diff options
Diffstat (limited to 'views/batch.haml')
| -rw-r--r-- | views/batch.haml | 155 |
1 files changed, 48 insertions, 107 deletions
diff --git a/views/batch.haml b/views/batch.haml index 0e7efc7..6bc2354 100644 --- a/views/batch.haml +++ b/views/batch.haml @@ -1,109 +1,50 @@ -%div.well - %a.btn.btn-warning{:href => to('/predict')} - %span.glyphicon.glyphicon-menu-left{:aria=>{:hidden=>"true"}} +:javascript + // kill task pid if page is reloaded, `false` makes the request synchronous + window.addEventListener('unload', ktpid, false); + function ktpid() { + var client = new XMLHttpRequest(); + client.open("GET", '//#{$host_with_port}/prediction/task?ktpid=#{@pid}', false); + client.setRequestHeader("Content-Type", "application/json"); + client.send(null); + }; +%div.card + %a.btn.btn-outline-info{:href => "//#{$host_with_port}/predict?tpid=#{@pid}"} + %span.fa.fa-caret-left{:aria=>{:hidden=>"true"}} New Prediction - %a.btn.btn-success{:id => "downbutton", :href=>"#{to("/predict/#{@tmppath}/#{@filename}")}", :title=>"download"} - %span.glyphicon.glyphicon-download-alt - Download CSV +%div.card.bg-light + %div.card-body + %h3.card-title="Batch prediction results for: #{@filename}" + + // prepare variable values for javascript + // increase timer interval for large datasets + - timer = 10000#((@compounds_size/1000) == 0 ? 1000 : ((@compounds_size/1000)*1000)) + // process batch predictions + - @models.each_with_index do |model,idx| + - m = Model::Validation.find model + - task = @tasks[idx].id + #result.card.bg-light{:id=>idx} + %div.card-body + %div.row + %div.col-6 + %h5.card-title="#{m.endpoint} (#{m.species})" + #pager{:id=>idx} + %div.col-6 + %a.btn.btn-outline-info.btn-sm.disabled{:id => "detailsbutton_#{idx}", :data=>{:toggle=>"collapse"}, :href=>"javascript:void(0)", :onclick=>"pagePredictions('//#{$host_with_port}/prediction/task/?predictions=#{task}','#{model}','#{idx}','#{@compounds_size}')"} + %span.fa.fa-caret-right + Details + %a.btn.btn-outline-info.btn-sm.disabled{:id => "downbutton_#{idx}", :href=>"//#{$host_with_port}/predict/batch/download?tid=#{task}", :title=>"download"} + %span.fa.fa-download + CSV + %p{:id=>"est_#{idx}"} + waiting ... + %img.h2{:src=>"/images/wait30trans.gif", :id=>"circle_#{idx}", :class=>"circle", :alt=>"wait", :style=>"display:none;"} + :javascript + $(document).ready(function() { + taskProgress('#{idx}','#{timer}','//#{$host_with_port}/prediction/task/?turi=#{task}'); + }); + #data-container.card.d-none.table-responsive{:id=>idx} + :javascript +%div.modal.fade{:id=>"details", :tabindex=>"-1", :role=>"dialog"} + %div.modal-dialog.modal-lg{:role=>"document"} + %div.modal-content - / show file name - %topline - %div.row - %div.col-md-4 - %h3 Batch Prediction Results: - %div.col-md-8 - %h3= @filename - - / displays all prediction result in one table - %div.table-responsive - %table.table.table-bordered{:id=>"batch", :style=>"background-color:white;"} - %tbody - - if @warnings - - @warnings.each do |warning| - %tr - %td - %b Warning - %td - = warning.sub(/\b(tmp\/)\b/,"") - - @view.each do |compound, array| - %tr - %td{:style=>"vertical-align:top;"} - %p= compound.svg - %p= compound.smiles - - array.each do |model,prediction| - %td{:style=>"vertical-align:top;white-space:nowrap;"} - - model.model.class.to_s.match("Classification") ? type = "Classification" : type = "Regression" - - unit = model.unit - - %b{:class => "title"} - = "#{model.endpoint.gsub('_', ' ')} (#{model.species})" - - / check for prediction - - if prediction[:value] - %p - / show model type (classification|regression) - %b Type: - = type - %p - / check for database hit - - if prediction[:info] =~ /\b(identical)\b/i - - / show message about dbhit and measurements - %p - %b Compound is part of the training dataset - %p - %b Measured activity: - %br - - if prediction[:measurements].is_a?(Array) - = (type == "Regression") ? prediction[:measurements].collect{|value| "#{value.delog10.signif(3)} (#{unit})</br>#{compound.mmol_to_mg(value.delog10).signif(3)} #{unit =~ /mmol\/L/ ? "(mg/L)" : "(mg/kg_bw/day)"}"}.join("</br>") : prediction[:measurements].join(", ") - - else - = (type == "Regression") ? "#{prediction[:measurements].delog10.signif(3)} (#{unit})</br>#{compound.mmol_to_mg(prediction[:measurements].delog10).signif(3)} #{(unit =~ /\b(mmol\/L)\b/) ? "(mg/L)" : "(mg/kg_bw/day)"}" : prediction[:measurements] - - - / show prediction - %p - %b Prediction: - %br - = (type == "Regression") ? "#{prediction[:value].delog10.signif(3)} (#{unit})</br>#{compound.mmol_to_mg(prediction[:value].delog10).signif(3)} #{(unit =~ /\b(mmol\/L)\b/) ? "(mg/L)" : "(mg/kg_bw/day)"}" : prediction[:value] - - / show prediction interval or probability - %p - - if type == "Regression" - %b 95% Prediction interval: - - interval = (prediction[:prediction_interval].nil? ? nil : prediction[:prediction_interval]) - %br - = interval.nil? ? "" : "#{interval[1].delog10.signif(3)} - #{interval[0].delog10.signif(3)} (#{unit})" - %br - = "#{compound.mmol_to_mg(interval[1].delog10).signif(3)} - #{compound.mmol_to_mg(interval[0].delog10).signif(3)} #{(unit =~ /\b(mmol\/L)\b/) ? "(mg/L)" : "(mg/kg_bw/day)"}" if !prediction[:prediction_interval].nil? - - else - %b Probability: - - unless prediction[:probabilities].nil? - - probabilities = "" - - prediction[:probabilities].each{|k,v| probabilities += "#{k}: #{v.signif(3)}<br>"} - %br - = probabilities - / show warnings - %p - - if !prediction[:info].blank? - %b Info: - %br - %p=prediction[:info].sub(/\'.*\'/,"").sub(/,/, ",<br>") - - if !prediction[:warnings].blank? - %b Warnings: - - prediction[:warnings].uniq.each do |warning| - %br - %p=warning.sub(/substances/, "substances<br>").sub(/prediction\:/, "prediction\:<br>") - - / no prediction - - else - %br - - if !prediction[:info].blank? - %b Info: - %br - %p=prediction[:info].sub(/\'.*\'/,"").sub(/,/, ",<br>") - - if !prediction[:warnings].blank? - %b Warnings: - - prediction[:warnings].uniq.each do |warning| - %br - %p=warning.sub(/substances/, "substances<br>").sub(/prediction\:/, "prediction\:<br>") - %tr |