blob: 05a87ec49fcb839421cae16f2e4417217953481c (plain)

ofs	hex dump	ascii
0000	ca fe ba be 00 00 00 31 01 40 0a 00 61 00 90 0a 00 61 00 91 0a 00 5b 00 92 07 00 93 0a 00 0c 00	.......1.@..a....a....[.........
0020	92 08 00 94 08 00 95 07 00 96 0a 00 04 00 97 09 00 0c 00 98 09 00 0c 00 99 07 00 9a 08 00 9b 08	................................
0040	00 9c 0a 00 9d 00 9e 08 00 9f 0a 00 a0 00 a1 0a 00 04 00 92 0a 00 a0 00 a2 0a 00 0c 00 a3 0b 00	................................
0060	a4 00 a5 09 00 0c 00 a6 07 00 a7 0a 00 17 00 90 08 00 a8 0a 00 17 00 a9 0b 00 a4 00 aa 08 00 ab	................................
0080	0a 00 17 00 ac 0a 00 ad 00 ae 0a 00 af 00 b0 0a 00 5c 00 92 0a 00 af 00 b1 0a 00 5d 00 92 07 00	.................\.........]....
00a0	b2 0a 00 23 00 b3 08 00 b4 08 00 b5 0b 00 a4 00 b6 08 00 b7 0a 00 23 00 b8 08 00 b9 08 00 ba 0a	...#..................#.........
00c0	00 5b 00 ac 0a 00 0c 00 bb 07 00 bc 0a 00 04 00 bd 0a 00 2e 00 b8 0a 00 9d 00 be 0a 00 bf 00 c0	.[..............................
00e0	08 00 c1 07 00 c2 0a 00 34 00 90 0a 00 5f 00 c3 0b 00 c4 00 c5 0b 00 a4 00 c6 0b 00 a4 00 c7 07	........4...._..................
0100	00 c8 0a 00 3a 00 90 0b 00 c4 00 c9 07 00 ca 0a 00 3a 00 cb 0a 00 3a 00 cc 0b 00 a4 00 cd 0b 00	....:............:....:.........
0120	ce 00 cf 0b 00 ce 00 d0 0b 00 50 00 d1 0a 00 3a 00 d2 0b 00 50 00 d3 0a 00 0c 00 d4 0a 00 ad 00	..........P....:....P...........
0140	d5 08 00 d6 0a 00 17 00 d7 0a 00 ad 00 d8 08 00 d9 0a 00 5e 00 da 0b 00 c4 00 db 07 00 dc 0a 00	...................^............
0160	4e 00 90 07 00 dd 0a 00 4e 00 de 0a 00 4e 00 df 0a 00 4e 00 e0 0a 00 4e 00 e1 0a 00 e2 00 cf 0a	N.......N....N....N....N........
0180	00 e2 00 e3 07 00 e4 0b 00 e5 00 e6 0a 00 57 00 e7 0a 00 08 00 e8 07 00 e9 07 00 ea 07 00 eb 07	..............W.................
01a0	00 ec 07 00 ed 0a 00 ad 00 ee 07 00 ef 07 00 f0 01 00 06 56 45 4e 44 4f 52 01 00 12 4c 6a 61 76	...................VENDOR...Ljav
01c0	61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 01 00 0d 43 6f 6e 73 74 61 6e 74 56 61 6c 75 65 01 00	a/lang/String;...ConstantValue..
01e0	0f 52 45 4c 45 41 53 45 5f 56 45 52 53 49 4f 4e 01 00 0c 52 45 4c 45 41 53 45 5f 44 41 54 45 01	.RELEASE_VERSION...RELEASE_DATE.
0200	00 0c 44 45 50 45 4e 44 45 4e 43 49 45 53 01 00 12 5b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 43 6c 61	..DEPENDENCIES...[Ljava/lang/Cla
0220	73 73 3b 01 00 06 6c 6f 67 67 65 72 01 00 1b 4c 6f 72 67 2f 61 70 61 63 68 65 2f 6c 6f 67 34 6a	ss;...logger...Lorg/apache/log4j
0240	2f 43 61 74 65 67 6f 72 79 3b 01 00 08 64 65 73 63 49 6e 66 6f 01 00 22 4c 6a 6f 65 6c 69 62 32	/Category;...descInfo.."Ljoelib2
0260	2f 66 65 61 74 75 72 65 2f 42 61 73 69 63 46 65 61 74 75 72 65 49 6e 66 6f 3b 01 00 06 3c 69 6e	/feature/BasicFeatureInfo;...<in
0280	69 74 3e 01 00 03 28 29 56 01 00 04 43 6f 64 65 01 00 0f 67 65 74 44 65 70 65 6e 64 65 6e 63 69	it>...()V...Code...getDependenci
02a0	65 73 01 00 14 28 29 5b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 43 6c 61 73 73 3b 01 00 07 67 65 74 4e	es...()[Ljava/lang/Class;...getN
02c0	61 6d 65 01 00 14 28 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 01 00 0e 67 65 74	ame...()Ljava/lang/String;...get
02e0	52 65 6c 65 61 73 65 44 61 74 65 01 00 11 67 65 74 52 65 6c 65 61 73 65 56 65 72 73 69 6f 6e 01	ReleaseDate...getReleaseVersion.
0300	00 09 67 65 74 56 65 6e 64 6f 72 01 00 12 61 63 63 65 70 74 65 64 50 72 6f 70 65 72 74 69 65 73	..getVendor...acceptedProperties
0320	01 00 1f 28 29 5b 4c 6a 6f 65 6c 69 62 32 2f 75 74 69 6c 2f 42 61 73 69 63 50 72 6f 70 65 72 74	...()[Ljoelib2/util/BasicPropert
0340	79 3b 01 00 09 63 61 6c 63 75 6c 61 74 65 01 00 3c 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63	y;...calculate..<(Ljoelib2/molec
0360	75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 29 4c 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 46	ule/Molecule;)Ljoelib2/feature/F
0380	65 61 74 75 72 65 52 65 73 75 6c 74 3b 01 00 0a 45 78 63 65 70 74 69 6f 6e 73 01 00 5b 28 4c 6a	eatureResult;...Exceptions..[(Lj
03a0	6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 4c 6a 6f 65 6c 69 62	oelib2/molecule/Molecule;Ljoelib
03c0	32 2f 66 65 61 74 75 72 65 2f 46 65 61 74 75 72 65 52 65 73 75 6c 74 3b 29 4c 6a 6f 65 6c 69 62	2/feature/FeatureResult;)Ljoelib
03e0	32 2f 66 65 61 74 75 72 65 2f 46 65 61 74 75 72 65 52 65 73 75 6c 74 3b 01 00 4b 28 4c 6a 6f 65	2/feature/FeatureResult;..K(Ljoe
0400	6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 4c 6a 61 76 61 2f 75 74 69	lib2/molecule/Molecule;Ljava/uti
0420	6c 2f 4d 61 70 3b 29 4c 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 46 65 61 74 75 72 65 52	l/Map;)Ljoelib2/feature/FeatureR
0440	65 73 75 6c 74 3b 01 00 6a 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65	esult;..j(Ljoelib2/molecule/Mole
0460	63 75 6c 65 3b 4c 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 46 65 61 74 75 72 65 52 65 73	cule;Ljoelib2/feature/FeatureRes
0480	75 6c 74 3b 4c 6a 61 76 61 2f 75 74 69 6c 2f 4d 61 70 3b 29 4c 6a 6f 65 6c 69 62 32 2f 66 65 61	ult;Ljava/util/Map;)Ljoelib2/fea
04a0	74 75 72 65 2f 46 65 61 74 75 72 65 52 65 73 75 6c 74 3b 01 00 05 63 6c 65 61 72 01 00 0b 67 65	ture/FeatureResult;...clear...ge
04c0	74 44 65 73 63 49 6e 66 6f 01 00 24 28 29 4c 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 42	tDescInfo..$()Ljoelib2/feature/B
04e0	61 73 69 63 46 65 61 74 75 72 65 49 6e 66 6f 3b 01 00 0e 67 65 74 44 65 73 63 72 69 70 74 69 6f	asicFeatureInfo;...getDescriptio
0500	6e 01 00 26 28 29 4c 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 46 65 61 74 75 72 65 44 65	n..&()Ljoelib2/feature/FeatureDe
0520	73 63 72 69 70 74 69 6f 6e 3b 01 00 1b 68 61 73 68 65 64 44 65 70 65 6e 64 65 6e 63 79 54 72 65	scription;...hashedDependencyTre
0540	65 56 65 72 73 69 6f 6e 01 00 03 28 29 49 01 00 0a 69 6e 69 74 69 61 6c 69 7a 65 01 00 12 28 4c	eVersion...()I...initialize...(L
0560	6a 61 76 61 2f 75 74 69 6c 2f 4d 61 70 3b 29 5a 01 00 0e 74 65 73 74 44 65 73 63 72 69 70 74 6f	java/util/Map;)Z...testDescripto
0580	72 01 00 03 28 29 5a 01 00 0a 66 72 65 72 65 6a 61 71 75 65 01 00 1e 28 4c 6a 6f 65 6c 69 62 32	r...()Z...frerejaque...(Ljoelib2
05a0	2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 29 49 01 00 08 66 69 6e 64 53 53 53 52	/molecule/Molecule;)I...findSSSR
05c0	01 00 32 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 4c	..2(Ljoelib2/molecule/Molecule;L
05e0	6a 6f 65 6c 69 62 32 2f 72 69 6e 67 2f 52 69 6e 67 73 3b 29 56 01 00 08 3c 63 6c 69 6e 69 74 3e	joelib2/ring/Rings;)V...<clinit>
0600	0c 00 6e 00 6f 0c 00 f1 00 f2 0c 00 73 00 74 01 00 20 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72	..n.o.......s.t...joelib2/featur
0620	65 2f 42 61 73 69 63 46 65 61 74 75 72 65 49 6e 66 6f 01 00 0e 6e 6f 5f 63 6f 6f 72 64 69 6e 61	e/BasicFeatureInfo...no_coordina
0640	74 65 73 01 00 1c 64 6f 63 73 2f 61 6c 67 6f 2f 42 72 65 61 64 74 68 46 69 72 73 74 53 65 61 72	tes...docs/algo/BreadthFirstSear
0660	63 68 01 00 12 6a 6f 65 6c 69 62 32 2f 72 69 6e 67 2f 52 69 6e 67 73 0c 00 6e 00 f3 0c 00 6c 00	ch...joelib2/ring/Rings..n....l.
0680	6d 0c 00 68 00 69 01 00 1b 6a 6f 65 6c 69 62 32 2f 72 69 6e 67 2f 52 69 6e 67 46 69 6e 64 65 72	m..h.i...joelib2/ring/RingFinder
06a0	53 53 53 52 01 00 14 68 74 74 70 3a 2f 2f 6a 6f 65 6c 69 62 2e 73 66 2e 6e 65 74 01 00 11 24 52	SSSR...http://joelib.sf.net...$R
06c0	65 76 69 73 69 6f 6e 3a 20 31 2e 31 30 20 24 07 00 f4 0c 00 f5 00 f6 01 00 1c 24 44 61 74 65 3a	evision:.1.10.$...........$Date:
06e0	20 32 30 30 36 2f 30 32 2f 32 32 20 30 32 3a 31 38 3a 32 32 20 24 07 00 f7 0c 00 f8 00 f9 0c 00	.2006/02/22.02:18:22.$..........
0700	fa 00 fb 0c 00 7a 00 7f 07 00 fc 0c 00 fd 00 8a 0c 00 6a 00 6b 01 00 17 6a 61 76 61 2f 6c 61 6e	.....z............j.k...java/lan
0720	67 2f 53 74 72 69 6e 67 42 75 69 6c 64 65 72 01 00 10 45 6d 70 74 79 20 6d 6f 6c 65 63 75 6c 65	g/StringBuilder...Empty.molecule
0740	20 27 0c 00 fe 00 ff 0c 01 00 00 74 01 00 02 27 2e 0c 01 01 00 74 07 01 02 0c 01 03 01 04 07 01	.'.........t...'.....t..........
0760	05 0c 00 f8 01 06 0c 01 07 01 08 01 00 20 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 46 65	..............joelib2/feature/Fe
0780	61 74 75 72 65 45 78 63 65 70 74 69 6f 6e 0c 01 09 00 74 01 00 4d 43 61 6e 20 6e 6f 74 20 63 61	atureException....t..MCan.not.ca
07a0	6c 63 75 6c 61 74 65 20 61 74 6f 6d 2d 69 6e 2d 72 69 6e 67 20 61 6e 64 20 62 6f 6e 64 2d 69 6e	lculate.atom-in-ring.and.bond-in
07c0	2d 72 69 6e 67 20 69 6e 66 6f 72 6d 61 74 69 6f 6e 73 20 66 6f 72 20 63 61 6c 63 75 6c 61 74 69	-ring.informations.for.calculati
07e0	6e 67 20 01 00 01 2e 0c 01 0a 01 0b 01 00 33 4d 69 73 73 69 6e 67 20 61 74 6f 6d 2d 69 6e 2d 72	ng............3Missing.atom-in-r
0800	69 6e 67 20 61 6e 64 20 62 6f 6e 64 2d 69 6e 2d 72 69 6e 67 20 69 6e 66 6f 72 6d 61 74 69 6f 6e	ing.and.bond-in-ring.information
0820	73 2e 0c 00 6e 01 0c 01 00 1a 20 72 65 73 75 6c 74 20 73 68 6f 75 6c 64 20 62 65 20 6f 66 20 74	s...n......result.should.be.of.t
0840	79 70 65 20 01 00 12 20 62 75 74 20 69 74 27 73 20 6f 66 20 74 79 70 65 20 0c 00 8d 00 8e 01 00	ype.....but.it's.of.type........
0860	27 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 42 61 73 69 63 46 65 61 74 75 72 65 44 65 73	'joelib2/feature/BasicFeatureDes
0880	63 72 69 70 74 69 6f 6e 0c 01 0d 00 74 0c 01 0e 01 0f 07 01 10 0c 01 11 01 12 01 00 34 45 6d 70	cription....t...............4Emp
08a0	74 79 20 70 72 6f 70 65 72 74 79 20 64 65 66 69 6e 69 74 69 6f 6e 20 6f 72 20 6d 69 73 73 69 6e	ty.property.definition.or.missin
08c0	67 20 70 72 6f 70 65 72 74 79 20 65 6e 74 72 79 2e 01 00 10 6a 61 76 61 2f 75 74 69 6c 2f 56 65	g.property.entry....java/util/Ve
08e0	63 74 6f 72 0c 01 13 01 14 07 01 15 0c 01 16 00 86 0c 01 17 00 86 0c 01 18 00 86 01 00 1b 6a 6f	ctor..........................jo
0900	65 6c 69 62 32 2f 75 74 69 6c 2f 42 61 73 69 63 42 69 74 56 65 63 74 6f 72 0c 01 19 01 1a 01 00	elib2/util/BasicBitVector.......
0920	02 5b 49 0c 00 80 00 6f 0c 01 1b 01 1c 0c 01 1d 01 1e 07 01 1f 0c 01 20 00 8a 0c 01 21 01 22 0c	.[I....o....................!.".
0940	01 23 00 86 0c 01 24 01 25 0c 01 26 00 86 0c 00 8b 00 8c 0c 01 27 00 8a 01 00 31 46 72 65 72 65	.#....$.%..&.........'....1Frere
0960	6a 61 71 75 65 20 6e 75 6d 62 65 72 20 6f 66 20 6d 75 6c 74 69 70 6c 65 20 73 70 61 6e 6e 69 6e	jaque.number.of.multiple.spannin
0980	67 20 67 72 61 70 68 73 20 69 73 20 0c 00 fe 01 28 0c 01 29 01 04 01 00 13 43 68 65 63 6b 20 63	g.graphs.is.....(..).....Check.c
09a0	6c 6f 73 75 72 65 20 62 6f 6e 64 73 0c 01 2a 01 2b 0c 01 2c 01 2d 01 00 18 6a 6f 65 6c 69 62 32	losure.bonds..*.+..,.-...joelib2
09c0	2f 72 69 6e 67 2f 52 69 6e 67 52 65 64 75 63 65 72 01 00 15 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65	/ring/RingReducer...joelib2/mole
09e0	63 75 6c 65 2f 42 6f 6e 64 0c 01 2e 01 2f 0c 01 30 00 6f 0c 01 31 01 32 0c 01 33 01 34 07 01 35	cule/Bond..../..0.o..1.2..3.4..5
0a00	0c 01 36 01 37 01 00 16 6a 6f 65 6c 69 62 32 2f 72 69 6e 67 2f 42 61 73 69 63 52 69 6e 67 07 01	..6.7...joelib2/ring/BasicRing..
0a20	38 0c 01 39 01 3a 0c 00 6e 01 3b 0c 01 3c 01 3d 01 00 0f 6a 61 76 61 2f 6c 61 6e 67 2f 43 6c 61	8..9.:..n.;..<.=...java/lang/Cla
0a40	73 73 01 00 2a 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 74 79 70 65 73 2f 61 74 6f 6d 6c	ss..*joelib2/feature/types/atoml
0a60	61 62 65 6c 2f 41 74 6f 6d 49 6e 52 69 6e 67 01 00 2a 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72	abel/AtomInRing..*joelib2/featur
0a80	65 2f 74 79 70 65 73 2f 62 6f 6e 64 6c 61 62 65 6c 2f 42 6f 6e 64 49 6e 52 69 6e 67 01 00 2d 6a	e/types/bondlabel/BondInRing..-j
0aa0	6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 74 79 70 65 73 2f 62 6f 6e 64 6c 61 62 65 6c 2f 42	oelib2/feature/types/bondlabel/B
0ac0	6f 6e 64 49 73 43 6c 6f 73 75 72 65 01 00 32 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f	ondIsClosure..2joelib2/molecule/
0ae0	66 72 61 67 6d 65 6e 74 61 74 69 6f 6e 2f 43 6f 6e 74 69 67 75 6f 75 73 46 72 61 67 6d 65 6e 74	fragmentation/ContiguousFragment
0b00	73 0c 01 3e 01 3f 01 00 10 6a 61 76 61 2f 6c 61 6e 67 2f 4f 62 6a 65 63 74 01 00 17 6a 6f 65 6c	s..>.?...java/lang/Object...joel
0b20	69 62 32 2f 66 65 61 74 75 72 65 2f 46 65 61 74 75 72 65 01 00 08 67 65 74 43 6c 61 73 73 01 00	ib2/feature/Feature...getClass..
0b40	13 28 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 43 6c 61 73 73 3b 01 00 6f 28 4c 6a 61 76 61 2f 6c 61	.()Ljava/lang/Class;..o(Ljava/la
0b60	6e 67 2f 53 74 72 69 6e 67 3b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 4c 6a 61 76	ng/String;Ljava/lang/String;Ljav
0b80	61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b	a/lang/String;Ljava/lang/String;
0ba0	4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72	Ljava/lang/String;Ljava/lang/Str
0bc0	69 6e 67 3b 29 56 01 00 23 6a 6f 65 6c 69 62 32 2f 64 61 74 61 2f 49 64 65 6e 74 69 66 69 65 72	ing;)V..#joelib2/data/Identifier
0be0	45 78 70 65 72 74 53 79 73 74 65 6d 01 00 0f 74 72 61 6e 73 66 6f 72 6d 43 56 53 74 61 67 01 00	ExpertSystem...transformCVStag..
0c00	26 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f	&(Ljava/lang/String;)Ljava/lang/
0c20	53 74 72 69 6e 67 3b 01 00 1d 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 52 65 73 75 6c 74	String;...joelib2/feature/Result
0c40	46 61 63 74 6f 72 79 01 00 08 69 6e 73 74 61 6e 63 65 01 00 21 28 29 4c 6a 6f 65 6c 69 62 32 2f	Factory...instance..!()Ljoelib2/
0c60	66 65 61 74 75 72 65 2f 52 65 73 75 6c 74 46 61 63 74 6f 72 79 3b 01 00 10 67 65 74 46 65 61 74	feature/ResultFactory;...getFeat
0c80	75 72 65 52 65 73 75 6c 74 01 00 33 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29	ureResult..3(Ljava/lang/String;)
0ca0	4c 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75 72 65 2f 46 65 61 74 75 72 65 52 65 73 75 6c 74 3b 01	Ljoelib2/feature/FeatureResult;.
0cc0	00 19 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 01 00 07 69 73	..joelib2/molecule/Molecule...is
0ce0	45 6d 70 74 79 01 00 06 61 70 70 65 6e 64 01 00 2d 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72	Empty...append..-(Ljava/lang/Str
0d00	69 6e 67 3b 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 42 75 69 6c 64 65 72 3b 01 00	ing;)Ljava/lang/StringBuilder;..
0d20	08 67 65 74 54 69 74 6c 65 01 00 08 74 6f 53 74 72 69 6e 67 01 00 19 6f 72 67 2f 61 70 61 63 68	.getTitle...toString...org/apach
0d40	65 2f 6c 6f 67 34 6a 2f 43 61 74 65 67 6f 72 79 01 00 05 65 72 72 6f 72 01 00 15 28 4c 6a 61 76	e/log4j/Category...error...(Ljav
0d60	61 2f 6c 61 6e 67 2f 4f 62 6a 65 63 74 3b 29 56 01 00 1d 6a 6f 65 6c 69 62 32 2f 66 65 61 74 75	a/lang/Object;)V...joelib2/featu
0d80	72 65 2f 46 65 61 74 75 72 65 48 65 6c 70 65 72 01 00 21 28 29 4c 6a 6f 65 6c 69 62 32 2f 66 65	re/FeatureHelper..!()Ljoelib2/fe
0da0	61 74 75 72 65 2f 46 65 61 74 75 72 65 48 65 6c 70 65 72 3b 01 00 0b 66 65 61 74 75 72 65 46 72	ature/FeatureHelper;...featureFr
0dc0	6f 6d 01 00 4e 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65	om..N(Ljoelib2/molecule/Molecule
0de0	3b 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 4c 6a 6f 65 6c 69 62 32 2f 66 65 61	;Ljava/lang/String;)Ljoelib2/fea
0e00	74 75 72 65 2f 46 65 61 74 75 72 65 52 65 73 75 6c 74 3b 01 00 0a 67 65 74 4d 65 73 73 61 67 65	ture/FeatureResult;...getMessage
0e20	01 00 07 68 61 73 44 61 74 61 01 00 15 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b	...hasData...(Ljava/lang/String;
0e40	29 5a 01 00 15 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 56 01 00 12 67 65 74	)Z...(Ljava/lang/String;)V...get
0e60	44 65 73 63 72 69 70 74 69 6f 6e 46 69 6c 65 01 00 15 67 65 74 44 65 70 65 6e 64 65 6e 63 79 54	DescriptionFile...getDependencyT
0e80	72 65 65 48 61 73 68 01 00 15 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 3b 29 49 01	reeHash...(Ljava/lang/String;)I.
0ea0	00 1b 6a 6f 65 6c 69 62 32 2f 75 74 69 6c 2f 50 72 6f 70 65 72 74 79 48 65 6c 70 65 72 01 00 0f	..joelib2/util/PropertyHelper...
0ec0	63 68 65 63 6b 50 72 6f 70 65 72 74 69 65 73 01 00 31 28 4c 6a 6f 65 6c 69 62 32 2f 75 74 69 6c	checkProperties..1(Ljoelib2/util
0ee0	2f 50 72 6f 70 65 72 74 79 41 63 63 65 70 74 6f 72 3b 4c 6a 61 76 61 2f 75 74 69 6c 2f 4d 61 70	/PropertyAcceptor;Ljava/util/Map
0f00	3b 29 5a 01 00 13 63 6f 6e 74 69 67 75 6f 75 73 46 72 61 67 6d 65 6e 74 73 01 00 2e 28 4c 6a 6f	;)Z...contiguousFragments...(Ljo
0f20	65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 4c 6a 61 76 61 2f 75 74	elib2/molecule/Molecule;Ljava/ut
0f40	69 6c 2f 4c 69 73 74 3b 29 56 01 00 0e 6a 61 76 61 2f 75 74 69 6c 2f 4c 69 73 74 01 00 04 73 69	il/List;)V...java/util/List...si
0f60	7a 65 01 00 0c 67 65 74 42 6f 6e 64 73 53 69 7a 65 01 00 0c 67 65 74 41 74 6f 6d 73 53 69 7a 65	ze...getBondsSize...getAtomsSize
0f80	01 00 03 67 65 74 01 00 15 28 49 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 4f 62 6a 65 63 74 3b 01 00	...get...(I)Ljava/lang/Object;..
0fa0	0c 66 72 6f 6d 49 6e 74 41 72 72 61 79 01 00 05 28 5b 49 29 56 01 00 0c 62 6f 6e 64 49 74 65 72	.fromIntArray...([I)V...bondIter
0fc0	61 74 6f 72 01 00 26 28 29 4c 6a 6f 65 6c 69 62 32 2f 75 74 69 6c 2f 69 74 65 72 61 74 6f 72 2f	ator..&()Ljoelib2/util/iterator/
0fe0	42 6f 6e 64 49 74 65 72 61 74 6f 72 3b 01 00 22 6a 6f 65 6c 69 62 32 2f 75 74 69 6c 2f 69 74 65	BondIterator;.."joelib2/util/ite
1000	72 61 74 6f 72 2f 42 6f 6e 64 49 74 65 72 61 74 6f 72 01 00 07 68 61 73 4e 65 78 74 01 00 08 6e	rator/BondIterator...hasNext...n
1020	65 78 74 42 6f 6e 64 01 00 19 28 29 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 42 6f	extBond...()Ljoelib2/molecule/Bo
1040	6e 64 3b 01 00 0d 67 65 74 42 65 67 69 6e 49 6e 64 65 78 01 00 07 62 69 74 49 73 4f 6e 01 00 04	nd;...getBeginIndex...bitIsOn...
1060	28 49 29 5a 01 00 0b 67 65 74 45 6e 64 49 6e 64 65 78 01 00 0e 69 73 44 65 62 75 67 45 6e 61 62	(I)Z...getEndIndex...isDebugEnab
1080	6c 65 64 01 00 1c 28 49 29 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74 72 69 6e 67 42 75 69 6c 64 65	led...(I)Ljava/lang/StringBuilde
10a0	72 3b 01 00 05 64 65 62 75 67 01 00 09 69 73 43 6c 6f 73 75 72 65 01 00 1a 28 4c 6a 6f 65 6c 69	r;...debug...isClosure...(Ljoeli
10c0	62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 42 6f 6e 64 3b 29 5a 01 00 03 61 64 64 01 00 15 28 4c 6a 61	b2/molecule/Bond;)Z...add...(Lja
10e0	76 61 2f 6c 61 6e 67 2f 4f 62 6a 65 63 74 3b 29 5a 01 00 12 61 64 64 52 69 6e 67 46 72 6f 6d 43	va/lang/Object;)Z...addRingFromC
1100	6c 6f 73 75 72 65 01 00 36 28 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65	losure..6(Ljoelib2/molecule/Mole
1120	63 75 6c 65 3b 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 42 6f 6e 64 3b 49 29 56 01	cule;Ljoelib2/molecule/Bond;I)V.
1140	00 09 73 6f 72 74 52 69 6e 67 73 01 00 0f 72 65 6d 6f 76 65 52 65 64 75 6e 64 61 6e 74 01 00 04	..sortRings...removeRedundant...
1160	28 49 29 56 01 00 0f 67 65 74 52 69 6e 67 49 74 65 72 61 74 6f 72 01 00 2b 28 29 4c 6a 6f 65 6c	(I)V...getRingIterator..+()Ljoel
1180	69 62 32 2f 75 74 69 6c 2f 69 74 65 72 61 74 6f 72 2f 42 61 73 69 63 52 69 6e 67 49 74 65 72 61	ib2/util/iterator/BasicRingItera
11a0	74 6f 72 3b 01 00 27 6a 6f 65 6c 69 62 32 2f 75 74 69 6c 2f 69 74 65 72 61 74 6f 72 2f 42 61 73	tor;..'joelib2/util/iterator/Bas
11c0	69 63 52 69 6e 67 49 74 65 72 61 74 6f 72 01 00 08 6e 65 78 74 52 69 6e 67 01 00 15 28 29 4c 6a	icRingIterator...nextRing...()Lj
11e0	6f 65 6c 69 62 32 2f 72 69 6e 67 2f 52 69 6e 67 3b 01 00 11 6a 6f 65 6c 69 62 32 2f 72 69 6e 67	oelib2/ring/Ring;...joelib2/ring
1200	2f 52 69 6e 67 01 00 0e 67 65 74 41 74 6f 6d 49 6e 64 69 63 65 73 01 00 04 28 29 5b 49 01 00 20	/Ring...getAtomIndices...()[I...
1220	28 5b 49 4c 6a 6f 65 6c 69 62 32 2f 6d 6f 6c 65 63 75 6c 65 2f 4d 6f 6c 65 63 75 6c 65 3b 29 56	([ILjoelib2/molecule/Molecule;)V
1240	01 00 08 73 65 74 52 69 6e 67 73 01 00 13 28 4c 6a 61 76 61 2f 75 74 69 6c 2f 4c 69 73 74 3b 29	...setRings...(Ljava/util/List;)
1260	56 01 00 0b 67 65 74 49 6e 73 74 61 6e 63 65 01 00 2f 28 4c 6a 61 76 61 2f 6c 61 6e 67 2f 53 74	V...getInstance../(Ljava/lang/St
1280	72 69 6e 67 3b 29 4c 6f 72 67 2f 61 70 61 63 68 65 2f 6c 6f 67 34 6a 2f 43 61 74 65 67 6f 72 79	ring;)Lorg/apache/log4j/Category
12a0	3b 00 21 00 0c 00 61 00 01 00 62 00 06 00 1a 00 63 00 64 00 01 00 65 00 00 00 02 00 0d 00 1a 00	;.!...a...b.....c.d...e.........
12c0	66 00 64 00 01 00 65 00 00 00 02 00 0e 00 1a 00 67 00 64 00 01 00 65 00 00 00 02 00 10 00 1a 00	f.d...e.........g.d...e.........
12e0	68 00 69 00 00 00 0a 00 6a 00 6b 00 00 00 02 00 6c 00 6d 00 00 00 14 00 01 00 6e 00 6f 00 01 00	h.i.....j.k.....l.m.......n.o...
1300	70 00 00 00 33 00 09 00 02 00 00 00 27 2a b7 00 01 2a b6 00 02 b6 00 03 4c 2a bb 00 04 59 b8 00	p...3.......'*...*......L*...Y..
1320	05 12 06 2b 12 07 01 13 00 08 b6 00 03 b7 00 09 b5 00 0a b1 00 00 00 00 00 09 00 71 00 72 00 01	...+.......................q.r..
1340	00 70 00 00 00 10 00 01 00 00 00 00 00 04 b2 00 0b b0 00 00 00 00 00 09 00 73 00 74 00 01 00 70	.p.......................s.t...p
1360	00 00 00 13 00 01 00 00 00 00 00 07 13 00 0c b6 00 03 b0 00 00 00 00 00 09 00 75 00 74 00 01 00	..........................u.t...
1380	70 00 00 00 0f 00 01 00 00 00 00 00 03 12 0d b0 00 00 00 00 00 09 00 76 00 74 00 01 00 70 00 00	p......................v.t...p..
13a0	00 12 00 01 00 00 00 00 00 06 12 0e b8 00 0f b0 00 00 00 00 00 09 00 77 00 74 00 01 00 70 00 00	.......................w.t...p..
13c0	00 12 00 01 00 00 00 00 00 06 12 10 b8 00 0f b0 00 00 00 00 00 01 00 78 00 79 00 01 00 70 00 00	.......................x.y...p..
13e0	00 0e 00 01 00 01 00 00 00 02 01 b0 00 00 00 00 00 01 00 7a 00 7b 00 02 00 70 00 00 00 22 00 04	...................z.{...p..."..
1400	00 03 00 00 00 16 b8 00 11 2a b4 00 0a b6 00 12 b6 00 13 4d 2a 2b 2c 01 b6 00 14 b0 00 00 00 00	.........*.........M*+,.........
1420	00 7c 00 00 00 04 00 01 00 23 00 01 00 7a 00 7d 00 02 00 70 00 00 00 14 00 04 00 03 00 00 00 08	.|.......#...z.}...p............
1440	2a 2b 2c 01 b6 00 14 b0 00 00 00 00 00 7c 00 00 00 04 00 01 00 23 00 01 00 7a 00 7e 00 02 00 70	*+,..........|.......#...z.~...p
1460	00 00 00 22 00 04 00 04 00 00 00 16 b8 00 11 2a b4 00 0a b6 00 12 b6 00 13 4e 2a 2b 2d 2c b6 00	..."...........*.........N*+-,..
1480	14 b0 00 00 00 00 00 7c 00 00 00 04 00 01 00 23 00 01 00 7a 00 7f 00 02 00 70 00 00 01 15 00 03	.......|.......#...z.....p......
14a0	00 07 00 00 01 01 01 3a 04 2b b9 00 15 01 00 99 00 29 b2 00 16 bb 00 17 59 b7 00 18 12 19 b6 00	.......:.+.......)......Y.......
14c0	1a 2b b9 00 1b 01 00 b6 00 1a 12 1c b6 00 1a b6 00 1d b6 00 1e a7 00 cf 04 36 05 b8 00 1f 2b b8	.+.......................6....+.
14e0	00 20 b6 00 21 57 b8 00 1f 2b b8 00 22 b6 00 21 57 a7 00 33 3a 06 b2 00 16 19 06 b6 00 24 b6 00	....!W...+.."..!W..3:........$..
1500	1e b2 00 16 bb 00 17 59 b7 00 18 12 25 b6 00 1a b8 00 05 b6 00 1a 12 26 b6 00 1a b6 00 1d b6 00	.......Y....%..........&........
1520	1e 03 36 05 15 05 99 00 7e 2b b8 00 22 b9 00 27 02 00 99 00 0f 2b b8 00 20 b9 00 27 02 00 9a 00	..6.....~+.."..'.....+.....'....
1540	0d bb 00 23 59 12 28 b7 00 29 bf 2c c1 00 08 9a 00 3d b2 00 16 bb 00 17 59 b7 00 18 2a b4 00 0a	...#Y.(..).,.....=......Y...*...
1560	b6 00 12 b6 00 1a 12 2a b6 00 1a 13 00 08 b6 00 03 b6 00 1a 12 2b b6 00 1a 2c b6 00 02 b6 00 2c	.......*.............+...,.....,
1580	b6 00 1a b6 00 1d b6 00 1e a7 00 1b 2c c0 00 08 3a 04 2b b8 00 05 b9 00 27 02 00 9a 00 09 2b 19	............,...:.+.....'.....+.
15a0	04 b8 00 2d 19 04 b0 00 01 00 35 00 4b 00 4e 00 23 00 00 00 7c 00 00 00 04 00 01 00 23 00 01 00	...-......5.K.N.#...|.......#...
15c0	80 00 6f 00 01 00 70 00 00 00 0d 00 00 00 01 00 00 00 01 b1 00 00 00 00 00 01 00 81 00 82 00 01	..o...p.........................
15e0	00 70 00 00 00 11 00 01 00 01 00 00 00 05 2a b4 00 0a b0 00 00 00 00 00 01 00 83 00 84 00 01 00	.p............*.................
1600	70 00 00 00 1b 00 03 00 01 00 00 00 0f bb 00 2e 59 2a b4 00 0a b6 00 2f b7 00 30 b0 00 00 00 00	p...............Y*...../..0.....
1620	00 01 00 85 00 86 00 01 00 70 00 00 00 13 00 01 00 01 00 00 00 07 b8 00 05 b8 00 31 ac 00 00 00	.........p.................1....
1640	00 00 01 00 87 00 88 00 01 00 70 00 00 00 20 00 02 00 02 00 00 00 14 2a 2b b8 00 32 9a 00 0d b2	..........p............*+..2....
1660	00 16 12 33 b6 00 1e 03 ac 04 ac 00 00 00 00 00 01 00 89 00 8a 00 01 00 70 00 00 00 0e 00 01 00	...3....................p.......
1680	01 00 00 00 02 04 ac 00 00 00 00 00 0c 00 8b 00 8c 00 01 00 70 00 00 00 cc 00 03 00 0a 00 00 00	....................p...........
16a0	c0 03 3c bb 00 34 59 b7 00 35 4d 2a 2c b8 00 36 2c b9 00 37 01 00 99 00 a9 2c b9 00 37 01 00 04	..<..4Y..5M*,..6,..7.....,..7...
16c0	a0 00 16 2a b9 00 38 01 00 2a b9 00 39 01 00 64 04 60 3c a7 00 8c 01 4e bb 00 3a 59 b7 00 3b 3a	...*..8..*..9..d.`<....N..:Y..;:
16e0	06 03 36 08 15 08 2c b9 00 37 01 00 a2 00 73 2c 15 08 b9 00 3c 02 00 c0 00 3d c0 00 3d 3a 07 19	..6...,..7....s,....<....=..=:..
1700	06 b6 00 3e 19 06 19 07 b6 00 3f 19 07 be 36 04 03 36 05 2a b9 00 40 01 00 3a 09 19 09 b9 00 41	...>......?...6..6.*..@..:.....A
1720	01 00 99 00 2d 19 09 b9 00 42 01 00 4e 19 06 2d b9 00 43 01 00 b6 00 44 99 ff e3 19 06 2d b9 00	....-....B..N..-..C....D.....-..
1740	45 01 00 b6 00 44 99 ff d5 84 05 01 a7 ff cf 1b 15 05 15 04 64 04 60 60 3c 84 08 01 a7 ff 88 1b	E....D..............d.``<.......
1760	ac 00 00 00 00 00 2a 00 8d 00 8e 00 01 00 70 00 00 01 09 00 04 00 0b 00 00 00 fd 2a b8 00 46 3e	......*.......p............*..F>
1780	b2 00 16 b6 00 47 99 00 1c b2 00 16 bb 00 17 59 b7 00 18 12 48 b6 00 1a 1d b6 00 49 b6 00 1d b6	.....G.........Y....H......I....
17a0	00 4a 1d 99 00 d4 bb 00 34 59 b7 00 35 3a 04 bb 00 34 59 b7 00 35 3a 05 2a b9 00 40 01 00 3a 07	.J......4Y..5:...4Y..5:.*..@..:.
17c0	b2 00 16 b6 00 47 99 00 0b b2 00 16 12 4b b6 00 4a 19 07 b9 00 41 01 00 99 00 21 19 07 b9 00 42	.....G.......K..J....A....!....B
17e0	01 00 3a 06 19 06 b8 00 4c 99 ff e8 19 05 19 06 b9 00 4d 02 00 57 a7 ff db 19 05 b9 00 37 01 00	..:.....L.........M..W.......7..
1800	99 00 71 bb 00 4e 59 b7 00 4f 3a 08 03 36 09 15 09 19 05 b9 00 37 01 00 a2 00 1c 19 08 2a 19 05	..q..NY..O:..6.......7.......*..
1820	15 09 b9 00 3c 02 00 c0 00 50 03 b6 00 51 84 09 01 a7 ff de 19 08 b6 00 52 19 08 1d b6 00 53 19	....<....P...Q..........R.....S.
1840	08 b6 00 54 3a 09 19 09 b6 00 55 99 00 26 19 09 b6 00 56 3a 0a bb 00 57 59 19 0a b9 00 58 01 00	...T:.....U..&....V:...WY....X..
1860	2a b7 00 59 4d 19 04 2c b9 00 4d 02 00 57 a7 ff d8 2b 19 04 b6 00 5a b1 00 00 00 00 00 08 00 8f	*..YM..,..M..W...+....Z.........
1880	00 6f 00 01 00 70 00 00 00 38 00 04 00 00 00 00 00 2c 07 bd 00 5b 59 03 13 00 5c 53 59 04 13 00	.o...p...8.......,...[Y...\SY...
18a0	5d 53 59 05 13 00 5e 53 59 06 13 00 5f 53 b3 00 0b 13 00 0c b6 00 03 b8 00 60 b3 00 16 b1 00 00	]SY...^SY..._S...........`......
18c0	00 00 00 00	....