.predictions
  .back
    %h1
      %img{:src=>"/images/arrow_left_float.png", :alt=>"<"}
        %a{:href => to('/predict')} New Prediction

  / displays all prediction result in first table
  .overview
    %table{:width=>"100%", :cellspacing=>"1", :id=>"overview"}
      %thead
        %tr
          %caption
            %h2 Prediction Results:

      %tbody
        %tr
          %td{:id=>"compound"}
            %a{:href => to("/prediction/#{CGI.escape(@compound.uri)}/details"), :id=>"linkCompound", :target=>"details_overview"}
              %img{:src=>"#{@compound.uri}/image", :alt=>"Compound image not available", :width=>"150", :height=>"150"}
            %p
            %a{:href => to("/prediction/#{CGI.escape(@compound.uri)}/details"), :id=>"linkCompound", :target=>"details_overview"} Names and synonyms
            %p
            :javascript
              $(function() {
                $("a#linkCompound").on('click', function(e) {
                  $('#iframe_overview').bPopup();
                });
              });
          - count=0
          - @predictions.each do |pa|
            / unpack to single array/prediction
            / if p.data_entries array[0].size == 3 -> database hit
            / change 'result' if database hit
            / change 'confidence' if database hit
            - pa.each do |p|
              / prevent conversion of nil
              /- $logger.debug "data entries in prediction array:\t#{p.data_entries}\n"
              - database_hit = 0
              - if p.data_entries[0].size == 3
                - database_hit = 1
              - c = p.data_entries[0][0] != nil ? p.data_entries[0][0] : ''
              - case c
              - when /(0|false)/
                - c = "non-carcinogen"
              - when /(1|true)/
                - c = "carcinogen"
              - else
                - c = Array.new
                - c[0] = (p.data_entries[0][0].class == Float) ? p.data_entries[0][0].round(3) : (p.data_entries[0][0] != nil ? p.data_entries[0][0] : "no prediction")
              %td
                %b{:class => "title"}
                  = @prediction_models[count].title.split(" ").first
                - @model_uri = @prediction_models[count].uri
                %p
                / model type (classification|regression)
                %b Type:
                = @model_type[count]
                %p
                - unless database_hit > 0
                  %b Result:
                  %b{:class => c[0]}
                    - if c.class == String
                      = (c != '' ? c : "No prediction result.")
                    - else
                      = (c[0] != '' ? c[0] : "No prediction result.")
                  / title must be empty for tooltip
                  %a{:href=>"#result", :title=>"", :id=>"result"}
                    %img{:src=>"/images/info_white.png"}
                  .tooltip{:style=>"font-weight: normal; font-size: 1em; width: 50%; text-align: left;"}
                    %dt
                      Result
                    %dd
                      %code lazar 
                      calculates searches the training dataset for similar compounds (neighbors) 
                      and calculates the prediction from their measured activities. lazar 
                      calculates predictions using
                      %ul
                        %li a majority vote (weighted by compound similarity) for 
                        %em classification 
                        (
                        %a{:href=>"http://www.frontiersin.org/Journal/10.3389/fphar.2013.00038/abstract", :target=>"_blank"} original publication
                        )
                        %li a local QSAR model based on neighbors for
                        %em regression
                        (
                        %a{:href=>"http://www.frontiersin.org/Journal/10.3389/fphar.2013.00038/abstract", :target=>"_blank"} original publication
                        )
                      Please keep in mind that predictions are based on the measured activities of neighbors.
                  %p
                  .confidence
                    %b Confidence:
                    = p.data_entries[0][1] != nil ? p.data_entries[0][1].round(3) : "-"
                    / title must be empty for tooltip
                    %a{:href=>"#confidence", :title=>"", :id=>"confidence"}
                      %img{:src=>"/images/info_white.png"}
                    .tooltip{:style=>"font-weight: normal; font-size: 1em; width: 50%; text-align: left;"}
                      %dt
                        Confidence
                      %dd
                        Indicates the applicability domain of a model.
                        Predictions with a high confidence can be expected to be more reliable than predictions 
                        with low confidence.
                        Confidence values may take any value between 0 and 1.
                        For most models confidence > 0.025 is a sensible (hard) cutoff to distiguish between 
                        reliable and unreliable predictions.
                  %p
                  /TODO add tooltip for significant ftagments and descriptors
                  - if @model_type[count] =~ /classification/i
                    / Significant fragments:
                    %a{:href => to("/prediction/#{CGI.escape(@model_uri)}/#{@model_type[count]}/#{CGI.escape(@compound.uri)}/fingerprints"), :id=>"linkPredictionSf", :target=>"details_overview"}Significant fragments
                    :javascript
                      $(function() {
                        $("a#linkPredictionSf").on('click', function(e) {
                          $('#iframe_overview').bPopup();
                        });
                      });
                  - if @model_type[count] =~ /regression/i
                    / Descriptors
                    %a{:href => to("/prediction/#{CGI.escape(@model_uri)}/#{@model_type[count]}/#{CGI.escape(@compound.uri)}/fingerprints"), :id=>"linkPredictionSf", :target=>"details_overview"} Descriptors
                    :javascript
                      $(function() {
                        $("a#linkPredictionSf").on('click', function(e) {
                          $('#iframe_overview').bPopup();
                        });
                      });
                  / title must be empty for tooltip
                  -#%a{:href =>"#sfragments", :title=>"", :id=>"sfragments"}
                    %img{:src=>"/images/info_white.png"}
                  -#.tooltip{:style=>"font-weight: normal; font-size: 1em; width: 50%; text-align: left;"}
                    %dt
                      Significant fragments
                    %dd
                      Significant fragments are solely used to determine activity specific similarities of neighbors.
                  %p
                  %b Neighbors:
                  %a{:href=> "#tabs", :id=>"link#{count}"}
                    %img{:src=>"/images/arrow_down_float.png", :alt=>"v"}
                    :javascript
                      $("a#link#{count}").click(function () {
                        $(".results").show();
                        document.getElementById('tabs').focus();
                        $("#tabs").tabs({ active: "#{count}" });
                      });
                  %p
                  - count+=1
                - else # database hit
                  %b Database hit: 
                  %br Compound found in training dataset
                  %p
                  %b Measured activity:
                  = p.data_entries[0][2]
                  %p
                  %b Neighbors:
                  %a{:href=> "#tabs", :id=>"link#{count}"}
                    %img{:src=>"/images/arrow_down_float.png", :alt=>"v"}
                    :javascript
                      $("a#link#{count}").click(function () {
                        $(".results").show();
                        document.getElementById('tabs').focus();
                        $("#tabs").tabs({ active: "#{count}" });
                      });
                    
                  - count+=1

  / always show the neighbors table, message is given there  
  = haml :neighbors, :layout => false, :model_type => @model_type
%iframe{:id=>"iframe_overview", :name=>"details_overview", :height=>"95%", :width=>"95%", :style=>"display:none;border:0px"}