summaryrefslogtreecommitdiff
path: root/java/joelib2/feature/types/atomlabel/AtomValenceSum.class
blob: 5b820861aab1f906c9b012427d08c7ae8969f591 (plain)
ofshex dumpascii
0000 ca fe ba be 00 00 00 31 00 9c 0a 00 28 00 44 09 00 17 00 45 0a 00 46 00 47 07 00 48 0a 00 04 00 .......1....(.D....E..F.G..H....
0020 44 08 00 49 0a 00 04 00 4a 0a 00 4b 00 4c 0a 00 25 00 4d 0a 00 04 00 4e 0a 00 46 00 4f 08 00 50 D..I....J..K.L..%.M....N..F.O..P
0040 07 00 51 0a 00 52 00 53 09 00 17 00 54 0a 00 55 00 56 09 00 17 00 57 0a 00 17 00 4d 0a 00 58 00 ..Q..R.S....T..U.V....W....M..X.
0060 59 07 00 5a 0a 00 14 00 5b 0a 00 46 00 5c 07 00 5d 08 00 5e 08 00 5f 0a 00 60 00 61 08 00 62 0b Y..Z....[..F.\..]..^.._..`.a..b.
0080 00 63 00 64 08 00 65 0b 00 63 00 66 0a 00 67 00 68 07 00 69 0b 00 6a 00 6b 0b 00 6a 00 6c 0a 00 .c.d..e..c.f..g.h..i..j.k..j.l..
00a0 60 00 6d 0a 00 46 00 6e 07 00 6f 07 00 70 07 00 71 07 00 72 01 00 06 56 45 4e 44 4f 52 01 00 12 `.m..F.n..o..p..q..r...VENDOR...
00c0 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 01 00 0d 43 6f 6e 73 74 61 6e 74 56 61 6c Ljava/lang/String;...ConstantVal
00e0 75 65 01 00 0f 52 45 4c 45 41 53 45 5f 56 45 52 53 49 4f 4e 01 00 0c 52 45 4c 45 41 53 45 5f 44 ue...RELEASE_VERSION...RELEASE_D
0100 41 54 45 01 00 06 6c 6f 67 67 65 72 01 00 1b 4c 6f 72 67 2f 61 70 61 63 68 65 2f 6c 6f 67 34 6a ATE...logger...Lorg/apache/log4j
0120 2f 43 61 74 65 67 6f 72 79 3b 01 00 0c 44 45 50 45 4e 44 45 4e 43 49 45 53 01 00 12 5b 4c 6a 61 /Category;...DEPENDENCIES...[Lja
0140 76 61 2f 6c 61 6e 67 2f 43 6c 61 73 73 3b 01 00 06 3c 69 6e 69 74 3e 01 00 03 28 29 56 01 00 04 va/lang/Class;...<init>...()V...
0160 43 6f 64 65 01 00 13 63 61 6c 63 75 6c 61 74 65 56 61 6c 65 6e 63 65 53 75 6d 01 00 1a 28 4c 6a Code...calculateValenceSum...(Lj
0180 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 41 74 6f 6d 3b 29 49 01 00 0f 67 65 74 44 65 70 oelib2/molecule/Atom;)I...getDep
01a0 65 6e 64 65 6e 63 69 65 73 01 00 14 28 29 5b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 43 6c 61 73 73 3b endencies...()[Ljava/lang/Class;
01c0 01 00 0b 67 65 74 49 6e 74 56 61 6c 75 65 01 00 07 67 65 74 4e 61 6d 65 01 00 14 28 29 4c 6a 61 ...getIntValue...getName...()Lja
01e0 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 01 00 0e 67 65 74 52 65 6c 65 61 73 65 44 61 74 65 va/lang/String;...getReleaseDate
0200 01 00 11 67 65 74 52 65 6c 65 61 73 65 56 65 72 73 69 6f 6e 01 00 09 67 65 74 56 65 6e 64 6f 72 ...getReleaseVersion...getVendor
0220 01 00 16 67 65 74 41 74 6f 6d 50 72 6f 70 65 72 74 69 65 73 41 72 72 61 79 01 00 2f 28 4c 6a 6f ...getAtomPropertiesArray../(Ljo
0240 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 29 4c 6a 61 76 61 2f 6c elib2/molecule/Molecule;)Ljava/l
0260 61 6e 67 2f 4f 62 6a 65 63 74 3b 01 00 1b 68 61 73 68 65 64 44 65 70 65 6e 64 65 6e 63 79 54 72 ang/Object;...hashedDependencyTr
0280 65 65 56 65 72 73 69 6f 6e 01 00 03 28 29 49 01 00 08 3c 63 6c 69 6e 69 74 3e 0c 00 32 00 33 0c eeVersion...()I...<clinit>..2.3.
02a0 00 2e 00 2f 07 00 73 0c 00 74 00 75 01 00 17 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 42 .../..s..t.u...java/lang/StringB
02c0 75 69 6c 64 65 72 01 00 0b 49 6e 69 74 69 61 6c 69 7a 65 20 0c 00 76 00 77 07 00 78 0c 00 79 00 uilder...Initialize...v.w..x..y.
02e0 7a 0c 00 3a 00 3b 0c 00 7b 00 3b 0c 00 7c 00 7d 01 00 0e 6e 6f 5f 63 6f 6f 72 64 69 6e 61 74 65 z..:.;..{.;..|.}...no_coordinate
0300 73 01 00 28 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 72 65 73 75 6c 74 2f 41 74 6f 6d 44 s..(joelib2/feature/result/AtomD
0320 79 6e 61 6d 69 63 52 65 73 75 6c 74 07 00 7e 0c 00 7f 00 80 0c 00 81 00 82 07 00 83 0c 00 84 00 ynamicResult..~.................
0340 36 0c 00 30 00 31 07 00 85 0c 00 86 00 87 01 00 20 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 6..0.1...........joelib2/feature
0360 2f 46 65 61 74 75 72 65 45 78 63 65 70 74 69 6f 6e 0c 00 88 00 3b 0c 00 89 00 7d 01 00 2e 6a 6f /FeatureException....;....}...jo
0380 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 74 79 70 65 73 2f 61 74 6f 6d 6c 61 62 65 6c 2f 41 74 elib2/feature/types/atomlabel/At
03a0 6f 6d 56 61 6c 65 6e 63 65 53 75 6d 01 00 14 68 74 74 70 3a 2f 2f 6a 6f 65 6c 69 62 2e 73 66 2e omValenceSum...http://joelib.sf.
03c0 6e 65 74 01 00 11 24 52 65 76 69 73 69 6f 6e 3a 20 31 2e 31 34 20 24 07 00 8a 0c 00 8b 00 8c 01 net...$Revision:.1.14.$.........
03e0 00 1c 24 44 61 74 65 3a 20 32 30 30 35 2f 30 32 2f 31 37 20 31 36 3a 34 38 3a 33 31 20 24 07 00 ..$Date:.2005/02/17.16:48:31.$..
0400 8d 0c 00 8e 00 8f 01 00 03 69 6e 74 0c 00 90 00 42 07 00 91 0c 00 92 00 93 01 00 02 5b 49 07 00 .........int....B...........[I..
0420 94 0c 00 95 00 75 0c 00 96 00 97 0c 00 98 00 99 0c 00 9a 00 9b 01 00 0f 6a 61 76 61 2f 6c 61 6e .....u..................java/lan
0440 67 2f 43 6c 61 73 73 01 00 33 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 74 79 70 65 73 2f g/Class..3joelib2/feature/types/
0460 61 74 6f 6d 6c 61 62 65 6c 2f 41 74 6f 6d 49 6d 70 6c 69 63 69 74 56 61 6c 65 6e 63 65 01 00 2e atomlabel/AtomImplicitValence...
0480 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 74 79 70 65 73 2f 62 6f 6e 64 6c 61 62 65 6c 2f joelib2/feature/types/bondlabel/
04a0 42 6f 6e 64 4b 65 6b 75 6c 65 54 79 70 65 01 00 2b 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 BondKekuleType..+joelib2/feature
04c0 2f 41 62 73 74 72 61 63 74 44 79 6e 61 6d 69 63 41 74 6f 6d 50 72 6f 70 65 72 74 79 01 00 19 6f /AbstractDynamicAtomProperty...o
04e0 72 67 2f 61 70 61 63 68 65 2f 6c 6f 67 34 6a 2f 43 61 74 65 67 6f 72 79 01 00 0e 69 73 44 65 62 rg/apache/log4j/Category...isDeb
0500 75 67 45 6e 61 62 6c 65 64 01 00 03 28 29 5a 01 00 06 61 70 70 65 6e 64 01 00 2d 28 4c 6a 61 76 ugEnabled...()Z...append..-(Ljav
0520 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 a/lang/String;)Ljava/lang/String
0540 42 75 69 6c 64 65 72 3b 01 00 10 6a 61 76 61 2f 6c 61 6e 67 2f 4f 62 6a 65 63 74 01 00 08 67 65 Builder;...java/lang/Object...ge
0560 74 43 6c 61 73 73 01 00 13 28 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 43 6c 61 73 73 3b 01 00 08 74 tClass...()Ljava/lang/Class;...t
0580 6f 53 74 72 69 6e 67 01 00 05 64 65 62 75 67 01 00 15 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 4f 62 oString...debug...(Ljava/lang/Ob
05a0 6a 65 63 74 3b 29 56 01 00 1d 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 46 65 61 74 75 72 ject;)V...joelib2/feature/Featur
05c0 65 48 65 6c 70 65 72 01 00 13 67 65 6e 65 72 61 74 65 46 65 61 74 75 72 65 49 6e 66 6f 01 00 6b eHelper...generateFeatureInfo..k
05e0 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 43 6c 61 73 73 3b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 (Ljava/lang/Class;Ljava/lang/Str
0600 69 6e 67 3b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 4c 6a 61 76 61 2f 6c 61 6e 67 ing;Ljava/lang/String;Ljava/lang
0620 2f 53 74 72 69 6e 67 3b 29 4c 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 42 61 73 69 63 46 /String;)Ljoelib2/feature/BasicF
0640 65 61 74 75 72 65 49 6e 66 6f 3b 01 00 08 64 65 73 63 49 6e 66 6f 01 00 22 4c 6a 6f 65 6c 69 62 eatureInfo;...descInfo.."Ljoelib
0660 32 2f 66 65 61 74 75 72 65 2f 42 61 73 69 63 46 65 61 74 75 72 65 49 6e 66 6f 3b 01 00 32 6a 6f 2/feature/BasicFeatureInfo;..2jo
0680 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 74 79 70 65 73 2f 61 74 6f 6d 6c 61 62 65 6c 2f 41 62 elib2/feature/types/atomlabel/Ab
06a0 73 74 72 61 63 74 56 61 6c 65 6e 63 65 53 75 6d 01 00 09 63 61 6c 63 75 6c 61 74 65 01 00 29 6a stractValenceSum...calculate..)j
06c0 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 74 79 70 65 73 2f 41 74 6f 6d 50 72 6f 70 65 72 oelib2/molecule/types/AtomProper
06e0 74 79 48 65 6c 70 65 72 01 00 12 67 65 74 49 6e 74 41 74 6f 6d 50 72 6f 70 65 72 74 79 01 00 2d tyHelper...getIntAtomProperty..-
0700 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 41 74 6f 6d 3b 4c 6a 61 76 61 2f 6c 61 (Ljoelib2/molecule/Atom;Ljava/la
0720 6e 67 2f 53 74 72 69 6e 67 3b 5a 29 49 01 00 0a 67 65 74 4d 65 73 73 61 67 65 01 00 05 65 72 72 ng/String;Z)I...getMessage...err
0740 6f 72 01 00 23 6a 6f 65 6c 69 62 32 2f 64 61 74 61 2f 49 64 65 6e 74 69 66 69 65 72 45 78 70 65 or..#joelib2/data/IdentifierExpe
0760 72 74 53 79 73 74 65 6d 01 00 0f 74 72 61 6e 73 66 6f 72 6d 43 56 53 74 61 67 01 00 26 28 4c 6a rtSystem...transformCVStag..&(Lj
0780 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 ava/lang/String;)Ljava/lang/Stri
07a0 6e 67 3b 01 00 19 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 01 ng;...joelib2/molecule/Molecule.
07c0 00 0c 61 74 6f 6d 49 74 65 72 61 74 6f 72 01 00 26 28 29 4c 6a 6f 65 6c 69 62 32 2f 75 74 69 6c ..atomIterator..&()Ljoelib2/util
07e0 2f 69 74 65 72 61 74 6f 72 2f 41 74 6f 6d 49 74 65 72 61 74 6f 72 3b 01 00 0c 67 65 74 41 74 6f /iterator/AtomIterator;...getAto
0800 6d 73 53 69 7a 65 01 00 29 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 72 65 73 75 6c 74 2f msSize..)joelib2/feature/result/
0820 44 79 6e 61 6d 69 63 41 72 72 61 79 52 65 73 75 6c 74 01 00 0b 67 65 74 4e 65 77 41 72 72 61 79 DynamicArrayResult...getNewArray
0840 01 00 27 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 49 29 4c 6a 61 76 61 2f 6c 61 ..'(Ljava/lang/String;I)Ljava/la
0860 6e 67 2f 4f 62 6a 65 63 74 3b 01 00 22 6a 6f 65 6c 69 62 32 2f 75 74 69 6c 2f 69 74 65 72 61 74 ng/Object;.."joelib2/util/iterat
0880 6f 72 2f 41 74 6f 6d 49 74 65 72 61 74 6f 72 01 00 07 68 61 73 4e 65 78 74 01 00 08 6e 65 78 74 or/AtomIterator...hasNext...next
08a0 41 74 6f 6d 01 00 19 28 29 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 41 74 6f 6d 3b Atom...()Ljoelib2/molecule/Atom;
08c0 01 00 15 67 65 74 44 65 70 65 6e 64 65 6e 63 79 54 72 65 65 48 61 73 68 01 00 15 28 4c 6a 61 76 ...getDependencyTreeHash...(Ljav
08e0 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 49 01 00 0b 67 65 74 49 6e 73 74 61 6e 63 65 01 00 a/lang/String;)I...getInstance..
0900 2f 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6f 72 67 2f 61 70 61 63 68 65 /(Ljava/lang/String;)Lorg/apache
0920 2f 6c 6f 67 34 6a 2f 43 61 74 65 67 6f 72 79 3b 00 21 00 17 00 28 00 00 00 05 00 1a 00 29 00 2a /log4j/Category;.!...(.......).*
0940 00 01 00 2b 00 00 00 02 00 18 00 1a 00 2c 00 2a 00 01 00 2b 00 00 00 02 00 19 00 1a 00 2d 00 2a ...+.........,.*...+.........-.*
0960 00 01 00 2b 00 00 00 02 00 1b 00 0a 00 2e 00 2f 00 00 00 1a 00 30 00 31 00 00 00 0b 00 01 00 32 ...+.........../.....0.1.......2
0980 00 33 00 01 00 34 00 00 00 4d 00 05 00 01 00 00 00 41 2a b7 00 01 b2 00 02 b6 00 03 99 00 22 b2 .3...4...M.......A*...........".
09a0 00 02 bb 00 04 59 b7 00 05 12 06 b6 00 07 2a b6 00 08 b6 00 09 b6 00 07 b6 00 0a b6 00 0b 2a 2a .....Y........*...............**
09c0 b6 00 08 12 0c 01 13 00 0d b6 00 09 b8 00 0e b5 00 0f b1 00 00 00 00 00 09 00 35 00 36 00 01 00 ..........................5.6...
09e0 34 00 00 00 11 00 01 00 01 00 00 00 05 2a b8 00 10 ac 00 00 00 00 00 09 00 37 00 38 00 01 00 34 4............*...........7.8...4
0a00 00 00 00 10 00 01 00 00 00 00 00 04 b2 00 11 b0 00 00 00 00 00 09 00 39 00 36 00 01 00 34 00 00 .......................9.6...4..
0a20 00 2f 00 03 00 03 00 00 00 1b 03 3c 2a b8 00 12 04 b8 00 13 3c a7 00 0e 4d b2 00 02 2c b6 00 15 ./.........<*.......<...M...,...
0a40 b6 00 16 1b ac 00 01 00 02 00 0b 00 0e 00 14 00 00 00 09 00 3a 00 3b 00 01 00 34 00 00 00 13 00 ....................:.;...4.....
0a60 01 00 00 00 00 00 07 13 00 17 b6 00 09 b0 00 00 00 00 00 09 00 3c 00 3b 00 01 00 34 00 00 00 0f .....................<.;...4....
0a80 00 01 00 00 00 00 00 03 12 18 b0 00 00 00 00 00 09 00 3d 00 3b 00 01 00 34 00 00 00 12 00 01 00 ..................=.;...4.......
0aa0 00 00 00 00 06 12 19 b8 00 1a b0 00 00 00 00 00 09 00 3e 00 3b 00 01 00 34 00 00 00 12 00 01 00 ..................>.;...4.......
0ac0 00 00 00 00 06 12 1b b8 00 1a b0 00 00 00 00 00 01 00 3f 00 40 00 01 00 34 00 00 00 4b 00 03 00 ..................?.@...4...K...
0ae0 06 00 00 00 3f 2b b9 00 1c 01 00 4e 12 1d 2b b9 00 1e 01 00 b8 00 1f c0 00 20 c0 00 20 3a 04 03 ....?+.....N..+..............:..
0b00 36 05 2d b9 00 21 01 00 99 00 19 2d b9 00 22 01 00 4d 19 04 15 05 84 05 01 2c b8 00 10 4f a7 ff 6.-..!.....-.."..M.......,...O..
0b20 e4 19 04 b0 00 00 00 00 00 01 00 41 00 42 00 01 00 34 00 00 00 13 00 01 00 01 00 00 00 07 b8 00 ...........A.B...4..............
0b40 12 b8 00 23 ac 00 00 00 00 00 08 00 43 00 33 00 01 00 34 00 00 00 2c 00 04 00 00 00 00 00 20 13 ...#........C.3...4...,.........
0b60 00 17 b6 00 09 b8 00 24 b3 00 02 05 bd 00 25 59 03 13 00 26 53 59 04 13 00 27 53 b3 00 11 b1 00 .......$......%Y...&SY...'S.....
0b80 00 00 00 00 00 .....