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Diffstat (limited to 'environment_update.sh')
-rwxr-xr-x | environment_update.sh | 77 |
1 files changed, 0 insertions, 77 deletions
diff --git a/environment_update.sh b/environment_update.sh deleted file mode 100755 index d0beae4..0000000 --- a/environment_update.sh +++ /dev/null @@ -1,77 +0,0 @@ -#!/bin/sh -# Update script for OpenTox-ruby and webservices -# Authors: Andreas Maunz, David Vorgrimmler -# This script updates a productiv version of IST Opentox Services. All data will be saved and recovered. -# Make sure your web services are down befor running this script. -# You may modify some variables e.g. HOME, OTPREFIX, BACKUP_DIR. -# opentox/install is needed and has to be configured - -HOME="/home/opentox" -. $HOME/.opentox-ui.sh - -OTPREFIX="$HOME/opentox" -BACKUP_DIR="$OTPREFIX/ot-server-backup" -mkdir $BACKUP_DIR >/dev/null 2>&1 -mkdir -p $BACKUP_DIR/tmp/dataset/public >/dev/null 2>&1 -mkdir -p $BACKUP_DIR/tmp/model/public >/dev/null 2>&1 -mkdir -p $BACKUP_DIR/tmp/validation >/dev/null 2>&1 -#mkdir -p $BACKUP_DIR/tmp/log >/dev/null 2>&1 - - -echo "Creating backup of www..." -TAR_NAME=$BACKUP_DIR/"www_`date +%y%m%d`.tar.gz" - -if [ -e $TAR_NAME ] || tar czvf $TAR_NAME "$OTPREFIX/opentox-ruby/www"; then - echo - echo "Will delete www in 10s! Press Ctrl+C to abort..." - sleep 10 - sudo rm -rf "$OTPREFIX/opentox-ruby/www" -fi - - -NGINX="`which nginx`" -RAKE="`which rake`" - -if ! [ -e "$RAKE" ]; then - echo "Rake not found." - exit 1 -fi -if ! [ -e "$NGINX" ]; then - echo "Nginx not found." - exit 1 -fi -if ! cd "$OTPREFIX/install"; then - echo "$OTPREFIX/install dir not found" -fi - - -OTINSTALL="$OTPREFIX/install/opentox-webservices.sh" -if ! [ -e "$OTINSTALL" ]; then - echo "$OTINSTALL not found." - exit 1 -fi -chmod +x $OTINSTALL -`$OTINSTALL` -echo "$OTINSTALL script end." - - -OTRUBYINSTALL="$OTPREFIX/install/opentox-ruby.sh" -if ! [ -e "$OTRUBYINSTALL" ]; then - echo "$OTRUBYINSTALL not found." - exit 1 -fi -chmod +x $OTRUBYINSTALL -`$OTRUBYINSTALL` -echo "$OTRUBYINSTALL script end." - - -echo "Extracting backup of www..." -cd / -DEST_DATASET=`echo "$OTPREFIX/opentox-ruby/www/opentox/dataset/public/*yaml" | sed 's/.\(.*\)/\1/'` -DEST_MODEL=`echo "$OTPREFIX/opentox-ruby/www/opentox/model/public/*yaml" | sed 's/.\(.*\)/\1/'` -DEST_REPORTS=`echo "$OTPREFIX/opentox-ruby/www/opentox/validation/reports" | sed 's/.\(.*\)/\1/'` -tar xzvf $TAR_NAME --wildcards $DEST_DATASET -tar xzvf $TAR_NAME --wildcards $DEST_MODEL -tar xzvf $TAR_NAME $DEST_REPORTS -cd - -echo "End of script." |