From 44d9ceb30f6f8649f2d6fc179a925302f14d8a05 Mon Sep 17 00:00:00 2001
From: gebele <gebele@in-silico.ch>
Date: Mon, 16 Jul 2018 14:20:03 +0000
Subject: add mazzatorta

---
 views/batch.haml      | 10 +++++++---
 views/predict.haml    | 12 +++++++++---
 views/prediction.haml | 22 +++++++++++++++++++++-
 3 files changed, 37 insertions(+), 7 deletions(-)

(limited to 'views')

diff --git a/views/batch.haml b/views/batch.haml
index 1aa6779..165b64b 100644
--- a/views/batch.haml
+++ b/views/batch.haml
@@ -76,7 +76,7 @@
         callback: function(data, pagination) {
           var html = simpleTemplating(data);
           $('#data-container_'+id).html(html);
-          $('#data-container_'+id).css("min-height", $(window).height() + "px" );
+          //$('#data-container_'+id).css("min-height", $(window).height() + "px" );
         }
       });
     } else if (span.className = "glyphicon glyphicon-menu-down"){
@@ -105,8 +105,12 @@
     #result.panel{:id=>idx}
       %div.row
         %div.col-md-6
-          %h5= (model == "Cramer") ? "Oral toxicity (Cramer rules)" : (m.endpoint =~ /Mutagenicity/i ? "Consensus mutagenicity" : "#{m.endpoint} (#{m.species})")
-          #pager{:id=>idx}
+          - if model =~ /Mazzatorta/
+            %h5= "Lowest observed adverse effect level (LOAEL) (Mazzatorta) Rats"
+            #pager{:id=>idx}
+          - else
+            %h5= (model == "Cramer") ? "Oral toxicity (Cramer rules)" : (m.endpoint =~ /Mutagenicity/i ? "Consensus mutagenicity" : "#{m.endpoint} (#{m.species})")
+            #pager{:id=>idx}
         %div.col-md-6.h5
           %a.btn.btn-default.btn-xs.disabled{:id => "detailsbutton_#{idx}", :data=>{:toggle=>"collapse"}, :href=>"javascript:void(0)", :onclick=>"pagePredictions('#{task}','#{model}','#{idx}')", :style=>"font-size:small;"}
             %span.glyphicon.glyphicon-menu-right
diff --git a/views/predict.haml b/views/predict.haml
index d638451..0afcc99 100644
--- a/views/predict.haml
+++ b/views/predict.haml
@@ -186,8 +186,8 @@
       - @endpoints.each do |endpoint|
         %div{:id=>endpoint.gsub(/\s+/, "_")}
           %h4.head-back=endpoint
-          - unless endpoint =~ /^Oral/
-            - @models.select{|m| m.endpoint == endpoint}.each do |model|
+          - if endpoint !~ /^Oral|Mazzatorta/
+            - @models.select{|m| endpoint = endpoint.gsub("(lazar)","").strip if endpoint =~ /lazar/; m.endpoint == endpoint}.each do |model|
               %div.row{:id => model.id,:style=>"margin-bottom:1em;"}
                 %span.col-lg-4.col-md-4.col-sm-4.col-xs-4
                   %input.check{:type => "checkbox", :name => "selection[#{model.id}]", :id => "selection[#{model.species.gsub(/\s+/, "_")}]", :value => true, :disabled => false}
@@ -223,12 +223,18 @@
                     });
                   }
                 }
-          - else
+          - elsif endpoint =~ /^Oral/
             %div.row{:id => "Cramer",:style=>"margin-bottom:1em;"}
               %span.col-lg-4.col-md-4.col-sm-4.col-xs-4
                 %input.check{:type => "checkbox", :name => "selection[Cramer]", :id => "selection[Cramer]", :value => true, :disabled => false}
                 %label{:for => "selection[Cramer]"}
                   Cramer rules
+          - elsif endpoint =~ /Mazzatorta/
+            %div.row{:id => "Mazzatorta",:style=>"margin-bottom:1em;"}
+              %span.col-lg-4.col-md-4.col-sm-4.col-xs-4
+                %input.check{:type => "checkbox", :name => "selection[Mazzatorta]", :id => "selection[Mazzatorta]", :value => true, :disabled => false}
+                %label{:for => "selection[Mazzatorta]"}
+                  Rats
   %fieldset#bottom.well
     %div.row
       %div.col-md-2
diff --git a/views/prediction.haml b/views/prediction.haml
index b4b51ca..152efc9 100644
--- a/views/prediction.haml
+++ b/views/prediction.haml
@@ -23,6 +23,8 @@
           - @model_types = {}
           - @dbhit = {}
           - toxtree = @predictions.pop if @toxtree == true
+          - mazzatorta = @predictions.find{|p| p["mazzatorta"]}
+          - @predictions.delete(mazzatorta) if mazzatorta
           - unless @predictions.blank?
             - @predictions.each_with_index do |prediction,i|
               - if prediction["Consensus prediction"]
@@ -138,7 +140,7 @@
                       %br
                       =prediction[:warnings].join("</br>")
 
-          / show Cramer rules if checked
+          / Cramer
           - if @toxtree == true
             %td{:style=>"vertical-align:top;white-space:nowrap;"}
               %b.title Oral toxicity (Cramer rules)
@@ -151,6 +153,24 @@
               %br
               =toxtree.last["Cramer rules, with extensions"]
 
+          / Mazzatorta
+          - if mazzatorta
+            %td{:style=>"vertical-align:top;white-space:nowrap;"}
+              %b.title Lowest observed adverse effect level (LOAEL) (Rats) (Mazzatorta)
+              %p
+              - hash = mazzatorta["mazzatorta"]
+              - unless hash.keys.include?("warnings")
+                %b Prediction:
+                %br
+                = "#{hash[:mmol_prediction]} (mmol/kg_bw/day)"
+                %br
+                = "#{hash[:prediction]} (mg/kg_bw/day)"
+              - else
+                %b Warnings:
+                %br
+                = "#{hash[:warnings]}"
+
+
   / always show the neighbors table, message is given there. Except only Cramer is selected.
   - unless @predictions.blank?
     = haml :neighbors, :layout => false
-- 
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