ofs | hex dump | ascii |
---|
0000 | ca fe ba be 00 00 00 31 00 a2 0a 00 36 00 48 07 00 49 0a 00 02 00 48 09 00 35 00 4a 0a 00 35 00 | .......1....6.H..I....H..5.J..5. |
0020 | 4b 09 00 35 00 4c 09 00 35 00 4d 08 00 4e 0a 00 4f 00 50 0b 00 0e 00 51 08 00 52 0a 00 4f 00 53 | K..5.L..5.M..N..O.P....Q..R..O.S |
0040 | 0b 00 0e 00 54 07 00 55 0b 00 56 00 57 0b 00 56 00 58 07 00 59 07 00 5a 0a 00 12 00 48 08 00 5b | ....T..U..V.W..V.X..Y..Z....H..[ |
0060 | 0a 00 12 00 5c 0b 00 0e 00 5d 0a 00 12 00 5e 0b 00 11 00 5f 0b 00 11 00 60 07 00 61 0b 00 0e 00 | ....\....]....^...._....`..a.... |
0080 | 62 0b 00 0e 00 63 0a 00 02 00 4b 0a 00 64 00 65 0a 00 35 00 66 07 00 67 0a 00 20 00 68 09 00 35 | b....c....K..d.e..5.f..g....h..5 |
00a0 | 00 69 0a 00 20 00 48 07 00 6a 08 00 6b 0a 00 6c 00 6d 0a 00 20 00 58 07 00 6e 0a 00 28 00 48 0b | .i....H..j..k..l.m....X..n..(.H. |
00c0 | 00 11 00 6f 08 00 70 0b 00 11 00 71 08 00 72 08 00 73 0b 00 56 00 74 0a 00 20 00 57 08 00 75 08 | ...o..p....q..r..s..V.t....W..u. |
00e0 | 00 76 08 00 77 0a 00 4f 00 78 07 00 79 07 00 7a 01 00 06 6c 6f 67 67 65 72 01 00 1b 4c 6f 72 67 | .v..w..O.x..y..z...logger...Lorg |
0100 | 2f 61 70 61 63 68 65 2f 6c 6f 67 34 6a 2f 43 61 74 65 67 6f 72 79 3b 01 00 10 63 6f 6e 74 69 67 | /apache/log4j/Category;...contig |
0120 | 46 72 61 67 6d 65 6e 74 65 72 01 00 34 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 66 | Fragmenter..4Ljoelib2/molecule/f |
0140 | 72 61 67 6d 65 6e 74 61 74 69 6f 6e 2f 43 6f 6e 74 69 67 75 6f 75 73 46 72 61 67 6d 65 6e 74 73 | ragmentation/ContiguousFragments |
0160 | 3b 01 00 0b 64 65 73 63 72 69 70 74 69 6f 6e 01 00 10 4c 6a 61 76 61 2f 75 74 69 6c 2f 4c 69 73 | ;...description...Ljava/util/Lis |
0180 | 74 3b 01 00 06 73 6d 61 72 74 73 01 00 06 3c 69 6e 69 74 3e 01 00 03 28 29 56 01 00 04 43 6f 64 | t;...smarts...<init>...()V...Cod |
01a0 | 65 01 00 10 67 65 74 46 72 61 67 6d 65 6e 74 61 74 69 6f 6e 01 00 3e 28 4c 6a 6f 65 6c 69 62 32 | e...getFragmentation..>(Ljoelib2 |
01c0 | 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 29 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c | /molecule/Molecule;)Ljoelib2/mol |
01e0 | 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 56 65 63 74 6f 72 3b 01 00 4f 28 4c 6a 6f 65 6c 69 62 | ecule/MoleculeVector;..O(Ljoelib |
0200 | 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 5a 4c 6a 61 76 61 2f 75 74 69 6c 2f | 2/molecule/Molecule;ZLjava/util/ |
0220 | 4c 69 73 74 3b 29 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 | List;)Ljoelib2/molecule/Molecule |
0240 | 56 65 63 74 6f 72 3b 01 00 0e 73 65 74 50 61 74 74 79 53 4d 41 52 54 53 01 00 15 28 4c 6a 61 76 | Vector;...setPattySMARTS...(Ljav |
0260 | 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 5a 01 00 13 28 4c 6a 61 76 61 2f 75 74 69 6c 2f 4c | a/lang/String;)Z...(Ljava/util/L |
0280 | 69 73 74 3b 29 5a 01 00 08 3c 63 6c 69 6e 69 74 3e 0c 00 3e 00 3f 01 00 32 6a 6f 65 6c 69 62 32 | ist;)Z...<clinit>..>.?..2joelib2 |
02a0 | 2f 6d 6f 6c 65 63 75 6c 65 2f 66 72 61 67 6d 65 6e 74 61 74 69 6f 6e 2f 43 6f 6e 74 69 67 75 6f | /molecule/fragmentation/Contiguo |
02c0 | 75 73 46 72 61 67 6d 65 6e 74 73 0c 00 39 00 3a 0c 00 41 00 43 0c 00 3d 00 3c 0c 00 37 00 38 01 | usFragments..9.:..A.C..=.<..7.8. |
02e0 | 00 1a 4e 6f 20 53 4d 41 52 54 53 20 70 61 74 74 65 72 6e 20 64 65 66 69 6e 65 64 2e 07 00 7b 0c | ..No.SMARTS.pattern.defined...{. |
0300 | 00 7c 00 7d 0c 00 7e 00 7f 01 00 38 4d 6f 6c 65 63 75 6c 65 20 6e 6f 74 20 64 65 66 69 6e 65 64 | .|.}..~....8Molecule.not.defined |
0320 | 20 6f 72 20 65 6d 70 74 79 2e 20 49 74 20 63 61 6e 20 6e 6f 74 20 62 65 20 66 72 61 67 6d 65 6e | .or.empty..It.can.not.be.fragmen |
0340 | 74 65 64 2e 0c 00 80 00 7d 0c 00 81 00 82 01 00 19 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c | ted.....}........joelib2/molecul |
0360 | 65 2f 4d 6f 6c 65 63 75 6c 65 07 00 83 0c 00 84 00 85 0c 00 86 00 87 01 00 23 6a 6f 65 6c 69 62 | e/Molecule...............#joelib |
0380 | 32 2f 73 6d 61 72 74 73 2f 53 4d 41 52 54 53 50 61 74 74 65 72 6e 4d 61 74 63 68 65 72 01 00 17 | 2/smarts/SMARTSPatternMatcher... |
03a0 | 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 42 75 69 6c 64 65 72 01 00 25 4e 6f 20 6d 6f 6c | java/lang/StringBuilder..%No.mol |
03c0 | 65 63 75 6c 61 72 20 73 74 72 75 63 74 75 72 65 20 61 76 61 69 6c 61 62 6c 65 20 66 6f 72 20 0c | ecular.structure.available.for.. |
03e0 | 00 88 00 89 0c 00 8a 00 8b 0c 00 8c 00 8b 0c 00 8d 00 8e 0c 00 8f 00 90 01 00 02 5b 49 0c 00 91 | ...........................[I... |
0400 | 00 92 0c 00 93 00 94 07 00 95 0c 00 96 00 97 0c 00 44 00 46 01 00 10 6a 61 76 61 2f 75 74 69 6c | .................D.F...java/util |
0420 | 2f 56 65 63 74 6f 72 0c 00 3e 00 98 0c 00 3b 00 3c 01 00 10 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 | /Vector..>....;.<...java/lang/St |
0440 | 72 69 6e 67 01 00 04 20 09 0d 0a 07 00 99 0c 00 9a 00 9b 01 00 28 6a 6f 65 6c 69 62 32 2f 73 6d | ring.................(joelib2/sm |
0460 | 61 72 74 73 2f 42 61 73 69 63 53 4d 41 52 54 53 50 61 74 74 65 72 6e 4d 61 74 63 68 65 72 0c 00 | arts/BasicSMARTSPatternMatcher.. |
0480 | 9c 00 45 01 00 18 49 6e 76 61 6c 69 64 20 53 4d 41 52 54 53 20 70 61 74 74 65 72 6e 3a 20 0c 00 | ..E...Invalid.SMARTS.pattern:... |
04a0 | 9d 00 85 01 00 0f 53 4d 41 52 54 53 20 70 61 74 74 65 72 6e 20 01 00 35 20 6d 75 73 74 20 68 61 | ......SMARTS.pattern...5.must.ha |
04c0 | 76 65 20 61 74 20 6c 65 61 73 74 20 74 77 6f 20 61 74 6f 6d 73 20 74 6f 20 61 6c 6c 6f 77 20 66 | ve.at.least.two.atoms.to.allow.f |
04e0 | 72 61 67 6d 65 6e 74 61 74 69 6f 6e 2e 0c 00 9e 00 9f 01 00 23 4e 6f 20 64 65 73 63 72 69 70 74 | ragmentation........#No.descript |
0500 | 69 6f 6e 20 66 6f 72 20 53 4d 41 52 54 53 20 70 61 74 74 65 72 6e 3a 20 01 00 00 01 00 32 6a 6f | ion.for.SMARTS.pattern:......2jo |
0520 | 65 6c 69 62 32 2e 6d 6f 6c 65 63 75 6c 65 2e 66 72 61 67 6d 65 6e 74 61 74 69 6f 6e 2e 53 4d 41 | elib2.molecule.fragmentation.SMA |
0540 | 52 54 53 46 72 61 67 6d 65 6e 74 61 74 69 6f 6e 0c 00 a0 00 a1 01 00 32 6a 6f 65 6c 69 62 32 2f | RTSFragmentation.......2joelib2/ |
0560 | 6d 6f 6c 65 63 75 6c 65 2f 66 72 61 67 6d 65 6e 74 61 74 69 6f 6e 2f 53 4d 41 52 54 53 46 72 61 | molecule/fragmentation/SMARTSFra |
0580 | 67 6d 65 6e 74 61 74 69 6f 6e 01 00 10 6a 61 76 61 2f 6c 61 6e 67 2f 4f 62 6a 65 63 74 01 00 19 | gmentation...java/lang/Object... |
05a0 | 6f 72 67 2f 61 70 61 63 68 65 2f 6c 6f 67 34 6a 2f 43 61 74 65 67 6f 72 79 01 00 05 65 72 72 6f | org/apache/log4j/Category...erro |
05c0 | 72 01 00 15 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 4f 62 6a 65 63 74 3b 29 56 01 00 07 69 73 45 6d | r...(Ljava/lang/Object;)V...isEm |
05e0 | 70 74 79 01 00 03 28 29 5a 01 00 04 77 61 72 6e 01 00 05 63 6c 6f 6e 65 01 00 14 28 29 4c 6a 61 | pty...()Z...warn...clone...()Lja |
0600 | 76 61 2f 6c 61 6e 67 2f 4f 62 6a 65 63 74 3b 01 00 0e 6a 61 76 61 2f 75 74 69 6c 2f 4c 69 73 74 | va/lang/Object;...java/util/List |
0620 | 01 00 04 73 69 7a 65 01 00 03 28 29 49 01 00 03 67 65 74 01 00 15 28 49 29 4c 6a 61 76 61 2f 6c | ...size...()I...get...(I)Ljava/l |
0640 | 61 6e 67 2f 4f 62 6a 65 63 74 3b 01 00 06 61 70 70 65 6e 64 01 00 2d 28 4c 6a 61 76 61 2f 6c 61 | ang/Object;...append..-(Ljava/la |
0660 | 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 42 75 69 6c | ng/String;)Ljava/lang/StringBuil |
0680 | 64 65 72 3b 01 00 08 67 65 74 54 69 74 6c 65 01 00 14 28 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 | der;...getTitle...()Ljava/lang/S |
06a0 | 74 72 69 6e 67 3b 01 00 08 74 6f 53 74 72 69 6e 67 01 00 05 6d 61 74 63 68 01 00 1e 28 4c 6a 6f | tring;...toString...match...(Ljo |
06c0 | 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 29 5a 01 00 0a 67 65 74 | elib2/molecule/Molecule;)Z...get |
06e0 | 4d 61 74 63 68 65 73 01 00 12 28 29 4c 6a 61 76 61 2f 75 74 69 6c 2f 4c 69 73 74 3b 01 00 07 67 | Matches...()Ljava/util/List;...g |
0700 | 65 74 42 6f 6e 64 01 00 1b 28 49 49 29 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 42 | etBond...(II)Ljoelib2/molecule/B |
0720 | 6f 6e 64 3b 01 00 0a 64 65 6c 65 74 65 42 6f 6e 64 01 00 1a 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f | ond;...deleteBond...(Ljoelib2/mo |
0740 | 6c 65 63 75 6c 65 2f 42 6f 6e 64 3b 29 5a 01 00 1f 77 73 69 2f 72 61 2f 74 6f 6f 6c 2f 42 61 73 | lecule/Bond;)Z...wsi/ra/tool/Bas |
0760 | 69 63 52 65 73 6f 75 72 63 65 4c 6f 61 64 65 72 01 00 09 72 65 61 64 4c 69 6e 65 73 01 00 24 28 | icResourceLoader...readLines..$( |
0780 | 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6a 61 76 61 2f 75 74 69 6c 2f 4c 69 | Ljava/lang/String;)Ljava/util/Li |
07a0 | 73 74 3b 01 00 04 28 49 29 56 01 00 1a 6a 6f 65 6c 69 62 32 2f 75 74 69 6c 2f 48 65 6c 70 65 72 | st;...(I)V...joelib2/util/Helper |
07c0 | 4d 65 74 68 6f 64 73 01 00 08 74 6f 6b 65 6e 69 7a 65 01 00 37 28 4c 6a 61 76 61 2f 75 74 69 6c | Methods...tokenize..7(Ljava/util |
07e0 | 2f 4c 69 73 74 3b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 4c 6a 61 76 61 2f 6c 61 | /List;Ljava/lang/String;Ljava/la |
0800 | 6e 67 2f 53 74 72 69 6e 67 3b 29 5a 01 00 04 69 6e 69 74 01 00 11 67 65 74 51 75 65 72 79 41 74 | ng/String;)Z...init...getQueryAt |
0820 | 6f 6d 73 53 69 7a 65 01 00 03 61 64 64 01 00 15 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 4f 62 6a 65 | omsSize...add...(Ljava/lang/Obje |
0840 | 63 74 3b 29 5a 01 00 0b 67 65 74 49 6e 73 74 61 6e 63 65 01 00 2f 28 4c 6a 61 76 61 2f 6c 61 6e | ct;)Z...getInstance../(Ljava/lan |
0860 | 67 2f 53 74 72 69 6e 67 3b 29 4c 6f 72 67 2f 61 70 61 63 68 65 2f 6c 6f 67 34 6a 2f 43 61 74 65 | g/String;)Lorg/apache/log4j/Cate |
0880 | 67 6f 72 79 3b 00 21 00 35 00 36 00 00 00 04 00 0a 00 37 00 38 00 00 00 02 00 39 00 3a 00 00 00 | gory;.!.5.6.......7.8.....9.:... |
08a0 | 02 00 3b 00 3c 00 00 00 02 00 3d 00 3c 00 00 00 06 00 01 00 3e 00 3f 00 01 00 40 00 00 00 1c 00 | ..;.<.....=.<.......>.?...@..... |
08c0 | 03 00 01 00 00 00 10 2a b7 00 01 2a bb 00 02 59 b7 00 03 b5 00 04 b1 00 00 00 00 00 01 00 41 00 | .......*...*...Y..............A. |
08e0 | 42 00 01 00 40 00 00 00 14 00 04 00 02 00 00 00 08 2a 2b 03 01 b6 00 05 b0 00 00 00 00 00 01 00 | B...@............*+............. |
0900 | 41 00 43 00 01 00 40 00 00 00 f3 00 05 00 0a 00 00 00 e7 2a b4 00 06 c7 00 0d b2 00 07 12 08 b6 | A.C...@............*............ |
0920 | 00 09 01 b0 2b c6 00 0c 2b b9 00 0a 01 00 99 00 0d b2 00 07 12 0b b6 00 0c 01 b0 2b b9 00 0d 01 | ....+...+..................+.... |
0940 | 00 c0 00 0e 3a 04 03 36 08 15 08 2a b4 00 06 b9 00 0f 01 00 a2 00 9a 2a b4 00 06 15 08 b9 00 10 | ....:..6...*...........*........ |
0960 | 02 00 c0 00 11 3a 05 19 04 c6 00 0d 19 04 b9 00 0a 01 00 99 00 25 b2 00 07 bb 00 12 59 b7 00 13 | .....:...............%......Y... |
0980 | 12 14 b6 00 15 19 04 b9 00 16 01 00 b6 00 15 b6 00 17 b6 00 09 a7 00 53 19 05 19 04 b9 00 18 02 | .......................S........ |
09a0 | 00 57 19 05 b9 00 19 01 00 3a 06 03 36 09 15 09 19 06 b9 00 0f 01 00 a2 00 31 19 06 15 09 b9 00 | .W.......:..6............1...... |
09c0 | 10 02 00 c0 00 1a c0 00 1a 3a 07 19 04 19 04 19 07 03 2e 19 07 04 2e b9 00 1b 03 00 b9 00 1c 02 | .........:...................... |
09e0 | 00 57 84 09 01 a7 ff c9 84 08 01 a7 ff 5e 2a b4 00 04 19 04 1c 2d b6 00 1d b0 00 00 00 00 00 01 | .W...........^*......-.......... |
0a00 | 00 44 00 45 00 01 00 40 00 00 00 17 00 02 00 03 00 00 00 0b 2b b8 00 1e 4d 2a 2c b6 00 1f ac 00 | .D.E...@............+...M*,..... |
0a20 | 00 00 00 00 01 00 44 00 46 00 01 00 40 00 00 01 20 00 04 00 08 00 00 01 14 04 3d 2a bb 00 20 59 | ......D.F...@.............=*...Y |
0a40 | 2b b9 00 0f 01 00 b7 00 21 b5 00 06 2a bb 00 20 59 2b b9 00 0f 01 00 b7 00 21 b5 00 22 bb 00 20 | +.......!...*...Y+.......!.."... |
0a60 | 59 b7 00 23 3a 05 03 36 06 15 06 2b b9 00 0f 01 00 a2 00 da 2b 15 06 b9 00 10 02 00 c0 00 24 4e | Y..#:..6...+........+.........$N |
0a80 | 19 05 2d 12 25 b8 00 26 57 19 05 03 b6 00 27 c0 00 24 3a 04 bb 00 28 59 b7 00 29 3a 07 19 07 19 | ..-.%..&W.....'..$:...(Y..):.... |
0aa0 | 04 b9 00 2a 02 00 9a 00 22 b2 00 07 bb 00 12 59 b7 00 13 12 2b b6 00 15 19 04 b6 00 15 b6 00 17 | ...*...."......Y....+........... |
0ac0 | b6 00 09 03 3d a7 00 80 19 07 b9 00 2c 01 00 05 a2 00 27 b2 00 07 bb 00 12 59 b7 00 13 12 2d b6 | ....=.......,.....'......Y....-. |
0ae0 | 00 15 19 04 b6 00 15 12 2e b6 00 15 b6 00 17 b6 00 09 03 3d a7 00 51 2a b4 00 06 19 07 b9 00 2f | ...................=..Q*......./ |
0b00 | 02 00 57 19 05 b6 00 30 05 a2 00 2c b2 00 07 bb 00 12 59 b7 00 13 12 31 b6 00 15 19 04 b6 00 15 | ..W....0...,......Y....1........ |
0b20 | b6 00 17 b6 00 0c 2a b4 00 22 12 32 b9 00 2f 02 00 57 a7 00 13 2a b4 00 22 19 05 04 b6 00 27 b9 | ......*..".2../..W...*..".....'. |
0b40 | 00 2f 02 00 57 84 06 01 a7 ff 21 1c ac 00 00 00 00 00 08 00 47 00 3f 00 01 00 40 00 00 00 15 00 | ./..W.....!.........G.?...@..... |
0b60 | 01 00 00 00 00 00 09 12 33 b8 00 34 b3 00 07 b1 00 00 00 00 00 00 | ........3..4.......... |