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-rw-r--r--docker/Dockerfile46
1 files changed, 18 insertions, 28 deletions
diff --git a/docker/Dockerfile b/docker/Dockerfile
index a606b9a..b7ba3c1 100644
--- a/docker/Dockerfile
+++ b/docker/Dockerfile
@@ -23,12 +23,17 @@ RUN pacman -Scc --noconfirm
RUN R -e "install.packages('Rserve', repos='http://rforge.net/')"
RUN pip install xlsx2csv
+
+# install lazar-gui gem
+RUN echo 'gem: --no-document' > /etc/gemrc
+RUN gem install lazar-gui
+
RUN useradd -ms /bin/bash ist
-# mongodb has been removed from main repositories
USER ist
WORKDIR /home/ist
RUN mkdir data
+# mongodb has been removed from main repositories, AUR installation
RUN mkdir src
WORKDIR /home/ist/src
RUN wget https://aur.archlinux.org/cgit/aur.git/snapshot/mongodb-bin.tar.gz
@@ -36,38 +41,23 @@ RUN tar -xvzf mongodb-bin.tar.gz
WORKDIR /home/ist/src/mongodb-bin
RUN makepkg -s --noconfirm
-# installation requires root
-USER root
-RUN pacman -U --noconfirm /home/ist/src/mongodb-bin/mongodb-bin*.pkg.tar.xz
-
-# install lazar-gui gem
-RUN echo 'gem: --no-document' > /etc/gemrc
-
-#RUN gem install lazar-gui
-RUN gem install lazar
-RUN gem install qsar-report
-RUN gem install sinatra haml sass rdiscount unicorn
-
-USER ist
-WORKDIR /home/ist
-RUN rm -r src
-
-# lazar-gui
-RUN git clone https://git.in-silico.ch/lazar-gui
-WORKDIR lazar-gui
-RUN git checkout prerelease
-
-# SWAGGER for API
+# rest api swagger gui
WORKDIR /home/ist
RUN git clone https://github.com/swagger-api/swagger-ui.git
COPY swagger.html /home/ist/swagger-ui/dist/index.html
-# TODO adjust to lazar-gui gem path
-RUN ln -s /home/ist/swagger-ui/dist/swagger-ui-bundle.js /home/ist/lazar-gui/public/swagger-ui-bundle.js
-RUN ln -s /home/ist/swagger-ui/dist/swagger-ui-standalone-preset.js /home/ist/lazar-gui/public/swagger-ui-standalone-preset.js
-RUN ln -s /home/ist/swagger-ui/dist/swagger-ui.css /home/ist/lazar-gui/public/swagger-ui.css
-
# start script
COPY start.sh /home/ist/start.sh
+# mongodb installation requires root
+USER root
+RUN pacman -U --noconfirm /home/ist/src/mongodb-bin/mongodb-bin*.pkg.tar.xz
+
+# swagger links
+RUN ln -s /home/ist/swagger-ui/dist/swagger-ui-bundle.js $(gem which "lazar-gui"|sed 's#/lib/lazar-gui.rb/##')/public/swagger-ui-bundle.js
+RUN ln -s /home/ist/swagger-ui/dist/swagger-ui-standalone-preset.js $(gem which "lazar-gui"|sed 's#/lib/lazar-gui.rb/##')/public/swagger-ui-standalone-preset.js
+RUN ln -s /home/ist/swagger-ui/dist/swagger-ui.css $(gem which "lazar-gui"|sed 's#/lib/lazar-gui.rb/##')/public/swagger-ui.css
+
+USER ist
+RUN rm -r /home/ist/src
ENTRYPOINT ["/home/ist/start.sh"]