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| author | Christoph Helma <helma@in-silico.ch> | 2015-10-08 10:36:34 +0200 |
|---|---|---|
| committer | Christoph Helma <helma@in-silico.ch> | 2015-10-08 10:36:34 +0200 |
| commit | e3217075b602a950a0ee995fcfa731d97b5ba3eb (patch) | |
| tree | 3555c5883ed0c292b105c40c185ebba3e5bd4e3e | |
| parent | 6bde559981fa11ffd265af708956f9d4ee6c9a89 (diff) | |
version bump, experiment tests skipped
| -rw-r--r-- | VERSION | 2 | ||||
| -rw-r--r-- | test/compound.rb | 1 | ||||
| -rw-r--r-- | test/experiment.rb | 7 |
3 files changed, 9 insertions, 1 deletions
@@ -1 +1 @@ -0.0.8 +0.0.9 diff --git a/test/compound.rb b/test/compound.rb index 24356d3..22c152b 100644 --- a/test/compound.rb +++ b/test/compound.rb @@ -162,6 +162,7 @@ print c.sdf end def test_fingerprint_db_neighbors + skip training_dataset = Dataset.from_csv_file File.join(DATA_DIR,"EPAFHM.csv") [ "CC(=O)CC(C)C#N", diff --git a/test/experiment.rb b/test/experiment.rb index b49f349..528112d 100644 --- a/test/experiment.rb +++ b/test/experiment.rb @@ -3,6 +3,7 @@ require_relative "setup.rb" class ExperimentTest < MiniTest::Test def test_regression_experiment + skip datasets = [ "EPAFHM.medi.csv", #"EPAFHM.csv", @@ -32,6 +33,7 @@ class ExperimentTest < MiniTest::Test def test_classification_experiment + skip datasets = [ "hamster_carcinogenicity.csv" ] experiment = Experiment.create( :name => "Fminer vs fingerprint classification for datasets #{datasets}.", @@ -63,6 +65,7 @@ class ExperimentTest < MiniTest::Test end def test_regression_fingerprints + skip #=begin datasets = [ "EPAFHM.medi.csv", @@ -113,6 +116,7 @@ class ExperimentTest < MiniTest::Test end def test_mpd_fingerprints + skip datasets = [ "EPAFHM.medi.csv", ] @@ -141,6 +145,7 @@ class ExperimentTest < MiniTest::Test end def test_multiple_datasets + skip datasets = [ "EPAFHM.medi.csv", "LOAEL_mmol_corrected_smiles.csv" @@ -184,6 +189,7 @@ class ExperimentTest < MiniTest::Test end def test_mpd_mna_regression_fingerprints + skip datasets = [ "EPAFHM.medi.csv", #"hamster_carcinogenicity.csv" @@ -239,6 +245,7 @@ class ExperimentTest < MiniTest::Test end def test_mpd_mna_classification_fingerprints + skip datasets = [ #"EPAFHM.medi.csv", "hamster_carcinogenicity.csv" |