diff options
| author | gebele <gebele@in-silico.ch> | 2017-12-12 13:57:28 +0000 |
|---|---|---|
| committer | gebele <gebele@in-silico.ch> | 2017-12-12 13:57:28 +0000 |
| commit | f5a0d4ab14e55a72c4cb182ce0e81f599e4857ed (patch) | |
| tree | a20c2f2cbb0a0f7581fbae014ad571dbdb92ee47 /application.rb | |
| parent | 332c68dc1bc59538a8a749ef592d5700ba316357 (diff) | |
prediction object adjusted for single predictions
Diffstat (limited to 'application.rb')
| -rw-r--r-- | application.rb | 9 |
1 files changed, 6 insertions, 3 deletions
diff --git a/application.rb b/application.rb index 223b81a..04b5aa3 100644 --- a/application.rb +++ b/application.rb @@ -354,7 +354,8 @@ post '/predict/?' do if model.model.name =~ /kazius/ sa_prediction = KaziusAlerts.predict(@compound.smiles) - lazar_mutagenicity = model.predict(@compound) + prediction = model.predict(@compound) + lazar_mutagenicity = prediction confidence = 0 lazar_mutagenicity_val = (lazar_mutagenicity[:value] == "non-mutagenic" ? false : true) if sa_prediction[:prediction] == false && lazar_mutagenicity_val == false @@ -366,9 +367,11 @@ post '/predict/?' do elsif sa_prediction[:prediction] == true && lazar_mutagenicity_val == false confidence = ( 1 - sa_prediction[:error_product] ) - 0.57 end - prediction << [lazar_mutagenicity, {:prediction => sa_prediction, :confidence => confidence}] + prediction["Consensus prediction"] = sa_prediction[:prediction] == false ? "non-mutagenic" : "mutagenic" + prediction["Consensus confidence"] = confidence.signif(3) + prediction["Structural alerts for mutagenicity"] = sa_prediction[:matches].blank? ? "none" : sa_prediction[:matches].collect{|a| a.first}.join("; ") else - prediction << model.predict(@compound) + prediction = model.predict(@compound) end prediction_object[:compound] = @compound.id prediction_object[:model] = model.id |