diff options
Diffstat (limited to 'install')
| -rwxr-xr-x | install | 4 |
1 files changed, 0 insertions, 4 deletions
@@ -39,9 +39,6 @@ echo [ -f $OT_PREFIX/install/utils.sh ] || (cmd="mkdir -p $OT_PREFIX/install && cp utils.sh $OT_PREFIX/install" && run_cmd "$cmd" "Install utils.sh to OT_PREFIX") [ -f $HOME/.opentox/config/install/config.sh ] || (cmd="mkdir -p $HOME/.opentox/config/install && cp config.sh $HOME/.opentox/config/install" && run_cmd "$cmd" "Install config.sh to CONFIG (~/.opentox/config)") [ -f $OT_DEFAULT_CONF ] || (cmd="echo '\$aa = { :uri => nil }' > $OT_DEFAULT_CONF" && run_cmd "$cmd" "Install default.rb to CONFIG (~/.opentox/conf)") -# Added external compound service uri (only till it is available for the new architecture). -if ! cat "$OT_DEFAULT_CONF" | grep "compound" | grep ":uri=">/dev/null 2>&1; then echo '$compound = { :uri => "http://webservices.in-silico.ch/compound" }' >> $OT_DEFAULT_CONF; fi - . ./base-install # Debian specific; disable this for others. ./raptor2-install # Download, compile and build raptor2. Install to OT_PREFIX. @@ -61,6 +58,5 @@ fi [ -f $HOME/.opentox/config/ambit_descriptors.yaml ] || (cmd="cp ambit_descriptors.yaml $HOME/.opentox/config/" && run_cmd "$cmd" "Ambit keys file") [ -f $HOME/.opentox/config/jl_keys.yaml ] || (cmd="cp jl_keys.yaml $HOME/.opentox/config/" && run_cmd "$cmd" "Joelib keys file") [ -f $OT_TOOLS_CONF ] || (cmd="cp ot-tools-user.sh $OT_TOOLS_CONF" && run_cmd "$cmd" "Created ot-tools (stored in ~/.opentox)") -if ! cat "$OT_TOOLS_CONF" | grep "OT_PREFIX=">/dev/null 2>&1; then echo "OT_PREFIX=$OT_PREFIX" >> $OT_TOOLS_CONF; fi notify |