diff options
author | Andreas Maunz <andreas@maunz.de> | 2011-05-03 14:22:26 +0200 |
---|---|---|
committer | Andreas Maunz <andreas@maunz.de> | 2011-05-03 14:22:26 +0200 |
commit | 12295ec16b611720b15b57a64a35b81ce28e6eec (patch) | |
tree | 947a2959c83aac8d52b68e0b360b70fdfbca2d3a | |
parent | 456c8cc1448a7f4d83bf5790236d79ebbe9525d9 (diff) | |
parent | 5c4240c295466fe56dea73b26710a9798c8570e6 (diff) |
Merge branch 'development' of github.com:opentox/install into development
-rwxr-xr-x | base-install.sh | 2 | ||||
-rwxr-xr-x | opentox-ruby.sh | 4 | ||||
-rwxr-xr-x | opentox-webservices.sh | 2 |
3 files changed, 4 insertions, 4 deletions
diff --git a/base-install.sh b/base-install.sh index 4f554fc..fbf0689 100755 --- a/base-install.sh +++ b/base-install.sh @@ -27,7 +27,7 @@ fi touch $OT_UI_CONF # Pkgs -packs="binutils build-essential git-core hostname libcurl4-openssl-dev libgsl0-dev libreadline5-dev libreadline-dev libssl-dev libxml2-dev libxslt1-dev lsb-release pwgen raptor-utils r-base r-base-core r-base-dev sun-java6-jdk wget zlib1g-dev" +packs="binutils build-essential git-core gnuplot hostname libcurl4-openssl-dev libgsl0-dev libreadline5-dev libreadline-dev libsqlite3-dev libssl-dev libxml2-dev libxslt1-dev lsb-release pwgen raptor-utils r-base r-base-core r-base-dev sqlite3 sun-java6-jdk wget xsltproc zlib1g-dev" echo echo "Base Packages:" diff --git a/opentox-ruby.sh b/opentox-ruby.sh index 607cf18..d101600 100755 --- a/opentox-ruby.sh +++ b/opentox-ruby.sh @@ -8,7 +8,7 @@ DIR="`pwd`" if [ "$(id -u)" = "0" ]; then - echo "This script must be run as non-root." 1>&2 + echo "This script must be run as non-root." 1>&264 exit 1 fi @@ -61,7 +61,7 @@ fi if [ "$OT_INSTALL" = "server" ]; then aa="https:\/\/opensso.in-silico.ch" else - aa=nil + aa="" fi mkdir -p "$HOME/.opentox/config" >>$LOG 2>&1 diff --git a/opentox-webservices.sh b/opentox-webservices.sh index 7e904ad..23af311 100755 --- a/opentox-webservices.sh +++ b/opentox-webservices.sh @@ -42,7 +42,7 @@ echo "Webservices ('$LOG'):" mkdir -p "$WWW_DEST/opentox" >>$LOG 2>&1 cd "$WWW_DEST/opentox" >>$LOG 2>&1 -for s in compound dataset algorithm model toxcreate task; do +for s in compound dataset algorithm model toxcreate task validation; do rm -rf "$s" >>$LOG 2>&1 $GIT clone "git://github.com/opentox/$s.git" "$s" >>$LOG 2>&1 cd "$s" >>$LOG 2>&1 |