<.:...6......................
0b20 00 09 00 3d 00 3a 00 01 00 36 00 00 00 12 00 01 00 00 00 00 00 06 12 0d b8 00 0c b0 00 00 00 00 ...=.:...6......................
0b40 00 01 00 3e 00 3f 00 01 00 36 00 00 00 0e 00 01 00 01 00 00 00 02 01 b0 00 00 00 00 00 01 00 40 ...>.?...6.....................@
0b60 00 41 00 02 00 36 00 00 00 22 00 04 00 03 00 00 00 16 b8 00 0e 2a b4 00 06 b6 00 0f b6 00 10 4d .A...6..."...........*.........M
0b80 2a 2b 2c 01 b6 00 11 b0 00 00 00 00 00 42 00 00 00 04 00 01 00 43 00 01 00 40 00 44 00 02 00 36 *+,..........B.......C...@.D...6
0ba0 00 00 00 22 00 04 00 04 00 00 00 16 b8 00 0e 2a b4 00 06 b6 00 0f b6 00 10 4e 2a 2b 2d 2c b6 00 ..."...........*.........N*+-,..
0bc0 11 b0 00 00 00 00 00 42 00 00 00 04 00 01 00 43 00 01 00 40 00 45 00 02 00 36 00 00 00 14 00 04 .......B.......C...@.E...6......
0be0 00 03 00 00 00 08 2a 2b 2c 01 b6 00 11 b0 00 00 00 00 00 42 00 00 00 04 00 01 00 43 00 01 00 40 ......*+,..........B.......C...@
0c00 00 46 00 02 00 36 00 00 00 75 00 03 00 06 00 00 00 69 01 3a 04 2c c1 00 12 9a 00 3c b2 00 13 bb .F...6...u.......i.:.,.....<....
0c20 00 14 59 b7 00 15 2a b4 00 06 b6 00 0f b6 00 16 12 17 b6 00 16 13 00 12 b6 00 09 b6 00 16 12 18 ..Y...*.........................
0c40 b6 00 16 2c b6 00 02 b6 00 19 b6 00 16 b6 00 1a b6 00 1b 01 b0 2c c0 00 12 3a 04 2a 2d b6 00 1c ...,.................,...:.*-...
0c60 9a 00 05 01 b0 2b 03 b9 00 1d 02 00 c0 00 1e 3a 05 19 04 19 05 b6 00 1f 19 04 b0 00 00 00 00 00 .....+.........:................
0c80 42 00 00 00 04 00 01 00 43 00 01 00 47 00 35 00 01 00 36 00 00 00 0d 00 00 00 01 00 00 00 01 b1 B.......C...G.5...6.............
0ca0 00 00 00 00 00 01 00 48 00 49 00 01 00 36 00 00 00 11 00 01 00 01 00 00 00 05 2a b4 00 06 b0 00 .......H.I...6............*.....
0cc0 00 00 00 00 01 00 4a 00 4b 00 01 00 36 00 00 00 1b 00 03 00 01 00 00 00 0f bb 00 20 59 2a b4 00 ......J.K...6...............Y*..
0ce0 06 b6 00 21 b7 00 22 b0 00 00 00 00 00 01 00 4c 00 4d 00 01 00 36 00 00 00 13 00 01 00 01 00 00 ...!.."........L.M...6..........
0d00 00 07 b8 00 23 b8 00 24 ac 00 00 00 00 00 01 00 4e 00 4f 00 01 00 36 00 00 00 0e 00 01 00 02 00 ....#..$........N.O...6.........
0d20 00 00 02 04 ac 00 00 00 00 00 01 00 50 00 51 00 01 00 36 00 00 00 0e 00 01 00 01 00 00 00 02 04 ............P.Q...6.............
0d40 ac 00 00 00 00 00 08 00 52 00 35 00 01 00 36 00 00 00 20 00 01 00 00 00 00 00 14 13 00 08 b6 00 ........R.5...6.................
0d60 09 b8 00 25 b3 00 13 03 bd 00 26 b3 00 07 b1 00 00 00 00 00 00 ...%......&..........