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authorChristoph Helma <helma@in-silico.ch>2013-04-08 17:59:31 +0200
committerChristoph Helma <helma@in-silico.ch>2013-04-08 17:59:31 +0200
commitf7e130d1729e06510b5678c251e51b5377b422e3 (patch)
tree719a33ea2ba5ab1a6c40fb34b2ec58c8b9dfbeca
parentbf5e9cb689daa7202a269f8b3f7076fad2fdf237 (diff)
debug messsages partially removed, gem depencies updated. tested with ruby 2.0.0p0
-rw-r--r--Gemfile2
-rw-r--r--lib/task.rb1
-rw-r--r--lib/validation.rb9
3 files changed, 2 insertions, 10 deletions
diff --git a/Gemfile b/Gemfile
index f98dbde..3be9c3c 100644
--- a/Gemfile
+++ b/Gemfile
@@ -1,2 +1,2 @@
-source :gemcutter
+source "https://rubygems.org"
gemspec
diff --git a/lib/task.rb b/lib/task.rb
index 07c0b05..944f20c 100644
--- a/lib/task.rb
+++ b/lib/task.rb
@@ -35,7 +35,6 @@ module OpenTox
#end
=end
if $!.respond_to? :to_ntriples
- puts $!.to_turtle
RestClientWrapper.put(File.join(task.uri,'Error'),:errorReport => $!.to_ntriples,:content_type => 'text/plain')
else
cut_index = $!.backtrace.find_index{|line| line.match /gems\/sinatra/}
diff --git a/lib/validation.rb b/lib/validation.rb
index 0a08e97..c4f6868 100644
--- a/lib/validation.rb
+++ b/lib/validation.rb
@@ -11,8 +11,6 @@ module OldOpenTox
# loads metadata via yaml
def load_metadata( subjectid=nil )
yaml = OpenTox::RestClientWrapper.get(uri,nil,{:subjectid => subjectid, :accept => "application/x-yaml"})
- #puts uri
- #puts yaml
@metadata = YAML.load(yaml)
end
@@ -261,7 +259,6 @@ module OpenTox
params[:subjectid] = subjectid
uri = RestClientWrapper.post(File.join($validation[:uri],"/report/validation"),
params, {}, waiting_task )
- puts uri
uri = wait_for_task(uri)
ValidationReport.new(uri)
end
@@ -354,12 +351,8 @@ module OpenTox
params[:validation_uris] = validation_uris.join(",")
params[:identifier] = identifier.join(",")
params[:subjectid] = subjectid
- uri = RestClientWrapper.post(File.join($validation[:uri],"/report/algorithm_comparison"),
- params, {}, waiting_task )
- puts uri
-
+ uri = RestClientWrapper.post(File.join($validation[:uri],"/report/algorithm_comparison"), params, {}, waiting_task )
uri = wait_for_task(uri)
- #AlgorithmComparisonReport.new(wait_for_task(uri))
AlgorithmComparisonReport.new(uri)
end
end