diff options
| author | Christoph Helma <helma@in-silico.ch> | 2011-02-22 15:24:15 +0100 |
|---|---|---|
| committer | Christoph Helma <helma@in-silico.ch> | 2011-02-22 15:24:15 +0100 |
| commit | d3cea0a0d792b76464b0760c879d61e91725c675 (patch) | |
| tree | 06775b954c1eda1f9612da88f01b786a8c74ce65 | |
| parent | 3ab2f8d8d61e2239d05c9a129f2c8df2efbcee0e (diff) | |
validation istallation fixed
| -rw-r--r-- | debian.sh | 1 | ||||
| -rw-r--r-- | opentox-webservices.sh | 11 |
2 files changed, 10 insertions, 2 deletions
@@ -15,6 +15,7 @@ apt-get install wget hostname pwgen git-core raptor-utils r-base -y echo mysql-server-5.1 mysql-server/root_password password $mysql_root | debconf-set-selections echo mysql-server-5.1 mysql-server/root_password_again password $mysql_root | debconf-set-selections apt-get install mysql-server -y +apt-get install xsltproc gnuplot -y apt-get install libssl-dev zlib1g-dev libreadline-dev libmysqlclient-dev libmysqlclient-dev libcurl4-openssl-dev libxml2-dev libxslt1-dev libgsl0-dev -y sed -i '/^JAVA_HOME=/d' /etc/profile echo 'export JAVA_HOME=/usr/lib/jvm/java-6-sun' | tee -a /etc/profile diff --git a/opentox-webservices.sh b/opentox-webservices.sh index f692358..d67c706 100644 --- a/opentox-webservices.sh +++ b/opentox-webservices.sh @@ -20,9 +20,16 @@ for s in compound dataset algorithm model toxcreate task; do ln -s /var/www/opentox/$s/public /var/www/$s cd - done + +# validation service git clone http://github.com/mguetlein/opentox-validation.git validation -cd validation -git checkout -t origin/$branch +cd /var/www/opentox/validation +git checkout -t origin/test +gem install ruby-plot +mkdir -p public +ln -s /var/www/opentox/validation/public /var/www/validation + +# fminer etc cd /var/www/opentox/algorithm updatedb rake fminer:install |