diff options
Diffstat (limited to 'views/neighbors.haml')
| -rw-r--r-- | views/neighbors.haml | 31 |
1 files changed, 21 insertions, 10 deletions
diff --git a/views/neighbors.haml b/views/neighbors.haml index 6001605..6011a6d 100644 --- a/views/neighbors.haml +++ b/views/neighbors.haml @@ -9,7 +9,17 @@ #tabs %ul.nav.nav-tabs.nav-justified{:id=>"neighborTabs", :role=>"tablist"} / each model a tab head ; + / hash for predictionFeature + - predictionFeature = {} - @models.each_with_index do |model,i| + / get predictionFeature type + - m = Model::Lazar.find model.model_id.to_s + - predFeature = Feature.find m.prediction_feature_id.to_s + / define feature type (numeric : nominal) + - predFeatureType = (predFeature.numeric? ? "numeric" : "nominal") + / use prediction feature id for neighbor compound features + - predFeatureId = m.prediction_feature_id.to_s + - predictionFeature[i] = {"id" => predFeatureId, "type" => predFeatureType} %li{:class => ("active" if i == 0)} %a{:href => "#results_#{i+1}", :id => "linkTab#{i+1}", data: {toggle:"tab"}} = "#{model.endpoint} (#{model.species})" @@ -29,7 +39,7 @@ debug: false, theme: "bootstrap", headerTemplate: '{content} {icon}', - widgets: ['zebra', 'columns', 'uitheme', 'stickyHeaders'], + widgets: ['columns', 'uitheme', 'stickyHeaders'], widgetOptions: { stickyHeaders_attachTo : '.tab-content', stickyHeaders : '', @@ -74,19 +84,20 @@ - prediction[:neighbors].uniq.each_with_index do |neighbor,count| %tr / Compound + - c = Compound.find(neighbor["_id"]) %td{:style =>"vertical-align:middle;padding-left:1em;width:50%;"} - /%a.btn.btn-link{:href => "#details#{j+1}", data: { toggle: "modal", remote: to("/prediction/#{CGI.escape(neighbor[0].to_s)}/details"), :id=>"link#{j+1}#{count}"}} - %p= Compound.find(neighbor[0]).svg - %p= Compound.find(neighbor[0]).smiles - - c = Compound.find(neighbor[0]) - //- mw = c.molecular_weight - / Measured Activity + /%a.btn.btn-link{:href => "#details#{j+1}", data: { toggle: "modal", remote: to("/prediction/#{CGI.escape(neighbor["_id"])}/details"), :id=>"link#{j+1}#{count}"}} + %p= c.svg + %p= c.smiles + - mw = c.molecular_weight + / Measured Activity = compound.features %td{:style =>"vertical-align:middle;padding-left:1em;width:20%;white-space:nowrap;"} - = (type == "Regression") ? neighbor[2].collect{|n| weight = c.mmol_to_mg(n); '%.2e' % n + " (#{@models[j].unit})"+"|#{'%.2e' % weight} (mg/kg_bw/day)"}.join("</br>") : neighbor[2].join(", ") - / Similarity + - features = c.features.collect{|k,v| v if k == predictionFeature[j]["id"] }.compact.flatten + = (predictionFeature[j]["type"] == "numeric") ? features.collect{|v| weight = c.mmol_to_mg(v); '%.2e' % v + " (#{@models[j].unit})"+" | #{'%.2e' % weight} (mg/kg_bw/day)"}.join("</br>") : features.join("</br>") + / Similarity = tanimoto %td{:style =>"vertical-align:middle;padding-left:1em;width:20%;"} / TODO differentiate between no neighbors found and compound found in dataset, display neighbors for compounds in dataset? - = neighbor[1] != nil ? neighbor[1].round(2) : "Not enough similar compounds </br>in training dataset." + = neighbor[:tanimoto] != nil ? neighbor[:tanimoto].to_f.round(3) : "Not enough similar compounds </br>in training dataset." - else %span.btn.btn-default.disabled |