.predictions .back %h1 %img{:src=>"/images/arrow_left_float.png", :alt=>"<"} %a{:href => to('/predict')} New Prediction / displays all prediction results .overview %table{:width=>"100%", :cellspacing=>"1", :id=>"overview"} %thead %tr %caption %h2 Prediction Results: %tbody %tr %td{:id=>"compound"} %a{:href => to("/prediction/#{CGI.escape(@compound.uri)}/details"), :id=>"linkCompound", :target=>"details_overview"} %img{:src=>"#{@compound.uri}/image", :alt=>"Compound image not available", :width=>"150", :height=>"150"} %br %br %img{:src=>"/images/arrow_up_float.png", :alt=>"^"} :javascript $(function() { $("a#linkCompound").on('click', function(e) { $('#iframe_overview').bPopup(); }); }); - count=0 / var for rule to load neighbors page. - @@neighbors_available = 1 - @@predictions.each do |pa| / prediction of one model - pa.each do |p| - $logger.debug "inspect p: #{p.inspect}\n" - $logger.debug "inspect data_entries: #{p.data_entries}\n" / p.data_entries > 1 = neighbors available - p.data_entries.length > 1 ? @@neighbors_available = p.data_entries.length : @@neighbors_available / prevent conversion of nil - c = p.data_entries[0][0] != nil ? p.data_entries[0][0] : '' - $logger.debug "inspect c: #{c.inspect}\n" - case c - when /(0|false)/ - c = "non-carcinogen" - when /(1|true)/ - c = "carcinogen" %td %b{:class => "title"} = @@prediction_models[count].title.split(" ").first %br %br %b Result: %b{:class => c[0]} = (c != '' ? c : "No prediction result.") / title must be empty for tooltip %a{:href=>"#result", :title=>"", :id=>"result"} %img{:src=>"/images/info_white.png"} .tooltip{:style=>"font-weight: normal; font-size: 1em; width: 50%; text-align: left;"} %dt Result %dd %code lazar calculates searches the training dataset for similar compounds (neighbors) and calculates the prediction from their measured activities. lazar calculates predictions using %ul %li a majority vote (weighted by compound similarity) for %em classification ( %a{:href=>"http://www.in-silico.de/articles/modi020905.pdf"} original publication ) %li a local QSAR model based on neighbors for %em regression ( %a{:href=>"http://www.in-silico.de/articles/mh_tf.pdf"} original publication ) Please keep in mind that predictions are based on the measured activities of neighbors. %br .confidence %b Confidence: = p.data_entries[0][1] != nil ? p.data_entries[0][1].round(3) : "" / title must be empty for tooltip %a{:href=>"#confidence", :title=>"", :id=>"confidence"} %img{:src=>"/images/info_white.png"} .tooltip{:style=>"font-weight: normal; font-size: 1em; width: 50%; text-align: left;"} %dt Confidence %dd Indicates the applicability domain of a model. Predictions with a high confidence can be expected to be more reliable than predictions with low confidence. Confidence values may take any value between 0 and 1. For most models confidence > 0.025 is a sensible (hard) cutoff to distiguish between reliable and unreliable predictions. %br %a{:href=> "#tabs", :id=>"link#{count}"} %img{:src=>"/images/arrow_down_float.png", :alt=>"v"} :javascript $("a#link#{count}").click(function () { $(".results").show(); document.getElementById('tabs').focus(); $("#tabs").tabs({ active: "#{count}" }); }); - count+=1 - if @@neighbors_available > 1 = haml :neighbors, :layout => false - else %h2 no neighbors available %iframe{:id=>"iframe_overview", :name=>"details_overview", :height=>"90%", :width=>"90%", :style=>"display:none;border:0px"}