#!/bin/sh # Configuration file for Opentox installer. # Author: Christoph Helma, Andreas Maunz. # 1) Base setup OT_DIST="debian" # Linux distribution (debian, ubuntu) OT_INSTALL="local" # Type (gem, local, server) OT_BRANCH="development" # Maturity (development -need SSH key at Github-, master) # 2) Where binaries are installed OT_PREFIX="$HOME/opentox-ruby" #OT_JAVA_HOME="/usr/lib/jvm/java-6-openjdk" # use "/usr/lib/jvm/java-6-openjdk-amd64" for 64bit system architecture # 3) What versions to install #OB_NUM_VER="2.3.1" RAPTOR2_NUM_VER="2.0.6" RASQAL_NUM_VER="0.9.28" #REDIS_NUM_VER="2.4.4" #RUBY_NUM_VER="2.0.0-p247" FOUR_STORE_VER="4store-v1.1.5" #REDIS_URL="http://redis.googlecode.com/files" REDLAND_DWL="http://download.librdf.org" REDLAND_APT_KEY="https://purl.org/net/dajobe/gnupg.asc" FOUR_STORE_URL="http://4store.org/download" # 4) Server settings. #OHM_PORT="6379" # set to port (no colon) # 5) Backend name. BACKEND_NAME="opentox" # Done. ### Nothing to gain from changes below this line. #JAVA_CONF="$HOME/.opentox/java.sh" FST_CONF="$HOME/.opentox/4S.sh" #OB_CONF="$HOME/.opentox/OB.sh" #R_CONF="$HOME/.opentox/R.sh" RAPTOR2_CONF="$HOME/.opentox/RAPTOR2.sh" RASQAL_CONF="$HOME/.opentox/RASQAL.sh" #REDIS_CONF="$HOME/.opentox/REDIS.sh" OT_UI_CONF="$HOME/.opentox/opentox-ui.sh" OT_TOOLS_CONF="$HOME/.opentox/ot-tools.sh" OT_DEFAULT_CONF="$HOME/.opentox/config/default.rb" #OB_VER="openbabel-$OB_NUM_VER" RAPTOR2_VER="raptor2-$RAPTOR2_NUM_VER" RASQAL_VER="rasqal-$RASQAL_NUM_VER" #REDIS_VER="redis-$REDIS_NUM_VER" #OB_DEST="$OT_PREFIX/$OB_VER" #OB_DEST_BINDINGS="$OT_PREFIX/openbabel-ruby-install" #R_DEST="$OT_PREFIX/r-packages" #RUBY_DWL="http://ftp.ruby-lang.org/pub/ruby/2.0" RAPTOR2_DWL="$REDLAND_DWL/source/$RAPTOR2_VER.tar.gz" RASQAL_DWL="$REDLAND_DWL/source/$RASQAL_VER.tar.gz" #REDIS_DWL="$REDIS_URL/$REDIS_VER.tar.gz" #REDIS_DIR="$OT_PREFIX/$REDIS_VER" #REDIS_SERVER_CONF="$REDIS_DIR/redis.conf" REDLAND_DEB="$REDLAND_DWL/binaries/$OT_DIST/unstable" FOUR_STORE_DWL="$FOUR_STORE_URL/$FOUR_STORE_VER.tar.gz"