From 12f88bf241f653936cb3ed959a989cb71eca47f0 Mon Sep 17 00:00:00 2001
From: gebele <gebele@in-silico.ch>
Date: Thu, 23 Nov 2017 11:49:52 +0100
Subject: dropped SERVICE var

---
 config.ru      | 3 +--
 lib/api.rb     | 4 ++--
 lib/swagger.rb | 4 ++--
 3 files changed, 5 insertions(+), 6 deletions(-)

diff --git a/config.ru b/config.ru
index 1dd7b70..fe7962c 100644
--- a/config.ru
+++ b/config.ru
@@ -1,5 +1,4 @@
-SERVICE = "lazar-rest"
 require 'bundler'
 Bundler.require
 require File.expand_path './lib/lazar-rest.rb'
-run Sinatra::Application
\ No newline at end of file
+run Sinatra::Application
diff --git a/lib/api.rb b/lib/api.rb
index 98623dc..28e33df 100644
--- a/lib/api.rb
+++ b/lib/api.rb
@@ -2,8 +2,8 @@
 get "/api/api.json" do
   response['Content-Type'] = "application/json"
   api_file = File.join("api", "api.json")
-  bad_request_error "API Documentation in Swagger JSON is not implemented.", uri("/#{SERVICE}/api") unless File.exists?(api_file)
+  bad_request_error "API Documentation in Swagger JSON is not implemented." unless File.exists?(api_file)
   api_hash = JSON.parse(File.read(api_file))
   api_hash["host"] = request.env['HTTP_HOST']
   return api_hash.to_json
-end
\ No newline at end of file
+end
diff --git a/lib/swagger.rb b/lib/swagger.rb
index f6b42b2..9fa14f7 100644
--- a/lib/swagger.rb
+++ b/lib/swagger.rb
@@ -2,7 +2,7 @@ set :public_folder, File.join("/home/ist/swagger-ui/dist/")
 # route to swagger API file
 get "/" do
   response['Content-Type'] = "text/html"
-  index_file = File.join("/home/ist/swagger-ui/dist/index.html")
-  bad_request_error "API Documentation in Swagger JSON is not implemented.", uri("/#{SERVICE}/api") unless File.exists?(index_file)
+  index_file = File.join(ENV['HOME'],"swagger-ui/dist/index.html")
+  bad_request_error "API Documentation in Swagger JSON is not implemented." unless File.exists?(index_file)
   File.read(index_file)
 end
-- 
cgit v1.2.3


From 63ca78ca7a2e60b080ae58667ebe9a4f245e409e Mon Sep 17 00:00:00 2001
From: gebele <gebele@in-silico.ch>
Date: Tue, 30 Jan 2018 14:11:56 +0000
Subject: changed input type from array to string to fix array of descriptors
 form data issue

---
 api/api.json | 9 +++------
 1 file changed, 3 insertions(+), 6 deletions(-)

diff --git a/api/api.json b/api/api.json
index 7777f1e..23dd1cc 100644
--- a/api/api.json
+++ b/api/api.json
@@ -709,7 +709,7 @@
                     "descriptor"
                 ],
                 "summary": "Descriptor calculation",
-                "description": "Calculate descriptors for a single compound as SMILES string <br>  <strong>curl example:</strong> <pre>curl -Lk -X POST -i  -H \"Accept:application/json\" -F \"identifier=O=C1NC(=O)NC=C1\" -F \"descriptor=Openbabel.MW,JoeLib.LogP\" https://api.in-silico.ch/compound/descriptor </pre>.",
+                "description": "Calculate descriptors for a single compound as SMILES string <br>  <strong>curl example:</strong> <pre>curl -Lk -X POST -i  -H \"Accept:application/json\" -F \"identifier=O=C1NC(=O)NC=C1\" -F \"descriptor=Openbabel.MW,Openbabel.atoms\" https://api.in-silico.ch/compound/descriptor </pre>.",
                 "consumes": [
                     "multipart/form-data"
                 ],
@@ -724,12 +724,9 @@
                     {
                         "name": "descriptor",
                         "in": "formData",
-                        "description": "array of descriptors",
+                        "description": "list of comma seperated descriptors",
                         "required": true,
-                        "type": "array",
-                        "items": {
-                            "type": "string"
-                        }
+                        "type": "string"
                     },
                     {
                         "$ref": "#/parameters/subjectid"
-- 
cgit v1.2.3