diff options
Diffstat (limited to 'opentox-webservices.sh')
| -rwxr-xr-x | opentox-webservices.sh | 8 |
1 files changed, 4 insertions, 4 deletions
diff --git a/opentox-webservices.sh b/opentox-webservices.sh index cc53d04..88f864c 100755 --- a/opentox-webservices.sh +++ b/opentox-webservices.sh @@ -65,21 +65,21 @@ cmd="$GIT submodule update" && run_cmd "$cmd" "Fminer Update" cd "libfminer/libbbrc">>$LOG 2>&1 $GIT checkout $OT_BRANCH>>$LOG 2>&1 $GIT pull >>$LOG 2>&1 -cd - +cd - >>$LOG 2>&1 cd "libfminer/liblast">>$LOG 2>&1 $GIT checkout $OT_BRANCH>>$LOG 2>&1 $GIT pull >>$LOG 2>&1 -cd - +cd - >>$LOG 2>&1 for mylib in bbrc last; do cmd="sed -i 's,^INCLUDE_OB.*,INCLUDE_OB\ =\ -I$OB_DEST/include/openbabel-2.0,g' $WWW_DEST/opentox/algorithm/libfminer/lib$mylib/Makefile; sed -i 's,^LDFLAGS_OB.*,LDFLAGS_OB\ =\ -L$OB_DEST/lib,g' $WWW_DEST/opentox/algorithm/libfminer/lib$mylib/Makefile" && run_cmd "$cmd" "Makefile $mylib (OB)" cmd="sed -i 's,^INCLUDE_RB.*,INCLUDE_RB\ =\ -I$RUBY_DEST/lib/ruby/1.8/`uname -m`-linux,g' $WWW_DEST/opentox/algorithm/libfminer/lib$mylib/Makefile" && run_cmd "$cmd" "Makefile $mylib (RB)" done cd "libfminer/libbbrc">>$LOG 2>&1 cmd="make ruby" && run_cmd "$cmd" "Make BBRC" -cd - +cd - >>$LOG 2>&1 cd "libfminer/liblast">>$LOG 2>&1 cmd="make ruby" && run_cmd "$cmd" "Make LAST" -cd - +cd - >>$LOG 2>&1 cd "last-utils">>$LOG 2>&1 $GIT checkout $OT_BRANCH>>$LOG 2>&1 $GIT pull >>$LOG 2>&1 |