1 files changed, 0 insertions, 88 deletions
diff --git a/opentox-webservices.sh b/opentox-webservices.sh
deleted file mode 100755
index 88f864c..0000000
--- a/opentox-webservices.sh
+++ /dev/null
@@ -1,88 +0,0 @@
-#!/bin/sh
-#
-# Installs Opentox Webservices.
-# Author: Christoph Helma, Andreas Maunz.
-#
-
-. "`pwd`/utils.sh"
-DIR=`pwd`
-
-if [ "$(id -u)" = "0" ]; then
-  echo "This script must be run as non-root." 1>&2
-  exit 1
-fi
-
-# Utils
-WGET="`which wget`"
-if [ ! -e "$WGET" ]; then
-  echo "'wget' missing. Install 'wget' first. Aborting..."
-  exit 1
-fi
-
-RAKE="`which rake`"
-if [ ! -e "$RAKE" ]; then
-  echo "'rake' missing. Install 'rake' first. Aborting..."
-  exit 1
-fi
-
-GIT="`which git`"
-if [ ! -e "$GIT" ]; then
-  echo "'git' missing. Install 'git' first. Aborting..."
-  exit 1
-fi
-
-RUBY="`which ruby`"
-if [ ! -e "$RUBY" ]; then
-  echo "'ruby' missing. Install 'ruby' first. Aborting..."
-  exit 1
-fi
-
-LOG="$HOME/tmp/`basename $0`-log.txt"
-
-echo
-echo "Webservices ('$LOG'):"
-
-mkdir -p "$WWW_DEST/opentox" >>$LOG 2>&1
-cd "$WWW_DEST/opentox" >>$LOG 2>&1
-for s in compound dataset algorithm model toxcreate task validation; do
-    rm -rf "$s" >>$LOG 2>&1
-    $GIT clone "git://github.com/opentox/$s.git" "$s" >>$LOG 2>&1
-    cd "$s" >>$LOG 2>&1
-    $GIT checkout -b $OT_BRANCH origin/$OT_BRANCH >>$LOG 2>&1
-    #rm -rf public >>$LOG 2>&1
-    #mkdir public >>$LOG 2>&1
-    mypath_from="$WWW_DEST/opentox/$s/public"
-    mypath_to="$WWW_DEST/$s"
-    cmd="ln -sf \"$mypath_from\" \"$mypath_to\"" && run_cmd "$cmd" "Linking $s"
-    cd - >>$LOG 2>&1
-done
-
-# fminer etc
-cmd="test -f $HOME/.opentox/config/production.yaml" && run_cmd "$cmd" "Config present"
-cd "$WWW_DEST/opentox/algorithm" >>$LOG 2>&1
-cmd="$GIT submodule init" && run_cmd "$cmd" "Fminer Init"
-cmd="$GIT submodule update" && run_cmd "$cmd" "Fminer Update"
-cd "libfminer/libbbrc">>$LOG 2>&1
-$GIT checkout $OT_BRANCH>>$LOG 2>&1
-$GIT pull >>$LOG 2>&1
-cd - >>$LOG 2>&1
-cd "libfminer/liblast">>$LOG 2>&1
-$GIT checkout $OT_BRANCH>>$LOG 2>&1
-$GIT pull >>$LOG 2>&1
-cd - >>$LOG 2>&1
-for mylib in bbrc last; do
-  cmd="sed -i 's,^INCLUDE_OB.*,INCLUDE_OB\ =\ -I$OB_DEST/include/openbabel-2.0,g' $WWW_DEST/opentox/algorithm/libfminer/lib$mylib/Makefile; sed -i 's,^LDFLAGS_OB.*,LDFLAGS_OB\ =\ -L$OB_DEST/lib,g' $WWW_DEST/opentox/algorithm/libfminer/lib$mylib/Makefile" && run_cmd "$cmd" "Makefile $mylib (OB)"
-  cmd="sed -i 's,^INCLUDE_RB.*,INCLUDE_RB\ =\ -I$RUBY_DEST/lib/ruby/1.8/`uname -m`-linux,g' $WWW_DEST/opentox/algorithm/libfminer/lib$mylib/Makefile" && run_cmd "$cmd" "Makefile $mylib (RB)"
-done
-cd "libfminer/libbbrc">>$LOG 2>&1
-cmd="make ruby" && run_cmd "$cmd" "Make BBRC"
-cd - >>$LOG 2>&1
-cd "libfminer/liblast">>$LOG 2>&1
-cmd="make ruby" && run_cmd "$cmd" "Make LAST"
-cd - >>$LOG 2>&1
-cd "last-utils">>$LOG 2>&1
-$GIT checkout $OT_BRANCH>>$LOG 2>&1
-$GIT pull >>$LOG 2>&1
-
-cd "$DIR"
-