summaryrefslogtreecommitdiff
path: root/java/joelib2/molecule/types/BasicAtomPropertyColoring.class
blob: e8f421fc424a89ab17b88eb0d0d7d0c417fae05d (plain)
ofshex dumpascii
0000 ca fe ba be 00 00 00 31 00 a8 0a 00 33 00 50 09 00 31 00 51 0a 00 52 00 53 09 00 31 00 54 07 00 .......1....3.P..1.Q..R.S..1.T..
0020 55 0a 00 05 00 56 09 00 31 00 57 09 00 31 00 58 09 00 31 00 59 09 00 31 00 5a 0b 00 5b 00 5c 09 U....V..1.W..1.X..1.Y..1.Z..[.\.
0040 00 31 00 5d 07 00 5e 0a 00 0d 00 50 08 00 5f 0a 00 0d 00 60 0b 00 61 00 62 08 00 63 0a 00 0d 00 .1.]..^....P.._....`..a.b..c....
0060 64 0a 00 65 00 66 09 00 31 00 67 09 00 31 00 68 0b 00 5b 00 69 0b 00 2a 00 6a 0a 00 05 00 6b 04 d..e.f..1.g..1.h..[.i..*.j....k.
0080 43 7f 00 00 0a 00 05 00 6c 0a 00 05 00 6d 0b 00 5b 00 6e 0a 00 52 00 6f 0a 00 31 00 70 0a 00 71 C.......l....m..[.n..R.o..1.p..q
00a0 00 72 0a 00 71 00 73 07 00 74 0a 00 22 00 64 0a 00 65 00 75 08 00 76 08 00 77 08 00 78 0a 00 33 .r..q.s..t..".d..e.u..v..w..x..3
00c0 00 79 0a 00 7a 00 7b 07 00 7c 06 7f ef ff ff ff ff ff ff 06 ff ef ff ff ff ff ff ff 0b 00 61 00 .y..z.{..|....................a.
00e0 7d 08 00 7e 07 00 7f 0a 00 65 00 80 07 00 81 07 00 82 01 00 06 6c 6f 67 67 65 72 01 00 1b 4c 6f }..~.....e...........logger...Lo
0100 72 67 2f 61 70 61 63 68 65 2f 6c 6f 67 34 6a 2f 43 61 74 65 67 6f 72 79 3b 01 00 04 64 61 74 61 rg/apache/log4j/Category;...data
0120 01 00 27 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 74 79 70 65 73 2f 41 74 6f 6d 50 ..'Ljoelib2/molecule/types/AtomP
0140 72 6f 70 65 72 74 69 65 73 3b 01 00 04 65 74 61 62 01 00 21 4c 6a 6f 65 6c 69 62 32 2f 64 61 74 roperties;...etab..!Ljoelib2/dat
0160 61 2f 42 61 73 69 63 45 6c 65 6d 65 6e 74 48 6f 6c 64 65 72 3b 01 00 08 6d 61 78 43 6f 6c 6f 72 a/BasicElementHolder;...maxColor
0180 01 00 10 4c 6a 61 76 61 2f 61 77 74 2f 43 6f 6c 6f 72 3b 01 00 0c 6d 61 78 44 61 74 61 56 61 6c ...Ljava/awt/Color;...maxDataVal
01a0 75 65 01 00 01 44 01 00 08 6d 69 6e 43 6f 6c 6f 72 01 00 0c 6d 69 6e 44 61 74 61 56 61 6c 75 65 ue...D...minColor...minDataValue
01c0 01 00 0c 6d 6f 6c 34 63 6f 6c 6f 72 69 6e 67 01 00 1b 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 ...mol4coloring...Ljoelib2/molec
01e0 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 01 00 13 75 73 65 50 72 6f 70 65 72 74 79 43 6f 6c 6f 72 ule/Molecule;...usePropertyColor
0200 69 6e 67 01 00 01 5a 01 00 06 3c 69 6e 69 74 3e 01 00 03 28 29 56 01 00 04 43 6f 64 65 01 00 0c ing...Z...<init>...()V...Code...
0220 67 65 74 41 74 6f 6d 43 6f 6c 6f 72 01 00 29 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c getAtomColor..)(Ljoelib2/molecul
0240 65 2f 41 74 6f 6d 3b 29 4c 6a 61 76 61 2f 61 77 74 2f 43 6f 6c 6f 72 3b 01 00 16 67 65 74 4d 6f e/Atom;)Ljava/awt/Color;...getMo
0260 6c 65 63 75 6c 65 46 6f 72 43 6f 6c 6f 72 69 6e 67 01 00 1d 28 29 4c 6a 6f 65 6c 69 62 32 2f 6d leculeForColoring...()Ljoelib2/m
0280 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 01 00 17 75 73 65 41 74 6f 6d 50 72 6f 70 65 olecule/Molecule;...useAtomPrope
02a0 72 74 79 43 6f 6c 6f 72 69 6e 67 01 00 30 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 rtyColoring..0(Ljoelib2/molecule
02c0 2f 4d 6f 6c 65 63 75 6c 65 3b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 56 01 00 /Molecule;Ljava/lang/String;)V..
02e0 10 75 73 65 50 6c 61 69 6e 43 6f 6c 6f 72 69 6e 67 01 00 08 3c 63 6c 69 6e 69 74 3e 0c 00 45 00 .usePlainColoring...<clinit>..E.
0300 46 0c 00 37 00 38 07 00 83 0c 00 84 00 85 0c 00 39 00 3a 01 00 0e 6a 61 76 61 2f 61 77 74 2f 43 F..7.8..........9.:...java/awt/C
0320 6f 6c 6f 72 0c 00 45 00 86 0c 00 3b 00 3c 0c 00 3f 00 3c 0c 00 43 00 44 0c 00 41 00 42 07 00 87 olor..E....;.<..?.<..C.D..A.B...
0340 0c 00 88 00 4b 0c 00 35 00 36 01 00 17 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 42 75 69 ....K..5.6...java/lang/StringBui
0360 6c 64 65 72 01 00 0a 43 6f 6c 6f 72 69 6e 67 20 28 0c 00 89 00 8a 07 00 8b 0c 00 8c 00 8d 01 00 lder...Coloring.(...............
0380 2b 29 20 73 68 6f 75 6c 64 20 62 65 20 6e 65 77 6c 79 20 69 6e 69 74 69 61 6c 69 7a 65 64 20 66 +).should.be.newly.initialized.f
03a0 6f 72 20 6d 6f 6c 65 63 75 6c 65 20 0c 00 8e 00 8d 07 00 8f 0c 00 90 00 91 0c 00 3d 00 3e 0c 00 or.molecule................=.>..
03c0 40 00 3e 0c 00 92 00 93 0c 00 94 00 95 0c 00 96 00 93 0c 00 97 00 93 0c 00 98 00 93 0c 00 99 00 @.>.............................
03e0 93 0c 00 9a 00 9b 0c 00 4e 00 46 07 00 9c 0c 00 84 00 9d 0c 00 9e 00 9f 01 00 20 6a 6f 65 6c 69 ........N.F................joeli
0400 62 32 2f 66 65 61 74 75 72 65 2f 46 65 61 74 75 72 65 45 78 63 65 70 74 69 6f 6e 0c 00 a0 00 91 b2/feature/FeatureException.....
0420 01 00 18 55 73 65 20 70 6c 61 69 6e 20 61 74 6f 6d 20 63 6f 6c 6f 72 69 6e 67 2e 01 00 18 43 61 ...Use.plain.atom.coloring....Ca
0440 6e 27 74 20 67 65 74 20 61 74 6f 6d 20 70 72 6f 70 65 72 74 79 20 01 00 16 20 66 6f 72 20 61 74 n't.get.atom.property.....for.at
0460 6f 6d 20 63 6f 6c 6f 72 69 6e 67 20 69 6e 20 0c 00 a1 00 a2 07 00 a3 0c 00 a4 00 8d 01 00 25 6a om.coloring.in................%j
0480 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 74 79 70 65 73 2f 41 74 6f 6d 50 72 6f 70 65 72 oelib2/molecule/types/AtomProper
04a0 74 69 65 73 0c 00 a5 00 93 01 00 2b 44 61 74 61 20 66 6f 72 20 61 74 6f 6d 20 63 6f 6c 6f 72 69 ties.......+Data.for.atom.colori
04c0 6e 67 20 68 61 73 20 77 72 6f 6e 67 20 66 6f 72 6d 61 74 20 69 6e 20 01 00 30 6a 6f 65 6c 69 62 ng.has.wrong.format.in...0joelib
04e0 32 2f 6d 6f 6c 65 63 75 6c 65 2f 74 79 70 65 73 2f 42 61 73 69 63 41 74 6f 6d 50 72 6f 70 65 72 2/molecule/types/BasicAtomProper
0500 74 79 43 6f 6c 6f 72 69 6e 67 0c 00 a6 00 a7 01 00 10 6a 61 76 61 2f 6c 61 6e 67 2f 4f 62 6a 65 tyColoring........java/lang/Obje
0520 63 74 01 00 2b 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 74 79 70 65 73 2f 41 74 6f 6d ct..+joelib2/molecule/types/Atom
0540 50 72 6f 70 65 72 74 79 43 6f 6c 6f 72 69 6e 67 01 00 1f 6a 6f 65 6c 69 62 32 2f 64 61 74 61 2f PropertyColoring...joelib2/data/
0560 42 61 73 69 63 45 6c 65 6d 65 6e 74 48 6f 6c 64 65 72 01 00 08 69 6e 73 74 61 6e 63 65 01 00 23 BasicElementHolder...instance..#
0580 28 29 4c 6a 6f 65 6c 69 62 32 2f 64 61 74 61 2f 42 61 73 69 63 45 6c 65 6d 65 6e 74 48 6f 6c 64 ()Ljoelib2/data/BasicElementHold
05a0 65 72 3b 01 00 06 28 46 46 46 29 56 01 00 15 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f er;...(FFF)V...joelib2/molecule/
05c0 41 74 6f 6d 01 00 09 67 65 74 50 61 72 65 6e 74 01 00 06 61 70 70 65 6e 64 01 00 2d 28 4c 6a 61 Atom...getParent...append..-(Lja
05e0 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e va/lang/String;)Ljava/lang/Strin
0600 67 42 75 69 6c 64 65 72 3b 01 00 19 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c gBuilder;...joelib2/molecule/Mol
0620 65 63 75 6c 65 01 00 08 67 65 74 54 69 74 6c 65 01 00 14 28 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f ecule...getTitle...()Ljava/lang/
0640 53 74 72 69 6e 67 3b 01 00 08 74 6f 53 74 72 69 6e 67 01 00 19 6f 72 67 2f 61 70 61 63 68 65 2f String;...toString...org/apache/
0660 6c 6f 67 34 6a 2f 43 61 74 65 67 6f 72 79 01 00 04 77 61 72 6e 01 00 15 28 4c 6a 61 76 61 2f 6c log4j/Category...warn...(Ljava/l
0680 61 6e 67 2f 4f 62 6a 65 63 74 3b 29 56 01 00 08 67 65 74 49 6e 64 65 78 01 00 03 28 29 49 01 00 ang/Object;)V...getIndex...()I..
06a0 0e 67 65 74 44 6f 75 62 6c 65 56 61 6c 75 65 01 00 04 28 49 29 44 01 00 06 67 65 74 52 65 64 01 .getDoubleValue...(I)D...getRed.
06c0 00 08 67 65 74 47 72 65 65 6e 01 00 07 67 65 74 42 6c 75 65 01 00 0f 67 65 74 41 74 6f 6d 69 63 ..getGreen...getBlue...getAtomic
06e0 4e 75 6d 62 65 72 01 00 08 67 65 74 43 6f 6c 6f 72 01 00 13 28 49 29 4c 6a 61 76 61 2f 61 77 74 Number...getColor...(I)Ljava/awt
0700 2f 43 6f 6c 6f 72 3b 01 00 1d 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 46 65 61 74 75 72 /Color;...joelib2/feature/Featur
0720 65 48 65 6c 70 65 72 01 00 21 28 29 4c 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 46 65 61 eHelper..!()Ljoelib2/feature/Fea
0740 74 75 72 65 48 65 6c 70 65 72 3b 01 00 0b 66 65 61 74 75 72 65 46 72 6f 6d 01 00 4e 28 4c 6a 6f tureHelper;...featureFrom..N(Ljo
0760 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 4c 6a 61 76 61 2f 6c 61 elib2/molecule/Molecule;Ljava/la
0780 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 46 65 61 74 ng/String;)Ljoelib2/feature/Feat
07a0 75 72 65 52 65 73 75 6c 74 3b 01 00 05 65 72 72 6f 72 01 00 08 67 65 74 43 6c 61 73 73 01 00 13 ureResult;...error...getClass...
07c0 28 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 43 6c 61 73 73 3b 01 00 0f 6a 61 76 61 2f 6c 61 6e 67 2f ()Ljava/lang/Class;...java/lang/
07e0 43 6c 61 73 73 01 00 07 67 65 74 4e 61 6d 65 01 00 0c 67 65 74 41 74 6f 6d 73 53 69 7a 65 01 00 Class...getName...getAtomsSize..
0800 0b 67 65 74 49 6e 73 74 61 6e 63 65 01 00 2f 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e .getInstance../(Ljava/lang/Strin
0820 67 3b 29 4c 6f 72 67 2f 61 70 61 63 68 65 2f 6c 6f 67 34 6a 2f 43 61 74 65 67 6f 72 79 3b 00 21 g;)Lorg/apache/log4j/Category;.!
0840 00 31 00 33 00 01 00 34 00 09 00 0a 00 35 00 36 00 00 00 02 00 37 00 38 00 00 00 02 00 39 00 3a .1.3...4.....5.6.....7.8.....9.:
0860 00 00 00 02 00 3b 00 3c 00 00 00 02 00 3d 00 3e 00 00 00 02 00 3f 00 3c 00 00 00 02 00 40 00 3e .....;.<.....=.>.....?.<.....@.>
0880 00 00 00 02 00 41 00 42 00 00 00 02 00 43 00 44 00 00 00 06 00 01 00 45 00 46 00 01 00 47 00 00 .....A.B.....C.D.......E.F...G..
08a0 00 3e 00 06 00 01 00 00 00 32 2a b7 00 01 2a 01 b5 00 02 2a b8 00 03 b5 00 04 2a bb 00 05 59 0c .>.......2*...*....*......*...Y.
08c0 0b 0b b7 00 06 b5 00 07 2a bb 00 05 59 0b 0b 0c b7 00 06 b5 00 08 2a 03 b5 00 09 b1 00 00 00 00 ........*...Y.........*.........
08e0 00 01 00 48 00 49 00 01 00 47 00 00 01 05 00 05 00 08 00 00 00 f9 2b c7 00 05 01 b0 2a b4 00 0a ...H.I...G............+.....*...
0900 c6 00 44 2a b4 00 0a 2b b9 00 0b 01 00 a5 00 37 b2 00 0c bb 00 0d 59 b7 00 0e 12 0f b6 00 10 2a ..D*...+.......7......Y........*
0920 b4 00 0a b9 00 11 01 00 b6 00 10 12 12 b6 00 10 2b b9 00 0b 01 00 b9 00 11 01 00 b6 00 10 b6 00 ................+...............
0940 13 b6 00 14 2a b4 00 09 99 00 97 2a b4 00 15 2a b4 00 16 67 49 2a b4 00 02 2b b9 00 17 01 00 b9 ....*......*...*...gI*...+......
0960 00 18 02 00 2a b4 00 16 67 28 6f 90 38 04 2a b4 00 07 b6 00 19 2a b4 00 08 b6 00 19 64 86 17 04 ....*...g(o.8.*......*......d...
0980 6a 2a b4 00 08 b6 00 19 86 62 12 1a 6e 38 05 2a b4 00 07 b6 00 1b 2a b4 00 08 b6 00 1b 64 86 17 j*.......b..n8.*......*......d..
09a0 04 6a 2a b4 00 08 b6 00 1b 86 62 12 1a 6e 38 06 2a b4 00 07 b6 00 1c 2a b4 00 08 b6 00 1c 64 86 .j*.......b..n8.*......*......d.
09c0 17 04 6a 2a b4 00 08 b6 00 1c 86 62 12 1a 6e 38 07 bb 00 05 59 17 05 17 06 17 07 b7 00 06 b0 2b ..j*.......b..n8....Y..........+
09e0 b9 00 1d 01 00 3d 2a b4 00 04 1c b6 00 1e b0 00 00 00 00 00 01 00 4a 00 4b 00 01 00 47 00 00 00 .....=*...............J.K...G...
0a00 11 00 01 00 01 00 00 00 05 2a b4 00 0a b0 00 00 00 00 00 01 00 4c 00 4d 00 01 00 47 00 00 01 00 .........*...........L.M...G....
0a20 00 04 00 07 00 00 00 ec 2c c6 00 07 2b c7 00 08 2a b6 00 1f b1 2a 2b b5 00 0a 01 4e b8 00 20 2b ........,...+...*....*+....N...+
0a40 2c b6 00 21 4e a7 00 1d 3a 04 b2 00 0c 19 04 b6 00 23 b6 00 24 b2 00 0c 12 25 b6 00 24 2a 03 b5 ,..!N...:........#..$....%..$*..
0a60 00 09 2d c7 00 2b b2 00 0c bb 00 0d 59 b7 00 0e 12 26 b6 00 10 2c b6 00 10 12 27 b6 00 10 2a b6 ..-..+......Y....&...,....'...*.
0a80 00 28 b6 00 29 b6 00 10 b6 00 13 b6 00 24 2d c1 00 2a 99 00 62 2a 2d c0 00 2a b5 00 02 2a 14 00 .(..)........$-..*..b*-..*...*..
0aa0 2b b5 00 16 2a 14 00 2d b5 00 15 04 36 06 15 06 2b b9 00 2f 01 00 a3 00 36 2a b4 00 02 15 06 b9 +...*..-....6...+../....6*......
0ac0 00 18 02 00 39 04 18 04 2a b4 00 15 97 9e 00 09 2a 18 04 b5 00 15 18 04 2a b4 00 16 98 9c 00 09 ....9...*.......*.......*.......
0ae0 2a 18 04 b5 00 16 84 06 01 a7 ff c5 2a 04 b5 00 09 a7 00 22 b2 00 0c bb 00 0d 59 b7 00 0e 12 30 *...........*......"......Y....0
0b00 b6 00 10 2a b6 00 28 b6 00 29 b6 00 10 b6 00 13 b6 00 24 b1 00 01 00 14 00 1d 00 20 00 22 00 00 ...*..(..)........$.........."..
0b20 00 01 00 4e 00 46 00 01 00 47 00 00 00 12 00 02 00 01 00 00 00 06 2a 03 b5 00 09 b1 00 00 00 00 ...N.F...G............*.........
0b40 00 08 00 4f 00 46 00 01 00 47 00 00 00 19 00 01 00 00 00 00 00 0d 13 00 31 b6 00 29 b8 00 32 b3 ...O.F...G..............1..)..2.
0b60 00 0c b1 00 00 00 00 00 00 .........