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authorChristoph Helma <helma@in-silico.ch>2016-11-11 17:19:13 +0100
committerChristoph Helma <helma@in-silico.ch>2016-11-11 17:19:13 +0100
commit99c42f76b02f9084d0757eb0c52b4a55fa295a95 (patch)
treecc878fc809858e7acd03c5d1ec5504ee0331ed05
parentb6116bc4705066da30668ff3370f3b1c307e44e7 (diff)
p-chem regression and enm import fixed
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-rw-r--r--test/data/enm/study-XLSX-f4ba2094-beba-4eb3-9a75-1d0955c3af17.json53
-rw-r--r--test/data/enm/study-XLSX-f5800c94-652b-419f-b812-9446748af04c.json53
-rw-r--r--test/data/enm/study-XLSX-f596b79d-58bd-4c59-8255-cb51aa2ffbec.json53
-rw-r--r--test/data/enm/study-XLSX-f5ba28f1-d236-415d-af07-6ffe7b15585e.json75
-rw-r--r--test/data/enm/study-XLSX-f61dd9c6-563c-40a5-8fcc-52c9f4ad7590.json53
-rw-r--r--test/data/enm/study-XLSX-f680f3e9-24d8-482c-ac04-0ee2884348a4.json53
-rw-r--r--test/data/enm/study-XLSX-f752a9e6-816d-4d83-8211-55fef5b0d24e.json53
-rw-r--r--test/data/enm/study-XLSX-f861ae7e-cfc8-4406-b8c1-2bab45c9be8f.json53
-rw-r--r--test/data/enm/study-XLSX-f9dc91ff-8f1d-4f73-962d-30cc1fe31699.json696
-rw-r--r--test/data/enm/study-XLSX-f9df1a98-6f38-473a-a70f-80dcdf8fa5be.json53
-rw-r--r--test/data/enm/study-XLSX-fa433d53-df49-4420-854a-fd59b58d39c5.json696
-rw-r--r--test/data/enm/study-XLSX-fb1ee400-bfaa-4ac1-bd6f-801e8ead9842.json75
-rw-r--r--test/data/enm/study-XLSX-fd583dba-17af-4d5d-b33b-99bc223cacb0.json53
-rw-r--r--test/data/enm/study-XLSX-fd6f9dd1-b20f-45bc-95e1-e9aa08913cd1.json75
-rw-r--r--test/data/enm/study-XLSX-fdcbf34a-59a7-4533-beab-0a38696cd639.json53
-rw-r--r--test/data/enm/study-XLSX-fe6bb3ce-f1ea-4e4f-a781-9c4b439e5887.json63
-rw-r--r--test/data/enm/study-XLSX-fe7ed13c-9071-4a3d-88b6-1b105fd5ca70.json75
-rw-r--r--test/data/enm/study-XLSX-fe85de6c-5b0e-4ea1-8eeb-72d706db95a8.json75
-rw-r--r--test/data/enm/study-XLSX-fff71a73-f25e-4783-8660-bdb3aa52cd47.json75
-rw-r--r--test/model-nanoparticle.rb5
-rw-r--r--test/model-validation.rb19
-rw-r--r--test/nanomaterial-model-validation.rb (renamed from test/nanomaterial-prediction-models.rb)34
-rw-r--r--test/prediction_models.rb19
-rw-r--r--test/validation-nanoparticle.rb5
3104 files changed, 54 insertions, 276040 deletions
diff --git a/lib/crossvalidation.rb b/lib/crossvalidation.rb
index be680ae..5a05955 100644
--- a/lib/crossvalidation.rb
+++ b/lib/crossvalidation.rb
@@ -6,6 +6,7 @@ module OpenTox
field :folds, type: Integer, default: 10
def self.create model, n=10
+ $logger.debug model.algorithms
klass = ClassificationCrossValidation if model.is_a? Model::LazarClassification
klass = RegressionCrossValidation if model.is_a? Model::LazarRegression
bad_request_error "Unknown model class #{model.class}." unless klass
diff --git a/lib/model.rb b/lib/model.rb
index 9be0fa0..9ed3210 100644
--- a/lib/model.rb
+++ b/lib/model.rb
@@ -102,6 +102,7 @@ module OpenTox
parameters.each do |p,v|
model.algorithms[type] ||= {}
model.algorithms[type][p] = v
+ model.algorithms[:descriptors].delete :categories if type == :descriptors and p == :type
end
else
model.algorithms[type] = parameters
@@ -246,7 +247,7 @@ module OpenTox
elsif neighbor_similarities.size == 1
prediction.merge!({:value => dependent_variables.first, :probabilities => nil, :warning => "Only one similar compound in the training set. Predicting its experimental value.", :neighbors => [{:id => neighbor_ids.first, :similarity => neighbor_similarities.first}]})
else
- query_descriptors.collect!{|d| d ? 1 : 0} if independent_variables[0][0].numeric?
+ query_descriptors.collect!{|d| d ? 1 : 0} if algorithms[:feature_selection] and algorithms[:descriptors][:method] == "fingerprint"
# call prediction algorithm
result = Algorithm.run algorithms[:prediction][:method], dependent_variables:neighbor_dependent_variables,independent_variables:neighbor_independent_variables ,weights:neighbor_similarities, query_variables:query_descriptors
prediction.merge! result
@@ -329,7 +330,7 @@ module OpenTox
class LazarRegression < Lazar
end
- class Prediction
+ class Validation
include OpenTox
include Mongoid::Document
@@ -377,20 +378,16 @@ module OpenTox
def self.from_csv_file file
metadata_file = file.sub(/csv$/,"json")
bad_request_error "No metadata file #{metadata_file}" unless File.exist? metadata_file
- prediction_model = self.new JSON.parse(File.read(metadata_file))
+ model_validation = self.new JSON.parse(File.read(metadata_file))
training_dataset = Dataset.from_csv_file file
model = Lazar.create training_dataset: training_dataset
- prediction_model[:model_id] = model.id
- prediction_model[:repeated_crossvalidation_id] = Validation::RepeatedCrossValidation.create(model).id
- prediction_model.save
- prediction_model
+ model_validation[:model_id] = model.id
+ model_validation[:repeated_crossvalidation_id] = Validation::RepeatedCrossValidation.create(model).id
+ model_validation.save
+ model_validation
end
- end
-
- class NanoPrediction < Prediction
-
- def self.create training_dataset: nil, prediction_feature:nil, algorithms: nil
+ def self.from_enanomapper training_dataset: nil, prediction_feature:nil, algorithms: nil
# find/import training_dataset
training_dataset ||= Dataset.where(:name => "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles").first
@@ -401,18 +398,18 @@ module OpenTox
end
prediction_feature ||= Feature.where(name: "log2(Net cell association)", category: "TOX").first
- prediction_model = self.new(
+ model_validation = self.new(
:endpoint => prediction_feature.name,
:source => prediction_feature.source,
:species => "A549 human lung epithelial carcinoma cells",
:unit => prediction_feature.unit
)
model = Model::LazarRegression.create(prediction_feature: prediction_feature, training_dataset: training_dataset, algorithms: algorithms)
- prediction_model[:model_id] = model.id
+ model_validation[:model_id] = model.id
repeated_cv = Validation::RepeatedCrossValidation.create model
- prediction_model[:repeated_crossvalidation_id] = repeated_cv.id
- prediction_model.save
- prediction_model
+ model_validation[:repeated_crossvalidation_id] = repeated_cv.id
+ model_validation.save
+ model_validation
end
end
diff --git a/test/data/enm/bundles.json b/test/data/enm/bundles.json
deleted file mode 100644
index 54958d5..0000000
--- a/test/data/enm/bundles.json
+++ /dev/null
@@ -1,263 +0,0 @@
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- "rightsHolder": "http://echa.europa.eu/",
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- },
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- "number": "00000000-0000-0000-0000-000000000002",
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- "owner": "enanomapper",
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- },
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diff --git a/test/data/enm/nanoparticle-FCSV-0542c513-7015-3169-a1c1-e00f811a7ba0.json b/test/data/enm/nanoparticle-FCSV-0542c513-7015-3169-a1c1-e00f811a7ba0.json
deleted file mode 100644
index ef2cb79..0000000
--- a/test/data/enm/nanoparticle-FCSV-0542c513-7015-3169-a1c1-e00f811a7ba0.json
+++ /dev/null
@@ -1,299 +0,0 @@
-{
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- },
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- "https://data.enanomapper.net/identifier/tradename": "G30.NT@F127",
- "https://data.enanomapper.net/identifier/uuid": "FCSV-0542c513-7015-3169-a1c1-e00f811a7ba0",
- "https://data.enanomapper.net/owner/name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
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- {
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- }
- ],
- "https://data.enanomapper.net/property/P-CHEM/CRYSTALLITE_AND_GRAIN_SIZE_SECTION/Polydispersity+index/9D35A889AFDA68DE234F2EE9A61A06CC91BF7437/E/3ed642f9-1b42-387a-9966-dea5b91e5f8a": [
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- ],
- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/Core+size/1918C28E0E397464AA8E0C414DA2C75DAE2BA64B/E/3ed642f9-1b42-387a-9966-dea5b91e5f8a": [
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- "loValue": 31.6
- }
- ],
- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/Density/15665B7D041A4D573178F909094A9D067E79EE81/E/3ed642f9-1b42-387a-9966-dea5b91e5f8a": [
- {
- "loValue": 19.1
- }
- ],
- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/MW/48C41DC3AC6E2D7E62C400216AA4E17DFC9AF68D/E/3ed642f9-1b42-387a-9966-dea5b91e5f8a": [
- {
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- }
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- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/Mol%2FNP/F9215F417F7AF3E303D6AF553AD6D74973E04971/E/3ed642f9-1b42-387a-9966-dea5b91e5f8a": [
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diff --git a/test/data/enm/nanoparticle-FCSV-0588dd9b-6227-307f-9e6a-6b07d4717e8c.json b/test/data/enm/nanoparticle-FCSV-0588dd9b-6227-307f-9e6a-6b07d4717e8c.json
deleted file mode 100644
index f275b8b..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-05f4c488-5326-3d8a-be41-c57c468b2fa4.json b/test/data/enm/nanoparticle-FCSV-05f4c488-5326-3d8a-be41-c57c468b2fa4.json
deleted file mode 100644
index 75e7278..0000000
--- a/test/data/enm/nanoparticle-FCSV-05f4c488-5326-3d8a-be41-c57c468b2fa4.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-064f1803-3b9e-3f44-a5f6-60b1f573830c.json b/test/data/enm/nanoparticle-FCSV-064f1803-3b9e-3f44-a5f6-60b1f573830c.json
deleted file mode 100644
index 29b4b28..0000000
--- a/test/data/enm/nanoparticle-FCSV-064f1803-3b9e-3f44-a5f6-60b1f573830c.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-07629748-9b8e-381b-a4e6-79b495404e02.json b/test/data/enm/nanoparticle-FCSV-07629748-9b8e-381b-a4e6-79b495404e02.json
deleted file mode 100644
index 6d161d3..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-07ecc16e-528e-3904-bb96-0812dff8ea65.json b/test/data/enm/nanoparticle-FCSV-07ecc16e-528e-3904-bb96-0812dff8ea65.json
deleted file mode 100644
index 31a09e3..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-0d5c0fc7-de56-3507-b651-1c91bf030465.json b/test/data/enm/nanoparticle-FCSV-0d5c0fc7-de56-3507-b651-1c91bf030465.json
deleted file mode 100644
index c91e3ca..0000000
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deleted file mode 100644
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diff --git a/test/data/enm/nanoparticle-FCSV-130b04ab-86e6-38d6-9276-e2db1b4dcffb.json b/test/data/enm/nanoparticle-FCSV-130b04ab-86e6-38d6-9276-e2db1b4dcffb.json
deleted file mode 100644
index 1516122..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-1a71d2b3-8121-3790-a66b-774b12829bb3.json b/test/data/enm/nanoparticle-FCSV-1a71d2b3-8121-3790-a66b-774b12829bb3.json
deleted file mode 100644
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deleted file mode 100644
index 95a08dd..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-1f4a28c8-ecc6-342f-8cbf-1ed579dd34f4.json b/test/data/enm/nanoparticle-FCSV-1f4a28c8-ecc6-342f-8cbf-1ed579dd34f4.json
deleted file mode 100644
index 1635dbf..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-2b9a077f-bef3-3ffd-a83a-77dd85db129a.json b/test/data/enm/nanoparticle-FCSV-2b9a077f-bef3-3ffd-a83a-77dd85db129a.json
deleted file mode 100644
index 3260261..0000000
--- a/test/data/enm/nanoparticle-FCSV-2b9a077f-bef3-3ffd-a83a-77dd85db129a.json
+++ /dev/null
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index 0573d10..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-2ed7ebf8-d11d-3f39-8f05-b0132ec4d7e0.json b/test/data/enm/nanoparticle-FCSV-2ed7ebf8-d11d-3f39-8f05-b0132ec4d7e0.json
deleted file mode 100644
index 0ae30be..0000000
--- a/test/data/enm/nanoparticle-FCSV-2ed7ebf8-d11d-3f39-8f05-b0132ec4d7e0.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-31bd6c7b-3247-3db9-93b6-59e0d3ecefa9.json b/test/data/enm/nanoparticle-FCSV-31bd6c7b-3247-3db9-93b6-59e0d3ecefa9.json
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diff --git a/test/data/enm/nanoparticle-FCSV-3adf8c83-83b1-3ffa-8868-b8527d83923b.json b/test/data/enm/nanoparticle-FCSV-3adf8c83-83b1-3ffa-8868-b8527d83923b.json
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index 979b0db..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-3c5fb4b0-2e4e-3dae-9eb2-1dbfd202cd13.json b/test/data/enm/nanoparticle-FCSV-3c5fb4b0-2e4e-3dae-9eb2-1dbfd202cd13.json
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diff --git a/test/data/enm/nanoparticle-FCSV-4026a85b-f254-3d35-bd77-c634d38e4a22.json b/test/data/enm/nanoparticle-FCSV-4026a85b-f254-3d35-bd77-c634d38e4a22.json
deleted file mode 100644
index 0c0dd17..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-43f0ea59-aa2f-31d8-8d87-19c95ec9be18.json b/test/data/enm/nanoparticle-FCSV-43f0ea59-aa2f-31d8-8d87-19c95ec9be18.json
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index 3ca5995..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-45779e93-a25d-39cc-9294-afc0b59f3cd6.json b/test/data/enm/nanoparticle-FCSV-45779e93-a25d-39cc-9294-afc0b59f3cd6.json
deleted file mode 100644
index de4fb1d..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-47e98c51-7508-362f-84d3-494bb124b849.json b/test/data/enm/nanoparticle-FCSV-47e98c51-7508-362f-84d3-494bb124b849.json
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index 04976bc..0000000
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deleted file mode 100644
index 53bc90e..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-4dd1bf89-e885-3128-abe2-9a87fbbd0242.json b/test/data/enm/nanoparticle-FCSV-4dd1bf89-e885-3128-abe2-9a87fbbd0242.json
deleted file mode 100644
index 1fadb35..0000000
--- a/test/data/enm/nanoparticle-FCSV-4dd1bf89-e885-3128-abe2-9a87fbbd0242.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-50aee86c-a3a2-3c46-86bf-5ac25485fc13.json b/test/data/enm/nanoparticle-FCSV-50aee86c-a3a2-3c46-86bf-5ac25485fc13.json
deleted file mode 100644
index f8715c5..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-5b29295c-f2ab-3e5a-bb32-37caac38b002.json b/test/data/enm/nanoparticle-FCSV-5b29295c-f2ab-3e5a-bb32-37caac38b002.json
deleted file mode 100644
index ed9184e..0000000
--- a/test/data/enm/nanoparticle-FCSV-5b29295c-f2ab-3e5a-bb32-37caac38b002.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-5c14595c-0e23-3f37-aaad-9988eba09196.json b/test/data/enm/nanoparticle-FCSV-5c14595c-0e23-3f37-aaad-9988eba09196.json
deleted file mode 100644
index 035bdc7..0000000
--- a/test/data/enm/nanoparticle-FCSV-5c14595c-0e23-3f37-aaad-9988eba09196.json
+++ /dev/null
@@ -1,247 +0,0 @@
-{
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index 5641c39..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-62d68a47-f27e-3d76-a7cf-5cacae221ec7.json b/test/data/enm/nanoparticle-FCSV-62d68a47-f27e-3d76-a7cf-5cacae221ec7.json
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index 0e4ad37..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-63da0f0e-51b8-3c56-b5d3-d4e0e9fb06a6.json b/test/data/enm/nanoparticle-FCSV-63da0f0e-51b8-3c56-b5d3-d4e0e9fb06a6.json
deleted file mode 100644
index 7de320b..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-6405ef25-683e-3763-a4e3-f56eb93174e4.json b/test/data/enm/nanoparticle-FCSV-6405ef25-683e-3763-a4e3-f56eb93174e4.json
deleted file mode 100644
index be8a66c..0000000
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+++ /dev/null
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index 52543d7..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-6b15ab65-c2d3-3e58-ac04-18d8e1d45a7a.json b/test/data/enm/nanoparticle-FCSV-6b15ab65-c2d3-3e58-ac04-18d8e1d45a7a.json
deleted file mode 100644
index 6faa1b4..0000000
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index c1144e2..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-6ed95128-c2b8-3cfe-a0b4-29d2b06c6bc6.json b/test/data/enm/nanoparticle-FCSV-6ed95128-c2b8-3cfe-a0b4-29d2b06c6bc6.json
deleted file mode 100644
index 42fb21e..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-70406142-0fd6-30bd-873b-5cce39016ed5.json b/test/data/enm/nanoparticle-FCSV-70406142-0fd6-30bd-873b-5cce39016ed5.json
deleted file mode 100644
index fe8b9e8..0000000
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deleted file mode 100644
index 4acca25..0000000
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index 492ceb9..0000000
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deleted file mode 100644
index 222cb1b..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-80a36fc5-9a73-358c-829b-2e69eea82125.json b/test/data/enm/nanoparticle-FCSV-80a36fc5-9a73-358c-829b-2e69eea82125.json
deleted file mode 100644
index c70f0c8..0000000
--- a/test/data/enm/nanoparticle-FCSV-80a36fc5-9a73-358c-829b-2e69eea82125.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-815715e8-0cc8-3641-897c-4530d961cfe0.json b/test/data/enm/nanoparticle-FCSV-815715e8-0cc8-3641-897c-4530d961cfe0.json
deleted file mode 100644
index b313283..0000000
--- a/test/data/enm/nanoparticle-FCSV-815715e8-0cc8-3641-897c-4530d961cfe0.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-8619e6db-2c01-389e-b05b-e75273d18359.json b/test/data/enm/nanoparticle-FCSV-8619e6db-2c01-389e-b05b-e75273d18359.json
deleted file mode 100644
index 841fffd..0000000
--- a/test/data/enm/nanoparticle-FCSV-8619e6db-2c01-389e-b05b-e75273d18359.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-8a45dec8-a551-33cc-a7ac-7750d9f30389.json b/test/data/enm/nanoparticle-FCSV-8a45dec8-a551-33cc-a7ac-7750d9f30389.json
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index cc69836..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-8b5b62c3-7fd2-3bba-b293-b7537e4971b1.json b/test/data/enm/nanoparticle-FCSV-8b5b62c3-7fd2-3bba-b293-b7537e4971b1.json
deleted file mode 100644
index c029bb9..0000000
--- a/test/data/enm/nanoparticle-FCSV-8b5b62c3-7fd2-3bba-b293-b7537e4971b1.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-8e1a76df-a12d-3254-ae6b-28e20153ef59.json b/test/data/enm/nanoparticle-FCSV-8e1a76df-a12d-3254-ae6b-28e20153ef59.json
deleted file mode 100644
index 3b84459..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-8f0e4035-24d4-3a81-b20b-bd156f210616.json b/test/data/enm/nanoparticle-FCSV-8f0e4035-24d4-3a81-b20b-bd156f210616.json
deleted file mode 100644
index 6b3a01e..0000000
--- a/test/data/enm/nanoparticle-FCSV-8f0e4035-24d4-3a81-b20b-bd156f210616.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-8f5cd32a-3350-300b-91d0-87000ee5d7ee.json b/test/data/enm/nanoparticle-FCSV-8f5cd32a-3350-300b-91d0-87000ee5d7ee.json
deleted file mode 100644
index 5d3a292..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-8f5e6fcb-23b9-3222-aa6e-4afcbba47715.json b/test/data/enm/nanoparticle-FCSV-8f5e6fcb-23b9-3222-aa6e-4afcbba47715.json
deleted file mode 100644
index faa9821..0000000
--- a/test/data/enm/nanoparticle-FCSV-8f5e6fcb-23b9-3222-aa6e-4afcbba47715.json
+++ /dev/null
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index c41d353..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-924a51b9-97d3-31fb-b289-52688d9d0d3c.json b/test/data/enm/nanoparticle-FCSV-924a51b9-97d3-31fb-b289-52688d9d0d3c.json
deleted file mode 100644
index 593808b..0000000
--- a/test/data/enm/nanoparticle-FCSV-924a51b9-97d3-31fb-b289-52688d9d0d3c.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-93c29ebf-e80e-354c-893f-923385c72858.json b/test/data/enm/nanoparticle-FCSV-93c29ebf-e80e-354c-893f-923385c72858.json
deleted file mode 100644
index d070e0c..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-9964d099-d8aa-3a89-863c-d69fc921bee2.json b/test/data/enm/nanoparticle-FCSV-9964d099-d8aa-3a89-863c-d69fc921bee2.json
deleted file mode 100644
index e7ae52c..0000000
--- a/test/data/enm/nanoparticle-FCSV-9964d099-d8aa-3a89-863c-d69fc921bee2.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-99734121-3347-3d4e-9bc6-67956450b140.json b/test/data/enm/nanoparticle-FCSV-99734121-3347-3d4e-9bc6-67956450b140.json
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index f992881..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-9a56b1e5-2e22-31c4-b979-e8e9fee728c6.json b/test/data/enm/nanoparticle-FCSV-9a56b1e5-2e22-31c4-b979-e8e9fee728c6.json
deleted file mode 100644
index 3775688..0000000
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index de9172d..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-9bf04ec0-f6b6-30a6-8970-19a51968532e.json b/test/data/enm/nanoparticle-FCSV-9bf04ec0-f6b6-30a6-8970-19a51968532e.json
deleted file mode 100644
index f0b2df0..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-9cc7dd73-d27f-35a0-a3f1-81a18429b76a.json b/test/data/enm/nanoparticle-FCSV-9cc7dd73-d27f-35a0-a3f1-81a18429b76a.json
deleted file mode 100644
index ab4cf77..0000000
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deleted file mode 100644
index adb35da..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-9e599ca9-9a8f-3094-a97b-3fb35b08a82a.json b/test/data/enm/nanoparticle-FCSV-9e599ca9-9a8f-3094-a97b-3fb35b08a82a.json
deleted file mode 100644
index 1737a4b..0000000
--- a/test/data/enm/nanoparticle-FCSV-9e599ca9-9a8f-3094-a97b-3fb35b08a82a.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-a153cba3-a82d-3e3c-bcbd-335cc5155f44.json b/test/data/enm/nanoparticle-FCSV-a153cba3-a82d-3e3c-bcbd-335cc5155f44.json
deleted file mode 100644
index 3272d29..0000000
--- a/test/data/enm/nanoparticle-FCSV-a153cba3-a82d-3e3c-bcbd-335cc5155f44.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-a3c8dce5-07ab-3ca6-91a0-84072fc24aed.json b/test/data/enm/nanoparticle-FCSV-a3c8dce5-07ab-3ca6-91a0-84072fc24aed.json
deleted file mode 100644
index 908b6be..0000000
--- a/test/data/enm/nanoparticle-FCSV-a3c8dce5-07ab-3ca6-91a0-84072fc24aed.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-a4df7f03-50e1-387c-b0b7-2ce62ed03a8c.json b/test/data/enm/nanoparticle-FCSV-a4df7f03-50e1-387c-b0b7-2ce62ed03a8c.json
deleted file mode 100644
index 00ca48a..0000000
--- a/test/data/enm/nanoparticle-FCSV-a4df7f03-50e1-387c-b0b7-2ce62ed03a8c.json
+++ /dev/null
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deleted file mode 100644
index 5d229d6..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-aab0ef77-8a71-36d7-9185-d2f76b9e3567.json b/test/data/enm/nanoparticle-FCSV-aab0ef77-8a71-36d7-9185-d2f76b9e3567.json
deleted file mode 100644
index 97e6232..0000000
--- a/test/data/enm/nanoparticle-FCSV-aab0ef77-8a71-36d7-9185-d2f76b9e3567.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-acbbde2e-0238-3d4c-a2f4-7629ad478e6a.json b/test/data/enm/nanoparticle-FCSV-acbbde2e-0238-3d4c-a2f4-7629ad478e6a.json
deleted file mode 100644
index 31f1b31..0000000
--- a/test/data/enm/nanoparticle-FCSV-acbbde2e-0238-3d4c-a2f4-7629ad478e6a.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-b228fc7b-c407-368a-bc1c-359c7375bb9b.json b/test/data/enm/nanoparticle-FCSV-b228fc7b-c407-368a-bc1c-359c7375bb9b.json
deleted file mode 100644
index f6f6a48..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-bc77c03d-4e75-3fab-bb3d-17b983663819.json b/test/data/enm/nanoparticle-FCSV-bc77c03d-4e75-3fab-bb3d-17b983663819.json
deleted file mode 100644
index e5cb15a..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-bdd4c371-ffec-34f1-ae5b-2c60d243e867.json b/test/data/enm/nanoparticle-FCSV-bdd4c371-ffec-34f1-ae5b-2c60d243e867.json
deleted file mode 100644
index d430cc1..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-c2bce3a6-e09a-3fdc-a1f5-2281b22bb892.json b/test/data/enm/nanoparticle-FCSV-c2bce3a6-e09a-3fdc-a1f5-2281b22bb892.json
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index cda5f6f..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-c975883b-640e-38a6-aabe-7596e3abcd95.json b/test/data/enm/nanoparticle-FCSV-c975883b-640e-38a6-aabe-7596e3abcd95.json
deleted file mode 100644
index dee8ebe..0000000
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+++ /dev/null
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index 60e6cc3..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-d1731b11-29a7-3b39-bf48-000a31d9c46b.json b/test/data/enm/nanoparticle-FCSV-d1731b11-29a7-3b39-bf48-000a31d9c46b.json
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diff --git a/test/data/enm/nanoparticle-FCSV-d63a1ea0-3194-3019-a9e0-0960e63b5819.json b/test/data/enm/nanoparticle-FCSV-d63a1ea0-3194-3019-a9e0-0960e63b5819.json
deleted file mode 100644
index 7cfc022..0000000
--- a/test/data/enm/nanoparticle-FCSV-d63a1ea0-3194-3019-a9e0-0960e63b5819.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-d677545a-5079-3793-8990-4061a6b254c5.json b/test/data/enm/nanoparticle-FCSV-d677545a-5079-3793-8990-4061a6b254c5.json
deleted file mode 100644
index 0b5503b..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-d6c56b3e-71a2-330b-92b6-9c90e6046eaa.json b/test/data/enm/nanoparticle-FCSV-d6c56b3e-71a2-330b-92b6-9c90e6046eaa.json
deleted file mode 100644
index 4901646..0000000
--- a/test/data/enm/nanoparticle-FCSV-d6c56b3e-71a2-330b-92b6-9c90e6046eaa.json
+++ /dev/null
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deleted file mode 100644
index 146b696..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-e4b9ce55-bbeb-368b-a1d4-e591b7df742e.json b/test/data/enm/nanoparticle-FCSV-e4b9ce55-bbeb-368b-a1d4-e591b7df742e.json
deleted file mode 100644
index 2ba52e1..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-e5b47d9a-ba9d-3310-8f92-72aad8f0364d.json b/test/data/enm/nanoparticle-FCSV-e5b47d9a-ba9d-3310-8f92-72aad8f0364d.json
deleted file mode 100644
index ba325ad..0000000
--- a/test/data/enm/nanoparticle-FCSV-e5b47d9a-ba9d-3310-8f92-72aad8f0364d.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-ed95bb69-9fa7-3a4a-b4a4-32dd947d4d1a.json b/test/data/enm/nanoparticle-FCSV-ed95bb69-9fa7-3a4a-b4a4-32dd947d4d1a.json
deleted file mode 100644
index b26df79..0000000
--- a/test/data/enm/nanoparticle-FCSV-ed95bb69-9fa7-3a4a-b4a4-32dd947d4d1a.json
+++ /dev/null
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deleted file mode 100644
index 8a63e54..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-ee07f574-0b80-31db-b1f2-535f6d6626b0.json b/test/data/enm/nanoparticle-FCSV-ee07f574-0b80-31db-b1f2-535f6d6626b0.json
deleted file mode 100644
index 872ed73..0000000
--- a/test/data/enm/nanoparticle-FCSV-ee07f574-0b80-31db-b1f2-535f6d6626b0.json
+++ /dev/null
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-ef28f16c-6ab1-3d8b-b971-37c08688701f.json b/test/data/enm/nanoparticle-FCSV-ef28f16c-6ab1-3d8b-b971-37c08688701f.json
deleted file mode 100644
index ee76227..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-f0cbcba3-1cb5-3fa5-82cc-bfd9d1afa21d.json b/test/data/enm/nanoparticle-FCSV-f0cbcba3-1cb5-3fa5-82cc-bfd9d1afa21d.json
deleted file mode 100644
index ab32de6..0000000
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deleted file mode 100644
index 3ce68ef..0000000
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diff --git a/test/data/enm/nanoparticle-FCSV-fb5e6048-8ee1-351d-915b-d1669681357e.json b/test/data/enm/nanoparticle-FCSV-fb5e6048-8ee1-351d-915b-d1669681357e.json
deleted file mode 100644
index 0129f1d..0000000
--- a/test/data/enm/nanoparticle-FCSV-fb5e6048-8ee1-351d-915b-d1669681357e.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-FCSV-ffe19c9e-b1a1-3f38-a149-0d587fc5b172.json b/test/data/enm/nanoparticle-FCSV-ffe19c9e-b1a1-3f38-a149-0d587fc5b172.json
deleted file mode 100644
index 9f443c0..0000000
--- a/test/data/enm/nanoparticle-FCSV-ffe19c9e-b1a1-3f38-a149-0d587fc5b172.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-IUC5-5f313d1f-4129-499c-abbe-ac18642e2471.json b/test/data/enm/nanoparticle-IUC5-5f313d1f-4129-499c-abbe-ac18642e2471.json
deleted file mode 100644
index 2349ba1..0000000
--- a/test/data/enm/nanoparticle-IUC5-5f313d1f-4129-499c-abbe-ac18642e2471.json
+++ /dev/null
@@ -1,101 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-002f5129-d46a-39c7-8f26-5626aec2174e.json b/test/data/enm/nanoparticle-NWKI-002f5129-d46a-39c7-8f26-5626aec2174e.json
deleted file mode 100644
index 06e8738..0000000
--- a/test/data/enm/nanoparticle-NWKI-002f5129-d46a-39c7-8f26-5626aec2174e.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-00e60625-914f-38d4-9765-c8497e9be3f6.json b/test/data/enm/nanoparticle-NWKI-00e60625-914f-38d4-9765-c8497e9be3f6.json
deleted file mode 100644
index a2f3577..0000000
--- a/test/data/enm/nanoparticle-NWKI-00e60625-914f-38d4-9765-c8497e9be3f6.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-02981dd4-b7d0-34c8-a0ab-dd19a5a40865.json b/test/data/enm/nanoparticle-NWKI-02981dd4-b7d0-34c8-a0ab-dd19a5a40865.json
deleted file mode 100644
index 4c645f2..0000000
--- a/test/data/enm/nanoparticle-NWKI-02981dd4-b7d0-34c8-a0ab-dd19a5a40865.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-034e18ec-3dd3-3806-86d6-2580247e1c14.json b/test/data/enm/nanoparticle-NWKI-034e18ec-3dd3-3806-86d6-2580247e1c14.json
deleted file mode 100644
index 29f3876..0000000
--- a/test/data/enm/nanoparticle-NWKI-034e18ec-3dd3-3806-86d6-2580247e1c14.json
+++ /dev/null
@@ -1,26 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-0455b6e1-5203-37bb-a98b-20460acceda1.json b/test/data/enm/nanoparticle-NWKI-0455b6e1-5203-37bb-a98b-20460acceda1.json
deleted file mode 100644
index fe73a8e..0000000
--- a/test/data/enm/nanoparticle-NWKI-0455b6e1-5203-37bb-a98b-20460acceda1.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-04887adf-9687-3699-8054-e7e3f695e6db.json b/test/data/enm/nanoparticle-NWKI-04887adf-9687-3699-8054-e7e3f695e6db.json
deleted file mode 100644
index de32a2e..0000000
--- a/test/data/enm/nanoparticle-NWKI-04887adf-9687-3699-8054-e7e3f695e6db.json
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diff --git a/test/data/enm/nanoparticle-NWKI-0494174f-9fc2-3296-8ffb-4fadaceb0348.json b/test/data/enm/nanoparticle-NWKI-0494174f-9fc2-3296-8ffb-4fadaceb0348.json
deleted file mode 100644
index cf9523c..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-04962f10-34c8-3118-953e-d40d7244209c.json b/test/data/enm/nanoparticle-NWKI-04962f10-34c8-3118-953e-d40d7244209c.json
deleted file mode 100644
index 7a21397..0000000
--- a/test/data/enm/nanoparticle-NWKI-04962f10-34c8-3118-953e-d40d7244209c.json
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diff --git a/test/data/enm/nanoparticle-NWKI-04d6ccd0-30ad-3ffc-9f06-8b13709d3a62.json b/test/data/enm/nanoparticle-NWKI-04d6ccd0-30ad-3ffc-9f06-8b13709d3a62.json
deleted file mode 100644
index cc1eec5..0000000
--- a/test/data/enm/nanoparticle-NWKI-04d6ccd0-30ad-3ffc-9f06-8b13709d3a62.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-050d8278-eca3-32fa-8509-9a6b5db284a4.json b/test/data/enm/nanoparticle-NWKI-050d8278-eca3-32fa-8509-9a6b5db284a4.json
deleted file mode 100644
index 557d3cd..0000000
--- a/test/data/enm/nanoparticle-NWKI-050d8278-eca3-32fa-8509-9a6b5db284a4.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-05ce8604-4efc-376b-a88f-338a90465243.json b/test/data/enm/nanoparticle-NWKI-05ce8604-4efc-376b-a88f-338a90465243.json
deleted file mode 100644
index cfd7454..0000000
--- a/test/data/enm/nanoparticle-NWKI-05ce8604-4efc-376b-a88f-338a90465243.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-067e7c71-b439-3945-bc95-46b28278132d.json b/test/data/enm/nanoparticle-NWKI-067e7c71-b439-3945-bc95-46b28278132d.json
deleted file mode 100644
index a634cd1..0000000
--- a/test/data/enm/nanoparticle-NWKI-067e7c71-b439-3945-bc95-46b28278132d.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-072b1631-f6f1-3f47-a4dc-723aa4eb0700.json b/test/data/enm/nanoparticle-NWKI-072b1631-f6f1-3f47-a4dc-723aa4eb0700.json
deleted file mode 100644
index 877b9f0..0000000
--- a/test/data/enm/nanoparticle-NWKI-072b1631-f6f1-3f47-a4dc-723aa4eb0700.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-0866f605-4cfb-32a2-a704-2cf2a8d3d9a6.json b/test/data/enm/nanoparticle-NWKI-0866f605-4cfb-32a2-a704-2cf2a8d3d9a6.json
deleted file mode 100644
index 2d06b95..0000000
--- a/test/data/enm/nanoparticle-NWKI-0866f605-4cfb-32a2-a704-2cf2a8d3d9a6.json
+++ /dev/null
@@ -1,95 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-08b685e5-70fa-39b5-87ad-092df4a60568.json b/test/data/enm/nanoparticle-NWKI-08b685e5-70fa-39b5-87ad-092df4a60568.json
deleted file mode 100644
index b1e9105..0000000
--- a/test/data/enm/nanoparticle-NWKI-08b685e5-70fa-39b5-87ad-092df4a60568.json
+++ /dev/null
@@ -1,84 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-09e3ff87-f9a0-34dc-955e-e8b8474fb12b.json b/test/data/enm/nanoparticle-NWKI-09e3ff87-f9a0-34dc-955e-e8b8474fb12b.json
deleted file mode 100644
index c74f261..0000000
--- a/test/data/enm/nanoparticle-NWKI-09e3ff87-f9a0-34dc-955e-e8b8474fb12b.json
+++ /dev/null
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deleted file mode 100644
index ea78030..0000000
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deleted file mode 100644
index 9d8533a..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-0b16e14c-47ab-3075-afc4-0713d06aa54c.json b/test/data/enm/nanoparticle-NWKI-0b16e14c-47ab-3075-afc4-0713d06aa54c.json
deleted file mode 100644
index fb8856c..0000000
--- a/test/data/enm/nanoparticle-NWKI-0b16e14c-47ab-3075-afc4-0713d06aa54c.json
+++ /dev/null
@@ -1,88 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-0b663f5f-1386-3cc5-ba6b-9ff2bb39d4ff.json b/test/data/enm/nanoparticle-NWKI-0b663f5f-1386-3cc5-ba6b-9ff2bb39d4ff.json
deleted file mode 100644
index 5ff086a..0000000
--- a/test/data/enm/nanoparticle-NWKI-0b663f5f-1386-3cc5-ba6b-9ff2bb39d4ff.json
+++ /dev/null
@@ -1,78 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-0bb16a46-44a8-353e-ba07-b5835e323537.json b/test/data/enm/nanoparticle-NWKI-0bb16a46-44a8-353e-ba07-b5835e323537.json
deleted file mode 100644
index 3b8a785..0000000
--- a/test/data/enm/nanoparticle-NWKI-0bb16a46-44a8-353e-ba07-b5835e323537.json
+++ /dev/null
@@ -1,82 +0,0 @@
-{
- "compound": {
- "URI": "https://data.enanomapper.net/substance/NWKI-0bb16a46-44a8-353e-ba07-b5835e323537",
- "structype": "NA",
- "metric": null,
- "name": "",
- "cas": "",
- "einecs": ""
- },
- "values": {
- "https://data.enanomapper.net/identifier/name": "CoCr (micro)",
- "https://data.enanomapper.net/identifier/tradename": "Bhabra2009 M2",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-0bb16a46-44a8-353e-ba07-b5835e323537",
- "https://data.enanomapper.net/owner/name": "NanoWiki",
- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/PARTICLE+SIZE/1BA3811ABDEA06BCCDBE29D2BBF8289121658065/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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- "composition": [
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- "URI": "https://data.enanomapper.net/substance/NWKI-0bb16a46-44a8-353e-ba07-b5835e323537"
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- "component": {
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- "structype": "NA",
- "metric": null,
- "name": "",
- "cas": "",
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- "values": {
- "https://data.enanomapper.net/identifier/uuid": "NWKI-4f22496d-4c2b-3b69-bd5a-39b944f19b5b",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23IUCLID5_UUIDDefault": "NWKI-4f22496d-4c2b-3b69-bd5a-39b944f19b5b",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23ChemicalNameDefault": "CoCr"
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- "remarks": "NanoWiki"
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- "compositionUUID": "NWKI-0bb16a46-44a8-353e-ba07-b5835e323537",
- "compositionName": null,
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diff --git a/test/data/enm/nanoparticle-NWKI-0c262415-61c3-3039-9c95-b5026385ff77.json b/test/data/enm/nanoparticle-NWKI-0c262415-61c3-3039-9c95-b5026385ff77.json
deleted file mode 100644
index 6219f74..0000000
--- a/test/data/enm/nanoparticle-NWKI-0c262415-61c3-3039-9c95-b5026385ff77.json
+++ /dev/null
@@ -1,26 +0,0 @@
-{
- "compound": {
- "URI": "https://data.enanomapper.net/substance/NWKI-0c262415-61c3-3039-9c95-b5026385ff77",
- "structype": "NA",
- "metric": null,
- "name": "",
- "cas": "",
- "einecs": ""
- },
- "values": {
- "https://data.enanomapper.net/identifier/name": "NM-211",
- "https://data.enanomapper.net/identifier/tradename": "JRCNM02101a",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-0c262415-61c3-3039-9c95-b5026385ff77",
- "https://data.enanomapper.net/owner/name": "NanoWiki"
- },
- "facets": [
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- ],
- "bundles": {
- "https://data.enanomapper.net/bundle/6": {
- "count": 1,
- "tag": null,
- "remarks": null
- }
- }
-}
diff --git a/test/data/enm/nanoparticle-NWKI-0d6f156a-6ce8-3bac-97e3-b5d62ded7f4e.json b/test/data/enm/nanoparticle-NWKI-0d6f156a-6ce8-3bac-97e3-b5d62ded7f4e.json
deleted file mode 100644
index 64a11c5..0000000
--- a/test/data/enm/nanoparticle-NWKI-0d6f156a-6ce8-3bac-97e3-b5d62ded7f4e.json
+++ /dev/null
@@ -1,143 +0,0 @@
-{
- "compound": {
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- "structype": "NA",
- "metric": null,
- "name": "",
- "cas": "",
- "einecs": ""
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- "values": {
- "https://data.enanomapper.net/identifier/name": "Ag",
- "https://data.enanomapper.net/identifier/tradename": "Harper2011 1",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-0d6f156a-6ce8-3bac-97e3-b5d62ded7f4e",
- "https://data.enanomapper.net/owner/name": "NanoWiki",
- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/PARTICLE+SIZE/1BA3811ABDEA06BCCDBE29D2BBF8289121658065/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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- "https://data.enanomapper.net/property/P-CHEM/SURFACE_CHEMISTRY_SECTION/ATOMIC+COMPOSITION/34B336573C015AF89068B6685256FD68F1DF39B4/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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- "https://data.enanomapper.net/property/P-CHEM/SURFACE_CHEMISTRY_SECTION/ATOMIC+COMPOSITION/941BB563DEDE883E58D61DFD3B8EE11D3BDE4CEE/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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- "composition": [
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- "component": {
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- "metric": null,
- "name": "",
- "cas": "",
- "einecs": ""
- },
- "values": {
- "https://data.enanomapper.net/identifier/uuid": "NWKI-13dd5366-ed5f-3098-b6f5-81b7b8f24a1f",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23IUCLID5_UUIDDefault": "NWKI-13dd5366-ed5f-3098-b6f5-81b7b8f24a1f",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23ChemicalNameDefault": "Ag",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23CASRNDefault": "7440-22-4"
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- "remarks": "NanoWiki"
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- "compositionUUID": "NWKI-0d6f156a-6ce8-3bac-97e3-b5d62ded7f4e",
- "compositionName": null,
- "relation": "HAS_CORE",
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- "function_as_additive": null
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- "hidden": false
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- {
- "substance": {
- "URI": "https://data.enanomapper.net/substance/NWKI-0d6f156a-6ce8-3bac-97e3-b5d62ded7f4e"
- },
- "component": {
- "compound": {
- "URI": "https://data.enanomapper.net/compound/130",
- "structype": "NA",
- "metric": null,
- "name": "",
- "cas": "",
- "einecs": ""
- },
- "values": {
- "https://data.enanomapper.net/identifier/uuid": "NWKI-51f19337-1269-3d2d-8273-6b7fbb681cc7",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23IUCLID5_UUIDDefault": "NWKI-51f19337-1269-3d2d-8273-6b7fbb681cc7",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23ChemicalNameDefault": "MEEE",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23TradeNameDefault": "MEEECoating"
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- "remarks": "NanoWiki"
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- "compositionUUID": "NWKI-0d6f156a-6ce8-3bac-97e3-b5d62ded7f4e",
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- "relation": "HAS_COATING",
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- "remarks": "NanoWiki"
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diff --git a/test/data/enm/nanoparticle-NWKI-0d776d00-aec4-3a75-9eb3-453909fc50ed.json b/test/data/enm/nanoparticle-NWKI-0d776d00-aec4-3a75-9eb3-453909fc50ed.json
deleted file mode 100644
index eace15a..0000000
--- a/test/data/enm/nanoparticle-NWKI-0d776d00-aec4-3a75-9eb3-453909fc50ed.json
+++ /dev/null
@@ -1,148 +0,0 @@
-{
- "compound": {
- "URI": "https://data.enanomapper.net/substance/NWKI-0d776d00-aec4-3a75-9eb3-453909fc50ed",
- "structype": "NA",
- "metric": null,
- "name": "",
- "cas": "",
- "einecs": ""
- },
- "values": {
- "https://data.enanomapper.net/identifier/name": "MION-AG no. 1",
- "https://data.enanomapper.net/identifier/tradename": "Shaw51 47",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-0d776d00-aec4-3a75-9eb3-453909fc50ed",
- "https://data.enanomapper.net/owner/name": "NanoWiki",
- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/PARTICLE+SIZE/1BA3811ABDEA06BCCDBE29D2BBF8289121658065/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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- "https://data.enanomapper.net/property/P-CHEM/SURFACE_CHEMISTRY_SECTION/ATOMIC+COMPOSITION/6F329893E3E7E48B645396FA27B8A2DCA31ED8EE/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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- "https://data.enanomapper.net/property/P-CHEM/SURFACE_CHEMISTRY_SECTION/ATOMIC+COMPOSITION/34B336573C015AF89068B6685256FD68F1DF39B4/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
- {
- "loValue": "Fe3O4"
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- "https://data.enanomapper.net/property/P-CHEM/ZETA_POTENTIAL_SECTION/ZETA+POTENTIAL/F8DBAC907D2F4C828B3190179059ACFF4C5A93A7/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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- },
- "values": {
- "https://data.enanomapper.net/identifier/uuid": "NWKI-577aeec9-44f3-3d49-9251-e6b6e3c26854",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23IUCLID5_UUIDDefault": "NWKI-577aeec9-44f3-3d49-9251-e6b6e3c26854",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23ChemicalNameDefault": "Fe3O4",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23CASRNDefault": "1317-61-9"
- },
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- "compositionUUID": "NWKI-0d776d00-aec4-3a75-9eb3-453909fc50ed",
- "compositionName": null,
- "relation": "HAS_CORE",
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- "function_as_additive": null
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- "hidden": false
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- {
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- "component": {
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- "metric": null,
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- "values": {
- "https://data.enanomapper.net/identifier/uuid": "NWKI-98f90b0f-416e-3444-9720-4014ab686aff",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23IUCLID5_UUIDDefault": "NWKI-98f90b0f-416e-3444-9720-4014ab686aff",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23ChemicalNameDefault": "Arabino_Galactan",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23TradeNameDefault": "ArabinoGalactanCoating"
- },
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- }
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- "compositionUUID": "NWKI-0d776d00-aec4-3a75-9eb3-453909fc50ed",
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- "relation": "HAS_COATING",
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- "tag": null,
- "remarks": "NanoWiki"
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diff --git a/test/data/enm/nanoparticle-NWKI-0e10a982-4c8b-3f90-af19-8cd443575fc4.json b/test/data/enm/nanoparticle-NWKI-0e10a982-4c8b-3f90-af19-8cd443575fc4.json
deleted file mode 100644
index b3725e1..0000000
--- a/test/data/enm/nanoparticle-NWKI-0e10a982-4c8b-3f90-af19-8cd443575fc4.json
+++ /dev/null
@@ -1,87 +0,0 @@
-{
- "compound": {
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- "structype": "NA",
- "metric": null,
- "name": "",
- "cas": "",
- "einecs": ""
- },
- "values": {
- "https://data.enanomapper.net/identifier/name": "ZnO",
- "https://data.enanomapper.net/identifier/tradename": "Gopalan2009 NM1",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-0e10a982-4c8b-3f90-af19-8cd443575fc4",
- "https://data.enanomapper.net/owner/name": "NanoWiki",
- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/PARTICLE+SIZE/1BA3811ABDEA06BCCDBE29D2BBF8289121658065/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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- ]
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- "einecs": ""
- },
- "values": {
- "https://data.enanomapper.net/identifier/uuid": "NWKI-96890ce5-c856-3200-82d1-ba92fec42d9f",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23IUCLID5_UUIDDefault": "NWKI-96890ce5-c856-3200-82d1-ba92fec42d9f",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23ChemicalNameDefault": "ZnO",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23CASRNDefault": "1314-13-2",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23EINECSDefault": "215-222-5"
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- "compositionUUID": "NWKI-0e10a982-4c8b-3f90-af19-8cd443575fc4",
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diff --git a/test/data/enm/nanoparticle-NWKI-0fef8d9c-b0c4-3e41-88d0-b85cd538a796.json b/test/data/enm/nanoparticle-NWKI-0fef8d9c-b0c4-3e41-88d0-b85cd538a796.json
deleted file mode 100644
index 8331acc..0000000
--- a/test/data/enm/nanoparticle-NWKI-0fef8d9c-b0c4-3e41-88d0-b85cd538a796.json
+++ /dev/null
@@ -1,94 +0,0 @@
-{
- "compound": {
- "URI": "https://data.enanomapper.net/substance/NWKI-0fef8d9c-b0c4-3e41-88d0-b85cd538a796",
- "structype": "NA",
- "metric": null,
- "name": "",
- "cas": "",
- "einecs": ""
- },
- "values": {
- "https://data.enanomapper.net/identifier/name": "TiO2",
- "https://data.enanomapper.net/identifier/tradename": "Cytotox2011Puzyn13",
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diff --git a/test/data/enm/nanoparticle-NWKI-101f021f-b17b-3225-85c5-3cd2f9e5208d.json b/test/data/enm/nanoparticle-NWKI-101f021f-b17b-3225-85c5-3cd2f9e5208d.json
deleted file mode 100644
index 4d9dbac..0000000
--- a/test/data/enm/nanoparticle-NWKI-101f021f-b17b-3225-85c5-3cd2f9e5208d.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-1061196b-28a0-3642-b059-10bae176d6d5.json b/test/data/enm/nanoparticle-NWKI-1061196b-28a0-3642-b059-10bae176d6d5.json
deleted file mode 100644
index 1df77ba..0000000
--- a/test/data/enm/nanoparticle-NWKI-1061196b-28a0-3642-b059-10bae176d6d5.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-11ae9232-1521-31d6-9466-c902c43d94fe.json b/test/data/enm/nanoparticle-NWKI-11ae9232-1521-31d6-9466-c902c43d94fe.json
deleted file mode 100644
index a1effa9..0000000
--- a/test/data/enm/nanoparticle-NWKI-11ae9232-1521-31d6-9466-c902c43d94fe.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-11bd7878-7fd9-365c-8f01-a452d9c7f4ec.json b/test/data/enm/nanoparticle-NWKI-11bd7878-7fd9-365c-8f01-a452d9c7f4ec.json
deleted file mode 100644
index 143e14e..0000000
--- a/test/data/enm/nanoparticle-NWKI-11bd7878-7fd9-365c-8f01-a452d9c7f4ec.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-13acd41a-bbf5-362c-bb6e-54c26f4c5f73.json b/test/data/enm/nanoparticle-NWKI-13acd41a-bbf5-362c-bb6e-54c26f4c5f73.json
deleted file mode 100644
index 5664513..0000000
--- a/test/data/enm/nanoparticle-NWKI-13acd41a-bbf5-362c-bb6e-54c26f4c5f73.json
+++ /dev/null
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deleted file mode 100644
index f4e81d2..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-144a9226-4b93-36a9-ba2d-6b6c4903357b.json b/test/data/enm/nanoparticle-NWKI-144a9226-4b93-36a9-ba2d-6b6c4903357b.json
deleted file mode 100644
index ab8d87d..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-155bb96c-2d7e-384d-b55d-45856eeda386.json b/test/data/enm/nanoparticle-NWKI-155bb96c-2d7e-384d-b55d-45856eeda386.json
deleted file mode 100644
index fa8d21e..0000000
--- a/test/data/enm/nanoparticle-NWKI-155bb96c-2d7e-384d-b55d-45856eeda386.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-156181ce-0023-347b-bc42-f19015d34cf5.json b/test/data/enm/nanoparticle-NWKI-156181ce-0023-347b-bc42-f19015d34cf5.json
deleted file mode 100644
index 6171ea2..0000000
--- a/test/data/enm/nanoparticle-NWKI-156181ce-0023-347b-bc42-f19015d34cf5.json
+++ /dev/null
@@ -1,79 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-163ec18b-7237-34d0-864a-e29fe13083fd.json b/test/data/enm/nanoparticle-NWKI-163ec18b-7237-34d0-864a-e29fe13083fd.json
deleted file mode 100644
index 2ffaa99..0000000
--- a/test/data/enm/nanoparticle-NWKI-163ec18b-7237-34d0-864a-e29fe13083fd.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-175ce512-1cbd-3a84-b216-dd0f47170dc8.json b/test/data/enm/nanoparticle-NWKI-175ce512-1cbd-3a84-b216-dd0f47170dc8.json
deleted file mode 100644
index b849b69..0000000
--- a/test/data/enm/nanoparticle-NWKI-175ce512-1cbd-3a84-b216-dd0f47170dc8.json
+++ /dev/null
@@ -1,84 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-17c74ed1-b289-3ca1-8477-390a588cb28c.json b/test/data/enm/nanoparticle-NWKI-17c74ed1-b289-3ca1-8477-390a588cb28c.json
deleted file mode 100644
index 444b08f..0000000
--- a/test/data/enm/nanoparticle-NWKI-17c74ed1-b289-3ca1-8477-390a588cb28c.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-18aebb90-aacb-3e15-b516-4d3683e9c27b.json b/test/data/enm/nanoparticle-NWKI-18aebb90-aacb-3e15-b516-4d3683e9c27b.json
deleted file mode 100644
index 82b4d7b..0000000
--- a/test/data/enm/nanoparticle-NWKI-18aebb90-aacb-3e15-b516-4d3683e9c27b.json
+++ /dev/null
@@ -1,91 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-19b5dfef-0d95-3878-9075-2897e8631277.json b/test/data/enm/nanoparticle-NWKI-19b5dfef-0d95-3878-9075-2897e8631277.json
deleted file mode 100644
index 966aeed..0000000
--- a/test/data/enm/nanoparticle-NWKI-19b5dfef-0d95-3878-9075-2897e8631277.json
+++ /dev/null
@@ -1,78 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-1acb7470-88c6-3ec1-8795-55ac6c1113cd.json b/test/data/enm/nanoparticle-NWKI-1acb7470-88c6-3ec1-8795-55ac6c1113cd.json
deleted file mode 100644
index 7a861c1..0000000
--- a/test/data/enm/nanoparticle-NWKI-1acb7470-88c6-3ec1-8795-55ac6c1113cd.json
+++ /dev/null
@@ -1,79 +0,0 @@
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index ebb111e..0000000
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deleted file mode 100644
index c2ec126..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-1c2fcc25-c597-3fab-b383-fb203ef4a69a.json b/test/data/enm/nanoparticle-NWKI-1c2fcc25-c597-3fab-b383-fb203ef4a69a.json
deleted file mode 100644
index f79657e..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-1cfacb7a-5cf9-3d42-9fc9-44b578727533.json b/test/data/enm/nanoparticle-NWKI-1cfacb7a-5cf9-3d42-9fc9-44b578727533.json
deleted file mode 100644
index 15abcbf..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-1d7c10cd-c2fe-3e95-94ec-2e4ee7099ec5.json b/test/data/enm/nanoparticle-NWKI-1d7c10cd-c2fe-3e95-94ec-2e4ee7099ec5.json
deleted file mode 100644
index 8fec9f6..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-1e10328e-662c-3c6a-bfb2-8e56ddf9d93c.json b/test/data/enm/nanoparticle-NWKI-1e10328e-662c-3c6a-bfb2-8e56ddf9d93c.json
deleted file mode 100644
index 37b0c5b..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-202b322d-51c9-3d73-a049-1e4019f8ddad.json b/test/data/enm/nanoparticle-NWKI-202b322d-51c9-3d73-a049-1e4019f8ddad.json
deleted file mode 100644
index 92267ac..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-205a198f-fcb8-3870-b99c-c6f252783613.json b/test/data/enm/nanoparticle-NWKI-205a198f-fcb8-3870-b99c-c6f252783613.json
deleted file mode 100644
index e12abc1..0000000
--- a/test/data/enm/nanoparticle-NWKI-205a198f-fcb8-3870-b99c-c6f252783613.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-2076c0ac-9601-33fb-a221-cd3055fd9b42.json b/test/data/enm/nanoparticle-NWKI-2076c0ac-9601-33fb-a221-cd3055fd9b42.json
deleted file mode 100644
index b76a3d4..0000000
--- a/test/data/enm/nanoparticle-NWKI-2076c0ac-9601-33fb-a221-cd3055fd9b42.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-21dbebfb-695f-3ff4-b7a4-bead2b52cf13.json b/test/data/enm/nanoparticle-NWKI-21dbebfb-695f-3ff4-b7a4-bead2b52cf13.json
deleted file mode 100644
index 1dfe8e1..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-227a54df-573f-3515-8366-6bf1f17dd715.json b/test/data/enm/nanoparticle-NWKI-227a54df-573f-3515-8366-6bf1f17dd715.json
deleted file mode 100644
index 2a5fc4e..0000000
--- a/test/data/enm/nanoparticle-NWKI-227a54df-573f-3515-8366-6bf1f17dd715.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-2390517f-b763-3850-b1b4-6e50fee63829.json b/test/data/enm/nanoparticle-NWKI-2390517f-b763-3850-b1b4-6e50fee63829.json
deleted file mode 100644
index 5e305d9..0000000
--- a/test/data/enm/nanoparticle-NWKI-2390517f-b763-3850-b1b4-6e50fee63829.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-239abeb4-eb11-3e6e-8301-d486e21861aa.json b/test/data/enm/nanoparticle-NWKI-239abeb4-eb11-3e6e-8301-d486e21861aa.json
deleted file mode 100644
index abf01ef..0000000
--- a/test/data/enm/nanoparticle-NWKI-239abeb4-eb11-3e6e-8301-d486e21861aa.json
+++ /dev/null
@@ -1,84 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-245fc9be-5928-354e-8fd1-ae88663923f1.json b/test/data/enm/nanoparticle-NWKI-245fc9be-5928-354e-8fd1-ae88663923f1.json
deleted file mode 100644
index 11e52fc..0000000
--- a/test/data/enm/nanoparticle-NWKI-245fc9be-5928-354e-8fd1-ae88663923f1.json
+++ /dev/null
@@ -1,88 +0,0 @@
-{
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index dca3a54..0000000
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deleted file mode 100644
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diff --git a/test/data/enm/nanoparticle-NWKI-2944da02-ade8-38cc-b547-504f6afcf25a.json b/test/data/enm/nanoparticle-NWKI-2944da02-ade8-38cc-b547-504f6afcf25a.json
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diff --git a/test/data/enm/nanoparticle-NWKI-2a046d54-ea47-31b2-a370-e886e5a0a6bb.json b/test/data/enm/nanoparticle-NWKI-2a046d54-ea47-31b2-a370-e886e5a0a6bb.json
deleted file mode 100644
index 2207fff..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-2af8ed34-029d-3644-8327-23a596cfae0d.json b/test/data/enm/nanoparticle-NWKI-2af8ed34-029d-3644-8327-23a596cfae0d.json
deleted file mode 100644
index 729a2d8..0000000
--- a/test/data/enm/nanoparticle-NWKI-2af8ed34-029d-3644-8327-23a596cfae0d.json
+++ /dev/null
@@ -1,94 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-2bd4c991-b6fb-3eb3-8a0c-794607388b79.json b/test/data/enm/nanoparticle-NWKI-2bd4c991-b6fb-3eb3-8a0c-794607388b79.json
deleted file mode 100644
index a670ad0..0000000
--- a/test/data/enm/nanoparticle-NWKI-2bd4c991-b6fb-3eb3-8a0c-794607388b79.json
+++ /dev/null
@@ -1,83 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-2e056907-7ac9-3b13-a599-ee10f2548d78.json b/test/data/enm/nanoparticle-NWKI-2e056907-7ac9-3b13-a599-ee10f2548d78.json
deleted file mode 100644
index 20e58f5..0000000
--- a/test/data/enm/nanoparticle-NWKI-2e056907-7ac9-3b13-a599-ee10f2548d78.json
+++ /dev/null
@@ -1,83 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-3068a619-f77c-3f33-848a-7b4248f6c52c.json b/test/data/enm/nanoparticle-NWKI-3068a619-f77c-3f33-848a-7b4248f6c52c.json
deleted file mode 100644
index 0a552ed..0000000
--- a/test/data/enm/nanoparticle-NWKI-3068a619-f77c-3f33-848a-7b4248f6c52c.json
+++ /dev/null
@@ -1,84 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-30a91305-4a0d-3d7b-a399-6d5b3ee0d641.json b/test/data/enm/nanoparticle-NWKI-30a91305-4a0d-3d7b-a399-6d5b3ee0d641.json
deleted file mode 100644
index b76cb2c..0000000
--- a/test/data/enm/nanoparticle-NWKI-30a91305-4a0d-3d7b-a399-6d5b3ee0d641.json
+++ /dev/null
@@ -1,82 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-31625c61-e49c-33ca-b1ac-c4f455d023ec.json b/test/data/enm/nanoparticle-NWKI-31625c61-e49c-33ca-b1ac-c4f455d023ec.json
deleted file mode 100644
index d34453f..0000000
--- a/test/data/enm/nanoparticle-NWKI-31625c61-e49c-33ca-b1ac-c4f455d023ec.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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- "https://data.enanomapper.net/identifier/uuid": "NWKI-31625c61-e49c-33ca-b1ac-c4f455d023ec",
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diff --git a/test/data/enm/nanoparticle-NWKI-33eda014-7b69-358a-93f0-e0ceef166a52.json b/test/data/enm/nanoparticle-NWKI-33eda014-7b69-358a-93f0-e0ceef166a52.json
deleted file mode 100644
index 815725a..0000000
--- a/test/data/enm/nanoparticle-NWKI-33eda014-7b69-358a-93f0-e0ceef166a52.json
+++ /dev/null
@@ -1,84 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-3424add5-867e-3dc5-864d-36c47589024b.json b/test/data/enm/nanoparticle-NWKI-3424add5-867e-3dc5-864d-36c47589024b.json
deleted file mode 100644
index 57e0fc4..0000000
--- a/test/data/enm/nanoparticle-NWKI-3424add5-867e-3dc5-864d-36c47589024b.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-3481f716-18fa-39b3-aa54-4acb67877194.json b/test/data/enm/nanoparticle-NWKI-3481f716-18fa-39b3-aa54-4acb67877194.json
deleted file mode 100644
index 4ba52f6..0000000
--- a/test/data/enm/nanoparticle-NWKI-3481f716-18fa-39b3-aa54-4acb67877194.json
+++ /dev/null
@@ -1,203 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-34a6262c-7f25-3eea-9dd0-bf1e1df40ca9.json b/test/data/enm/nanoparticle-NWKI-34a6262c-7f25-3eea-9dd0-bf1e1df40ca9.json
deleted file mode 100644
index daccc2d..0000000
--- a/test/data/enm/nanoparticle-NWKI-34a6262c-7f25-3eea-9dd0-bf1e1df40ca9.json
+++ /dev/null
@@ -1,143 +0,0 @@
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deleted file mode 100644
index d6e3ffe..0000000
--- a/test/data/enm/nanoparticle-NWKI-369d200e-2bfc-392d-ae00-ceb41fabd459.json
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diff --git a/test/data/enm/nanoparticle-NWKI-37a99dad-2a53-3076-b21f-d078b89fb4fb.json b/test/data/enm/nanoparticle-NWKI-37a99dad-2a53-3076-b21f-d078b89fb4fb.json
deleted file mode 100644
index ef7fb73..0000000
--- a/test/data/enm/nanoparticle-NWKI-37a99dad-2a53-3076-b21f-d078b89fb4fb.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-37e2b8ec-0e57-3ed8-9afc-93a3030ee25f.json b/test/data/enm/nanoparticle-NWKI-37e2b8ec-0e57-3ed8-9afc-93a3030ee25f.json
deleted file mode 100644
index a4fd58d..0000000
--- a/test/data/enm/nanoparticle-NWKI-37e2b8ec-0e57-3ed8-9afc-93a3030ee25f.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-3934179a-66df-3b1b-9930-3e7e9fbdcc62.json b/test/data/enm/nanoparticle-NWKI-3934179a-66df-3b1b-9930-3e7e9fbdcc62.json
deleted file mode 100644
index 96e434e..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-395bf212-b710-3385-9c23-715a7055b015.json b/test/data/enm/nanoparticle-NWKI-395bf212-b710-3385-9c23-715a7055b015.json
deleted file mode 100644
index c81bb54..0000000
--- a/test/data/enm/nanoparticle-NWKI-395bf212-b710-3385-9c23-715a7055b015.json
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diff --git a/test/data/enm/nanoparticle-NWKI-3a3b2bcd-8284-37dc-a619-56ffbd7ebd68.json b/test/data/enm/nanoparticle-NWKI-3a3b2bcd-8284-37dc-a619-56ffbd7ebd68.json
deleted file mode 100644
index 4ccc555..0000000
--- a/test/data/enm/nanoparticle-NWKI-3a3b2bcd-8284-37dc-a619-56ffbd7ebd68.json
+++ /dev/null
@@ -1,88 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-3b09fdd1-3024-3be3-b1c6-332b44f75f99.json b/test/data/enm/nanoparticle-NWKI-3b09fdd1-3024-3be3-b1c6-332b44f75f99.json
deleted file mode 100644
index 1714859..0000000
--- a/test/data/enm/nanoparticle-NWKI-3b09fdd1-3024-3be3-b1c6-332b44f75f99.json
+++ /dev/null
@@ -1,94 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-3b7d88ba-32e3-33eb-b99d-b3497644a574.json b/test/data/enm/nanoparticle-NWKI-3b7d88ba-32e3-33eb-b99d-b3497644a574.json
deleted file mode 100644
index c1f3224..0000000
--- a/test/data/enm/nanoparticle-NWKI-3b7d88ba-32e3-33eb-b99d-b3497644a574.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-3bbccc84-019f-369f-ba70-490fcfde4423.json b/test/data/enm/nanoparticle-NWKI-3bbccc84-019f-369f-ba70-490fcfde4423.json
deleted file mode 100644
index 5053e6c..0000000
--- a/test/data/enm/nanoparticle-NWKI-3bbccc84-019f-369f-ba70-490fcfde4423.json
+++ /dev/null
@@ -1,94 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-3c8c8bb2-416f-3bff-862a-8433538cd4c5.json b/test/data/enm/nanoparticle-NWKI-3c8c8bb2-416f-3bff-862a-8433538cd4c5.json
deleted file mode 100644
index ac537ad..0000000
--- a/test/data/enm/nanoparticle-NWKI-3c8c8bb2-416f-3bff-862a-8433538cd4c5.json
+++ /dev/null
@@ -1,94 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-3ccb7313-0905-322a-ac62-09adb667bc0f.json b/test/data/enm/nanoparticle-NWKI-3ccb7313-0905-322a-ac62-09adb667bc0f.json
deleted file mode 100644
index 1980140..0000000
--- a/test/data/enm/nanoparticle-NWKI-3ccb7313-0905-322a-ac62-09adb667bc0f.json
+++ /dev/null
@@ -1,100 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-3ccff23c-b3d6-3614-aef4-4324be42804b.json b/test/data/enm/nanoparticle-NWKI-3ccff23c-b3d6-3614-aef4-4324be42804b.json
deleted file mode 100644
index 3a5e618..0000000
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+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-3d8aaa66-97d9-351b-9771-691300d5e97c.json b/test/data/enm/nanoparticle-NWKI-3d8aaa66-97d9-351b-9771-691300d5e97c.json
deleted file mode 100644
index 9b98568..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-3db8eb74-b206-31ad-8c1b-3569703c47cb.json b/test/data/enm/nanoparticle-NWKI-3db8eb74-b206-31ad-8c1b-3569703c47cb.json
deleted file mode 100644
index 4360874..0000000
--- a/test/data/enm/nanoparticle-NWKI-3db8eb74-b206-31ad-8c1b-3569703c47cb.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-3e42f6e5-635a-3f1e-a51a-39ce26751ec9.json b/test/data/enm/nanoparticle-NWKI-3e42f6e5-635a-3f1e-a51a-39ce26751ec9.json
deleted file mode 100644
index 8bcb456..0000000
--- a/test/data/enm/nanoparticle-NWKI-3e42f6e5-635a-3f1e-a51a-39ce26751ec9.json
+++ /dev/null
@@ -1,94 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-3e6392b9-35fb-39ad-ad98-f6d6de37659a.json b/test/data/enm/nanoparticle-NWKI-3e6392b9-35fb-39ad-ad98-f6d6de37659a.json
deleted file mode 100644
index b844b28..0000000
--- a/test/data/enm/nanoparticle-NWKI-3e6392b9-35fb-39ad-ad98-f6d6de37659a.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-3fb9be70-8c15-3b78-94e7-5c3c88799818.json b/test/data/enm/nanoparticle-NWKI-3fb9be70-8c15-3b78-94e7-5c3c88799818.json
deleted file mode 100644
index 706dd39..0000000
--- a/test/data/enm/nanoparticle-NWKI-3fb9be70-8c15-3b78-94e7-5c3c88799818.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-408c6826-d34c-3523-ab46-d8add3ade77d.json b/test/data/enm/nanoparticle-NWKI-408c6826-d34c-3523-ab46-d8add3ade77d.json
deleted file mode 100644
index 80b1c37..0000000
--- a/test/data/enm/nanoparticle-NWKI-408c6826-d34c-3523-ab46-d8add3ade77d.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-4129bdaa-a693-326a-9c8f-67d721433481.json b/test/data/enm/nanoparticle-NWKI-4129bdaa-a693-326a-9c8f-67d721433481.json
deleted file mode 100644
index 2090cd1..0000000
--- a/test/data/enm/nanoparticle-NWKI-4129bdaa-a693-326a-9c8f-67d721433481.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-417f0133-8f2c-3255-bdcf-7d71ac295d00.json b/test/data/enm/nanoparticle-NWKI-417f0133-8f2c-3255-bdcf-7d71ac295d00.json
deleted file mode 100644
index 3d32ca9..0000000
--- a/test/data/enm/nanoparticle-NWKI-417f0133-8f2c-3255-bdcf-7d71ac295d00.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-41e63d70-d7c0-3bd2-9a65-e99dcdedb1a5.json b/test/data/enm/nanoparticle-NWKI-41e63d70-d7c0-3bd2-9a65-e99dcdedb1a5.json
deleted file mode 100644
index d39f09a..0000000
--- a/test/data/enm/nanoparticle-NWKI-41e63d70-d7c0-3bd2-9a65-e99dcdedb1a5.json
+++ /dev/null
@@ -1,84 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-4358aa69-dec1-387a-b7ea-2238198ccdff.json b/test/data/enm/nanoparticle-NWKI-4358aa69-dec1-387a-b7ea-2238198ccdff.json
deleted file mode 100644
index af7a5af..0000000
--- a/test/data/enm/nanoparticle-NWKI-4358aa69-dec1-387a-b7ea-2238198ccdff.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-438d1468-d5d7-3977-9dab-15a3a05add38.json b/test/data/enm/nanoparticle-NWKI-438d1468-d5d7-3977-9dab-15a3a05add38.json
deleted file mode 100644
index c709aeb..0000000
--- a/test/data/enm/nanoparticle-NWKI-438d1468-d5d7-3977-9dab-15a3a05add38.json
+++ /dev/null
@@ -1,108 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-448f6f9b-90a1-3e7c-a5aa-5991df77a2b1.json b/test/data/enm/nanoparticle-NWKI-448f6f9b-90a1-3e7c-a5aa-5991df77a2b1.json
deleted file mode 100644
index 1d57d2b..0000000
--- a/test/data/enm/nanoparticle-NWKI-448f6f9b-90a1-3e7c-a5aa-5991df77a2b1.json
+++ /dev/null
@@ -1,26 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-44b3fa7b-1667-3f4a-9e31-7a5202320cf3.json b/test/data/enm/nanoparticle-NWKI-44b3fa7b-1667-3f4a-9e31-7a5202320cf3.json
deleted file mode 100644
index d0ccb48..0000000
--- a/test/data/enm/nanoparticle-NWKI-44b3fa7b-1667-3f4a-9e31-7a5202320cf3.json
+++ /dev/null
@@ -1,84 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-44b4442c-361f-309d-8c19-979f4ef5f574.json b/test/data/enm/nanoparticle-NWKI-44b4442c-361f-309d-8c19-979f4ef5f574.json
deleted file mode 100644
index 8b0ac32..0000000
--- a/test/data/enm/nanoparticle-NWKI-44b4442c-361f-309d-8c19-979f4ef5f574.json
+++ /dev/null
@@ -1,26 +0,0 @@
-{
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- "https://data.enanomapper.net/identifier/tradename": "JRCNM01002a",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-44b4442c-361f-309d-8c19-979f4ef5f574",
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diff --git a/test/data/enm/nanoparticle-NWKI-4551e0f7-e515-3cdb-a099-c2b99b04883d.json b/test/data/enm/nanoparticle-NWKI-4551e0f7-e515-3cdb-a099-c2b99b04883d.json
deleted file mode 100644
index 23910b7..0000000
--- a/test/data/enm/nanoparticle-NWKI-4551e0f7-e515-3cdb-a099-c2b99b04883d.json
+++ /dev/null
@@ -1,94 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-458c2d5a-53f0-3c65-81eb-6fb5d128db59.json b/test/data/enm/nanoparticle-NWKI-458c2d5a-53f0-3c65-81eb-6fb5d128db59.json
deleted file mode 100644
index 209ab03..0000000
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deleted file mode 100644
index 2dad091..0000000
--- a/test/data/enm/nanoparticle-NWKI-45fc0568-39f3-33f2-bd68-f953733c0c96.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-473ed1d8-ae5a-3c80-b3f7-50dbc4fd9a3b.json b/test/data/enm/nanoparticle-NWKI-473ed1d8-ae5a-3c80-b3f7-50dbc4fd9a3b.json
deleted file mode 100644
index 7030c84..0000000
--- a/test/data/enm/nanoparticle-NWKI-473ed1d8-ae5a-3c80-b3f7-50dbc4fd9a3b.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-47d254de-8242-3374-9ed3-085227d473cc.json b/test/data/enm/nanoparticle-NWKI-47d254de-8242-3374-9ed3-085227d473cc.json
deleted file mode 100644
index b0fd69f..0000000
--- a/test/data/enm/nanoparticle-NWKI-47d254de-8242-3374-9ed3-085227d473cc.json
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diff --git a/test/data/enm/nanoparticle-NWKI-4832de65-5a92-3849-8061-729a2d83017e.json b/test/data/enm/nanoparticle-NWKI-4832de65-5a92-3849-8061-729a2d83017e.json
deleted file mode 100644
index d2ffc90..0000000
--- a/test/data/enm/nanoparticle-NWKI-4832de65-5a92-3849-8061-729a2d83017e.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-4973bcff-0cf7-34d2-84ca-ea7acd65c502.json b/test/data/enm/nanoparticle-NWKI-4973bcff-0cf7-34d2-84ca-ea7acd65c502.json
deleted file mode 100644
index cc08270..0000000
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+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-4b4cb369-8202-3483-9220-553e433c9159.json b/test/data/enm/nanoparticle-NWKI-4b4cb369-8202-3483-9220-553e433c9159.json
deleted file mode 100644
index 2d35e12..0000000
--- a/test/data/enm/nanoparticle-NWKI-4b4cb369-8202-3483-9220-553e433c9159.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-4beee533-65e4-364a-adb7-7a520180de61.json b/test/data/enm/nanoparticle-NWKI-4beee533-65e4-364a-adb7-7a520180de61.json
deleted file mode 100644
index e5cedf9..0000000
--- a/test/data/enm/nanoparticle-NWKI-4beee533-65e4-364a-adb7-7a520180de61.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-4dd2cfcb-0daf-33f7-ba67-f629e3019271.json b/test/data/enm/nanoparticle-NWKI-4dd2cfcb-0daf-33f7-ba67-f629e3019271.json
deleted file mode 100644
index 24f3c08..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-4e021275-ae4e-3d24-bdb8-40c6d8d9d6fc.json b/test/data/enm/nanoparticle-NWKI-4e021275-ae4e-3d24-bdb8-40c6d8d9d6fc.json
deleted file mode 100644
index 03bfac8..0000000
--- a/test/data/enm/nanoparticle-NWKI-4e021275-ae4e-3d24-bdb8-40c6d8d9d6fc.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-4e62b022-02b9-35e7-a653-7ee317f54ae8.json b/test/data/enm/nanoparticle-NWKI-4e62b022-02b9-35e7-a653-7ee317f54ae8.json
deleted file mode 100644
index fa3988b..0000000
--- a/test/data/enm/nanoparticle-NWKI-4e62b022-02b9-35e7-a653-7ee317f54ae8.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-4e9fdd73-d8e6-3c95-a792-3a96ba220041.json b/test/data/enm/nanoparticle-NWKI-4e9fdd73-d8e6-3c95-a792-3a96ba220041.json
deleted file mode 100644
index 5995c41..0000000
--- a/test/data/enm/nanoparticle-NWKI-4e9fdd73-d8e6-3c95-a792-3a96ba220041.json
+++ /dev/null
@@ -1,78 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-4f1a3729-4a88-31bc-abca-7eb6503a73d4.json b/test/data/enm/nanoparticle-NWKI-4f1a3729-4a88-31bc-abca-7eb6503a73d4.json
deleted file mode 100644
index 66e8d87..0000000
--- a/test/data/enm/nanoparticle-NWKI-4f1a3729-4a88-31bc-abca-7eb6503a73d4.json
+++ /dev/null
@@ -1,83 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-4f91db77-4cd0-3482-b989-571d2a9a4228.json b/test/data/enm/nanoparticle-NWKI-4f91db77-4cd0-3482-b989-571d2a9a4228.json
deleted file mode 100644
index 89815c4..0000000
--- a/test/data/enm/nanoparticle-NWKI-4f91db77-4cd0-3482-b989-571d2a9a4228.json
+++ /dev/null
@@ -1,143 +0,0 @@
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index 6015e35..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-506de59a-ae92-361b-a934-0fdfa41101c0.json b/test/data/enm/nanoparticle-NWKI-506de59a-ae92-361b-a934-0fdfa41101c0.json
deleted file mode 100644
index a32fc61..0000000
--- a/test/data/enm/nanoparticle-NWKI-506de59a-ae92-361b-a934-0fdfa41101c0.json
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diff --git a/test/data/enm/nanoparticle-NWKI-509caa0e-0b8c-30e9-9592-48c6a83fe4ec.json b/test/data/enm/nanoparticle-NWKI-509caa0e-0b8c-30e9-9592-48c6a83fe4ec.json
deleted file mode 100644
index 1eebd2d..0000000
--- a/test/data/enm/nanoparticle-NWKI-509caa0e-0b8c-30e9-9592-48c6a83fe4ec.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-50ebd964-1e95-3cdf-87e9-ff7146b93e22.json b/test/data/enm/nanoparticle-NWKI-50ebd964-1e95-3cdf-87e9-ff7146b93e22.json
deleted file mode 100644
index b42bc6c..0000000
--- a/test/data/enm/nanoparticle-NWKI-50ebd964-1e95-3cdf-87e9-ff7146b93e22.json
+++ /dev/null
@@ -1,78 +0,0 @@
-{
- "compound": {
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- "https://data.enanomapper.net/identifier/uuid": "NWKI-50ebd964-1e95-3cdf-87e9-ff7146b93e22",
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diff --git a/test/data/enm/nanoparticle-NWKI-5136670d-2925-31d0-8e12-811f8d67677f.json b/test/data/enm/nanoparticle-NWKI-5136670d-2925-31d0-8e12-811f8d67677f.json
deleted file mode 100644
index 558710d..0000000
--- a/test/data/enm/nanoparticle-NWKI-5136670d-2925-31d0-8e12-811f8d67677f.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-5172b34a-a6f6-398f-ace6-1d30e6bc9efa.json b/test/data/enm/nanoparticle-NWKI-5172b34a-a6f6-398f-ace6-1d30e6bc9efa.json
deleted file mode 100644
index 834a193..0000000
--- a/test/data/enm/nanoparticle-NWKI-5172b34a-a6f6-398f-ace6-1d30e6bc9efa.json
+++ /dev/null
@@ -1,203 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-52e8adb0-6aba-3e7f-bc0c-85cb36c394a2.json b/test/data/enm/nanoparticle-NWKI-52e8adb0-6aba-3e7f-bc0c-85cb36c394a2.json
deleted file mode 100644
index 692cff9..0000000
--- a/test/data/enm/nanoparticle-NWKI-52e8adb0-6aba-3e7f-bc0c-85cb36c394a2.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-52edeff5-900d-3f5a-86ba-550e9b368239.json b/test/data/enm/nanoparticle-NWKI-52edeff5-900d-3f5a-86ba-550e9b368239.json
deleted file mode 100644
index 8bfe752..0000000
--- a/test/data/enm/nanoparticle-NWKI-52edeff5-900d-3f5a-86ba-550e9b368239.json
+++ /dev/null
@@ -1,128 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-535c1a8b-71d0-3388-aaf5-e3a5c86510cb.json b/test/data/enm/nanoparticle-NWKI-535c1a8b-71d0-3388-aaf5-e3a5c86510cb.json
deleted file mode 100644
index af98778..0000000
--- a/test/data/enm/nanoparticle-NWKI-535c1a8b-71d0-3388-aaf5-e3a5c86510cb.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-536c91ba-6cf8-3808-b611-f7d5830f5ed8.json b/test/data/enm/nanoparticle-NWKI-536c91ba-6cf8-3808-b611-f7d5830f5ed8.json
deleted file mode 100644
index 3239e30..0000000
--- a/test/data/enm/nanoparticle-NWKI-536c91ba-6cf8-3808-b611-f7d5830f5ed8.json
+++ /dev/null
@@ -1,83 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-5454d5cb-1033-3d6f-a31e-038752525533.json b/test/data/enm/nanoparticle-NWKI-5454d5cb-1033-3d6f-a31e-038752525533.json
deleted file mode 100644
index 47f6a78..0000000
--- a/test/data/enm/nanoparticle-NWKI-5454d5cb-1033-3d6f-a31e-038752525533.json
+++ /dev/null
@@ -1,94 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-54de4b1f-da2b-38f6-ab43-a46959eb44e2.json b/test/data/enm/nanoparticle-NWKI-54de4b1f-da2b-38f6-ab43-a46959eb44e2.json
deleted file mode 100644
index 0e337ef..0000000
--- a/test/data/enm/nanoparticle-NWKI-54de4b1f-da2b-38f6-ab43-a46959eb44e2.json
+++ /dev/null
@@ -1,79 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-556872ae-f5af-3e0e-a5e5-009bc0eb65b5.json b/test/data/enm/nanoparticle-NWKI-556872ae-f5af-3e0e-a5e5-009bc0eb65b5.json
deleted file mode 100644
index 851e59e..0000000
--- a/test/data/enm/nanoparticle-NWKI-556872ae-f5af-3e0e-a5e5-009bc0eb65b5.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-566286ef-03eb-317a-8d9d-24fffefefc0b.json b/test/data/enm/nanoparticle-NWKI-566286ef-03eb-317a-8d9d-24fffefefc0b.json
deleted file mode 100644
index ced1a53..0000000
--- a/test/data/enm/nanoparticle-NWKI-566286ef-03eb-317a-8d9d-24fffefefc0b.json
+++ /dev/null
@@ -1,143 +0,0 @@
-{
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- "https://data.enanomapper.net/identifier/uuid": "NWKI-566286ef-03eb-317a-8d9d-24fffefefc0b",
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diff --git a/test/data/enm/nanoparticle-NWKI-56be1e50-c29f-3a48-b626-701f504dd1be.json b/test/data/enm/nanoparticle-NWKI-56be1e50-c29f-3a48-b626-701f504dd1be.json
deleted file mode 100644
index deebb3c..0000000
--- a/test/data/enm/nanoparticle-NWKI-56be1e50-c29f-3a48-b626-701f504dd1be.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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- "structype": "NA",
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- "https://data.enanomapper.net/identifier/uuid": "NWKI-56be1e50-c29f-3a48-b626-701f504dd1be",
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diff --git a/test/data/enm/nanoparticle-NWKI-56d1ba56-5960-363c-941a-16d2d7624686.json b/test/data/enm/nanoparticle-NWKI-56d1ba56-5960-363c-941a-16d2d7624686.json
deleted file mode 100644
index ee759c0..0000000
--- a/test/data/enm/nanoparticle-NWKI-56d1ba56-5960-363c-941a-16d2d7624686.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
- "compound": {
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- "structype": "NA",
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- "https://data.enanomapper.net/identifier/uuid": "NWKI-56d1ba56-5960-363c-941a-16d2d7624686",
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diff --git a/test/data/enm/nanoparticle-NWKI-56d49cc3-4a76-354b-9a77-4b2ecb2dbef0.json b/test/data/enm/nanoparticle-NWKI-56d49cc3-4a76-354b-9a77-4b2ecb2dbef0.json
deleted file mode 100644
index 1331ea4..0000000
--- a/test/data/enm/nanoparticle-NWKI-56d49cc3-4a76-354b-9a77-4b2ecb2dbef0.json
+++ /dev/null
@@ -1,109 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-575830c1-f826-37e2-b0aa-e44d3c0386be.json b/test/data/enm/nanoparticle-NWKI-575830c1-f826-37e2-b0aa-e44d3c0386be.json
deleted file mode 100644
index a533baf..0000000
--- a/test/data/enm/nanoparticle-NWKI-575830c1-f826-37e2-b0aa-e44d3c0386be.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-57789117-033f-38a5-b3b1-508c85fa33a4.json b/test/data/enm/nanoparticle-NWKI-57789117-033f-38a5-b3b1-508c85fa33a4.json
deleted file mode 100644
index a7143ac..0000000
--- a/test/data/enm/nanoparticle-NWKI-57789117-033f-38a5-b3b1-508c85fa33a4.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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- "structype": "NA",
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index a4d1136..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-5ae4ae3d-db28-3647-9a7a-0c2e3d8076aa.json b/test/data/enm/nanoparticle-NWKI-5ae4ae3d-db28-3647-9a7a-0c2e3d8076aa.json
deleted file mode 100644
index 1d43ffd..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-5cd085d1-3c2b-390d-8ffd-377d8f729258.json b/test/data/enm/nanoparticle-NWKI-5cd085d1-3c2b-390d-8ffd-377d8f729258.json
deleted file mode 100644
index 7507584..0000000
--- a/test/data/enm/nanoparticle-NWKI-5cd085d1-3c2b-390d-8ffd-377d8f729258.json
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diff --git a/test/data/enm/nanoparticle-NWKI-5e5ed57f-33d3-39bb-9511-3604a0babf5e.json b/test/data/enm/nanoparticle-NWKI-5e5ed57f-33d3-39bb-9511-3604a0babf5e.json
deleted file mode 100644
index fed1f27..0000000
--- a/test/data/enm/nanoparticle-NWKI-5e5ed57f-33d3-39bb-9511-3604a0babf5e.json
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-5eff14ab-be8b-3f57-96fc-7ed09e7546b5.json b/test/data/enm/nanoparticle-NWKI-5eff14ab-be8b-3f57-96fc-7ed09e7546b5.json
deleted file mode 100644
index 77e2351..0000000
--- a/test/data/enm/nanoparticle-NWKI-5eff14ab-be8b-3f57-96fc-7ed09e7546b5.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-5f88a526-3e3f-3da5-8082-8d1da0cdfefa.json b/test/data/enm/nanoparticle-NWKI-5f88a526-3e3f-3da5-8082-8d1da0cdfefa.json
deleted file mode 100644
index cf6c4ad..0000000
--- a/test/data/enm/nanoparticle-NWKI-5f88a526-3e3f-3da5-8082-8d1da0cdfefa.json
+++ /dev/null
@@ -1,92 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-5f90c0a2-07fa-3da7-afd3-861a43f8b180.json b/test/data/enm/nanoparticle-NWKI-5f90c0a2-07fa-3da7-afd3-861a43f8b180.json
deleted file mode 100644
index 7d6ef5e..0000000
--- a/test/data/enm/nanoparticle-NWKI-5f90c0a2-07fa-3da7-afd3-861a43f8b180.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-605f4f43-028b-3a42-ae94-9852a9f6f5f8.json b/test/data/enm/nanoparticle-NWKI-605f4f43-028b-3a42-ae94-9852a9f6f5f8.json
deleted file mode 100644
index 8806007..0000000
--- a/test/data/enm/nanoparticle-NWKI-605f4f43-028b-3a42-ae94-9852a9f6f5f8.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-61515bd0-5a80-3428-a093-01be1d677862.json b/test/data/enm/nanoparticle-NWKI-61515bd0-5a80-3428-a093-01be1d677862.json
deleted file mode 100644
index b90fa8b..0000000
--- a/test/data/enm/nanoparticle-NWKI-61515bd0-5a80-3428-a093-01be1d677862.json
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diff --git a/test/data/enm/nanoparticle-NWKI-61c73e33-28ab-3387-8cdf-cb7c135fb06c.json b/test/data/enm/nanoparticle-NWKI-61c73e33-28ab-3387-8cdf-cb7c135fb06c.json
deleted file mode 100644
index cd1fd28..0000000
--- a/test/data/enm/nanoparticle-NWKI-61c73e33-28ab-3387-8cdf-cb7c135fb06c.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-6392b929-1b64-34ce-90c6-162b99ce3992.json b/test/data/enm/nanoparticle-NWKI-6392b929-1b64-34ce-90c6-162b99ce3992.json
deleted file mode 100644
index 546fa52..0000000
--- a/test/data/enm/nanoparticle-NWKI-6392b929-1b64-34ce-90c6-162b99ce3992.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-644d4c3e-73d3-3f47-adf0-03ea91150074.json b/test/data/enm/nanoparticle-NWKI-644d4c3e-73d3-3f47-adf0-03ea91150074.json
deleted file mode 100644
index 73afe40..0000000
--- a/test/data/enm/nanoparticle-NWKI-644d4c3e-73d3-3f47-adf0-03ea91150074.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-651c965f-b68a-3ab8-8767-47c62755fa23.json b/test/data/enm/nanoparticle-NWKI-651c965f-b68a-3ab8-8767-47c62755fa23.json
deleted file mode 100644
index 5071486..0000000
--- a/test/data/enm/nanoparticle-NWKI-651c965f-b68a-3ab8-8767-47c62755fa23.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-666817c2-87cb-3826-92f8-e79a7b37957d.json b/test/data/enm/nanoparticle-NWKI-666817c2-87cb-3826-92f8-e79a7b37957d.json
deleted file mode 100644
index 3e2c431..0000000
--- a/test/data/enm/nanoparticle-NWKI-666817c2-87cb-3826-92f8-e79a7b37957d.json
+++ /dev/null
@@ -1,96 +0,0 @@
-{
- "compound": {
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diff --git a/test/data/enm/nanoparticle-NWKI-668fe89b-964c-384b-ae34-86a1c3070b8c.json b/test/data/enm/nanoparticle-NWKI-668fe89b-964c-384b-ae34-86a1c3070b8c.json
deleted file mode 100644
index 06cebef..0000000
--- a/test/data/enm/nanoparticle-NWKI-668fe89b-964c-384b-ae34-86a1c3070b8c.json
+++ /dev/null
@@ -1,26 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-674cfd7c-bc77-36c7-bbe0-d52dd0233d64.json b/test/data/enm/nanoparticle-NWKI-674cfd7c-bc77-36c7-bbe0-d52dd0233d64.json
deleted file mode 100644
index da0c544..0000000
--- a/test/data/enm/nanoparticle-NWKI-674cfd7c-bc77-36c7-bbe0-d52dd0233d64.json
+++ /dev/null
@@ -1,96 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-67b71fb2-85c1-3130-bd4e-84da8bc05fc9.json b/test/data/enm/nanoparticle-NWKI-67b71fb2-85c1-3130-bd4e-84da8bc05fc9.json
deleted file mode 100644
index 48bbf18..0000000
--- a/test/data/enm/nanoparticle-NWKI-67b71fb2-85c1-3130-bd4e-84da8bc05fc9.json
+++ /dev/null
@@ -1,97 +0,0 @@
-{
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- "https://data.enanomapper.net/identifier/uuid": "NWKI-67b71fb2-85c1-3130-bd4e-84da8bc05fc9",
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diff --git a/test/data/enm/nanoparticle-NWKI-6821e372-3b17-3a56-8fac-f66115f24e5d.json b/test/data/enm/nanoparticle-NWKI-6821e372-3b17-3a56-8fac-f66115f24e5d.json
deleted file mode 100644
index 2ade9b7..0000000
--- a/test/data/enm/nanoparticle-NWKI-6821e372-3b17-3a56-8fac-f66115f24e5d.json
+++ /dev/null
@@ -1,91 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-694f4202-c0ba-3ed9-a0f3-0a5ccba9e9c1.json b/test/data/enm/nanoparticle-NWKI-694f4202-c0ba-3ed9-a0f3-0a5ccba9e9c1.json
deleted file mode 100644
index 8eace16..0000000
--- a/test/data/enm/nanoparticle-NWKI-694f4202-c0ba-3ed9-a0f3-0a5ccba9e9c1.json
+++ /dev/null
@@ -1,88 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-696f7b05-2dea-3a14-b080-fef134f4eff5.json b/test/data/enm/nanoparticle-NWKI-696f7b05-2dea-3a14-b080-fef134f4eff5.json
deleted file mode 100644
index adb120f..0000000
--- a/test/data/enm/nanoparticle-NWKI-696f7b05-2dea-3a14-b080-fef134f4eff5.json
+++ /dev/null
@@ -1,83 +0,0 @@
-{
- "compound": {
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- "structype": "NA",
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- "https://data.enanomapper.net/identifier/uuid": "NWKI-696f7b05-2dea-3a14-b080-fef134f4eff5",
- "https://data.enanomapper.net/owner/name": "NanoWiki",
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diff --git a/test/data/enm/nanoparticle-NWKI-69b604fb-e892-31ba-a6f5-feb6cb04effb.json b/test/data/enm/nanoparticle-NWKI-69b604fb-e892-31ba-a6f5-feb6cb04effb.json
deleted file mode 100644
index 912934e..0000000
--- a/test/data/enm/nanoparticle-NWKI-69b604fb-e892-31ba-a6f5-feb6cb04effb.json
+++ /dev/null
@@ -1,201 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-69fa9265-308d-30c5-9d86-1f18cde14afb.json b/test/data/enm/nanoparticle-NWKI-69fa9265-308d-30c5-9d86-1f18cde14afb.json
deleted file mode 100644
index 59cce18..0000000
--- a/test/data/enm/nanoparticle-NWKI-69fa9265-308d-30c5-9d86-1f18cde14afb.json
+++ /dev/null
@@ -1,82 +0,0 @@
-{
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- "https://data.enanomapper.net/identifier/uuid": "NWKI-69fa9265-308d-30c5-9d86-1f18cde14afb",
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diff --git a/test/data/enm/nanoparticle-NWKI-6a1bf5d8-786d-3268-b852-923b3068c0d0.json b/test/data/enm/nanoparticle-NWKI-6a1bf5d8-786d-3268-b852-923b3068c0d0.json
deleted file mode 100644
index e7b5189..0000000
--- a/test/data/enm/nanoparticle-NWKI-6a1bf5d8-786d-3268-b852-923b3068c0d0.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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- "structype": "NA",
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- "https://data.enanomapper.net/identifier/tradename": "Zhou2008 M32",
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diff --git a/test/data/enm/nanoparticle-NWKI-6a8efcf8-a19c-3fb3-b8ca-3f4e1a09fcb0.json b/test/data/enm/nanoparticle-NWKI-6a8efcf8-a19c-3fb3-b8ca-3f4e1a09fcb0.json
deleted file mode 100644
index 0f2a0e7..0000000
--- a/test/data/enm/nanoparticle-NWKI-6a8efcf8-a19c-3fb3-b8ca-3f4e1a09fcb0.json
+++ /dev/null
@@ -1,84 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-6b07ffd5-b573-3889-a64c-ae7cc99ff977.json b/test/data/enm/nanoparticle-NWKI-6b07ffd5-b573-3889-a64c-ae7cc99ff977.json
deleted file mode 100644
index 0158202..0000000
--- a/test/data/enm/nanoparticle-NWKI-6b07ffd5-b573-3889-a64c-ae7cc99ff977.json
+++ /dev/null
@@ -1,91 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-6b1b44fa-70c1-3034-9c4b-7efb334762e0.json b/test/data/enm/nanoparticle-NWKI-6b1b44fa-70c1-3034-9c4b-7efb334762e0.json
deleted file mode 100644
index 2f58e74..0000000
--- a/test/data/enm/nanoparticle-NWKI-6b1b44fa-70c1-3034-9c4b-7efb334762e0.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-6b21bb47-9ae8-3fb5-9811-b7dbeecbed8e.json b/test/data/enm/nanoparticle-NWKI-6b21bb47-9ae8-3fb5-9811-b7dbeecbed8e.json
deleted file mode 100644
index c12f406..0000000
--- a/test/data/enm/nanoparticle-NWKI-6b21bb47-9ae8-3fb5-9811-b7dbeecbed8e.json
+++ /dev/null
@@ -1,26 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-6b4d33a5-b573-3dbe-9ec3-9d2a9bc42a2e.json b/test/data/enm/nanoparticle-NWKI-6b4d33a5-b573-3dbe-9ec3-9d2a9bc42a2e.json
deleted file mode 100644
index 594d129..0000000
--- a/test/data/enm/nanoparticle-NWKI-6b4d33a5-b573-3dbe-9ec3-9d2a9bc42a2e.json
+++ /dev/null
@@ -1,36 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-6b8a44a2-b835-3f75-903c-cf0a71a247c9.json b/test/data/enm/nanoparticle-NWKI-6b8a44a2-b835-3f75-903c-cf0a71a247c9.json
deleted file mode 100644
index 620f2c1..0000000
--- a/test/data/enm/nanoparticle-NWKI-6b8a44a2-b835-3f75-903c-cf0a71a247c9.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-6cab56b4-69d9-36e0-8c17-f467d08b2555.json b/test/data/enm/nanoparticle-NWKI-6cab56b4-69d9-36e0-8c17-f467d08b2555.json
deleted file mode 100644
index e7ac30c..0000000
--- a/test/data/enm/nanoparticle-NWKI-6cab56b4-69d9-36e0-8c17-f467d08b2555.json
+++ /dev/null
@@ -1,203 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-6cde234d-f073-3e1d-acd2-0ea10a01763f.json b/test/data/enm/nanoparticle-NWKI-6cde234d-f073-3e1d-acd2-0ea10a01763f.json
deleted file mode 100644
index 117474b..0000000
--- a/test/data/enm/nanoparticle-NWKI-6cde234d-f073-3e1d-acd2-0ea10a01763f.json
+++ /dev/null
@@ -1,84 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-6d5462cc-7e11-3919-b769-135f56fd2536.json b/test/data/enm/nanoparticle-NWKI-6d5462cc-7e11-3919-b769-135f56fd2536.json
deleted file mode 100644
index d4af15a..0000000
--- a/test/data/enm/nanoparticle-NWKI-6d5462cc-7e11-3919-b769-135f56fd2536.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-6d8427f9-b822-3499-ba82-b32ff5dcf3ff.json b/test/data/enm/nanoparticle-NWKI-6d8427f9-b822-3499-ba82-b32ff5dcf3ff.json
deleted file mode 100644
index 1e68acd..0000000
--- a/test/data/enm/nanoparticle-NWKI-6d8427f9-b822-3499-ba82-b32ff5dcf3ff.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-6e6a5fec-23c2-3fff-8522-a22689091196.json b/test/data/enm/nanoparticle-NWKI-6e6a5fec-23c2-3fff-8522-a22689091196.json
deleted file mode 100644
index 7612131..0000000
--- a/test/data/enm/nanoparticle-NWKI-6e6a5fec-23c2-3fff-8522-a22689091196.json
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-6ede15ea-8037-379f-933e-7b947e155c6a.json b/test/data/enm/nanoparticle-NWKI-6ede15ea-8037-379f-933e-7b947e155c6a.json
deleted file mode 100644
index d132f7c..0000000
--- a/test/data/enm/nanoparticle-NWKI-6ede15ea-8037-379f-933e-7b947e155c6a.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-6ede930f-f842-30d2-a564-84a5e6cda5df.json b/test/data/enm/nanoparticle-NWKI-6ede930f-f842-30d2-a564-84a5e6cda5df.json
deleted file mode 100644
index 22f5a4c..0000000
--- a/test/data/enm/nanoparticle-NWKI-6ede930f-f842-30d2-a564-84a5e6cda5df.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-6f02a17e-8598-32a1-bac7-e6a930ddcc3a.json b/test/data/enm/nanoparticle-NWKI-6f02a17e-8598-32a1-bac7-e6a930ddcc3a.json
deleted file mode 100644
index 786fa23..0000000
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+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-7031754f-5bb6-3594-8a32-0c03256cdf61.json b/test/data/enm/nanoparticle-NWKI-7031754f-5bb6-3594-8a32-0c03256cdf61.json
deleted file mode 100644
index 63f29d8..0000000
--- a/test/data/enm/nanoparticle-NWKI-7031754f-5bb6-3594-8a32-0c03256cdf61.json
+++ /dev/null
@@ -1,84 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-705f070c-0c34-3638-803b-c5e85749bf53.json b/test/data/enm/nanoparticle-NWKI-705f070c-0c34-3638-803b-c5e85749bf53.json
deleted file mode 100644
index b4e5d66..0000000
--- a/test/data/enm/nanoparticle-NWKI-705f070c-0c34-3638-803b-c5e85749bf53.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-70e8dac6-42a3-36ed-8fa3-19ffbc3bb69f.json b/test/data/enm/nanoparticle-NWKI-70e8dac6-42a3-36ed-8fa3-19ffbc3bb69f.json
deleted file mode 100644
index e92faf6..0000000
--- a/test/data/enm/nanoparticle-NWKI-70e8dac6-42a3-36ed-8fa3-19ffbc3bb69f.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-71060af4-1613-35cf-95ee-2a039be0388a.json b/test/data/enm/nanoparticle-NWKI-71060af4-1613-35cf-95ee-2a039be0388a.json
deleted file mode 100644
index 43a9a43..0000000
--- a/test/data/enm/nanoparticle-NWKI-71060af4-1613-35cf-95ee-2a039be0388a.json
+++ /dev/null
@@ -1,83 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-7181cc57-548a-3117-b59a-bfff2933c0b5.json b/test/data/enm/nanoparticle-NWKI-7181cc57-548a-3117-b59a-bfff2933c0b5.json
deleted file mode 100644
index bcce41f..0000000
--- a/test/data/enm/nanoparticle-NWKI-7181cc57-548a-3117-b59a-bfff2933c0b5.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863.json b/test/data/enm/nanoparticle-NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863.json
deleted file mode 100644
index 49244f9..0000000
--- a/test/data/enm/nanoparticle-NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863.json
+++ /dev/null
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deleted file mode 100644
index b1182a2..0000000
--- a/test/data/enm/nanoparticle-NWKI-743f46ab-ca20-3f60-a14f-1695430eae68.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-74c6a1ca-f415-3c86-9437-446299eb5e40.json b/test/data/enm/nanoparticle-NWKI-74c6a1ca-f415-3c86-9437-446299eb5e40.json
deleted file mode 100644
index f34371f..0000000
--- a/test/data/enm/nanoparticle-NWKI-74c6a1ca-f415-3c86-9437-446299eb5e40.json
+++ /dev/null
@@ -1,84 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-758c06ae-dc1f-3cbe-a409-91d14e5113d1.json b/test/data/enm/nanoparticle-NWKI-758c06ae-dc1f-3cbe-a409-91d14e5113d1.json
deleted file mode 100644
index 79af3e7..0000000
--- a/test/data/enm/nanoparticle-NWKI-758c06ae-dc1f-3cbe-a409-91d14e5113d1.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-7680f6c2-68d8-3ee4-b84b-8107da3f6e19.json b/test/data/enm/nanoparticle-NWKI-7680f6c2-68d8-3ee4-b84b-8107da3f6e19.json
deleted file mode 100644
index 5cdecc5..0000000
--- a/test/data/enm/nanoparticle-NWKI-7680f6c2-68d8-3ee4-b84b-8107da3f6e19.json
+++ /dev/null
@@ -1,143 +0,0 @@
-{
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deleted file mode 100644
index 854fad4..0000000
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deleted file mode 100644
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diff --git a/test/data/enm/nanoparticle-NWKI-77fb742b-c676-3ad7-bd19-6d5ec1df62ad.json b/test/data/enm/nanoparticle-NWKI-77fb742b-c676-3ad7-bd19-6d5ec1df62ad.json
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index b8a45af..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-78f103d7-ca6c-3515-acdf-c504d48c96f9.json b/test/data/enm/nanoparticle-NWKI-78f103d7-ca6c-3515-acdf-c504d48c96f9.json
deleted file mode 100644
index 1175cee..0000000
--- a/test/data/enm/nanoparticle-NWKI-78f103d7-ca6c-3515-acdf-c504d48c96f9.json
+++ /dev/null
@@ -1,26 +0,0 @@
-{
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- "https://data.enanomapper.net/identifier/uuid": "NWKI-78f103d7-ca6c-3515-acdf-c504d48c96f9",
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diff --git a/test/data/enm/nanoparticle-NWKI-7933a5a8-7ca0-34e3-8a7d-6f93d3df09a7.json b/test/data/enm/nanoparticle-NWKI-7933a5a8-7ca0-34e3-8a7d-6f93d3df09a7.json
deleted file mode 100644
index 1c67ee4..0000000
--- a/test/data/enm/nanoparticle-NWKI-7933a5a8-7ca0-34e3-8a7d-6f93d3df09a7.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
- "compound": {
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diff --git a/test/data/enm/nanoparticle-NWKI-7998492c-3902-3cc2-9f92-cdfae53cfc02.json b/test/data/enm/nanoparticle-NWKI-7998492c-3902-3cc2-9f92-cdfae53cfc02.json
deleted file mode 100644
index f911de5..0000000
--- a/test/data/enm/nanoparticle-NWKI-7998492c-3902-3cc2-9f92-cdfae53cfc02.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-7a8cde87-8021-3d12-9dfe-f408dfe81a74.json b/test/data/enm/nanoparticle-NWKI-7a8cde87-8021-3d12-9dfe-f408dfe81a74.json
deleted file mode 100644
index f544c95..0000000
--- a/test/data/enm/nanoparticle-NWKI-7a8cde87-8021-3d12-9dfe-f408dfe81a74.json
+++ /dev/null
@@ -1,84 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-7b1cbdc8-c450-3753-a5a5-f9bacfc9382e.json b/test/data/enm/nanoparticle-NWKI-7b1cbdc8-c450-3753-a5a5-f9bacfc9382e.json
deleted file mode 100644
index 4687826..0000000
--- a/test/data/enm/nanoparticle-NWKI-7b1cbdc8-c450-3753-a5a5-f9bacfc9382e.json
+++ /dev/null
@@ -1,26 +0,0 @@
-{
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- "https://data.enanomapper.net/identifier/tradename": "JRCNM04003a",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-7b1cbdc8-c450-3753-a5a5-f9bacfc9382e",
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diff --git a/test/data/enm/nanoparticle-NWKI-7b6aae8a-bc39-3794-8140-8d409630c8bc.json b/test/data/enm/nanoparticle-NWKI-7b6aae8a-bc39-3794-8140-8d409630c8bc.json
deleted file mode 100644
index 2969349..0000000
--- a/test/data/enm/nanoparticle-NWKI-7b6aae8a-bc39-3794-8140-8d409630c8bc.json
+++ /dev/null
@@ -1,84 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-7cbc5266-5c2e-3821-a80a-5d6a63140d83.json b/test/data/enm/nanoparticle-NWKI-7cbc5266-5c2e-3821-a80a-5d6a63140d83.json
deleted file mode 100644
index 305dd20..0000000
--- a/test/data/enm/nanoparticle-NWKI-7cbc5266-5c2e-3821-a80a-5d6a63140d83.json
+++ /dev/null
@@ -1,84 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-7d4e9d59-fb38-37b9-99ec-b150ed7ce133.json b/test/data/enm/nanoparticle-NWKI-7d4e9d59-fb38-37b9-99ec-b150ed7ce133.json
deleted file mode 100644
index dcf2710..0000000
--- a/test/data/enm/nanoparticle-NWKI-7d4e9d59-fb38-37b9-99ec-b150ed7ce133.json
+++ /dev/null
@@ -1,143 +0,0 @@
-{
- "compound": {
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- "structype": "NA",
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diff --git a/test/data/enm/nanoparticle-NWKI-7ec086b4-bfe8-3246-9c6c-b3565770315b.json b/test/data/enm/nanoparticle-NWKI-7ec086b4-bfe8-3246-9c6c-b3565770315b.json
deleted file mode 100644
index 5a80ec2..0000000
--- a/test/data/enm/nanoparticle-NWKI-7ec086b4-bfe8-3246-9c6c-b3565770315b.json
+++ /dev/null
@@ -1,83 +0,0 @@
-{
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- "structype": "NA",
- "metric": null,
- "name": "",
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- "einecs": ""
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- "values": {
- "https://data.enanomapper.net/identifier/name": "JRCNM62002a",
- "https://data.enanomapper.net/identifier/tradename": "JRCNM62002a",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-7ec086b4-bfe8-3246-9c6c-b3565770315b",
- "https://data.enanomapper.net/owner/name": "NanoWiki",
- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/PARTICLE+SIZE/1BA3811ABDEA06BCCDBE29D2BBF8289121658065/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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diff --git a/test/data/enm/nanoparticle-NWKI-7efe542f-264c-3b57-a516-410b730df963.json b/test/data/enm/nanoparticle-NWKI-7efe542f-264c-3b57-a516-410b730df963.json
deleted file mode 100644
index 69b6b4b..0000000
--- a/test/data/enm/nanoparticle-NWKI-7efe542f-264c-3b57-a516-410b730df963.json
+++ /dev/null
@@ -1,91 +0,0 @@
-{
- "compound": {
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- "structype": "NA",
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- "https://data.enanomapper.net/owner/name": "NanoWiki",
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diff --git a/test/data/enm/nanoparticle-NWKI-7fca9f1b-fb2a-3fa5-a080-21391413787d.json b/test/data/enm/nanoparticle-NWKI-7fca9f1b-fb2a-3fa5-a080-21391413787d.json
deleted file mode 100644
index f9ad4b2..0000000
--- a/test/data/enm/nanoparticle-NWKI-7fca9f1b-fb2a-3fa5-a080-21391413787d.json
+++ /dev/null
@@ -1,143 +0,0 @@
-{
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- "metric": null,
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- "values": {
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diff --git a/test/data/enm/nanoparticle-NWKI-80364e0e-be06-3645-a3ae-880ae0edddef.json b/test/data/enm/nanoparticle-NWKI-80364e0e-be06-3645-a3ae-880ae0edddef.json
deleted file mode 100644
index e017e73..0000000
--- a/test/data/enm/nanoparticle-NWKI-80364e0e-be06-3645-a3ae-880ae0edddef.json
+++ /dev/null
@@ -1,88 +0,0 @@
-{
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- "structype": "NA",
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- },
- "values": {
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- "https://data.enanomapper.net/identifier/uuid": "NWKI-80364e0e-be06-3645-a3ae-880ae0edddef",
- "https://data.enanomapper.net/owner/name": "NanoWiki",
- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/PARTICLE+SIZE/1BA3811ABDEA06BCCDBE29D2BBF8289121658065/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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- "values": {
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diff --git a/test/data/enm/nanoparticle-NWKI-8090df08-f0f9-3c2f-8769-b51c2adaffc1.json b/test/data/enm/nanoparticle-NWKI-8090df08-f0f9-3c2f-8769-b51c2adaffc1.json
deleted file mode 100644
index b4d13b0..0000000
--- a/test/data/enm/nanoparticle-NWKI-8090df08-f0f9-3c2f-8769-b51c2adaffc1.json
+++ /dev/null
@@ -1,36 +0,0 @@
-{
- "compound": {
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diff --git a/test/data/enm/nanoparticle-NWKI-80f9ab46-f8fe-36de-9335-17c9d1dbdba5.json b/test/data/enm/nanoparticle-NWKI-80f9ab46-f8fe-36de-9335-17c9d1dbdba5.json
deleted file mode 100644
index daadb54..0000000
--- a/test/data/enm/nanoparticle-NWKI-80f9ab46-f8fe-36de-9335-17c9d1dbdba5.json
+++ /dev/null
@@ -1,26 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-812e122b-8bee-350d-8aea-aaaa88ce84dd.json b/test/data/enm/nanoparticle-NWKI-812e122b-8bee-350d-8aea-aaaa88ce84dd.json
deleted file mode 100644
index 26be738..0000000
--- a/test/data/enm/nanoparticle-NWKI-812e122b-8bee-350d-8aea-aaaa88ce84dd.json
+++ /dev/null
@@ -1,128 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-81530e3f-ef6c-3120-95d4-6ce9f95cfef3.json b/test/data/enm/nanoparticle-NWKI-81530e3f-ef6c-3120-95d4-6ce9f95cfef3.json
deleted file mode 100644
index fe5831b..0000000
--- a/test/data/enm/nanoparticle-NWKI-81530e3f-ef6c-3120-95d4-6ce9f95cfef3.json
+++ /dev/null
@@ -1,79 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-8196e92b-c46d-3c14-9410-e87992810710.json b/test/data/enm/nanoparticle-NWKI-8196e92b-c46d-3c14-9410-e87992810710.json
deleted file mode 100644
index 72f9d93..0000000
--- a/test/data/enm/nanoparticle-NWKI-8196e92b-c46d-3c14-9410-e87992810710.json
+++ /dev/null
@@ -1,206 +0,0 @@
-{
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deleted file mode 100644
index b782ef8..0000000
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deleted file mode 100644
index 0e2083c..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-826f2dfd-65cc-3530-9acc-6e2fc03afa83.json b/test/data/enm/nanoparticle-NWKI-826f2dfd-65cc-3530-9acc-6e2fc03afa83.json
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diff --git a/test/data/enm/nanoparticle-NWKI-82b3c4c4-a4a0-335a-b50e-d85af34a8e94.json b/test/data/enm/nanoparticle-NWKI-82b3c4c4-a4a0-335a-b50e-d85af34a8e94.json
deleted file mode 100644
index 93828bf..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-82bed004-9895-3bdf-822f-0b9906d2ee06.json b/test/data/enm/nanoparticle-NWKI-82bed004-9895-3bdf-822f-0b9906d2ee06.json
deleted file mode 100644
index d8a1e0a..0000000
--- a/test/data/enm/nanoparticle-NWKI-82bed004-9895-3bdf-822f-0b9906d2ee06.json
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diff --git a/test/data/enm/nanoparticle-NWKI-82c12809-d7af-3061-a531-1db744c521f0.json b/test/data/enm/nanoparticle-NWKI-82c12809-d7af-3061-a531-1db744c521f0.json
deleted file mode 100644
index e223bba..0000000
--- a/test/data/enm/nanoparticle-NWKI-82c12809-d7af-3061-a531-1db744c521f0.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-82c8feb3-2e93-3b65-9e66-359599257c6f.json b/test/data/enm/nanoparticle-NWKI-82c8feb3-2e93-3b65-9e66-359599257c6f.json
deleted file mode 100644
index ccb2794..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-83a75181-9103-3ef9-aec7-fa38074580f6.json b/test/data/enm/nanoparticle-NWKI-83a75181-9103-3ef9-aec7-fa38074580f6.json
deleted file mode 100644
index b738ab9..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-845bf8fc-788d-38f2-be58-030f27c0d337.json b/test/data/enm/nanoparticle-NWKI-845bf8fc-788d-38f2-be58-030f27c0d337.json
deleted file mode 100644
index a24e2e3..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-85b50517-fdea-3aa6-abbd-dd506393aaa5.json b/test/data/enm/nanoparticle-NWKI-85b50517-fdea-3aa6-abbd-dd506393aaa5.json
deleted file mode 100644
index c8e35f3..0000000
--- a/test/data/enm/nanoparticle-NWKI-85b50517-fdea-3aa6-abbd-dd506393aaa5.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-863267cf-faf0-349b-8046-6074d2e718b5.json b/test/data/enm/nanoparticle-NWKI-863267cf-faf0-349b-8046-6074d2e718b5.json
deleted file mode 100644
index b6330e8..0000000
--- a/test/data/enm/nanoparticle-NWKI-863267cf-faf0-349b-8046-6074d2e718b5.json
+++ /dev/null
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deleted file mode 100644
index f0bb281..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-86b21444-5403-3e29-b117-e09ef92cca2a.json b/test/data/enm/nanoparticle-NWKI-86b21444-5403-3e29-b117-e09ef92cca2a.json
deleted file mode 100644
index 19433df..0000000
--- a/test/data/enm/nanoparticle-NWKI-86b21444-5403-3e29-b117-e09ef92cca2a.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-87ea353c-86af-30ef-8824-78bfb4574e03.json b/test/data/enm/nanoparticle-NWKI-87ea353c-86af-30ef-8824-78bfb4574e03.json
deleted file mode 100644
index c5d1181..0000000
--- a/test/data/enm/nanoparticle-NWKI-87ea353c-86af-30ef-8824-78bfb4574e03.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-88767671-5631-3c93-8cfc-db0f48978e77.json b/test/data/enm/nanoparticle-NWKI-88767671-5631-3c93-8cfc-db0f48978e77.json
deleted file mode 100644
index 85f8bb0..0000000
--- a/test/data/enm/nanoparticle-NWKI-88767671-5631-3c93-8cfc-db0f48978e77.json
+++ /dev/null
@@ -1,94 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-895a506b-c331-3576-bf9e-cbcde5822c11.json b/test/data/enm/nanoparticle-NWKI-895a506b-c331-3576-bf9e-cbcde5822c11.json
deleted file mode 100644
index 7c7bea2..0000000
--- a/test/data/enm/nanoparticle-NWKI-895a506b-c331-3576-bf9e-cbcde5822c11.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-8a4b3e23-3327-3421-b20a-2e71939b44b1.json b/test/data/enm/nanoparticle-NWKI-8a4b3e23-3327-3421-b20a-2e71939b44b1.json
deleted file mode 100644
index 26214a2..0000000
--- a/test/data/enm/nanoparticle-NWKI-8a4b3e23-3327-3421-b20a-2e71939b44b1.json
+++ /dev/null
@@ -1,256 +0,0 @@
-{
- "compound": {
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- "structype": "NA",
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- "name": "",
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- "https://data.enanomapper.net/identifier/name": "CLIO-GLU-FITC",
- "https://data.enanomapper.net/identifier/tradename": "Shaw51 17",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-8a4b3e23-3327-3421-b20a-2e71939b44b1",
- "https://data.enanomapper.net/owner/name": "NanoWiki",
- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/PARTICLE+SIZE/1BA3811ABDEA06BCCDBE29D2BBF8289121658065/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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- "https://data.enanomapper.net/property/P-CHEM/SURFACE_CHEMISTRY_SECTION/ATOMIC+COMPOSITION/34B336573C015AF89068B6685256FD68F1DF39B4/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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- "https://data.enanomapper.net/property/P-CHEM/ZETA_POTENTIAL_SECTION/ZETA+POTENTIAL/F8DBAC907D2F4C828B3190179059ACFF4C5A93A7/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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- },
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- },
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- "name": "",
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- },
- "values": {
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- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23IUCLID5_UUIDDefault": "NWKI-05b88560-3625-3ef3-bf27-d9109dd915e4",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23ChemicalNameDefault": "Glutamic_Acid",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23TradeNameDefault": "CLIO-2DFITC-2DGlutamicAcid"
- },
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- "compositionUUID": "NWKI-8a4b3e23-3327-3421-b20a-2e71939b44b1",
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diff --git a/test/data/enm/nanoparticle-NWKI-8a968835-50ab-33df-bf5e-42de32d01c15.json b/test/data/enm/nanoparticle-NWKI-8a968835-50ab-33df-bf5e-42de32d01c15.json
deleted file mode 100644
index 401f106..0000000
--- a/test/data/enm/nanoparticle-NWKI-8a968835-50ab-33df-bf5e-42de32d01c15.json
+++ /dev/null
@@ -1,123 +0,0 @@
-{
- "compound": {
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- "structype": "NA",
- "metric": null,
- "name": "",
- "cas": "",
- "einecs": ""
- },
- "values": {
- "https://data.enanomapper.net/identifier/name": "ASP30 with corona",
- "https://data.enanomapper.net/identifier/tradename": "Docter2014 M2 withPC",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-8a968835-50ab-33df-bf5e-42de32d01c15",
- "https://data.enanomapper.net/owner/name": "NanoWiki",
- "https://data.enanomapper.net/property/TOX/BAO_0003009_SECTION/Percentage_Viable_Cells/50C40B71718849138148AA80E20FC5AE8CF3ECFB/NOTSPECIFIED/688f02ab-b381-3048-a56c-e432893623b2": [
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- "https://data.enanomapper.net/property/TOX/BAO_0003009_SECTION/Percentage_Viable_Cells/1918881EAE86C21F47D0283140BB16CEEB997530/NOTSPECIFIED/688f02ab-b381-3048-a56c-e432893623b2": [
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- }
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- "https://data.enanomapper.net/property/TOX/BAO_0003009_SECTION/Percentage_Viable_Cells/D5766076B1EE353AC21FA85EB583EF6AB19855B1/NOTSPECIFIED/688f02ab-b381-3048-a56c-e432893623b2": [
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- }
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- "https://data.enanomapper.net/property/TOX/BAO_0003009_SECTION/Percentage_Viable_Cells/D51F5E4B92FC1AAC2B589494422295F747897132/NOTSPECIFIED/688f02ab-b381-3048-a56c-e432893623b2": [
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- "https://data.enanomapper.net/property/TOX/BAO_0003009_SECTION/Percentage_Viable_Cells/0CF003881C042A3A478E507810669381C5AAAAA2/NOTSPECIFIED/688f02ab-b381-3048-a56c-e432893623b2": [
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- "https://data.enanomapper.net/property/TOX/BAO_0003009_SECTION/Percentage_Viable_Cells/D6515E489DE3DFCF7CBD55D6FE0C73C9ACF85EF7/NOTSPECIFIED/688f02ab-b381-3048-a56c-e432893623b2": [
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- "https://data.enanomapper.net/property/TOX/BAO_0003009_SECTION/Percentage_Viable_Cells/2DE443907F42C7C083733D12EF7AA6CC1955F344/NOTSPECIFIED/688f02ab-b381-3048-a56c-e432893623b2": [
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- }
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- },
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- "metric": null,
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- "einecs": ""
- },
- "values": {
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- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23CASRNDefault": "7631-86-9"
- },
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diff --git a/test/data/enm/nanoparticle-NWKI-8b5ebb0a-d062-335d-a497-a42447031e08.json b/test/data/enm/nanoparticle-NWKI-8b5ebb0a-d062-335d-a497-a42447031e08.json
deleted file mode 100644
index 58cd08c..0000000
--- a/test/data/enm/nanoparticle-NWKI-8b5ebb0a-d062-335d-a497-a42447031e08.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
- "compound": {
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- "structype": "NA",
- "metric": null,
- "name": "",
- "cas": "",
- "einecs": ""
- },
- "values": {
- "https://data.enanomapper.net/identifier/name": "82",
- "https://data.enanomapper.net/identifier/tradename": "Zhou2008 M78",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-8b5ebb0a-d062-335d-a497-a42447031e08",
- "https://data.enanomapper.net/owner/name": "NanoWiki"
- },
- "facets": [
-
- ],
- "composition": [
- {
- "substance": {
- "URI": "https://data.enanomapper.net/substance/NWKI-8b5ebb0a-d062-335d-a497-a42447031e08"
- },
- "component": {
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- "name": "",
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- "values": {
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- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23ChemicalNameDefault": "C",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23CASRNDefault": "308068-56-6",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23EINECSDefault": "936-414-1"
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- "compositionUUID": "NWKI-8b5ebb0a-d062-335d-a497-a42447031e08",
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diff --git a/test/data/enm/nanoparticle-NWKI-8ba8821c-f8b6-3524-9830-d02196a244e6.json b/test/data/enm/nanoparticle-NWKI-8ba8821c-f8b6-3524-9830-d02196a244e6.json
deleted file mode 100644
index 911690e..0000000
--- a/test/data/enm/nanoparticle-NWKI-8ba8821c-f8b6-3524-9830-d02196a244e6.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-8c5b9350-2c03-3173-9615-cabfbe6929c9.json b/test/data/enm/nanoparticle-NWKI-8c5b9350-2c03-3173-9615-cabfbe6929c9.json
deleted file mode 100644
index ff42e8f..0000000
--- a/test/data/enm/nanoparticle-NWKI-8c5b9350-2c03-3173-9615-cabfbe6929c9.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-8cd70c1c-17a4-3aec-8b1d-fb02c67866c8.json b/test/data/enm/nanoparticle-NWKI-8cd70c1c-17a4-3aec-8b1d-fb02c67866c8.json
deleted file mode 100644
index 6d17952..0000000
--- a/test/data/enm/nanoparticle-NWKI-8cd70c1c-17a4-3aec-8b1d-fb02c67866c8.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-8ef21404-e101-37c8-8206-32f526d75012.json b/test/data/enm/nanoparticle-NWKI-8ef21404-e101-37c8-8206-32f526d75012.json
deleted file mode 100644
index 51bd2d1..0000000
--- a/test/data/enm/nanoparticle-NWKI-8ef21404-e101-37c8-8206-32f526d75012.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-8f43d9fb-94ae-3d2b-8bb6-e8eb060e3b1b.json b/test/data/enm/nanoparticle-NWKI-8f43d9fb-94ae-3d2b-8bb6-e8eb060e3b1b.json
deleted file mode 100644
index b41e5ce..0000000
--- a/test/data/enm/nanoparticle-NWKI-8f43d9fb-94ae-3d2b-8bb6-e8eb060e3b1b.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-8f4d47b7-8481-3d9a-9534-ec5144e705e1.json b/test/data/enm/nanoparticle-NWKI-8f4d47b7-8481-3d9a-9534-ec5144e705e1.json
deleted file mode 100644
index 7c85583..0000000
--- a/test/data/enm/nanoparticle-NWKI-8f4d47b7-8481-3d9a-9534-ec5144e705e1.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-8f7f774c-d727-33a9-adc6-9068524faf1c.json b/test/data/enm/nanoparticle-NWKI-8f7f774c-d727-33a9-adc6-9068524faf1c.json
deleted file mode 100644
index afb6ab0..0000000
--- a/test/data/enm/nanoparticle-NWKI-8f7f774c-d727-33a9-adc6-9068524faf1c.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-905e44ef-3f7f-314d-add0-3e00439eaded.json b/test/data/enm/nanoparticle-NWKI-905e44ef-3f7f-314d-add0-3e00439eaded.json
deleted file mode 100644
index 4569842..0000000
--- a/test/data/enm/nanoparticle-NWKI-905e44ef-3f7f-314d-add0-3e00439eaded.json
+++ /dev/null
@@ -1,93 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-90869553-c8fe-3ef6-8e68-47f392958127.json b/test/data/enm/nanoparticle-NWKI-90869553-c8fe-3ef6-8e68-47f392958127.json
deleted file mode 100644
index b0a66df..0000000
--- a/test/data/enm/nanoparticle-NWKI-90869553-c8fe-3ef6-8e68-47f392958127.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-9142c528-4a84-3566-b678-dc1eef7d22fe.json b/test/data/enm/nanoparticle-NWKI-9142c528-4a84-3566-b678-dc1eef7d22fe.json
deleted file mode 100644
index 9e2ddde..0000000
--- a/test/data/enm/nanoparticle-NWKI-9142c528-4a84-3566-b678-dc1eef7d22fe.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-916751bb-8457-3844-87c0-ada4c6afd1ab.json b/test/data/enm/nanoparticle-NWKI-916751bb-8457-3844-87c0-ada4c6afd1ab.json
deleted file mode 100644
index 197739f..0000000
--- a/test/data/enm/nanoparticle-NWKI-916751bb-8457-3844-87c0-ada4c6afd1ab.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-92e20781-9c38-3c12-a311-14eab1e776fa.json b/test/data/enm/nanoparticle-NWKI-92e20781-9c38-3c12-a311-14eab1e776fa.json
deleted file mode 100644
index febd112..0000000
--- a/test/data/enm/nanoparticle-NWKI-92e20781-9c38-3c12-a311-14eab1e776fa.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-959963fd-df22-35fb-b821-dd3d74dd40ce.json b/test/data/enm/nanoparticle-NWKI-959963fd-df22-35fb-b821-dd3d74dd40ce.json
deleted file mode 100644
index 7295ed2..0000000
--- a/test/data/enm/nanoparticle-NWKI-959963fd-df22-35fb-b821-dd3d74dd40ce.json
+++ /dev/null
@@ -1,83 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-95bb8173-3aad-3441-a50e-97e62401eadb.json b/test/data/enm/nanoparticle-NWKI-95bb8173-3aad-3441-a50e-97e62401eadb.json
deleted file mode 100644
index b9671f8..0000000
--- a/test/data/enm/nanoparticle-NWKI-95bb8173-3aad-3441-a50e-97e62401eadb.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-97103918-5eeb-36a3-9981-3aa6dcef5d4c.json b/test/data/enm/nanoparticle-NWKI-97103918-5eeb-36a3-9981-3aa6dcef5d4c.json
deleted file mode 100644
index ab5f44c..0000000
--- a/test/data/enm/nanoparticle-NWKI-97103918-5eeb-36a3-9981-3aa6dcef5d4c.json
+++ /dev/null
@@ -1,127 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-97a6970a-0e83-3890-ae6e-5e83b99c0325.json b/test/data/enm/nanoparticle-NWKI-97a6970a-0e83-3890-ae6e-5e83b99c0325.json
deleted file mode 100644
index da738fb..0000000
--- a/test/data/enm/nanoparticle-NWKI-97a6970a-0e83-3890-ae6e-5e83b99c0325.json
+++ /dev/null
@@ -1,83 +0,0 @@
-{
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- "structype": "NA",
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- "https://data.enanomapper.net/identifier/tradename": "JRCNM62001a",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-97a6970a-0e83-3890-ae6e-5e83b99c0325",
- "https://data.enanomapper.net/owner/name": "NanoWiki",
- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/PARTICLE+SIZE/1BA3811ABDEA06BCCDBE29D2BBF8289121658065/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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diff --git a/test/data/enm/nanoparticle-NWKI-984a9c7f-2372-3b8f-9ff5-93a9f94f2eb7.json b/test/data/enm/nanoparticle-NWKI-984a9c7f-2372-3b8f-9ff5-93a9f94f2eb7.json
deleted file mode 100644
index 48c2b35..0000000
--- a/test/data/enm/nanoparticle-NWKI-984a9c7f-2372-3b8f-9ff5-93a9f94f2eb7.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
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- "metric": null,
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diff --git a/test/data/enm/nanoparticle-NWKI-994226ce-df01-3717-b45d-376f645a8d47.json b/test/data/enm/nanoparticle-NWKI-994226ce-df01-3717-b45d-376f645a8d47.json
deleted file mode 100644
index d146d3f..0000000
--- a/test/data/enm/nanoparticle-NWKI-994226ce-df01-3717-b45d-376f645a8d47.json
+++ /dev/null
@@ -1,94 +0,0 @@
-{
- "compound": {
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- "structype": "NA",
- "metric": null,
- "name": "",
- "cas": "",
- "einecs": ""
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- "values": {
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- "https://data.enanomapper.net/identifier/tradename": "Cytotox2011Puzyn03",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-994226ce-df01-3717-b45d-376f645a8d47",
- "https://data.enanomapper.net/owner/name": "NanoWiki",
- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/PARTICLE+SIZE/1BA3811ABDEA06BCCDBE29D2BBF8289121658065/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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diff --git a/test/data/enm/nanoparticle-NWKI-99ad0a8c-1c4b-3270-8a4b-7dab013e5fe8.json b/test/data/enm/nanoparticle-NWKI-99ad0a8c-1c4b-3270-8a4b-7dab013e5fe8.json
deleted file mode 100644
index 5f2c293..0000000
--- a/test/data/enm/nanoparticle-NWKI-99ad0a8c-1c4b-3270-8a4b-7dab013e5fe8.json
+++ /dev/null
@@ -1,83 +0,0 @@
-{
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- "structype": "NA",
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- "https://data.enanomapper.net/identifier/uuid": "NWKI-99ad0a8c-1c4b-3270-8a4b-7dab013e5fe8",
- "https://data.enanomapper.net/owner/name": "NanoWiki",
- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/PARTICLE+SIZE/1BA3811ABDEA06BCCDBE29D2BBF8289121658065/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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diff --git a/test/data/enm/nanoparticle-NWKI-99fe068d-e343-35f8-9cc9-06c3a3cf8e22.json b/test/data/enm/nanoparticle-NWKI-99fe068d-e343-35f8-9cc9-06c3a3cf8e22.json
deleted file mode 100644
index 2d836f5..0000000
--- a/test/data/enm/nanoparticle-NWKI-99fe068d-e343-35f8-9cc9-06c3a3cf8e22.json
+++ /dev/null
@@ -1,83 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-9a0a7a86-fd00-3835-9795-a4da7d9d1544.json b/test/data/enm/nanoparticle-NWKI-9a0a7a86-fd00-3835-9795-a4da7d9d1544.json
deleted file mode 100644
index 106776d..0000000
--- a/test/data/enm/nanoparticle-NWKI-9a0a7a86-fd00-3835-9795-a4da7d9d1544.json
+++ /dev/null
@@ -1,201 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-9a13f473-8a29-32e4-9653-ec03f5fb8923.json b/test/data/enm/nanoparticle-NWKI-9a13f473-8a29-32e4-9653-ec03f5fb8923.json
deleted file mode 100644
index 3d8740f..0000000
--- a/test/data/enm/nanoparticle-NWKI-9a13f473-8a29-32e4-9653-ec03f5fb8923.json
+++ /dev/null
@@ -1,196 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-9a41ca03-303d-3116-89fb-2335cc1bad2d.json b/test/data/enm/nanoparticle-NWKI-9a41ca03-303d-3116-89fb-2335cc1bad2d.json
deleted file mode 100644
index 9fad37a..0000000
--- a/test/data/enm/nanoparticle-NWKI-9a41ca03-303d-3116-89fb-2335cc1bad2d.json
+++ /dev/null
@@ -1,94 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-9fb12a3a-3a26-3f95-82ed-371f58d92dfe.json b/test/data/enm/nanoparticle-NWKI-9fb12a3a-3a26-3f95-82ed-371f58d92dfe.json
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diff --git a/test/data/enm/nanoparticle-NWKI-a03a76c5-85b2-3b10-b567-87ca006c15ac.json b/test/data/enm/nanoparticle-NWKI-a03a76c5-85b2-3b10-b567-87ca006c15ac.json
deleted file mode 100644
index 47d9d0e..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-a28e83ea-54da-3391-9bca-4a8891680403.json b/test/data/enm/nanoparticle-NWKI-a28e83ea-54da-3391-9bca-4a8891680403.json
deleted file mode 100644
index 4e6f04a..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-a2d5a729-4ed1-3f1b-a5fd-3bd090a48aa5.json b/test/data/enm/nanoparticle-NWKI-a2d5a729-4ed1-3f1b-a5fd-3bd090a48aa5.json
deleted file mode 100644
index cc2d067..0000000
--- a/test/data/enm/nanoparticle-NWKI-a2d5a729-4ed1-3f1b-a5fd-3bd090a48aa5.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "compound": {
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- "https://data.enanomapper.net/identifier/uuid": "NWKI-a2d5a729-4ed1-3f1b-a5fd-3bd090a48aa5",
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- "https://data.enanomapper.net/property/P-CHEM/ZETA_POTENTIAL_SECTION/ZETA+POTENTIAL/E0E6CC091756300C4F9AC1CF0CEEAB5655DB567C/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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diff --git a/test/data/enm/nanoparticle-NWKI-a32cb420-7aa2-3130-9612-edfe833d83fc.json b/test/data/enm/nanoparticle-NWKI-a32cb420-7aa2-3130-9612-edfe833d83fc.json
deleted file mode 100644
index 720ead8..0000000
--- a/test/data/enm/nanoparticle-NWKI-a32cb420-7aa2-3130-9612-edfe833d83fc.json
+++ /dev/null
@@ -1,95 +0,0 @@
-{
- "compound": {
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- "structype": "NA",
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- "https://data.enanomapper.net/identifier/uuid": "NWKI-a32cb420-7aa2-3130-9612-edfe833d83fc",
- "https://data.enanomapper.net/owner/name": "NanoWiki",
- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/PARTICLE+SIZE/1BA3811ABDEA06BCCDBE29D2BBF8289121658065/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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diff --git a/test/data/enm/nanoparticle-NWKI-a33b26f0-2fc7-3aa1-9dd6-27380f725bfe.json b/test/data/enm/nanoparticle-NWKI-a33b26f0-2fc7-3aa1-9dd6-27380f725bfe.json
deleted file mode 100644
index ff930e4..0000000
--- a/test/data/enm/nanoparticle-NWKI-a33b26f0-2fc7-3aa1-9dd6-27380f725bfe.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
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- "structype": "NA",
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- "https://data.enanomapper.net/identifier/uuid": "NWKI-a33b26f0-2fc7-3aa1-9dd6-27380f725bfe",
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diff --git a/test/data/enm/nanoparticle-NWKI-a40c7554-4bd8-3938-82a9-bf9db1f7bc13.json b/test/data/enm/nanoparticle-NWKI-a40c7554-4bd8-3938-82a9-bf9db1f7bc13.json
deleted file mode 100644
index df50b87..0000000
--- a/test/data/enm/nanoparticle-NWKI-a40c7554-4bd8-3938-82a9-bf9db1f7bc13.json
+++ /dev/null
@@ -1,84 +0,0 @@
-{
- "compound": {
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- "structype": "NA",
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- "https://data.enanomapper.net/identifier/uuid": "NWKI-a40c7554-4bd8-3938-82a9-bf9db1f7bc13",
- "https://data.enanomapper.net/owner/name": "NanoWiki",
- "https://data.enanomapper.net/property/P-CHEM/ZETA_POTENTIAL_SECTION/ZETA+POTENTIAL/1216D448427E5F75DF91BCB56A149A90569DF29D/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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diff --git a/test/data/enm/nanoparticle-NWKI-a70ffcee-9967-3158-a384-765685c72a7b.json b/test/data/enm/nanoparticle-NWKI-a70ffcee-9967-3158-a384-765685c72a7b.json
deleted file mode 100644
index 48f4e28..0000000
--- a/test/data/enm/nanoparticle-NWKI-a70ffcee-9967-3158-a384-765685c72a7b.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "compound": {
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- "structype": "NA",
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- "name": "",
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- "values": {
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- "https://data.enanomapper.net/identifier/tradename": "Kim2011 NM1",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-a70ffcee-9967-3158-a384-765685c72a7b",
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diff --git a/test/data/enm/nanoparticle-NWKI-a855e2c5-73f1-32c0-8a87-aa521fd69928.json b/test/data/enm/nanoparticle-NWKI-a855e2c5-73f1-32c0-8a87-aa521fd69928.json
deleted file mode 100644
index 4a57d06..0000000
--- a/test/data/enm/nanoparticle-NWKI-a855e2c5-73f1-32c0-8a87-aa521fd69928.json
+++ /dev/null
@@ -1,83 +0,0 @@
-{
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- "https://data.enanomapper.net/identifier/uuid": "NWKI-a855e2c5-73f1-32c0-8a87-aa521fd69928",
- "https://data.enanomapper.net/owner/name": "NanoWiki",
- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/PARTICLE+SIZE/1BA3811ABDEA06BCCDBE29D2BBF8289121658065/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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diff --git a/test/data/enm/nanoparticle-NWKI-a95db64e-5499-371a-bdce-a4aa31f93218.json b/test/data/enm/nanoparticle-NWKI-a95db64e-5499-371a-bdce-a4aa31f93218.json
deleted file mode 100644
index 94fe730..0000000
--- a/test/data/enm/nanoparticle-NWKI-a95db64e-5499-371a-bdce-a4aa31f93218.json
+++ /dev/null
@@ -1,143 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-ab2d4bdd-7a72-3e26-8552-5bb6027896bb.json b/test/data/enm/nanoparticle-NWKI-ab2d4bdd-7a72-3e26-8552-5bb6027896bb.json
deleted file mode 100644
index c1b243c..0000000
--- a/test/data/enm/nanoparticle-NWKI-ab2d4bdd-7a72-3e26-8552-5bb6027896bb.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-ad1d5068-29cd-3d8c-9ed0-44ed4ce06ddd.json b/test/data/enm/nanoparticle-NWKI-ad1d5068-29cd-3d8c-9ed0-44ed4ce06ddd.json
deleted file mode 100644
index 5ea598d..0000000
--- a/test/data/enm/nanoparticle-NWKI-ad1d5068-29cd-3d8c-9ed0-44ed4ce06ddd.json
+++ /dev/null
@@ -1,201 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-ad44f58f-8080-3017-9f8d-485fad044849.json b/test/data/enm/nanoparticle-NWKI-ad44f58f-8080-3017-9f8d-485fad044849.json
deleted file mode 100644
index 585e22c..0000000
--- a/test/data/enm/nanoparticle-NWKI-ad44f58f-8080-3017-9f8d-485fad044849.json
+++ /dev/null
@@ -1,254 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-ada731e2-5e80-3cea-8a28-42e124bc110b.json b/test/data/enm/nanoparticle-NWKI-ada731e2-5e80-3cea-8a28-42e124bc110b.json
deleted file mode 100644
index b0e6f42..0000000
--- a/test/data/enm/nanoparticle-NWKI-ada731e2-5e80-3cea-8a28-42e124bc110b.json
+++ /dev/null
@@ -1,26 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-ae0be5b8-266b-3b6a-825d-55f14b51cc99.json b/test/data/enm/nanoparticle-NWKI-ae0be5b8-266b-3b6a-825d-55f14b51cc99.json
deleted file mode 100644
index d2af618..0000000
--- a/test/data/enm/nanoparticle-NWKI-ae0be5b8-266b-3b6a-825d-55f14b51cc99.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-ae63c430-7a80-35c3-828d-c859d81ce698.json b/test/data/enm/nanoparticle-NWKI-ae63c430-7a80-35c3-828d-c859d81ce698.json
deleted file mode 100644
index bbf0de3..0000000
--- a/test/data/enm/nanoparticle-NWKI-ae63c430-7a80-35c3-828d-c859d81ce698.json
+++ /dev/null
@@ -1,88 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-ae67096a-fca6-3afc-bade-c362e3eeadc8.json b/test/data/enm/nanoparticle-NWKI-ae67096a-fca6-3afc-bade-c362e3eeadc8.json
deleted file mode 100644
index 8822c6f..0000000
--- a/test/data/enm/nanoparticle-NWKI-ae67096a-fca6-3afc-bade-c362e3eeadc8.json
+++ /dev/null
@@ -1,94 +0,0 @@
-{
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deleted file mode 100644
index 5a5cf48..0000000
--- a/test/data/enm/nanoparticle-NWKI-aeeb6004-b180-3b01-a9ab-68b64e19011b.json
+++ /dev/null
@@ -1,88 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-afc33b0f-f6ce-3c1b-8a3d-cede13515323.json b/test/data/enm/nanoparticle-NWKI-afc33b0f-f6ce-3c1b-8a3d-cede13515323.json
deleted file mode 100644
index 7ef265b..0000000
--- a/test/data/enm/nanoparticle-NWKI-afc33b0f-f6ce-3c1b-8a3d-cede13515323.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-b110d018-6de0-303b-afcc-6a5e1f5911aa.json b/test/data/enm/nanoparticle-NWKI-b110d018-6de0-303b-afcc-6a5e1f5911aa.json
deleted file mode 100644
index bbf98ce..0000000
--- a/test/data/enm/nanoparticle-NWKI-b110d018-6de0-303b-afcc-6a5e1f5911aa.json
+++ /dev/null
@@ -1,96 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-b14e37d1-8dbb-36d7-925c-4093c91a0e92.json b/test/data/enm/nanoparticle-NWKI-b14e37d1-8dbb-36d7-925c-4093c91a0e92.json
deleted file mode 100644
index b0a4009..0000000
--- a/test/data/enm/nanoparticle-NWKI-b14e37d1-8dbb-36d7-925c-4093c91a0e92.json
+++ /dev/null
@@ -1,128 +0,0 @@
-{
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- "https://data.enanomapper.net/property/TOX/BAO_0003009_SECTION/Toxicity+Classifier/06523CEECED235D5ED041617E8087AC57ED845E2/NOTSPECIFIED/f8daa1d4-6a0f-323a-94a8-67272f2a67d1": [
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- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23ChemicalNameDefault": "Co3O4",
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diff --git a/test/data/enm/nanoparticle-NWKI-b19125a9-4499-3e0e-aa0c-7792401f4900.json b/test/data/enm/nanoparticle-NWKI-b19125a9-4499-3e0e-aa0c-7792401f4900.json
deleted file mode 100644
index b290a88..0000000
--- a/test/data/enm/nanoparticle-NWKI-b19125a9-4499-3e0e-aa0c-7792401f4900.json
+++ /dev/null
@@ -1,254 +0,0 @@
-{
- "compound": {
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- "structype": "NA",
- "metric": null,
- "name": "",
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- "values": {
- "https://data.enanomapper.net/identifier/name": "PNP30",
- "https://data.enanomapper.net/identifier/tradename": "Shaw51 38",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-b19125a9-4499-3e0e-aa0c-7792401f4900",
- "https://data.enanomapper.net/owner/name": "NanoWiki",
- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/PARTICLE+SIZE/1BA3811ABDEA06BCCDBE29D2BBF8289121658065/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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- "https://data.enanomapper.net/property/P-CHEM/SURFACE_CHEMISTRY_SECTION/ATOMIC+COMPOSITION/6F329893E3E7E48B645396FA27B8A2DCA31ED8EE/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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- "https://data.enanomapper.net/property/P-CHEM/SURFACE_CHEMISTRY_SECTION/ATOMIC+COMPOSITION/34B336573C015AF89068B6685256FD68F1DF39B4/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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- "https://data.enanomapper.net/property/P-CHEM/ZETA_POTENTIAL_SECTION/ZETA+POTENTIAL/F8DBAC907D2F4C828B3190179059ACFF4C5A93A7/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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- "values": {
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- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23ChemicalNameDefault": "Protamine",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23TradeNameDefault": "CLIO-2DRhodamine-2DProtamine"
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- },
- "component": {
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- "structype": "NA",
- "metric": null,
- "name": "",
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- },
- "values": {
- "https://data.enanomapper.net/identifier/uuid": "NWKI-c5bfd05b-5120-394d-89d9-67db1205f90d",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23IUCLID5_UUIDDefault": "NWKI-c5bfd05b-5120-394d-89d9-67db1205f90d",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23ChemicalNameDefault": "Rhodamine",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23TradeNameDefault": "CLIO-2DRhodamine-2DProtamine"
- },
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diff --git a/test/data/enm/nanoparticle-NWKI-b1c24867-234d-3404-8582-b5b8ae5e8b71.json b/test/data/enm/nanoparticle-NWKI-b1c24867-234d-3404-8582-b5b8ae5e8b71.json
deleted file mode 100644
index dd7e7c7..0000000
--- a/test/data/enm/nanoparticle-NWKI-b1c24867-234d-3404-8582-b5b8ae5e8b71.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
- "compound": {
- "URI": "https://data.enanomapper.net/substance/NWKI-b1c24867-234d-3404-8582-b5b8ae5e8b71",
- "structype": "NA",
- "metric": null,
- "name": "",
- "cas": "",
- "einecs": ""
- },
- "values": {
- "https://data.enanomapper.net/identifier/name": "58",
- "https://data.enanomapper.net/identifier/tradename": "Zhou2008 M54",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-b1c24867-234d-3404-8582-b5b8ae5e8b71",
- "https://data.enanomapper.net/owner/name": "NanoWiki"
- },
- "facets": [
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- ],
- "composition": [
- {
- "substance": {
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- },
- "component": {
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- "structype": "NA",
- "metric": null,
- "name": "",
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- },
- "values": {
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- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23ChemicalNameDefault": "C",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23CASRNDefault": "308068-56-6",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23EINECSDefault": "936-414-1"
- },
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diff --git a/test/data/enm/nanoparticle-NWKI-b4bd899e-c57e-3aaa-bf6f-54ec8ebd6ab5.json b/test/data/enm/nanoparticle-NWKI-b4bd899e-c57e-3aaa-bf6f-54ec8ebd6ab5.json
deleted file mode 100644
index 625c600..0000000
--- a/test/data/enm/nanoparticle-NWKI-b4bd899e-c57e-3aaa-bf6f-54ec8ebd6ab5.json
+++ /dev/null
@@ -1,84 +0,0 @@
-{
- "compound": {
- "URI": "https://data.enanomapper.net/substance/NWKI-b4bd899e-c57e-3aaa-bf6f-54ec8ebd6ab5",
- "structype": "NA",
- "metric": null,
- "name": "",
- "cas": "",
- "einecs": ""
- },
- "values": {
- "https://data.enanomapper.net/identifier/name": "ZnO",
- "https://data.enanomapper.net/identifier/tradename": "Kim2012 NM2",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-b4bd899e-c57e-3aaa-bf6f-54ec8ebd6ab5",
- "https://data.enanomapper.net/owner/name": "NanoWiki",
- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/PARTICLE+SIZE/1BA3811ABDEA06BCCDBE29D2BBF8289121658065/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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- ],
- "composition": [
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- "substance": {
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- },
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- "values": {
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- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23IUCLID5_UUIDDefault": "NWKI-96890ce5-c856-3200-82d1-ba92fec42d9f",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23ChemicalNameDefault": "ZnO",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23CASRNDefault": "1314-13-2",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23EINECSDefault": "215-222-5"
- },
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- "compositionUUID": "NWKI-b4bd899e-c57e-3aaa-bf6f-54ec8ebd6ab5",
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- "relation": "HAS_CORE",
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- "count": 1,
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- "remarks": "NanoWiki"
- }
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diff --git a/test/data/enm/nanoparticle-NWKI-b5385309-1812-33ad-a4cf-66d8d3a26bcc.json b/test/data/enm/nanoparticle-NWKI-b5385309-1812-33ad-a4cf-66d8d3a26bcc.json
deleted file mode 100644
index cca5b13..0000000
--- a/test/data/enm/nanoparticle-NWKI-b5385309-1812-33ad-a4cf-66d8d3a26bcc.json
+++ /dev/null
@@ -1,88 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-b54f582c-7bf6-3e5f-b205-063878b0d201.json b/test/data/enm/nanoparticle-NWKI-b54f582c-7bf6-3e5f-b205-063878b0d201.json
deleted file mode 100644
index bdeca8e..0000000
--- a/test/data/enm/nanoparticle-NWKI-b54f582c-7bf6-3e5f-b205-063878b0d201.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-b6c86895-1b73-39ec-8bd2-0106e77a7673.json b/test/data/enm/nanoparticle-NWKI-b6c86895-1b73-39ec-8bd2-0106e77a7673.json
deleted file mode 100644
index ef15035..0000000
--- a/test/data/enm/nanoparticle-NWKI-b6c86895-1b73-39ec-8bd2-0106e77a7673.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-b707e677-1bf5-38a5-a73b-7ab5974920ac.json b/test/data/enm/nanoparticle-NWKI-b707e677-1bf5-38a5-a73b-7ab5974920ac.json
deleted file mode 100644
index b7bfb9a..0000000
--- a/test/data/enm/nanoparticle-NWKI-b707e677-1bf5-38a5-a73b-7ab5974920ac.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-b8c38958-41a3-3ce6-98bb-aff01f6bf06f.json b/test/data/enm/nanoparticle-NWKI-b8c38958-41a3-3ce6-98bb-aff01f6bf06f.json
deleted file mode 100644
index aca6844..0000000
--- a/test/data/enm/nanoparticle-NWKI-b8c38958-41a3-3ce6-98bb-aff01f6bf06f.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-b9b41028-7011-3a92-a2fa-94834b0c1b14.json b/test/data/enm/nanoparticle-NWKI-b9b41028-7011-3a92-a2fa-94834b0c1b14.json
deleted file mode 100644
index a29184e..0000000
--- a/test/data/enm/nanoparticle-NWKI-b9b41028-7011-3a92-a2fa-94834b0c1b14.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-ba8102ef-4641-3eaf-b285-8cf149a3073b.json b/test/data/enm/nanoparticle-NWKI-ba8102ef-4641-3eaf-b285-8cf149a3073b.json
deleted file mode 100644
index 541a7e3..0000000
--- a/test/data/enm/nanoparticle-NWKI-ba8102ef-4641-3eaf-b285-8cf149a3073b.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-bb2f1a47-0260-3271-b9c3-edb850d15be9.json b/test/data/enm/nanoparticle-NWKI-bb2f1a47-0260-3271-b9c3-edb850d15be9.json
deleted file mode 100644
index 3f2b441..0000000
--- a/test/data/enm/nanoparticle-NWKI-bb2f1a47-0260-3271-b9c3-edb850d15be9.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-bb304faf-e44e-3103-b2a6-01b99c1c23de.json b/test/data/enm/nanoparticle-NWKI-bb304faf-e44e-3103-b2a6-01b99c1c23de.json
deleted file mode 100644
index f3452f7..0000000
--- a/test/data/enm/nanoparticle-NWKI-bb304faf-e44e-3103-b2a6-01b99c1c23de.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-bb97285c-a58f-34c0-aa16-d5eac02280fa.json b/test/data/enm/nanoparticle-NWKI-bb97285c-a58f-34c0-aa16-d5eac02280fa.json
deleted file mode 100644
index 38208b8..0000000
--- a/test/data/enm/nanoparticle-NWKI-bb97285c-a58f-34c0-aa16-d5eac02280fa.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-bbb67d89-eaff-38ab-ba4f-403bfb064a0c.json b/test/data/enm/nanoparticle-NWKI-bbb67d89-eaff-38ab-ba4f-403bfb064a0c.json
deleted file mode 100644
index df70c45..0000000
--- a/test/data/enm/nanoparticle-NWKI-bbb67d89-eaff-38ab-ba4f-403bfb064a0c.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-bbce341e-3e4d-37f9-a891-5462ada32180.json b/test/data/enm/nanoparticle-NWKI-bbce341e-3e4d-37f9-a891-5462ada32180.json
deleted file mode 100644
index 6fbf9e5..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-bc434442-e632-3829-be8d-64df1c9b70d3.json b/test/data/enm/nanoparticle-NWKI-bc434442-e632-3829-be8d-64df1c9b70d3.json
deleted file mode 100644
index 04f372f..0000000
--- a/test/data/enm/nanoparticle-NWKI-bc434442-e632-3829-be8d-64df1c9b70d3.json
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@@ -1,83 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-be3d8130-367b-30a5-8ca3-780e66a4c2e4.json b/test/data/enm/nanoparticle-NWKI-be3d8130-367b-30a5-8ca3-780e66a4c2e4.json
deleted file mode 100644
index ebcbb44..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-bec49753-e5ff-3f5d-96a4-69a07da2de45.json b/test/data/enm/nanoparticle-NWKI-bec49753-e5ff-3f5d-96a4-69a07da2de45.json
deleted file mode 100644
index 3a65f6d..0000000
--- a/test/data/enm/nanoparticle-NWKI-bec49753-e5ff-3f5d-96a4-69a07da2de45.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-c012600e-ca8e-31db-a7a8-d9f6a74e2464.json b/test/data/enm/nanoparticle-NWKI-c012600e-ca8e-31db-a7a8-d9f6a74e2464.json
deleted file mode 100644
index c32f4f7..0000000
--- a/test/data/enm/nanoparticle-NWKI-c012600e-ca8e-31db-a7a8-d9f6a74e2464.json
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deleted file mode 100644
index 05cff79..0000000
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-{
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deleted file mode 100644
index dfee46c..0000000
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deleted file mode 100644
index 8e04b83..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-c10e9034-a37c-37f8-afa4-b0e1081c6856.json b/test/data/enm/nanoparticle-NWKI-c10e9034-a37c-37f8-afa4-b0e1081c6856.json
deleted file mode 100644
index 7957492..0000000
--- a/test/data/enm/nanoparticle-NWKI-c10e9034-a37c-37f8-afa4-b0e1081c6856.json
+++ /dev/null
@@ -1,83 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-c2075a8a-c7f2-31df-9d04-1cb096cdfece.json b/test/data/enm/nanoparticle-NWKI-c2075a8a-c7f2-31df-9d04-1cb096cdfece.json
deleted file mode 100644
index f1835f3..0000000
--- a/test/data/enm/nanoparticle-NWKI-c2075a8a-c7f2-31df-9d04-1cb096cdfece.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-c2ab6def-8305-3b78-958a-4657b3363e11.json b/test/data/enm/nanoparticle-NWKI-c2ab6def-8305-3b78-958a-4657b3363e11.json
deleted file mode 100644
index 5e9f080..0000000
--- a/test/data/enm/nanoparticle-NWKI-c2ab6def-8305-3b78-958a-4657b3363e11.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
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deleted file mode 100644
index 07ad643..0000000
--- a/test/data/enm/nanoparticle-NWKI-c35f0f16-4616-3ec6-a142-4d274add68a2.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-c3d91296-7c2d-3971-b932-e671f2f83aa8.json b/test/data/enm/nanoparticle-NWKI-c3d91296-7c2d-3971-b932-e671f2f83aa8.json
deleted file mode 100644
index 14f7c62..0000000
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+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-c3ff049e-e72a-35fe-9bbf-77f018259d63.json b/test/data/enm/nanoparticle-NWKI-c3ff049e-e72a-35fe-9bbf-77f018259d63.json
deleted file mode 100644
index 82b39db..0000000
--- a/test/data/enm/nanoparticle-NWKI-c3ff049e-e72a-35fe-9bbf-77f018259d63.json
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-c4c91023-5b41-3d6d-bb4f-ee1152926be0.json b/test/data/enm/nanoparticle-NWKI-c4c91023-5b41-3d6d-bb4f-ee1152926be0.json
deleted file mode 100644
index e609365..0000000
--- a/test/data/enm/nanoparticle-NWKI-c4c91023-5b41-3d6d-bb4f-ee1152926be0.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-c5b69d5d-7850-3ccb-9632-981dd8fb10e5.json b/test/data/enm/nanoparticle-NWKI-c5b69d5d-7850-3ccb-9632-981dd8fb10e5.json
deleted file mode 100644
index 66b80fc..0000000
--- a/test/data/enm/nanoparticle-NWKI-c5b69d5d-7850-3ccb-9632-981dd8fb10e5.json
+++ /dev/null
@@ -1,26 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-c5e226b0-d405-32d5-a652-7f7f1f0eb55d.json b/test/data/enm/nanoparticle-NWKI-c5e226b0-d405-32d5-a652-7f7f1f0eb55d.json
deleted file mode 100644
index 916d432..0000000
--- a/test/data/enm/nanoparticle-NWKI-c5e226b0-d405-32d5-a652-7f7f1f0eb55d.json
+++ /dev/null
@@ -1,88 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-c6c08b6e-cb44-3e91-9669-0979667f12b3.json b/test/data/enm/nanoparticle-NWKI-c6c08b6e-cb44-3e91-9669-0979667f12b3.json
deleted file mode 100644
index 068a9f5..0000000
--- a/test/data/enm/nanoparticle-NWKI-c6c08b6e-cb44-3e91-9669-0979667f12b3.json
+++ /dev/null
@@ -1,83 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-c7bee4e3-8884-3e29-ad8b-38decf6146fd.json b/test/data/enm/nanoparticle-NWKI-c7bee4e3-8884-3e29-ad8b-38decf6146fd.json
deleted file mode 100644
index b50f653..0000000
--- a/test/data/enm/nanoparticle-NWKI-c7bee4e3-8884-3e29-ad8b-38decf6146fd.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-c8d9772c-e50e-3c71-986c-e45692150d71.json b/test/data/enm/nanoparticle-NWKI-c8d9772c-e50e-3c71-986c-e45692150d71.json
deleted file mode 100644
index 2fcd7d8..0000000
--- a/test/data/enm/nanoparticle-NWKI-c8d9772c-e50e-3c71-986c-e45692150d71.json
+++ /dev/null
@@ -1,206 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-c93a144a-cd6d-3fe0-ab86-13adb168ccb1.json b/test/data/enm/nanoparticle-NWKI-c93a144a-cd6d-3fe0-ab86-13adb168ccb1.json
deleted file mode 100644
index 41f8a70..0000000
--- a/test/data/enm/nanoparticle-NWKI-c93a144a-cd6d-3fe0-ab86-13adb168ccb1.json
+++ /dev/null
@@ -1,87 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-c9abfc3e-dc22-3b02-89dd-c46bb64b998f.json b/test/data/enm/nanoparticle-NWKI-c9abfc3e-dc22-3b02-89dd-c46bb64b998f.json
deleted file mode 100644
index 7121b71..0000000
--- a/test/data/enm/nanoparticle-NWKI-c9abfc3e-dc22-3b02-89dd-c46bb64b998f.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-ca37d03d-af78-3982-8ca0-76025e71fcf1.json b/test/data/enm/nanoparticle-NWKI-ca37d03d-af78-3982-8ca0-76025e71fcf1.json
deleted file mode 100644
index 29fc78f..0000000
--- a/test/data/enm/nanoparticle-NWKI-ca37d03d-af78-3982-8ca0-76025e71fcf1.json
+++ /dev/null
@@ -1,94 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-cad5bf58-cc90-33e5-88bb-bad4c9f9fe9e.json b/test/data/enm/nanoparticle-NWKI-cad5bf58-cc90-33e5-88bb-bad4c9f9fe9e.json
deleted file mode 100644
index ae0bb67..0000000
--- a/test/data/enm/nanoparticle-NWKI-cad5bf58-cc90-33e5-88bb-bad4c9f9fe9e.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-cb42fef6-1b74-3a92-9b29-3ea2418f38c2.json b/test/data/enm/nanoparticle-NWKI-cb42fef6-1b74-3a92-9b29-3ea2418f38c2.json
deleted file mode 100644
index 556998c..0000000
--- a/test/data/enm/nanoparticle-NWKI-cb42fef6-1b74-3a92-9b29-3ea2418f38c2.json
+++ /dev/null
@@ -1,78 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-cc55dabc-3794-3853-9cf1-1e0bcf31fb69.json b/test/data/enm/nanoparticle-NWKI-cc55dabc-3794-3853-9cf1-1e0bcf31fb69.json
deleted file mode 100644
index 89fa1d4..0000000
--- a/test/data/enm/nanoparticle-NWKI-cc55dabc-3794-3853-9cf1-1e0bcf31fb69.json
+++ /dev/null
@@ -1,148 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-ccc62e19-8dfd-32a6-84fe-08e6ce7d12cc.json b/test/data/enm/nanoparticle-NWKI-ccc62e19-8dfd-32a6-84fe-08e6ce7d12cc.json
deleted file mode 100644
index 486d00e..0000000
--- a/test/data/enm/nanoparticle-NWKI-ccc62e19-8dfd-32a6-84fe-08e6ce7d12cc.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
- "compound": {
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- "structype": "NA",
- "metric": null,
- "name": "",
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- "values": {
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- "https://data.enanomapper.net/identifier/tradename": "Zhou2008 M44",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-ccc62e19-8dfd-32a6-84fe-08e6ce7d12cc",
- "https://data.enanomapper.net/owner/name": "NanoWiki"
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- "composition": [
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diff --git a/test/data/enm/nanoparticle-NWKI-cd7cf8fc-ebd1-3b60-827c-aa33e4d5d433.json b/test/data/enm/nanoparticle-NWKI-cd7cf8fc-ebd1-3b60-827c-aa33e4d5d433.json
deleted file mode 100644
index 0d30fa6..0000000
--- a/test/data/enm/nanoparticle-NWKI-cd7cf8fc-ebd1-3b60-827c-aa33e4d5d433.json
+++ /dev/null
@@ -1,84 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-ce0dc642-4b41-36fa-80c0-db986a2d3b70.json b/test/data/enm/nanoparticle-NWKI-ce0dc642-4b41-36fa-80c0-db986a2d3b70.json
deleted file mode 100644
index 6c47ce5..0000000
--- a/test/data/enm/nanoparticle-NWKI-ce0dc642-4b41-36fa-80c0-db986a2d3b70.json
+++ /dev/null
@@ -1,26 +0,0 @@
-{
- "compound": {
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- "https://data.enanomapper.net/identifier/tradename": "JRCNM03300a",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-ce0dc642-4b41-36fa-80c0-db986a2d3b70",
- "https://data.enanomapper.net/owner/name": "NanoWiki"
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diff --git a/test/data/enm/nanoparticle-NWKI-ce7a2667-21e4-3bd2-b1b6-bd8c298e9df4.json b/test/data/enm/nanoparticle-NWKI-ce7a2667-21e4-3bd2-b1b6-bd8c298e9df4.json
deleted file mode 100644
index 6f06818..0000000
--- a/test/data/enm/nanoparticle-NWKI-ce7a2667-21e4-3bd2-b1b6-bd8c298e9df4.json
+++ /dev/null
@@ -1,83 +0,0 @@
-{
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- "https://data.enanomapper.net/identifier/tradename": "Zhang2013 M12",
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- "https://data.enanomapper.net/owner/name": "NanoWiki",
- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/PARTICLE+SIZE/1BA3811ABDEA06BCCDBE29D2BBF8289121658065/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23ChemicalNameDefault": "La2O3",
- "https://data.enanomapper.net/feature/http%3A%2F%2Fwww.opentox.org%2Fapi%2F1.1%23CASRNDefault": "1312-81-8"
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- "compositionUUID": "NWKI-ce7a2667-21e4-3bd2-b1b6-bd8c298e9df4",
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diff --git a/test/data/enm/nanoparticle-NWKI-cfea3b7c-ee39-34ef-8349-16b1e7825861.json b/test/data/enm/nanoparticle-NWKI-cfea3b7c-ee39-34ef-8349-16b1e7825861.json
deleted file mode 100644
index f024a64..0000000
--- a/test/data/enm/nanoparticle-NWKI-cfea3b7c-ee39-34ef-8349-16b1e7825861.json
+++ /dev/null
@@ -1,257 +0,0 @@
-{
- "compound": {
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- "structype": "NA",
- "metric": null,
- "name": "",
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- "values": {
- "https://data.enanomapper.net/identifier/name": "PNP10",
- "https://data.enanomapper.net/identifier/tradename": "Shaw51 29",
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diff --git a/test/data/enm/nanoparticle-NWKI-d0227b15-023a-3fd1-b47d-0d805a24fc95.json b/test/data/enm/nanoparticle-NWKI-d0227b15-023a-3fd1-b47d-0d805a24fc95.json
deleted file mode 100644
index 430e81a..0000000
--- a/test/data/enm/nanoparticle-NWKI-d0227b15-023a-3fd1-b47d-0d805a24fc95.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-d0a80e1b-1b7f-35c7-9185-244ccc2c04c2.json b/test/data/enm/nanoparticle-NWKI-d0a80e1b-1b7f-35c7-9185-244ccc2c04c2.json
deleted file mode 100644
index 668b320..0000000
--- a/test/data/enm/nanoparticle-NWKI-d0a80e1b-1b7f-35c7-9185-244ccc2c04c2.json
+++ /dev/null
@@ -1,88 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-d0b876e3-0f35-3da8-ae72-3456689514e4.json b/test/data/enm/nanoparticle-NWKI-d0b876e3-0f35-3da8-ae72-3456689514e4.json
deleted file mode 100644
index c5b8444..0000000
--- a/test/data/enm/nanoparticle-NWKI-d0b876e3-0f35-3da8-ae72-3456689514e4.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-d1c31022-c044-30fa-931e-07d96b6f04b5.json b/test/data/enm/nanoparticle-NWKI-d1c31022-c044-30fa-931e-07d96b6f04b5.json
deleted file mode 100644
index 779009e..0000000
--- a/test/data/enm/nanoparticle-NWKI-d1c31022-c044-30fa-931e-07d96b6f04b5.json
+++ /dev/null
@@ -1,93 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-d2c2352c-f718-3054-a3bf-f850fb417cf7.json b/test/data/enm/nanoparticle-NWKI-d2c2352c-f718-3054-a3bf-f850fb417cf7.json
deleted file mode 100644
index a742bd3..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-d39efcf3-d871-34c2-ac1c-b48f35bde877.json b/test/data/enm/nanoparticle-NWKI-d39efcf3-d871-34c2-ac1c-b48f35bde877.json
deleted file mode 100644
index 3581f74..0000000
--- a/test/data/enm/nanoparticle-NWKI-d39efcf3-d871-34c2-ac1c-b48f35bde877.json
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-d3c8fab1-762e-32b8-a46e-cf4158f8ec49.json b/test/data/enm/nanoparticle-NWKI-d3c8fab1-762e-32b8-a46e-cf4158f8ec49.json
deleted file mode 100644
index a159b62..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-d40f9aa2-da27-3110-a76d-3e456d5d16c8.json b/test/data/enm/nanoparticle-NWKI-d40f9aa2-da27-3110-a76d-3e456d5d16c8.json
deleted file mode 100644
index f6b4067..0000000
--- a/test/data/enm/nanoparticle-NWKI-d40f9aa2-da27-3110-a76d-3e456d5d16c8.json
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diff --git a/test/data/enm/nanoparticle-NWKI-d42892b8-9b57-30a2-aa89-af61880c337a.json b/test/data/enm/nanoparticle-NWKI-d42892b8-9b57-30a2-aa89-af61880c337a.json
deleted file mode 100644
index 8516d77..0000000
--- a/test/data/enm/nanoparticle-NWKI-d42892b8-9b57-30a2-aa89-af61880c337a.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-d47026e9-f0f9-3080-8eca-d2b7fd66d261.json b/test/data/enm/nanoparticle-NWKI-d47026e9-f0f9-3080-8eca-d2b7fd66d261.json
deleted file mode 100644
index b64e8e9..0000000
--- a/test/data/enm/nanoparticle-NWKI-d47026e9-f0f9-3080-8eca-d2b7fd66d261.json
+++ /dev/null
@@ -1,84 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-d52e3489-851d-3eeb-b887-9a595cc9adfe.json b/test/data/enm/nanoparticle-NWKI-d52e3489-851d-3eeb-b887-9a595cc9adfe.json
deleted file mode 100644
index c3f815b..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-d5e6bacd-f551-3224-a7a3-1a612cdd1b20.json b/test/data/enm/nanoparticle-NWKI-d5e6bacd-f551-3224-a7a3-1a612cdd1b20.json
deleted file mode 100644
index 4a5f5cf..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-d63286d0-3205-3216-92ce-e9e2632aca9e.json b/test/data/enm/nanoparticle-NWKI-d63286d0-3205-3216-92ce-e9e2632aca9e.json
deleted file mode 100644
index b5952f6..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-d7e38d71-0fcb-3a23-8cbe-aae4ce82b33a.json b/test/data/enm/nanoparticle-NWKI-d7e38d71-0fcb-3a23-8cbe-aae4ce82b33a.json
deleted file mode 100644
index 1c62f65..0000000
--- a/test/data/enm/nanoparticle-NWKI-d7e38d71-0fcb-3a23-8cbe-aae4ce82b33a.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-d8f70c6c-3496-3ad3-8ab3-e4f08a178d30.json b/test/data/enm/nanoparticle-NWKI-d8f70c6c-3496-3ad3-8ab3-e4f08a178d30.json
deleted file mode 100644
index db37cab..0000000
--- a/test/data/enm/nanoparticle-NWKI-d8f70c6c-3496-3ad3-8ab3-e4f08a178d30.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-d9ca1fbc-29d5-31bf-9e86-0fefe94e53fe.json b/test/data/enm/nanoparticle-NWKI-d9ca1fbc-29d5-31bf-9e86-0fefe94e53fe.json
deleted file mode 100644
index 1de4d25..0000000
--- a/test/data/enm/nanoparticle-NWKI-d9ca1fbc-29d5-31bf-9e86-0fefe94e53fe.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-db562080-5286-327a-b813-6775c437385e.json b/test/data/enm/nanoparticle-NWKI-db562080-5286-327a-b813-6775c437385e.json
deleted file mode 100644
index ade9053..0000000
--- a/test/data/enm/nanoparticle-NWKI-db562080-5286-327a-b813-6775c437385e.json
+++ /dev/null
@@ -1,256 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-db9e79b1-e579-3732-9c27-51642b05f1ce.json b/test/data/enm/nanoparticle-NWKI-db9e79b1-e579-3732-9c27-51642b05f1ce.json
deleted file mode 100644
index d4de180..0000000
--- a/test/data/enm/nanoparticle-NWKI-db9e79b1-e579-3732-9c27-51642b05f1ce.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-dce4f64f-efad-316b-931a-0b16b2e63941.json b/test/data/enm/nanoparticle-NWKI-dce4f64f-efad-316b-931a-0b16b2e63941.json
deleted file mode 100644
index 169bd3a..0000000
--- a/test/data/enm/nanoparticle-NWKI-dce4f64f-efad-316b-931a-0b16b2e63941.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-dd085452-8fd2-3025-a64f-2784fdf17879.json b/test/data/enm/nanoparticle-NWKI-dd085452-8fd2-3025-a64f-2784fdf17879.json
deleted file mode 100644
index 64a035f..0000000
--- a/test/data/enm/nanoparticle-NWKI-dd085452-8fd2-3025-a64f-2784fdf17879.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-dd6b8324-524e-3281-8bf4-09044fbf01ab.json b/test/data/enm/nanoparticle-NWKI-dd6b8324-524e-3281-8bf4-09044fbf01ab.json
deleted file mode 100644
index c92f857..0000000
--- a/test/data/enm/nanoparticle-NWKI-dd6b8324-524e-3281-8bf4-09044fbf01ab.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-de03994b-9d74-3e39-aa41-e7df34384442.json b/test/data/enm/nanoparticle-NWKI-de03994b-9d74-3e39-aa41-e7df34384442.json
deleted file mode 100644
index 128437c..0000000
--- a/test/data/enm/nanoparticle-NWKI-de03994b-9d74-3e39-aa41-e7df34384442.json
+++ /dev/null
@@ -1,128 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-de41f2a0-0251-3e59-901b-1157d810c835.json b/test/data/enm/nanoparticle-NWKI-de41f2a0-0251-3e59-901b-1157d810c835.json
deleted file mode 100644
index 43fbfb4..0000000
--- a/test/data/enm/nanoparticle-NWKI-de41f2a0-0251-3e59-901b-1157d810c835.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-df2f5618-fab4-3f50-a191-1eabaa999ff9.json b/test/data/enm/nanoparticle-NWKI-df2f5618-fab4-3f50-a191-1eabaa999ff9.json
deleted file mode 100644
index 4f34129..0000000
--- a/test/data/enm/nanoparticle-NWKI-df2f5618-fab4-3f50-a191-1eabaa999ff9.json
+++ /dev/null
@@ -1,84 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-dfbd99e5-c150-3a5e-9147-59255d42bebb.json b/test/data/enm/nanoparticle-NWKI-dfbd99e5-c150-3a5e-9147-59255d42bebb.json
deleted file mode 100644
index ecff4d4..0000000
--- a/test/data/enm/nanoparticle-NWKI-dfbd99e5-c150-3a5e-9147-59255d42bebb.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-e0386856-5e55-330a-9b5e-364c00de2f2b.json b/test/data/enm/nanoparticle-NWKI-e0386856-5e55-330a-9b5e-364c00de2f2b.json
deleted file mode 100644
index 42cdff8..0000000
--- a/test/data/enm/nanoparticle-NWKI-e0386856-5e55-330a-9b5e-364c00de2f2b.json
+++ /dev/null
@@ -1,83 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-e053e604-6adb-3b7b-86e8-4f7ee2fb1898.json b/test/data/enm/nanoparticle-NWKI-e053e604-6adb-3b7b-86e8-4f7ee2fb1898.json
deleted file mode 100644
index 66e8378..0000000
--- a/test/data/enm/nanoparticle-NWKI-e053e604-6adb-3b7b-86e8-4f7ee2fb1898.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-e078849d-6137-33fc-b103-d458cb77184a.json b/test/data/enm/nanoparticle-NWKI-e078849d-6137-33fc-b103-d458cb77184a.json
deleted file mode 100644
index 0cf7a45..0000000
--- a/test/data/enm/nanoparticle-NWKI-e078849d-6137-33fc-b103-d458cb77184a.json
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diff --git a/test/data/enm/nanoparticle-NWKI-e0ffe4e6-978c-367d-a011-bd700587c9fe.json b/test/data/enm/nanoparticle-NWKI-e0ffe4e6-978c-367d-a011-bd700587c9fe.json
deleted file mode 100644
index 7344f82..0000000
--- a/test/data/enm/nanoparticle-NWKI-e0ffe4e6-978c-367d-a011-bd700587c9fe.json
+++ /dev/null
@@ -1,86 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-e14c3de8-6c96-3f77-a5b3-2e93cb4d09af.json b/test/data/enm/nanoparticle-NWKI-e14c3de8-6c96-3f77-a5b3-2e93cb4d09af.json
deleted file mode 100644
index 856b71d..0000000
--- a/test/data/enm/nanoparticle-NWKI-e14c3de8-6c96-3f77-a5b3-2e93cb4d09af.json
+++ /dev/null
@@ -1,79 +0,0 @@
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deleted file mode 100644
index 108193c..0000000
--- a/test/data/enm/nanoparticle-NWKI-e24378b0-c0bb-365a-b533-e8f303681c2e.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-e373781b-461e-35dd-ae27-4169b7d743af.json b/test/data/enm/nanoparticle-NWKI-e373781b-461e-35dd-ae27-4169b7d743af.json
deleted file mode 100644
index 5ca2b4f..0000000
--- a/test/data/enm/nanoparticle-NWKI-e373781b-461e-35dd-ae27-4169b7d743af.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-e476955f-97bd-3e4c-8bef-03f56fe1b15b.json b/test/data/enm/nanoparticle-NWKI-e476955f-97bd-3e4c-8bef-03f56fe1b15b.json
deleted file mode 100644
index a95731b..0000000
--- a/test/data/enm/nanoparticle-NWKI-e476955f-97bd-3e4c-8bef-03f56fe1b15b.json
+++ /dev/null
@@ -1,83 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-e4dab3d9-2699-3a0b-9e9c-f257088142cc.json b/test/data/enm/nanoparticle-NWKI-e4dab3d9-2699-3a0b-9e9c-f257088142cc.json
deleted file mode 100644
index 71bb353..0000000
--- a/test/data/enm/nanoparticle-NWKI-e4dab3d9-2699-3a0b-9e9c-f257088142cc.json
+++ /dev/null
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- "https://data.enanomapper.net/property/TOX/BAO_0003009_SECTION/Toxicity+Classifier/4A5B4D87918E77DA05FEF615D077AC5AC2D55497/NOTSPECIFIED/f8daa1d4-6a0f-323a-94a8-67272f2a67d1": [
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diff --git a/test/data/enm/nanoparticle-NWKI-e518c122-5f4f-3611-8b30-56b671883e5c.json b/test/data/enm/nanoparticle-NWKI-e518c122-5f4f-3611-8b30-56b671883e5c.json
deleted file mode 100644
index ed02c63..0000000
--- a/test/data/enm/nanoparticle-NWKI-e518c122-5f4f-3611-8b30-56b671883e5c.json
+++ /dev/null
@@ -1,256 +0,0 @@
-{
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- "https://data.enanomapper.net/identifier/tradename": "Shaw51 43",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-e518c122-5f4f-3611-8b30-56b671883e5c",
- "https://data.enanomapper.net/owner/name": "NanoWiki",
- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/PARTICLE+SIZE/1BA3811ABDEA06BCCDBE29D2BBF8289121658065/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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diff --git a/test/data/enm/nanoparticle-NWKI-e5b618fd-dd48-3562-9a55-737ac7a68466.json b/test/data/enm/nanoparticle-NWKI-e5b618fd-dd48-3562-9a55-737ac7a68466.json
deleted file mode 100644
index 5a28493..0000000
--- a/test/data/enm/nanoparticle-NWKI-e5b618fd-dd48-3562-9a55-737ac7a68466.json
+++ /dev/null
@@ -1,309 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-e624f68e-2e00-30e4-b4bb-9e34383580cb.json b/test/data/enm/nanoparticle-NWKI-e624f68e-2e00-30e4-b4bb-9e34383580cb.json
deleted file mode 100644
index 5d74f95..0000000
--- a/test/data/enm/nanoparticle-NWKI-e624f68e-2e00-30e4-b4bb-9e34383580cb.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-e6dfb823-e9fe-3ae9-9384-ef86f6d8cd5e.json b/test/data/enm/nanoparticle-NWKI-e6dfb823-e9fe-3ae9-9384-ef86f6d8cd5e.json
deleted file mode 100644
index 72779bb..0000000
--- a/test/data/enm/nanoparticle-NWKI-e6dfb823-e9fe-3ae9-9384-ef86f6d8cd5e.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-e6ef5597-a3f9-3f21-afff-db5f654ef534.json b/test/data/enm/nanoparticle-NWKI-e6ef5597-a3f9-3f21-afff-db5f654ef534.json
deleted file mode 100644
index 681046c..0000000
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diff --git a/test/data/enm/nanoparticle-NWKI-e7bdb2a3-0b3f-3a38-8d6b-1babc6d92da1.json b/test/data/enm/nanoparticle-NWKI-e7bdb2a3-0b3f-3a38-8d6b-1babc6d92da1.json
deleted file mode 100644
index 780b0cb..0000000
--- a/test/data/enm/nanoparticle-NWKI-e7bdb2a3-0b3f-3a38-8d6b-1babc6d92da1.json
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diff --git a/test/data/enm/nanoparticle-NWKI-e834e3f1-8c0d-319e-9bac-21c613bdccd0.json b/test/data/enm/nanoparticle-NWKI-e834e3f1-8c0d-319e-9bac-21c613bdccd0.json
deleted file mode 100644
index 92af4c3..0000000
--- a/test/data/enm/nanoparticle-NWKI-e834e3f1-8c0d-319e-9bac-21c613bdccd0.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-e85f1dfb-0830-32a3-8394-c2cce810e3e2.json b/test/data/enm/nanoparticle-NWKI-e85f1dfb-0830-32a3-8394-c2cce810e3e2.json
deleted file mode 100644
index 728833c..0000000
--- a/test/data/enm/nanoparticle-NWKI-e85f1dfb-0830-32a3-8394-c2cce810e3e2.json
+++ /dev/null
@@ -1,84 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-e866549e-38cf-3b98-a0b1-a483e275d261.json b/test/data/enm/nanoparticle-NWKI-e866549e-38cf-3b98-a0b1-a483e275d261.json
deleted file mode 100644
index 495fa85..0000000
--- a/test/data/enm/nanoparticle-NWKI-e866549e-38cf-3b98-a0b1-a483e275d261.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-e93603a1-8e0d-372a-8acf-48533b86ecb5.json b/test/data/enm/nanoparticle-NWKI-e93603a1-8e0d-372a-8acf-48533b86ecb5.json
deleted file mode 100644
index a29aa27..0000000
--- a/test/data/enm/nanoparticle-NWKI-e93603a1-8e0d-372a-8acf-48533b86ecb5.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-e93a9eb3-83df-3522-b417-7b3a379054a6.json b/test/data/enm/nanoparticle-NWKI-e93a9eb3-83df-3522-b417-7b3a379054a6.json
deleted file mode 100644
index 21b4ef8..0000000
--- a/test/data/enm/nanoparticle-NWKI-e93a9eb3-83df-3522-b417-7b3a379054a6.json
+++ /dev/null
@@ -1,94 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-e9c5527c-1603-322f-9b91-7830420a24d4.json b/test/data/enm/nanoparticle-NWKI-e9c5527c-1603-322f-9b91-7830420a24d4.json
deleted file mode 100644
index b8b3911..0000000
--- a/test/data/enm/nanoparticle-NWKI-e9c5527c-1603-322f-9b91-7830420a24d4.json
+++ /dev/null
@@ -1,26 +0,0 @@
-{
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- "structype": "NA",
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- "https://data.enanomapper.net/identifier/tradename": "E-GEOD-63559-M3",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-e9c5527c-1603-322f-9b91-7830420a24d4",
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diff --git a/test/data/enm/nanoparticle-NWKI-ea2bb63b-fd2a-32c2-a41a-d0280abaf29f.json b/test/data/enm/nanoparticle-NWKI-ea2bb63b-fd2a-32c2-a41a-d0280abaf29f.json
deleted file mode 100644
index ff15566..0000000
--- a/test/data/enm/nanoparticle-NWKI-ea2bb63b-fd2a-32c2-a41a-d0280abaf29f.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-ea48c37d-840a-30d2-9740-1198a7e2c3b6.json b/test/data/enm/nanoparticle-NWKI-ea48c37d-840a-30d2-9740-1198a7e2c3b6.json
deleted file mode 100644
index 38d7b3b..0000000
--- a/test/data/enm/nanoparticle-NWKI-ea48c37d-840a-30d2-9740-1198a7e2c3b6.json
+++ /dev/null
@@ -1,97 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-eb1607f5-ab08-3d94-9038-bbb8400e5e06.json b/test/data/enm/nanoparticle-NWKI-eb1607f5-ab08-3d94-9038-bbb8400e5e06.json
deleted file mode 100644
index 548ca4c..0000000
--- a/test/data/enm/nanoparticle-NWKI-eb1607f5-ab08-3d94-9038-bbb8400e5e06.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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- "structype": "NA",
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diff --git a/test/data/enm/nanoparticle-NWKI-ec00c05f-0b35-3c5a-b16f-7a3560213764.json b/test/data/enm/nanoparticle-NWKI-ec00c05f-0b35-3c5a-b16f-7a3560213764.json
deleted file mode 100644
index 20a392e..0000000
--- a/test/data/enm/nanoparticle-NWKI-ec00c05f-0b35-3c5a-b16f-7a3560213764.json
+++ /dev/null
@@ -1,256 +0,0 @@
-{
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- "structype": "NA",
- "metric": null,
- "name": "",
- "cas": "",
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- "values": {
- "https://data.enanomapper.net/identifier/name": "CLIO-SIA-FITC",
- "https://data.enanomapper.net/identifier/tradename": "Shaw51 20",
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- "https://data.enanomapper.net/property/P-CHEM/PC_GRANULOMETRY_SECTION/PARTICLE+SIZE/1BA3811ABDEA06BCCDBE29D2BBF8289121658065/NOTSPECIFIED/d41d8cd9-8f00-3204-a980-0998ecf8427e": [
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diff --git a/test/data/enm/nanoparticle-NWKI-eccbd5c0-7cdb-3dc5-b9e3-8a7e17b3915a.json b/test/data/enm/nanoparticle-NWKI-eccbd5c0-7cdb-3dc5-b9e3-8a7e17b3915a.json
deleted file mode 100644
index 1317826..0000000
--- a/test/data/enm/nanoparticle-NWKI-eccbd5c0-7cdb-3dc5-b9e3-8a7e17b3915a.json
+++ /dev/null
@@ -1,84 +0,0 @@
-{
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- "values": {
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- "https://data.enanomapper.net/identifier/tradename": "Zhou2008 M74",
- "https://data.enanomapper.net/identifier/uuid": "NWKI-eccbd5c0-7cdb-3dc5-b9e3-8a7e17b3915a",
- "https://data.enanomapper.net/owner/name": "NanoWiki",
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diff --git a/test/data/enm/nanoparticle-NWKI-ed06c39e-c7f2-3173-bd74-35b8257544b5.json b/test/data/enm/nanoparticle-NWKI-ed06c39e-c7f2-3173-bd74-35b8257544b5.json
deleted file mode 100644
index 0f1eaea..0000000
--- a/test/data/enm/nanoparticle-NWKI-ed06c39e-c7f2-3173-bd74-35b8257544b5.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-ed924e24-42e3-32d4-96ef-a5c14364ce26.json b/test/data/enm/nanoparticle-NWKI-ed924e24-42e3-32d4-96ef-a5c14364ce26.json
deleted file mode 100644
index 7321b22..0000000
--- a/test/data/enm/nanoparticle-NWKI-ed924e24-42e3-32d4-96ef-a5c14364ce26.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-ede00e9f-201f-33c9-9191-8dbf67fcf1b1.json b/test/data/enm/nanoparticle-NWKI-ede00e9f-201f-33c9-9191-8dbf67fcf1b1.json
deleted file mode 100644
index d15509e..0000000
--- a/test/data/enm/nanoparticle-NWKI-ede00e9f-201f-33c9-9191-8dbf67fcf1b1.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-ede0d5b5-191a-3003-ac70-a97397ea7bb2.json b/test/data/enm/nanoparticle-NWKI-ede0d5b5-191a-3003-ac70-a97397ea7bb2.json
deleted file mode 100644
index 001b6a7..0000000
--- a/test/data/enm/nanoparticle-NWKI-ede0d5b5-191a-3003-ac70-a97397ea7bb2.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-ee237892-6184-3016-92af-b41dc14e9f9b.json b/test/data/enm/nanoparticle-NWKI-ee237892-6184-3016-92af-b41dc14e9f9b.json
deleted file mode 100644
index d7dc70c..0000000
--- a/test/data/enm/nanoparticle-NWKI-ee237892-6184-3016-92af-b41dc14e9f9b.json
+++ /dev/null
@@ -1,203 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-ef6b55e8-e60a-3fe8-b58e-5e37ee807dc3.json b/test/data/enm/nanoparticle-NWKI-ef6b55e8-e60a-3fe8-b58e-5e37ee807dc3.json
deleted file mode 100644
index 14d65aa..0000000
--- a/test/data/enm/nanoparticle-NWKI-ef6b55e8-e60a-3fe8-b58e-5e37ee807dc3.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-ef8660fd-e624-3a94-91bc-ad5a6e47bcf3.json b/test/data/enm/nanoparticle-NWKI-ef8660fd-e624-3a94-91bc-ad5a6e47bcf3.json
deleted file mode 100644
index c7e204d..0000000
--- a/test/data/enm/nanoparticle-NWKI-ef8660fd-e624-3a94-91bc-ad5a6e47bcf3.json
+++ /dev/null
@@ -1,148 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-f1cc0abb-2905-3699-be62-b238a21e6bad.json b/test/data/enm/nanoparticle-NWKI-f1cc0abb-2905-3699-be62-b238a21e6bad.json
deleted file mode 100644
index b869f66..0000000
--- a/test/data/enm/nanoparticle-NWKI-f1cc0abb-2905-3699-be62-b238a21e6bad.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-f3be029d-68f6-310a-87a4-ceffee1b4eda.json b/test/data/enm/nanoparticle-NWKI-f3be029d-68f6-310a-87a4-ceffee1b4eda.json
deleted file mode 100644
index 6b4f90a..0000000
--- a/test/data/enm/nanoparticle-NWKI-f3be029d-68f6-310a-87a4-ceffee1b4eda.json
+++ /dev/null
@@ -1,94 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-f40bfb8a-1280-35a2-866c-42b5a3ce13e7.json b/test/data/enm/nanoparticle-NWKI-f40bfb8a-1280-35a2-866c-42b5a3ce13e7.json
deleted file mode 100644
index 9e90ba5..0000000
--- a/test/data/enm/nanoparticle-NWKI-f40bfb8a-1280-35a2-866c-42b5a3ce13e7.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-f4579554-a7fc-3e3f-991a-3b016207fa06.json b/test/data/enm/nanoparticle-NWKI-f4579554-a7fc-3e3f-991a-3b016207fa06.json
deleted file mode 100644
index 989f68b..0000000
--- a/test/data/enm/nanoparticle-NWKI-f4579554-a7fc-3e3f-991a-3b016207fa06.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-f5c4a09b-ce0a-3ff4-8d51-e200080a1ef5.json b/test/data/enm/nanoparticle-NWKI-f5c4a09b-ce0a-3ff4-8d51-e200080a1ef5.json
deleted file mode 100644
index fe49d93..0000000
--- a/test/data/enm/nanoparticle-NWKI-f5c4a09b-ce0a-3ff4-8d51-e200080a1ef5.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-f5e6d597-5acc-36a2-b631-b258fdeed741.json b/test/data/enm/nanoparticle-NWKI-f5e6d597-5acc-36a2-b631-b258fdeed741.json
deleted file mode 100644
index 960b408..0000000
--- a/test/data/enm/nanoparticle-NWKI-f5e6d597-5acc-36a2-b631-b258fdeed741.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-f6f54a71-9459-397b-b0f7-b27538cff042.json b/test/data/enm/nanoparticle-NWKI-f6f54a71-9459-397b-b0f7-b27538cff042.json
deleted file mode 100644
index 4c94d8a..0000000
--- a/test/data/enm/nanoparticle-NWKI-f6f54a71-9459-397b-b0f7-b27538cff042.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-f805b6f2-65b6-3dc4-917e-22a06bceffdf.json b/test/data/enm/nanoparticle-NWKI-f805b6f2-65b6-3dc4-917e-22a06bceffdf.json
deleted file mode 100644
index 46b3c9d..0000000
--- a/test/data/enm/nanoparticle-NWKI-f805b6f2-65b6-3dc4-917e-22a06bceffdf.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-f861208b-7805-30e7-867d-e100659eef99.json b/test/data/enm/nanoparticle-NWKI-f861208b-7805-30e7-867d-e100659eef99.json
deleted file mode 100644
index 0a9a609..0000000
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+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-f90f7f33-091c-3d54-b313-213083c0e052.json b/test/data/enm/nanoparticle-NWKI-f90f7f33-091c-3d54-b313-213083c0e052.json
deleted file mode 100644
index aaf0b2e..0000000
--- a/test/data/enm/nanoparticle-NWKI-f90f7f33-091c-3d54-b313-213083c0e052.json
+++ /dev/null
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-{
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deleted file mode 100644
index 965e0ac..0000000
--- a/test/data/enm/nanoparticle-NWKI-f926951f-587c-3206-88c9-bd92614da153.json
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-{
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diff --git a/test/data/enm/nanoparticle-NWKI-f9f316e8-e8a9-37f9-877f-86519b3af20e.json b/test/data/enm/nanoparticle-NWKI-f9f316e8-e8a9-37f9-877f-86519b3af20e.json
deleted file mode 100644
index 7672de9..0000000
--- a/test/data/enm/nanoparticle-NWKI-f9f316e8-e8a9-37f9-877f-86519b3af20e.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-fc00f3ef-464d-32d3-9d12-7e78d25db6ce.json b/test/data/enm/nanoparticle-NWKI-fc00f3ef-464d-32d3-9d12-7e78d25db6ce.json
deleted file mode 100644
index 5e3b3ac..0000000
--- a/test/data/enm/nanoparticle-NWKI-fc00f3ef-464d-32d3-9d12-7e78d25db6ce.json
+++ /dev/null
@@ -1,36 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-fd13d773-6ecf-3c5f-a939-ad83e99b9c02.json b/test/data/enm/nanoparticle-NWKI-fd13d773-6ecf-3c5f-a939-ad83e99b9c02.json
deleted file mode 100644
index be75fc9..0000000
--- a/test/data/enm/nanoparticle-NWKI-fd13d773-6ecf-3c5f-a939-ad83e99b9c02.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-fd891814-04d2-30bc-a0b6-cc3149bf75ec.json b/test/data/enm/nanoparticle-NWKI-fd891814-04d2-30bc-a0b6-cc3149bf75ec.json
deleted file mode 100644
index 1baef24..0000000
--- a/test/data/enm/nanoparticle-NWKI-fd891814-04d2-30bc-a0b6-cc3149bf75ec.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44.json b/test/data/enm/nanoparticle-NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44.json
deleted file mode 100644
index a24871a..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-NWKI-fe2fdf36-ff42-347a-b2f9-fd7a3627fd41.json b/test/data/enm/nanoparticle-NWKI-fe2fdf36-ff42-347a-b2f9-fd7a3627fd41.json
deleted file mode 100644
index c689756..0000000
--- a/test/data/enm/nanoparticle-NWKI-fe2fdf36-ff42-347a-b2f9-fd7a3627fd41.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-fe8fe744-ea1f-3841-9a6d-f81be44651a8.json b/test/data/enm/nanoparticle-NWKI-fe8fe744-ea1f-3841-9a6d-f81be44651a8.json
deleted file mode 100644
index d51b16f..0000000
--- a/test/data/enm/nanoparticle-NWKI-fe8fe744-ea1f-3841-9a6d-f81be44651a8.json
+++ /dev/null
@@ -1,143 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-NWKI-ff480524-2eb0-39e2-a449-47c026f09eb9.json b/test/data/enm/nanoparticle-NWKI-ff480524-2eb0-39e2-a449-47c026f09eb9.json
deleted file mode 100644
index cdb64c0..0000000
--- a/test/data/enm/nanoparticle-NWKI-ff480524-2eb0-39e2-a449-47c026f09eb9.json
+++ /dev/null
@@ -1,88 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-NWKI-ff85c0ea-c908-35c8-9f1c-bfd037800a31.json b/test/data/enm/nanoparticle-NWKI-ff85c0ea-c908-35c8-9f1c-bfd037800a31.json
deleted file mode 100644
index b51ef90..0000000
--- a/test/data/enm/nanoparticle-NWKI-ff85c0ea-c908-35c8-9f1c-bfd037800a31.json
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diff --git a/test/data/enm/nanoparticle-NWKI-fff7eca3-dcbb-334d-b6f1-a1dad747e6d0.json b/test/data/enm/nanoparticle-NWKI-fff7eca3-dcbb-334d-b6f1-a1dad747e6d0.json
deleted file mode 100644
index b010f78..0000000
--- a/test/data/enm/nanoparticle-NWKI-fff7eca3-dcbb-334d-b6f1-a1dad747e6d0.json
+++ /dev/null
@@ -1,79 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-XLSX-00cd0ac9-9adc-38a5-9520-89ddd591f75f.json b/test/data/enm/nanoparticle-XLSX-00cd0ac9-9adc-38a5-9520-89ddd591f75f.json
deleted file mode 100644
index bd84ffa..0000000
--- a/test/data/enm/nanoparticle-XLSX-00cd0ac9-9adc-38a5-9520-89ddd591f75f.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/nanoparticle-XLSX-0bfa2e41-c6b6-3cbf-8a1e-73bf006768ab.json b/test/data/enm/nanoparticle-XLSX-0bfa2e41-c6b6-3cbf-8a1e-73bf006768ab.json
deleted file mode 100644
index 3c04f37..0000000
--- a/test/data/enm/nanoparticle-XLSX-0bfa2e41-c6b6-3cbf-8a1e-73bf006768ab.json
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deleted file mode 100644
index 2b675cf..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-12620892-23e5-37f4-9644-a82c4240d695.json b/test/data/enm/nanoparticle-XLSX-12620892-23e5-37f4-9644-a82c4240d695.json
deleted file mode 100644
index 0f687b7..0000000
--- a/test/data/enm/nanoparticle-XLSX-12620892-23e5-37f4-9644-a82c4240d695.json
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diff --git a/test/data/enm/nanoparticle-XLSX-190fb54d-9b65-3d58-b65e-b3aae9a1f182.json b/test/data/enm/nanoparticle-XLSX-190fb54d-9b65-3d58-b65e-b3aae9a1f182.json
deleted file mode 100644
index fda0973..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-2aef353b-440f-32a7-8447-1974997a69a8.json b/test/data/enm/nanoparticle-XLSX-2aef353b-440f-32a7-8447-1974997a69a8.json
deleted file mode 100644
index 2c0af57..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-3dac4f9c-8c47-3085-9781-e70583adb12f.json b/test/data/enm/nanoparticle-XLSX-3dac4f9c-8c47-3085-9781-e70583adb12f.json
deleted file mode 100644
index d1ef200..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-XLSX-3ff81e94-3d5d-3e58-a761-b0bd7c94de3b.json b/test/data/enm/nanoparticle-XLSX-3ff81e94-3d5d-3e58-a761-b0bd7c94de3b.json
deleted file mode 100644
index 79dea25..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-XLSX-498d791a-4c0f-3eab-bb2b-bd554637d9af.json b/test/data/enm/nanoparticle-XLSX-498d791a-4c0f-3eab-bb2b-bd554637d9af.json
deleted file mode 100644
index 12e49ad..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-XLSX-4ceef1bf-5f19-34e7-9d3d-51d65be297d7.json b/test/data/enm/nanoparticle-XLSX-4ceef1bf-5f19-34e7-9d3d-51d65be297d7.json
deleted file mode 100644
index 4d9c522..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-53ac37fa-9e10-3f71-9d74-bc47f28880ff.json b/test/data/enm/nanoparticle-XLSX-53ac37fa-9e10-3f71-9d74-bc47f28880ff.json
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index e65940c..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-56c58705-05c6-304f-bb42-a3a328e06319.json b/test/data/enm/nanoparticle-XLSX-56c58705-05c6-304f-bb42-a3a328e06319.json
deleted file mode 100644
index 269f203..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-58c9f610-0fef-3009-8112-6ea05d863644.json b/test/data/enm/nanoparticle-XLSX-58c9f610-0fef-3009-8112-6ea05d863644.json
deleted file mode 100644
index 4da4215..0000000
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index c3865ad..0000000
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index c260e7d..0000000
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index f511cc6..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-5d7807f7-a13b-392f-88af-fe7885a67502.json b/test/data/enm/nanoparticle-XLSX-5d7807f7-a13b-392f-88af-fe7885a67502.json
deleted file mode 100644
index 122d6a1..0000000
--- a/test/data/enm/nanoparticle-XLSX-5d7807f7-a13b-392f-88af-fe7885a67502.json
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index fae2a50..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-5efaa24e-6eb5-3f1f-a9f4-680bc92364d6.json b/test/data/enm/nanoparticle-XLSX-5efaa24e-6eb5-3f1f-a9f4-680bc92364d6.json
deleted file mode 100644
index acb684f..0000000
--- a/test/data/enm/nanoparticle-XLSX-5efaa24e-6eb5-3f1f-a9f4-680bc92364d6.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-XLSX-64e97bde-be4b-34fb-b216-85724e66b02a.json b/test/data/enm/nanoparticle-XLSX-64e97bde-be4b-34fb-b216-85724e66b02a.json
deleted file mode 100644
index 2c4cd74..0000000
--- a/test/data/enm/nanoparticle-XLSX-64e97bde-be4b-34fb-b216-85724e66b02a.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-XLSX-6fac9681-a5c7-337c-9e35-87c04579f0e6.json b/test/data/enm/nanoparticle-XLSX-6fac9681-a5c7-337c-9e35-87c04579f0e6.json
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index 2a13b3f..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-7011cea0-1011-3f8b-9e8a-b3289fed836a.json b/test/data/enm/nanoparticle-XLSX-7011cea0-1011-3f8b-9e8a-b3289fed836a.json
deleted file mode 100644
index 6e04fef..0000000
--- a/test/data/enm/nanoparticle-XLSX-7011cea0-1011-3f8b-9e8a-b3289fed836a.json
+++ /dev/null
@@ -1,477 +0,0 @@
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index 55c6a7b..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-75ca4d9f-546f-3d7d-a24e-d0d54809cbb3.json b/test/data/enm/nanoparticle-XLSX-75ca4d9f-546f-3d7d-a24e-d0d54809cbb3.json
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diff --git a/test/data/enm/nanoparticle-XLSX-7677801c-4895-3ffd-807a-832c589341df.json b/test/data/enm/nanoparticle-XLSX-7677801c-4895-3ffd-807a-832c589341df.json
deleted file mode 100644
index 267ceea..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-7d5a7a1b-5069-3256-b796-2361afcf3bfe.json b/test/data/enm/nanoparticle-XLSX-7d5a7a1b-5069-3256-b796-2361afcf3bfe.json
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index 925e79b..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-7e2b0550-595b-3427-b6f3-b84211a5c402.json b/test/data/enm/nanoparticle-XLSX-7e2b0550-595b-3427-b6f3-b84211a5c402.json
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diff --git a/test/data/enm/nanoparticle-XLSX-92788191-34d9-39b4-aa9c-503da51fc1a6.json b/test/data/enm/nanoparticle-XLSX-92788191-34d9-39b4-aa9c-503da51fc1a6.json
deleted file mode 100644
index 9f4e5e6..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-XLSX-93b2da85-fc0c-315f-8d3b-77f1a7776fb4.json b/test/data/enm/nanoparticle-XLSX-93b2da85-fc0c-315f-8d3b-77f1a7776fb4.json
deleted file mode 100644
index e6b426a..0000000
--- a/test/data/enm/nanoparticle-XLSX-93b2da85-fc0c-315f-8d3b-77f1a7776fb4.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-XLSX-95020ff3-17ee-3889-8a9f-f2555dc4a930.json b/test/data/enm/nanoparticle-XLSX-95020ff3-17ee-3889-8a9f-f2555dc4a930.json
deleted file mode 100644
index 62a4548..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-9eb0db98-07c0-37fb-9fc3-7126d72252c4.json b/test/data/enm/nanoparticle-XLSX-9eb0db98-07c0-37fb-9fc3-7126d72252c4.json
deleted file mode 100644
index 8901059..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-9f84408a-4414-33c9-a0f2-53bd19cf2d65.json b/test/data/enm/nanoparticle-XLSX-9f84408a-4414-33c9-a0f2-53bd19cf2d65.json
deleted file mode 100644
index 7eefe94..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-a0d9ab63-ee03-3224-984a-4bd276e3ea3a.json b/test/data/enm/nanoparticle-XLSX-a0d9ab63-ee03-3224-984a-4bd276e3ea3a.json
deleted file mode 100644
index 69ee4cc..0000000
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index 067423d..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-a44564c5-1458-3e3b-aca7-d63f5221d2a8.json b/test/data/enm/nanoparticle-XLSX-a44564c5-1458-3e3b-aca7-d63f5221d2a8.json
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index 0799f99..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-aa7e2fd6-c054-35ed-a9d9-1f40c1d179a3.json b/test/data/enm/nanoparticle-XLSX-aa7e2fd6-c054-35ed-a9d9-1f40c1d179a3.json
deleted file mode 100644
index 6399a6a..0000000
--- a/test/data/enm/nanoparticle-XLSX-aa7e2fd6-c054-35ed-a9d9-1f40c1d179a3.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-XLSX-aacdfad8-f3d3-39f2-b662-0d8084e283ef.json b/test/data/enm/nanoparticle-XLSX-aacdfad8-f3d3-39f2-b662-0d8084e283ef.json
deleted file mode 100644
index 0c26360..0000000
--- a/test/data/enm/nanoparticle-XLSX-aacdfad8-f3d3-39f2-b662-0d8084e283ef.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-XLSX-acb82e6d-63d6-3cf4-a796-a281b1ba835f.json b/test/data/enm/nanoparticle-XLSX-acb82e6d-63d6-3cf4-a796-a281b1ba835f.json
deleted file mode 100644
index 7a0007b..0000000
--- a/test/data/enm/nanoparticle-XLSX-acb82e6d-63d6-3cf4-a796-a281b1ba835f.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-XLSX-ad0a7571-a887-3611-a508-f32ad71f20be.json b/test/data/enm/nanoparticle-XLSX-ad0a7571-a887-3611-a508-f32ad71f20be.json
deleted file mode 100644
index 837dbd8..0000000
--- a/test/data/enm/nanoparticle-XLSX-ad0a7571-a887-3611-a508-f32ad71f20be.json
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diff --git a/test/data/enm/nanoparticle-XLSX-ade46bc8-d87f-3f9b-afd0-11ca32e5caeb.json b/test/data/enm/nanoparticle-XLSX-ade46bc8-d87f-3f9b-afd0-11ca32e5caeb.json
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index 8106400..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-adf890e9-3623-3a0e-b601-11f8e5e2f3cb.json b/test/data/enm/nanoparticle-XLSX-adf890e9-3623-3a0e-b601-11f8e5e2f3cb.json
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index df4ed11..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-b4e4a8e9-6d27-3218-a243-7aa30560adb1.json b/test/data/enm/nanoparticle-XLSX-b4e4a8e9-6d27-3218-a243-7aa30560adb1.json
deleted file mode 100644
index 9d9c65b..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-XLSX-c42f434e-6295-3715-8a23-ce26f87642a6.json b/test/data/enm/nanoparticle-XLSX-c42f434e-6295-3715-8a23-ce26f87642a6.json
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index b439a67..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-ce148a7f-3da2-3fb8-9245-161eb6747522.json b/test/data/enm/nanoparticle-XLSX-ce148a7f-3da2-3fb8-9245-161eb6747522.json
deleted file mode 100644
index 304e523..0000000
--- a/test/data/enm/nanoparticle-XLSX-ce148a7f-3da2-3fb8-9245-161eb6747522.json
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diff --git a/test/data/enm/nanoparticle-XLSX-d3a9ce39-6c15-3e4b-a5ce-5ea23e45ff16.json b/test/data/enm/nanoparticle-XLSX-d3a9ce39-6c15-3e4b-a5ce-5ea23e45ff16.json
deleted file mode 100644
index 83d1dbb..0000000
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+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-XLSX-d4f2714a-a7f6-305a-af41-18d8129fef13.json b/test/data/enm/nanoparticle-XLSX-d4f2714a-a7f6-305a-af41-18d8129fef13.json
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index b4ef910..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-d6285533-0204-3884-a3d8-1dffdcde6324.json b/test/data/enm/nanoparticle-XLSX-d6285533-0204-3884-a3d8-1dffdcde6324.json
deleted file mode 100644
index 337b613..0000000
--- a/test/data/enm/nanoparticle-XLSX-d6285533-0204-3884-a3d8-1dffdcde6324.json
+++ /dev/null
@@ -1,206 +0,0 @@
-{
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diff --git a/test/data/enm/nanoparticle-XLSX-d7934c3e-9eac-34bc-8c60-4cf0c46e92a3.json b/test/data/enm/nanoparticle-XLSX-d7934c3e-9eac-34bc-8c60-4cf0c46e92a3.json
deleted file mode 100644
index 5bc7512..0000000
--- a/test/data/enm/nanoparticle-XLSX-d7934c3e-9eac-34bc-8c60-4cf0c46e92a3.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f.json b/test/data/enm/nanoparticle-XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f.json
deleted file mode 100644
index 2fd261f..0000000
--- a/test/data/enm/nanoparticle-XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f.json
+++ /dev/null
@@ -1,196 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-XLSX-de76fc02-ef1f-310a-b61f-6aab5b586412.json b/test/data/enm/nanoparticle-XLSX-de76fc02-ef1f-310a-b61f-6aab5b586412.json
deleted file mode 100644
index 4186278..0000000
--- a/test/data/enm/nanoparticle-XLSX-de76fc02-ef1f-310a-b61f-6aab5b586412.json
+++ /dev/null
@@ -1,173 +0,0 @@
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diff --git a/test/data/enm/nanoparticle-XLSX-f1b0af03-df66-3849-93cc-4ca706c0f751.json b/test/data/enm/nanoparticle-XLSX-f1b0af03-df66-3849-93cc-4ca706c0f751.json
deleted file mode 100644
index 32e26e6..0000000
--- a/test/data/enm/nanoparticle-XLSX-f1b0af03-df66-3849-93cc-4ca706c0f751.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-XLSX-f94651ce-fd32-3306-8f89-32ffdf533be9.json b/test/data/enm/nanoparticle-XLSX-f94651ce-fd32-3306-8f89-32ffdf533be9.json
deleted file mode 100644
index 3c29ea6..0000000
--- a/test/data/enm/nanoparticle-XLSX-f94651ce-fd32-3306-8f89-32ffdf533be9.json
+++ /dev/null
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diff --git a/test/data/enm/nanoparticle-XLSX-fa48e134-54cf-3417-a63a-6f744191cec2.json b/test/data/enm/nanoparticle-XLSX-fa48e134-54cf-3417-a63a-6f744191cec2.json
deleted file mode 100644
index fe8981d..0000000
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diff --git a/test/data/enm/nanoparticle-XLSX-ffd24485-3b05-3afe-b6ff-547800723f71.json b/test/data/enm/nanoparticle-XLSX-ffd24485-3b05-3afe-b6ff-547800723f71.json
deleted file mode 100644
index 3527ef7..0000000
--- a/test/data/enm/nanoparticle-XLSX-ffd24485-3b05-3afe-b6ff-547800723f71.json
+++ /dev/null
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deleted file mode 100644
index 41a34eb..0000000
--- a/test/data/enm/study-FCSV-0000ec94-d7ad-301e-a7ee-e827a0297485.json
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-{
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diff --git a/test/data/enm/study-FCSV-00573bc3-40d3-30ab-b785-af6955d501f6.json b/test/data/enm/study-FCSV-00573bc3-40d3-30ab-b785-af6955d501f6.json
deleted file mode 100644
index 7e6d85f..0000000
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-{
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deleted file mode 100644
index 2f098ad..0000000
--- a/test/data/enm/study-FCSV-00a42c73-cd70-3425-bc04-ba0f3acd891a.json
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-{
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diff --git a/test/data/enm/study-FCSV-00b32641-d599-317a-9727-4844af596b1f.json b/test/data/enm/study-FCSV-00b32641-d599-317a-9727-4844af596b1f.json
deleted file mode 100644
index 7c76556..0000000
--- a/test/data/enm/study-FCSV-00b32641-d599-317a-9727-4844af596b1f.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/study-FCSV-00b548c5-6341-3b3e-b190-bdd1adfaa74f.json b/test/data/enm/study-FCSV-00b548c5-6341-3b3e-b190-bdd1adfaa74f.json
deleted file mode 100644
index 4a9cd46..0000000
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-{
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deleted file mode 100644
index d52d255..0000000
--- a/test/data/enm/study-FCSV-00b9b03e-4111-321f-9d81-b9125909ae66.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-00b9b03e-4111-321f-9d81-b9125909ae66",
- "owner": {
- "substance": {
- "uuid": "FCSV-ff7d2c8c-3d2f-316a-b890-6f9e7d88df4c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 225.663,
- "errQualifier": "sd",
- "errorValue": 17.037
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.032
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-01abb810-9868-3db0-8288-79e3c99be0b3.json b/test/data/enm/study-FCSV-01abb810-9868-3db0-8288-79e3c99be0b3.json
deleted file mode 100644
index 2ea622f..0000000
--- a/test/data/enm/study-FCSV-01abb810-9868-3db0-8288-79e3c99be0b3.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-01abb810-9868-3db0-8288-79e3c99be0b3",
- "owner": {
- "substance": {
- "uuid": "FCSV-770a2d39-1509-3c93-b28f-1d3e345de450"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-01eb473c-fdb5-350f-b583-e197bf336fd4.json b/test/data/enm/study-FCSV-01eb473c-fdb5-350f-b583-e197bf336fd4.json
deleted file mode 100644
index 0318ffb..0000000
--- a/test/data/enm/study-FCSV-01eb473c-fdb5-350f-b583-e197bf336fd4.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-01eb473c-fdb5-350f-b583-e197bf336fd4",
- "owner": {
- "substance": {
- "uuid": "FCSV-064f1803-3b9e-3f44-a5f6-60b1f573830c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.002,
- "errQualifier": "sd",
- "errorValue": 0.003
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -9.251,
- "errQualifier": "std",
- "errorValue": 2.422
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-02153b0c-9d4d-3bbc-9c85-e9186005d2e7.json b/test/data/enm/study-FCSV-02153b0c-9d4d-3bbc-9c85-e9186005d2e7.json
deleted file mode 100644
index 5b484e3..0000000
--- a/test/data/enm/study-FCSV-02153b0c-9d4d-3bbc-9c85-e9186005d2e7.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-02153b0c-9d4d-3bbc-9c85-e9186005d2e7",
- "owner": {
- "substance": {
- "uuid": "FCSV-d6c56b3e-71a2-330b-92b6-9c90e6046eaa"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 2.723,
- "errQualifier": "sd",
- "errorValue": 0.08
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0228f0ad-b54f-35be-8d4b-ea8f97db9d39.json b/test/data/enm/study-FCSV-0228f0ad-b54f-35be-8d4b-ea8f97db9d39.json
deleted file mode 100644
index b4b3985..0000000
--- a/test/data/enm/study-FCSV-0228f0ad-b54f-35be-8d4b-ea8f97db9d39.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-0228f0ad-b54f-35be-8d4b-ea8f97db9d39",
- "owner": {
- "substance": {
- "uuid": "FCSV-2a853f39-424f-3a63-91f3-1300f85ebe73"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.267,
- "errQualifier": "sd",
- "errorValue": 0.004
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.317,
- "errQualifier": "sd",
- "errorValue": 0.014
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 520.23,
- "errQualifier": "sd",
- "errorValue": 0.29
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0235de81-0a29-31f4-a3e6-b45485c88a21.json b/test/data/enm/study-FCSV-0235de81-0a29-31f4-a3e6-b45485c88a21.json
deleted file mode 100644
index a55a662..0000000
--- a/test/data/enm/study-FCSV-0235de81-0a29-31f4-a3e6-b45485c88a21.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-0235de81-0a29-31f4-a3e6-b45485c88a21",
- "owner": {
- "substance": {
- "uuid": "FCSV-6ed95128-c2b8-3cfe-a0b4-29d2b06c6bc6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.013,
- "errQualifier": "sd",
- "errorValue": 0.016
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -6.239,
- "errQualifier": "std",
- "errorValue": 1.703
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-02719665-14fc-3005-8d86-43499af783ec.json b/test/data/enm/study-FCSV-02719665-14fc-3005-8d86-43499af783ec.json
deleted file mode 100644
index 533d703..0000000
--- a/test/data/enm/study-FCSV-02719665-14fc-3005-8d86-43499af783ec.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-02719665-14fc-3005-8d86-43499af783ec",
- "owner": {
- "substance": {
- "uuid": "FCSV-ff7d2c8c-3d2f-316a-b890-6f9e7d88df4c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-02805afa-31cd-3de4-be08-b908a63575c6.json b/test/data/enm/study-FCSV-02805afa-31cd-3de4-be08-b908a63575c6.json
deleted file mode 100644
index 2f427e9..0000000
--- a/test/data/enm/study-FCSV-02805afa-31cd-3de4-be08-b908a63575c6.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-02805afa-31cd-3de4-be08-b908a63575c6",
- "owner": {
- "substance": {
- "uuid": "FCSV-ed95bb69-9fa7-3a4a-b4a4-32dd947d4d1a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-02d6ae10-9b28-3d39-afc5-70cc57e11381.json b/test/data/enm/study-FCSV-02d6ae10-9b28-3d39-afc5-70cc57e11381.json
deleted file mode 100644
index 532280d..0000000
--- a/test/data/enm/study-FCSV-02d6ae10-9b28-3d39-afc5-70cc57e11381.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-02d6ae10-9b28-3d39-afc5-70cc57e11381",
- "owner": {
- "substance": {
- "uuid": "FCSV-99734121-3347-3d4e-9bc6-67956450b140"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 467.795,
- "errQualifier": "sd",
- "errorValue": 17.443
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.043
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-031c747a-a865-3db8-8fbc-af72c00c6778.json b/test/data/enm/study-FCSV-031c747a-a865-3db8-8fbc-af72c00c6778.json
deleted file mode 100644
index 51fea0d..0000000
--- a/test/data/enm/study-FCSV-031c747a-a865-3db8-8fbc-af72c00c6778.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-031c747a-a865-3db8-8fbc-af72c00c6778",
- "owner": {
- "substance": {
- "uuid": "FCSV-6b15ab65-c2d3-3e58-ac04-18d8e1d45a7a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 3.282,
- "errQualifier": "sd",
- "errorValue": 1.024
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0337b2d8-337c-3868-92e6-e1c3b2cd413b.json b/test/data/enm/study-FCSV-0337b2d8-337c-3868-92e6-e1c3b2cd413b.json
deleted file mode 100644
index fd61f48..0000000
--- a/test/data/enm/study-FCSV-0337b2d8-337c-3868-92e6-e1c3b2cd413b.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-0337b2d8-337c-3868-92e6-e1c3b2cd413b",
- "owner": {
- "substance": {
- "uuid": "FCSV-8b5b62c3-7fd2-3bba-b293-b7537e4971b1"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-03c1072d-7a21-3917-8c97-56beba0ec360.json b/test/data/enm/study-FCSV-03c1072d-7a21-3917-8c97-56beba0ec360.json
deleted file mode 100644
index 32422db..0000000
--- a/test/data/enm/study-FCSV-03c1072d-7a21-3917-8c97-56beba0ec360.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-03c1072d-7a21-3917-8c97-56beba0ec360",
- "owner": {
- "substance": {
- "uuid": "FCSV-7ad8c003-d0ee-3ea6-9374-b6e4d2f33401"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-04172a41-9fea-36d9-8b5c-cf0bd3577d21.json b/test/data/enm/study-FCSV-04172a41-9fea-36d9-8b5c-cf0bd3577d21.json
deleted file mode 100644
index 82a12a0..0000000
--- a/test/data/enm/study-FCSV-04172a41-9fea-36d9-8b5c-cf0bd3577d21.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-04172a41-9fea-36d9-8b5c-cf0bd3577d21",
- "owner": {
- "substance": {
- "uuid": "FCSV-b228fc7b-c407-368a-bc1c-359c7375bb9b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-04386e9b-8b1f-3f64-9356-1947e3e22d87.json b/test/data/enm/study-FCSV-04386e9b-8b1f-3f64-9356-1947e3e22d87.json
deleted file mode 100644
index 45ce889..0000000
--- a/test/data/enm/study-FCSV-04386e9b-8b1f-3f64-9356-1947e3e22d87.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-04386e9b-8b1f-3f64-9356-1947e3e22d87",
- "owner": {
- "substance": {
- "uuid": "FCSV-924a51b9-97d3-31fb-b289-52688d9d0d3c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Thiolated L-methionine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0486a609-f271-3c87-9281-ad3650d3ee3f.json b/test/data/enm/study-FCSV-0486a609-f271-3c87-9281-ad3650d3ee3f.json
deleted file mode 100644
index ab917a6..0000000
--- a/test/data/enm/study-FCSV-0486a609-f271-3c87-9281-ad3650d3ee3f.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-0486a609-f271-3c87-9281-ad3650d3ee3f",
- "owner": {
- "substance": {
- "uuid": "FCSV-80a36fc5-9a73-358c-829b-2e69eea82125"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 129.48,
- "errQualifier": "sd",
- "errorValue": 2.17
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 127.22,
- "errQualifier": "sd",
- "errorValue": 3.09
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 131.38,
- "errQualifier": "sd",
- "errorValue": 2.76
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 128.76,
- "errQualifier": "sd",
- "errorValue": 4.49
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 130.3,
- "errQualifier": "sd",
- "errorValue": 1.88
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 125.33,
- "errQualifier": "sd",
- "errorValue": 3.96
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 130.3,
- "errQualifier": "sd",
- "errorValue": 2.34
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 127.87,
- "errQualifier": "sd",
- "errorValue": 3.96
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0491b83a-ce88-3d70-818a-4b38413e4bc9.json b/test/data/enm/study-FCSV-0491b83a-ce88-3d70-818a-4b38413e4bc9.json
deleted file mode 100644
index 0a059b6..0000000
--- a/test/data/enm/study-FCSV-0491b83a-ce88-3d70-818a-4b38413e4bc9.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-0491b83a-ce88-3d70-818a-4b38413e4bc9",
- "owner": {
- "substance": {
- "uuid": "FCSV-8619e6db-2c01-389e-b05b-e75273d18359"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.851,
- "errQualifier": "sd",
- "errorValue": 0.245
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-049496bb-a71e-3cfe-9348-cc2e3a5b0558.json b/test/data/enm/study-FCSV-049496bb-a71e-3cfe-9348-cc2e3a5b0558.json
deleted file mode 100644
index cb9a5c6..0000000
--- a/test/data/enm/study-FCSV-049496bb-a71e-3cfe-9348-cc2e3a5b0558.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-049496bb-a71e-3cfe-9348-cc2e3a5b0558",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc488cf3-986d-34cf-9ee7-12f98873dfe4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 442.584,
- "errQualifier": "sd",
- "errorValue": 2.509
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.036
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-04dfaaa3-2294-3e1b-9c2e-5518c2c1c33f.json b/test/data/enm/study-FCSV-04dfaaa3-2294-3e1b-9c2e-5518c2c1c33f.json
deleted file mode 100644
index d82d953..0000000
--- a/test/data/enm/study-FCSV-04dfaaa3-2294-3e1b-9c2e-5518c2c1c33f.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-04dfaaa3-2294-3e1b-9c2e-5518c2c1c33f",
- "owner": {
- "substance": {
- "uuid": "FCSV-aab0ef77-8a71-36d7-9185-d2f76b9e3567"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.207,
- "errQualifier": "sd",
- "errorValue": 0.06
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.265,
- "errQualifier": "sd",
- "errorValue": 0.011
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 521.07,
- "errQualifier": "sd",
- "errorValue": 0.31
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-04e4cda5-2b3a-3e2b-909e-abe55a5b9026.json b/test/data/enm/study-FCSV-04e4cda5-2b3a-3e2b-909e-abe55a5b9026.json
deleted file mode 100644
index bab5c88..0000000
--- a/test/data/enm/study-FCSV-04e4cda5-2b3a-3e2b-909e-abe55a5b9026.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-04e4cda5-2b3a-3e2b-909e-abe55a5b9026",
- "owner": {
- "substance": {
- "uuid": "FCSV-70406142-0fd6-30bd-873b-5cce39016ed5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 73.06,
- "errQualifier": "sd",
- "errorValue": 3.64
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 105.01,
- "errQualifier": "sd",
- "errorValue": 2.36
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 72.23,
- "errQualifier": "sd",
- "errorValue": 2.92
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 105.73,
- "errQualifier": "sd",
- "errorValue": 5.56
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 77.85,
- "errQualifier": "sd",
- "errorValue": 2.88
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 98.17,
- "errQualifier": "sd",
- "errorValue": 4.35
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 77.85,
- "errQualifier": "sd",
- "errorValue": 3.22
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 109.21,
- "errQualifier": "sd",
- "errorValue": 4.82
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-054d690b-4286-3a99-b734-9b92c3b5661d.json b/test/data/enm/study-FCSV-054d690b-4286-3a99-b734-9b92c3b5661d.json
deleted file mode 100644
index e0d7a4f..0000000
--- a/test/data/enm/study-FCSV-054d690b-4286-3a99-b734-9b92c3b5661d.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-054d690b-4286-3a99-b734-9b92c3b5661d",
- "owner": {
- "substance": {
- "uuid": "FCSV-9505d90b-f90b-3c94-a6cc-e4ee4c8ec46f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-05add2f1-d50b-3583-bb2c-411c571b32ad.json b/test/data/enm/study-FCSV-05add2f1-d50b-3583-bb2c-411c571b32ad.json
deleted file mode 100644
index 81d19c4..0000000
--- a/test/data/enm/study-FCSV-05add2f1-d50b-3583-bb2c-411c571b32ad.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-05add2f1-d50b-3583-bb2c-411c571b32ad",
- "owner": {
- "substance": {
- "uuid": "FCSV-d6c56b3e-71a2-330b-92b6-9c90e6046eaa"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -27.78,
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- },
- {
- "endpoint": "ZETA POTENTIAL",
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- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -11.65,
- "errQualifier": "sd",
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- }
- }
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diff --git a/test/data/enm/study-FCSV-06605501-15bf-3f2c-a8d8-1d86b4aeada2.json b/test/data/enm/study-FCSV-06605501-15bf-3f2c-a8d8-1d86b4aeada2.json
deleted file mode 100644
index e4ac6ef..0000000
--- a/test/data/enm/study-FCSV-06605501-15bf-3f2c-a8d8-1d86b4aeada2.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-06605501-15bf-3f2c-a8d8-1d86b4aeada2",
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- },
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- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- },
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- "loQualifier": "mean",
- "loValue": 0.019,
- "errQualifier": "sd",
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- },
- {
- "endpoint": "Log2 transformed",
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diff --git a/test/data/enm/study-FCSV-066368b1-5565-38bc-ae30-9f27711ccb80.json b/test/data/enm/study-FCSV-066368b1-5565-38bc-ae30-9f27711ccb80.json
deleted file mode 100644
index 6f71f5b..0000000
--- a/test/data/enm/study-FCSV-066368b1-5565-38bc-ae30-9f27711ccb80.json
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-{
- "uuid": "FCSV-066368b1-5565-38bc-ae30-9f27711ccb80",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
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- "endpoint": "Description",
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- },
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- "TYPE": {
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- "loValue": "CORE"
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- "textValue": "[Au]"
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diff --git a/test/data/enm/study-FCSV-06ab6610-bb14-3776-ae45-b9c87545f54f.json b/test/data/enm/study-FCSV-06ab6610-bb14-3776-ae45-b9c87545f54f.json
deleted file mode 100644
index 41498de..0000000
--- a/test/data/enm/study-FCSV-06ab6610-bb14-3776-ae45-b9c87545f54f.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-06ab6610-bb14-3776-ae45-b9c87545f54f",
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- },
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- "year": "2014",
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- },
- "protocol": {
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- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
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- "endpoint": "Bicinchoninic Acid (BCA) Assay",
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diff --git a/test/data/enm/study-FCSV-06b6bc1a-68b0-307f-b508-f68bc64c4e52.json b/test/data/enm/study-FCSV-06b6bc1a-68b0-307f-b508-f68bc64c4e52.json
deleted file mode 100644
index d3ad081..0000000
--- a/test/data/enm/study-FCSV-06b6bc1a-68b0-307f-b508-f68bc64c4e52.json
+++ /dev/null
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-{
- "uuid": "FCSV-06b6bc1a-68b0-307f-b508-f68bc64c4e52",
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- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
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- "endpoint": "ICP-AES",
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- "doi: 10.1021/nn406018q"
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diff --git a/test/data/enm/study-FCSV-06facf9c-8b22-31c6-9c4a-163295dd24fe.json b/test/data/enm/study-FCSV-06facf9c-8b22-31c6-9c4a-163295dd24fe.json
deleted file mode 100644
index 85bc741..0000000
--- a/test/data/enm/study-FCSV-06facf9c-8b22-31c6-9c4a-163295dd24fe.json
+++ /dev/null
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-{
- "uuid": "FCSV-06facf9c-8b22-31c6-9c4a-163295dd24fe",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- "year": "2014",
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- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
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- },
- "result": {
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- "loQualifier": "mean",
- "loValue": -23.58,
- "errQualifier": "sd",
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- {
- "endpoint": "ZETA POTENTIAL",
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diff --git a/test/data/enm/study-FCSV-0712e45a-e412-34fd-8d36-4ef82963b9d7.json b/test/data/enm/study-FCSV-0712e45a-e412-34fd-8d36-4ef82963b9d7.json
deleted file mode 100644
index a42ab22..0000000
--- a/test/data/enm/study-FCSV-0712e45a-e412-34fd-8d36-4ef82963b9d7.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-0712e45a-e412-34fd-8d36-4ef82963b9d7",
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- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
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- "endpoint": "ICP-AES",
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diff --git a/test/data/enm/study-FCSV-0729bece-9da2-3119-b1a8-f64ca8b17ad6.json b/test/data/enm/study-FCSV-0729bece-9da2-3119-b1a8-f64ca8b17ad6.json
deleted file mode 100644
index 1bac112..0000000
--- a/test/data/enm/study-FCSV-0729bece-9da2-3119-b1a8-f64ca8b17ad6.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-0729bece-9da2-3119-b1a8-f64ca8b17ad6",
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-079c4f57-edef-3197-b838-566877e5aa71.json b/test/data/enm/study-FCSV-079c4f57-edef-3197-b838-566877e5aa71.json
deleted file mode 100644
index 95a1eaa..0000000
--- a/test/data/enm/study-FCSV-079c4f57-edef-3197-b838-566877e5aa71.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-079c4f57-edef-3197-b838-566877e5aa71",
- "owner": {
- "substance": {
- "uuid": "FCSV-f0cbcba3-1cb5-3fa5-82cc-bfd9d1afa21d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.012,
- "errQualifier": "sd",
- "errorValue": 0.004
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
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- }
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diff --git a/test/data/enm/study-FCSV-07d5cc09-b629-3107-a01e-8df8bda05362.json b/test/data/enm/study-FCSV-07d5cc09-b629-3107-a01e-8df8bda05362.json
deleted file mode 100644
index e82caf1..0000000
--- a/test/data/enm/study-FCSV-07d5cc09-b629-3107-a01e-8df8bda05362.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-07d5cc09-b629-3107-a01e-8df8bda05362",
- "owner": {
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
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- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- },
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- "r_isUsedforClassification": "false",
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- "result": {
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- }
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- "endpoint": "Total surface area (SAtot)",
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- "result": {
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- "loQualifier": "mean",
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- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
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- }
- ]
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diff --git a/test/data/enm/study-FCSV-08094529-fb71-36b3-a27b-6d5063dec574.json b/test/data/enm/study-FCSV-08094529-fb71-36b3-a27b-6d5063dec574.json
deleted file mode 100644
index b445ed6..0000000
--- a/test/data/enm/study-FCSV-08094529-fb71-36b3-a27b-6d5063dec574.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-08094529-fb71-36b3-a27b-6d5063dec574",
- "owner": {
- "substance": {
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
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- ""
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
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- "loValue": "FUNCTIONALIZATION"
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- },
- "result": {
- "unit": null,
- "textValue": "N-(2-Mercaptopropionyl)glycine"
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diff --git a/test/data/enm/study-FCSV-0853f2ba-bde2-3bea-8058-2a37ba96e530.json b/test/data/enm/study-FCSV-0853f2ba-bde2-3bea-8058-2a37ba96e530.json
deleted file mode 100644
index 362f434..0000000
--- a/test/data/enm/study-FCSV-0853f2ba-bde2-3bea-8058-2a37ba96e530.json
+++ /dev/null
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-{
- "uuid": "FCSV-0853f2ba-bde2-3bea-8058-2a37ba96e530",
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- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
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- "result": {
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- "loValue": 197
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- "result": {
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diff --git a/test/data/enm/study-FCSV-08812ca8-fd9a-328b-974b-0ca0452a1194.json b/test/data/enm/study-FCSV-08812ca8-fd9a-328b-974b-0ca0452a1194.json
deleted file mode 100644
index 257f58e..0000000
--- a/test/data/enm/study-FCSV-08812ca8-fd9a-328b-974b-0ca0452a1194.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-08812ca8-fd9a-328b-974b-0ca0452a1194",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- "year": "2014",
- "owner": null
- },
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- "category": {
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- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
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- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
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- "errQualifier": "sd",
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- {
- "endpoint": "LSPR peak position (nm)",
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- "loQualifier": "mean",
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- "errQualifier": "sd",
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diff --git a/test/data/enm/study-FCSV-088a2360-b820-3586-a181-74aba9a72419.json b/test/data/enm/study-FCSV-088a2360-b820-3586-a181-74aba9a72419.json
deleted file mode 100644
index 2b0b360..0000000
--- a/test/data/enm/study-FCSV-088a2360-b820-3586-a181-74aba9a72419.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-088a2360-b820-3586-a181-74aba9a72419",
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- }
- },
- "citation": {
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- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
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- "endpoint": "TEM",
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diff --git a/test/data/enm/study-FCSV-088a789f-a5ed-3fb7-a867-e4cbc5b133a3.json b/test/data/enm/study-FCSV-088a789f-a5ed-3fb7-a867-e4cbc5b133a3.json
deleted file mode 100644
index 4f90cb6..0000000
--- a/test/data/enm/study-FCSV-088a789f-a5ed-3fb7-a867-e4cbc5b133a3.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-088a789f-a5ed-3fb7-a867-e4cbc5b133a3",
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- "endpoint": "Protein density",
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- "result": {
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diff --git a/test/data/enm/study-FCSV-089fd58b-4acc-3739-8fed-a0bda28263ae.json b/test/data/enm/study-FCSV-089fd58b-4acc-3739-8fed-a0bda28263ae.json
deleted file mode 100644
index dc02404..0000000
--- a/test/data/enm/study-FCSV-089fd58b-4acc-3739-8fed-a0bda28263ae.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-089fd58b-4acc-3739-8fed-a0bda28263ae",
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- "year": "2014",
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diff --git a/test/data/enm/study-FCSV-0905012d-b952-3128-a267-bc0d2e6af782.json b/test/data/enm/study-FCSV-0905012d-b952-3128-a267-bc0d2e6af782.json
deleted file mode 100644
index 71a85da..0000000
--- a/test/data/enm/study-FCSV-0905012d-b952-3128-a267-bc0d2e6af782.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-0905012d-b952-3128-a267-bc0d2e6af782",
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- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-092d11f8-4704-3a20-9a10-fd8c34dcb01d.json b/test/data/enm/study-FCSV-092d11f8-4704-3a20-9a10-fd8c34dcb01d.json
deleted file mode 100644
index 0528472..0000000
--- a/test/data/enm/study-FCSV-092d11f8-4704-3a20-9a10-fd8c34dcb01d.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-092d11f8-4704-3a20-9a10-fd8c34dcb01d",
- "owner": {
- "substance": {
- "uuid": "FCSV-0d5c0fc7-de56-3507-b651-1c91bf030465"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-09481045-6415-3fe4-865f-ee1aaef04fc8.json b/test/data/enm/study-FCSV-09481045-6415-3fe4-865f-ee1aaef04fc8.json
deleted file mode 100644
index aea21cc..0000000
--- a/test/data/enm/study-FCSV-09481045-6415-3fe4-865f-ee1aaef04fc8.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-09481045-6415-3fe4-865f-ee1aaef04fc8",
- "owner": {
- "substance": {
- "uuid": "FCSV-1180669a-fc30-3bc1-b53e-6a200c4248e4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.008,
- "errQualifier": "sd",
- "errorValue": 0.004
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -6.965,
- "errQualifier": "std",
- "errorValue": 0.763
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-095a2402-ed58-355e-8cf0-5706cd50104d.json b/test/data/enm/study-FCSV-095a2402-ed58-355e-8cf0-5706cd50104d.json
deleted file mode 100644
index f48365b..0000000
--- a/test/data/enm/study-FCSV-095a2402-ed58-355e-8cf0-5706cd50104d.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-095a2402-ed58-355e-8cf0-5706cd50104d",
- "owner": {
- "substance": {
- "uuid": "FCSV-6d8b8701-7fca-3936-a45e-66c17012fc75"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.06,
- "errQualifier": "sd",
- "errorValue": 0.007
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -4.067,
- "errQualifier": "std",
- "errorValue": 0.168
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0980ee42-19c7-3dc5-91d0-4243460c8f18.json b/test/data/enm/study-FCSV-0980ee42-19c7-3dc5-91d0-4243460c8f18.json
deleted file mode 100644
index 733d7d2..0000000
--- a/test/data/enm/study-FCSV-0980ee42-19c7-3dc5-91d0-4243460c8f18.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-0980ee42-19c7-3dc5-91d0-4243460c8f18",
- "owner": {
- "substance": {
- "uuid": "FCSV-cb2f11a0-4af8-318b-8a60-3908f45c2e65"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 43.58,
- "errQualifier": "sd",
- "errorValue": 0.56
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 61.43,
- "errQualifier": "sd",
- "errorValue": 2.5
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 40.07,
- "errQualifier": "sd",
- "errorValue": 2.72
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23.48,
- "errQualifier": "sd",
- "errorValue": 1.34
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 49.23,
- "errQualifier": "sd",
- "errorValue": 3.69
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 18.1,
- "errQualifier": "sd",
- "errorValue": 1.47
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 49.23,
- "errQualifier": "sd",
- "errorValue": 2.02
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 73.47,
- "errQualifier": "sd",
- "errorValue": 7.73
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-098da3b7-51a2-3adf-9cc1-0f18b15553c5.json b/test/data/enm/study-FCSV-098da3b7-51a2-3adf-9cc1-0f18b15553c5.json
deleted file mode 100644
index dc17a3d..0000000
--- a/test/data/enm/study-FCSV-098da3b7-51a2-3adf-9cc1-0f18b15553c5.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-098da3b7-51a2-3adf-9cc1-0f18b15553c5",
- "owner": {
- "substance": {
- "uuid": "FCSV-206b1a13-e02a-38a0-88ec-d5a8bfdabc55"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-09caf2b1-29e1-3f69-8d68-3ccbd640cf35.json b/test/data/enm/study-FCSV-09caf2b1-29e1-3f69-8d68-3ccbd640cf35.json
deleted file mode 100644
index cfc9a20..0000000
--- a/test/data/enm/study-FCSV-09caf2b1-29e1-3f69-8d68-3ccbd640cf35.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "FCSV-09caf2b1-29e1-3f69-8d68-3ccbd640cf35",
- "owner": {
- "substance": {
- "uuid": "FCSV-eec391e5-065c-32c1-89ca-3eb40260c1a8"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.078
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0a443119-bd16-38d0-9b1e-515ab06d8513.json b/test/data/enm/study-FCSV-0a443119-bd16-38d0-9b1e-515ab06d8513.json
deleted file mode 100644
index 3e8ff17..0000000
--- a/test/data/enm/study-FCSV-0a443119-bd16-38d0-9b1e-515ab06d8513.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-0a443119-bd16-38d0-9b1e-515ab06d8513",
- "owner": {
- "substance": {
- "uuid": "FCSV-9505d90b-f90b-3c94-a6cc-e4ee4c8ec46f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 208.318,
- "errQualifier": "sd",
- "errorValue": 22.354
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.026
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0a801292-742e-33a6-8afd-443149d7397d.json b/test/data/enm/study-FCSV-0a801292-742e-33a6-8afd-443149d7397d.json
deleted file mode 100644
index 71c6b4a..0000000
--- a/test/data/enm/study-FCSV-0a801292-742e-33a6-8afd-443149d7397d.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-0a801292-742e-33a6-8afd-443149d7397d",
- "owner": {
- "substance": {
- "uuid": "FCSV-45779e93-a25d-39cc-9294-afc0b59f3cd6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.004,
- "errQualifier": "sd",
- "errorValue": 0.007
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -7.887,
- "errQualifier": "std",
- "errorValue": 2.499
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0aa39fb6-268c-3e08-9b5b-dbd66fb4086d.json b/test/data/enm/study-FCSV-0aa39fb6-268c-3e08-9b5b-dbd66fb4086d.json
deleted file mode 100644
index dbb1571..0000000
--- a/test/data/enm/study-FCSV-0aa39fb6-268c-3e08-9b5b-dbd66fb4086d.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-0aa39fb6-268c-3e08-9b5b-dbd66fb4086d",
- "owner": {
- "substance": {
- "uuid": "FCSV-05f4c488-5326-3d8a-be41-c57c468b2fa4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.144,
- "errQualifier": "sd",
- "errorValue": 0.204
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0aa6b29b-aa17-35b8-8b13-b922b4480a2b.json b/test/data/enm/study-FCSV-0aa6b29b-aa17-35b8-8b13-b922b4480a2b.json
deleted file mode 100644
index cc8f2c8..0000000
--- a/test/data/enm/study-FCSV-0aa6b29b-aa17-35b8-8b13-b922b4480a2b.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-0aa6b29b-aa17-35b8-8b13-b922b4480a2b",
- "owner": {
- "substance": {
- "uuid": "FCSV-8dc5c24b-2e89-3833-b94d-920674a956a0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 266.113,
- "errQualifier": "sd",
- "errorValue": 7.691
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.023
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0aae2065-25a6-340b-83d5-d19170542b01.json b/test/data/enm/study-FCSV-0aae2065-25a6-340b-83d5-d19170542b01.json
deleted file mode 100644
index 9f69434..0000000
--- a/test/data/enm/study-FCSV-0aae2065-25a6-340b-83d5-d19170542b01.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-0aae2065-25a6-340b-83d5-d19170542b01",
- "owner": {
- "substance": {
- "uuid": "FCSV-9e599ca9-9a8f-3094-a97b-3fb35b08a82a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Mercaptoacetic acid"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0b439f6f-2276-333c-bb89-a4a38b73ae24.json b/test/data/enm/study-FCSV-0b439f6f-2276-333c-bb89-a4a38b73ae24.json
deleted file mode 100644
index 10fab81..0000000
--- a/test/data/enm/study-FCSV-0b439f6f-2276-333c-bb89-a4a38b73ae24.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-0b439f6f-2276-333c-bb89-a4a38b73ae24",
- "owner": {
- "substance": {
- "uuid": "FCSV-50aee86c-a3a2-3c46-86bf-5ac25485fc13"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 440.653,
- "errQualifier": "sd",
- "errorValue": 5.239
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.041
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0b72a33f-e101-37c6-a3fc-f6d20ca8a2ce.json b/test/data/enm/study-FCSV-0b72a33f-e101-37c6-a3fc-f6d20ca8a2ce.json
deleted file mode 100644
index 9ca6c5c..0000000
--- a/test/data/enm/study-FCSV-0b72a33f-e101-37c6-a3fc-f6d20ca8a2ce.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-0b72a33f-e101-37c6-a3fc-f6d20ca8a2ce",
- "owner": {
- "substance": {
- "uuid": "FCSV-bdd4c371-ffec-34f1-ae5b-2c60d243e867"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 114.39,
- "errQualifier": "sd",
- "errorValue": 9.92
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 110.75,
- "errQualifier": "sd",
- "errorValue": 5.41
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 176.86,
- "errQualifier": "sd",
- "errorValue": 108.92
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 372.23,
- "errQualifier": "sd",
- "errorValue": 460.88
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 130.74,
- "errQualifier": "sd",
- "errorValue": 12.68
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 97.67,
- "errQualifier": "sd",
- "errorValue": 6.3
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 130.74,
- "errQualifier": "sd",
- "errorValue": 18.85
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 125.71,
- "errQualifier": "sd",
- "errorValue": 23.82
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0b8cb05d-a9fd-31d4-bb9c-0675ade8206f.json b/test/data/enm/study-FCSV-0b8cb05d-a9fd-31d4-bb9c-0675ade8206f.json
deleted file mode 100644
index c21d9fa..0000000
--- a/test/data/enm/study-FCSV-0b8cb05d-a9fd-31d4-bb9c-0675ade8206f.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-0b8cb05d-a9fd-31d4-bb9c-0675ade8206f",
- "owner": {
- "substance": {
- "uuid": "FCSV-4dd1bf89-e885-3128-abe2-9a87fbbd0242"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 739.065,
- "errQualifier": "sd",
- "errorValue": 22.825
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 8,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.002
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0b9e9de8-59ef-3093-bbe9-1f5392e3ce9a.json b/test/data/enm/study-FCSV-0b9e9de8-59ef-3093-bbe9-1f5392e3ce9a.json
deleted file mode 100644
index 39d2854..0000000
--- a/test/data/enm/study-FCSV-0b9e9de8-59ef-3093-bbe9-1f5392e3ce9a.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-0b9e9de8-59ef-3093-bbe9-1f5392e3ce9a",
- "owner": {
- "substance": {
- "uuid": "FCSV-d1731b11-29a7-3b39-bf48-000a31d9c46b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 247.743,
- "errQualifier": "sd",
- "errorValue": 1.257
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.014
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0bae6816-b58d-3a7f-b4bf-fca8cb86a6b5.json b/test/data/enm/study-FCSV-0bae6816-b58d-3a7f-b4bf-fca8cb86a6b5.json
deleted file mode 100644
index 089f58f..0000000
--- a/test/data/enm/study-FCSV-0bae6816-b58d-3a7f-b4bf-fca8cb86a6b5.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-0bae6816-b58d-3a7f-b4bf-fca8cb86a6b5",
- "owner": {
- "substance": {
- "uuid": "FCSV-770a2d39-1509-3c93-b28f-1d3e345de450"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.267,
- "errQualifier": "sd",
- "errorValue": 0.042
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.278,
- "errQualifier": "sd",
- "errorValue": 0.063
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 519.73,
- "errQualifier": "sd",
- "errorValue": 0.12
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0bb09e83-cc7a-3b95-85ca-63615e079776.json b/test/data/enm/study-FCSV-0bb09e83-cc7a-3b95-85ca-63615e079776.json
deleted file mode 100644
index f19ea57..0000000
--- a/test/data/enm/study-FCSV-0bb09e83-cc7a-3b95-85ca-63615e079776.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-0bb09e83-cc7a-3b95-85ca-63615e079776",
- "owner": {
- "substance": {
- "uuid": "FCSV-e5b47d9a-ba9d-3310-8f92-72aad8f0364d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
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- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 637.528,
- "errQualifier": "sd",
- "errorValue": 19.79
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.009
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0bd3f45d-9fec-3632-ab89-039d252e53b3.json b/test/data/enm/study-FCSV-0bd3f45d-9fec-3632-ab89-039d252e53b3.json
deleted file mode 100644
index abe5bff..0000000
--- a/test/data/enm/study-FCSV-0bd3f45d-9fec-3632-ab89-039d252e53b3.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-0bd3f45d-9fec-3632-ab89-039d252e53b3",
- "owner": {
- "substance": {
- "uuid": "FCSV-d677545a-5079-3793-8990-4061a6b254c5"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
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- "r_studyResultType": "experimental result",
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- "effects": [
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- "endpoint": "Core size",
- "conditions": {
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
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- "result": {
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- "loValue": 0.0
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- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0c4b4c26-e2ee-387b-9786-b2c911d43ba6.json b/test/data/enm/study-FCSV-0c4b4c26-e2ee-387b-9786-b2c911d43ba6.json
deleted file mode 100644
index 04cf209..0000000
--- a/test/data/enm/study-FCSV-0c4b4c26-e2ee-387b-9786-b2c911d43ba6.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-0c4b4c26-e2ee-387b-9786-b2c911d43ba6",
- "owner": {
- "substance": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.34,
- "errQualifier": "sd",
- "errorValue": 0.071
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.267,
- "errQualifier": "sd",
- "errorValue": 0.031
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0c5d6106-834b-369e-af18-3e32f38a75f9.json b/test/data/enm/study-FCSV-0c5d6106-834b-369e-af18-3e32f38a75f9.json
deleted file mode 100644
index 7edeaf9..0000000
--- a/test/data/enm/study-FCSV-0c5d6106-834b-369e-af18-3e32f38a75f9.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-0c5d6106-834b-369e-af18-3e32f38a75f9",
- "owner": {
- "substance": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
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- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 976.148,
- "errQualifier": "sd",
- "errorValue": 54.364
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.016
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0c945a33-c8aa-3d6e-9261-7e5fd8cc9e0b.json b/test/data/enm/study-FCSV-0c945a33-c8aa-3d6e-9261-7e5fd8cc9e0b.json
deleted file mode 100644
index f6ffdaf..0000000
--- a/test/data/enm/study-FCSV-0c945a33-c8aa-3d6e-9261-7e5fd8cc9e0b.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-0c945a33-c8aa-3d6e-9261-7e5fd8cc9e0b",
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
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- },
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- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.004,
- "errQualifier": "sd",
- "errorValue": 0.007
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": -7.858,
- "errQualifier": "std",
- "errorValue": 2.499
- }
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diff --git a/test/data/enm/study-FCSV-0cbcf19b-4f45-337c-af43-21b44bd8a622.json b/test/data/enm/study-FCSV-0cbcf19b-4f45-337c-af43-21b44bd8a622.json
deleted file mode 100644
index e367602..0000000
--- a/test/data/enm/study-FCSV-0cbcf19b-4f45-337c-af43-21b44bd8a622.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-0cbcf19b-4f45-337c-af43-21b44bd8a622",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
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- "effects": [
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- "result": {
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- "loQualifier": "mean",
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- },
- {
- "endpoint": "Density",
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- "result": {
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- "loValue": 19.1
- }
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- {
- "endpoint": "MW",
- "conditions": {
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- "Remark": null,
- "SEQ_NUM": null
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- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
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- {
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- "conditions": {
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- "Remark": null,
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- "loValue": 0.0
- }
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- {
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- "result": {
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diff --git a/test/data/enm/study-FCSV-0ce0523f-8e2a-3347-ad5b-222d952fc713.json b/test/data/enm/study-FCSV-0ce0523f-8e2a-3347-ad5b-222d952fc713.json
deleted file mode 100644
index 5856e89..0000000
--- a/test/data/enm/study-FCSV-0ce0523f-8e2a-3347-ad5b-222d952fc713.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-0ce0523f-8e2a-3347-ad5b-222d952fc713",
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- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
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- },
- "effects": [
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- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 4.913,
- "errQualifier": "sd",
- "errorValue": 0.7
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-0cf37dce-7276-32f5-8e09-efa63fee09f6.json b/test/data/enm/study-FCSV-0cf37dce-7276-32f5-8e09-efa63fee09f6.json
deleted file mode 100644
index 44acbe7..0000000
--- a/test/data/enm/study-FCSV-0cf37dce-7276-32f5-8e09-efa63fee09f6.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-0cf37dce-7276-32f5-8e09-efa63fee09f6",
- "owner": {
- "substance": {
- "uuid": "FCSV-07629748-9b8e-381b-a4e6-79b495404e02"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.148,
- "errQualifier": "sd",
- "errorValue": 0.017
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -2.753,
- "errQualifier": "std",
- "errorValue": 0.169
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0d864215-cd43-3b26-9b0f-1f72a1fb45f1.json b/test/data/enm/study-FCSV-0d864215-cd43-3b26-9b0f-1f72a1fb45f1.json
deleted file mode 100644
index a2dcdac..0000000
--- a/test/data/enm/study-FCSV-0d864215-cd43-3b26-9b0f-1f72a1fb45f1.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-0d864215-cd43-3b26-9b0f-1f72a1fb45f1",
- "owner": {
- "substance": {
- "uuid": "FCSV-8b5b62c3-7fd2-3bba-b293-b7537e4971b1"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -41.68,
- "errQualifier": "sd",
- "errorValue": 6.68
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -6.52,
- "errQualifier": "sd",
- "errorValue": 1.74
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0dce67ea-3a84-3848-8a36-b33db2d30c42.json b/test/data/enm/study-FCSV-0dce67ea-3a84-3848-8a36-b33db2d30c42.json
deleted file mode 100644
index 5d28a36..0000000
--- a/test/data/enm/study-FCSV-0dce67ea-3a84-3848-8a36-b33db2d30c42.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-0dce67ea-3a84-3848-8a36-b33db2d30c42",
- "owner": {
- "substance": {
- "uuid": "FCSV-7ad8c003-d0ee-3ea6-9374-b6e4d2f33401"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 59.3,
- "errQualifier": "sd",
- "errorValue": 6.4
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0e231761-2749-3416-ad8a-6982e4f0bb8c.json b/test/data/enm/study-FCSV-0e231761-2749-3416-ad8a-6982e4f0bb8c.json
deleted file mode 100644
index ca3c740..0000000
--- a/test/data/enm/study-FCSV-0e231761-2749-3416-ad8a-6982e4f0bb8c.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-0e231761-2749-3416-ad8a-6982e4f0bb8c",
- "owner": {
- "substance": {
- "uuid": "FCSV-e4b9ce55-bbeb-368b-a1d4-e591b7df742e"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
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- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 438.801,
- "errQualifier": "sd",
- "errorValue": 5.24
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.042
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0e66fbda-6570-339b-b23a-68dacd14baa7.json b/test/data/enm/study-FCSV-0e66fbda-6570-339b-b23a-68dacd14baa7.json
deleted file mode 100644
index adf6bf4..0000000
--- a/test/data/enm/study-FCSV-0e66fbda-6570-339b-b23a-68dacd14baa7.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-0e66fbda-6570-339b-b23a-68dacd14baa7",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.267,
- "errQualifier": "sd",
- "errorValue": 0.013
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.311,
- "errQualifier": "sd",
- "errorValue": 0.024
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 541.97,
- "errQualifier": "sd",
- "errorValue": 1.27
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-0e8e694c-efce-32b2-9631-7e8f52de2cc3.json b/test/data/enm/study-FCSV-0e8e694c-efce-32b2-9631-7e8f52de2cc3.json
deleted file mode 100644
index bd11192..0000000
--- a/test/data/enm/study-FCSV-0e8e694c-efce-32b2-9631-7e8f52de2cc3.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-0e8e694c-efce-32b2-9631-7e8f52de2cc3",
- "owner": {
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- "uuid": "FCSV-9bf04ec0-f6b6-30a6-8970-19a51968532e"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 2.126,
- "errQualifier": "sd",
- "errorValue": 1.172
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-0ec3b4e0-bba3-3e17-aeb7-37d4432ca982.json b/test/data/enm/study-FCSV-0ec3b4e0-bba3-3e17-aeb7-37d4432ca982.json
deleted file mode 100644
index fcd145f..0000000
--- a/test/data/enm/study-FCSV-0ec3b4e0-bba3-3e17-aeb7-37d4432ca982.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-0ec3b4e0-bba3-3e17-aeb7-37d4432ca982",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
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- "interpretation": {
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- },
- "effects": [
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 252.88,
- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 61.79,
- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 379.63,
- "errQualifier": "sd",
- "errorValue": 370.51
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 181.76,
- "errQualifier": "sd",
- "errorValue": 192.79
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
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- },
- "result": {
- "unit": "nm",
- "loValue": 321.41,
- "errQualifier": "sd",
- "errorValue": 118.08
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 32.61,
- "errQualifier": "sd",
- "errorValue": 8.91
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 321.41,
- "errQualifier": "sd",
- "errorValue": 335.73
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 87.24,
- "errQualifier": "sd",
- "errorValue": 6.93
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0f4aff5a-e659-3a82-8b57-570ff7f562f4.json b/test/data/enm/study-FCSV-0f4aff5a-e659-3a82-8b57-570ff7f562f4.json
deleted file mode 100644
index fbdc0c5..0000000
--- a/test/data/enm/study-FCSV-0f4aff5a-e659-3a82-8b57-570ff7f562f4.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-0f4aff5a-e659-3a82-8b57-570ff7f562f4",
- "owner": {
- "substance": {
- "uuid": "FCSV-3adf8c83-83b1-3ffa-8868-b8527d83923b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 426.751,
- "errQualifier": "sd",
- "errorValue": 11.8
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 8,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.015
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0f716b3b-b1e4-3ff4-8fa6-737435a7b678.json b/test/data/enm/study-FCSV-0f716b3b-b1e4-3ff4-8fa6-737435a7b678.json
deleted file mode 100644
index 174665c..0000000
--- a/test/data/enm/study-FCSV-0f716b3b-b1e4-3ff4-8fa6-737435a7b678.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-0f716b3b-b1e4-3ff4-8fa6-737435a7b678",
- "owner": {
- "substance": {
- "uuid": "FCSV-ed95bb69-9fa7-3a4a-b4a4-32dd947d4d1a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 1.081,
- "errQualifier": "sd",
- "errorValue": 0.403
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.113,
- "errQualifier": "std",
- "errorValue": 0.537
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-0fe8172e-785c-35c4-ae4d-4372c5218024.json b/test/data/enm/study-FCSV-0fe8172e-785c-35c4-ae4d-4372c5218024.json
deleted file mode 100644
index e2e8706..0000000
--- a/test/data/enm/study-FCSV-0fe8172e-785c-35c4-ae4d-4372c5218024.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-0fe8172e-785c-35c4-ae4d-4372c5218024",
- "owner": {
- "substance": {
- "uuid": "FCSV-4026a85b-f254-3d35-bd77-c634d38e4a22"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 255.557,
- "errQualifier": "sd",
- "errorValue": 0.105
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.009
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-100207f0-3500-395a-82e5-87bdac87e63c.json b/test/data/enm/study-FCSV-100207f0-3500-395a-82e5-87bdac87e63c.json
deleted file mode 100644
index addfd41..0000000
--- a/test/data/enm/study-FCSV-100207f0-3500-395a-82e5-87bdac87e63c.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-100207f0-3500-395a-82e5-87bdac87e63c",
- "owner": {
- "substance": {
- "uuid": "FCSV-9b1b9ad6-e41d-3ddd-8bea-561af1fc27aa"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 36.85,
- "errQualifier": "sd",
- "errorValue": 0.28
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 52.96,
- "errQualifier": "sd",
- "errorValue": 3.22
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 220.5,
- "errQualifier": "sd",
- "errorValue": 252.07
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 153,
- "errQualifier": "sd",
- "errorValue": 134.73
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 106.06,
- "errQualifier": "sd",
- "errorValue": 1.63
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 33.38,
- "errQualifier": "sd",
- "errorValue": 2.1
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 106.06,
- "errQualifier": "sd",
- "errorValue": 91.92
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 86.22,
- "errQualifier": "sd",
- "errorValue": 30.06
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1003bd7a-fb1b-3903-890d-02dd262e9c0d.json b/test/data/enm/study-FCSV-1003bd7a-fb1b-3903-890d-02dd262e9c0d.json
deleted file mode 100644
index 2deb574..0000000
--- a/test/data/enm/study-FCSV-1003bd7a-fb1b-3903-890d-02dd262e9c0d.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-1003bd7a-fb1b-3903-890d-02dd262e9c0d",
- "owner": {
- "substance": {
- "uuid": "FCSV-770a2d39-1509-3c93-b28f-1d3e345de450"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.64,
- "errQualifier": "sd",
- "errorValue": 0.12
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-10199acf-e30a-391c-8a60-500fa69f5e89.json b/test/data/enm/study-FCSV-10199acf-e30a-391c-8a60-500fa69f5e89.json
deleted file mode 100644
index 8c6f320..0000000
--- a/test/data/enm/study-FCSV-10199acf-e30a-391c-8a60-500fa69f5e89.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-10199acf-e30a-391c-8a60-500fa69f5e89",
- "owner": {
- "substance": {
- "uuid": "FCSV-6405ef25-683e-3763-a4e3-f56eb93174e4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-10341973-b4ae-325d-83b3-e0f2ccf4b1c6.json b/test/data/enm/study-FCSV-10341973-b4ae-325d-83b3-e0f2ccf4b1c6.json
deleted file mode 100644
index 14ce770..0000000
--- a/test/data/enm/study-FCSV-10341973-b4ae-325d-83b3-e0f2ccf4b1c6.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-10341973-b4ae-325d-83b3-e0f2ccf4b1c6",
- "owner": {
- "substance": {
- "uuid": "FCSV-9b1b9ad6-e41d-3ddd-8bea-561af1fc27aa"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-10542832-b372-3663-967b-64ab6fd4f59e.json b/test/data/enm/study-FCSV-10542832-b372-3663-967b-64ab6fd4f59e.json
deleted file mode 100644
index 38372bc..0000000
--- a/test/data/enm/study-FCSV-10542832-b372-3663-967b-64ab6fd4f59e.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-10542832-b372-3663-967b-64ab6fd4f59e",
- "owner": {
- "substance": {
- "uuid": "FCSV-fb5e6048-8ee1-351d-915b-d1669681357e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.31,
- "errQualifier": "sd",
- "errorValue": 0.031
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.367,
- "errQualifier": "sd",
- "errorValue": 0.03
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 521.43,
- "errQualifier": "sd",
- "errorValue": 0.29
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-107a45ba-60ed-321c-8604-e2018acbf0e9.json b/test/data/enm/study-FCSV-107a45ba-60ed-321c-8604-e2018acbf0e9.json
deleted file mode 100644
index 789bfa1..0000000
--- a/test/data/enm/study-FCSV-107a45ba-60ed-321c-8604-e2018acbf0e9.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-107a45ba-60ed-321c-8604-e2018acbf0e9",
- "owner": {
- "substance": {
- "uuid": "FCSV-6405ef25-683e-3763-a4e3-f56eb93174e4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
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- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 23.9,
- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
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- "unit": "nm",
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- }
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- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23.23,
- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
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- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 41.61,
- "errQualifier": "sd",
- "errorValue": 2.22
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 25.21,
- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 39.84,
- "errQualifier": "sd",
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- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
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- "result": {
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- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 43.85,
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diff --git a/test/data/enm/study-FCSV-108b37af-f1d9-33d1-a4c2-ffdb6c38aa40.json b/test/data/enm/study-FCSV-108b37af-f1d9-33d1-a4c2-ffdb6c38aa40.json
deleted file mode 100644
index 4085759..0000000
--- a/test/data/enm/study-FCSV-108b37af-f1d9-33d1-a4c2-ffdb6c38aa40.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-108b37af-f1d9-33d1-a4c2-ffdb6c38aa40",
- "owner": {
- "substance": {
- "uuid": "FCSV-1c9a58a0-cd91-3636-8f7c-4fd886f8593a"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
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- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-10ccff7a-7f93-3ccc-b288-b2ddf5cfed42.json b/test/data/enm/study-FCSV-10ccff7a-7f93-3ccc-b288-b2ddf5cfed42.json
deleted file mode 100644
index 9c0f2ef..0000000
--- a/test/data/enm/study-FCSV-10ccff7a-7f93-3ccc-b288-b2ddf5cfed42.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-10ccff7a-7f93-3ccc-b288-b2ddf5cfed42",
- "owner": {
- "substance": {
- "uuid": "FCSV-9c9a7234-a74f-326f-a134-79e004c1f687"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Poly(vinyl alcohol)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-10e0a115-5215-3a03-bf83-d2a76090c76e.json b/test/data/enm/study-FCSV-10e0a115-5215-3a03-bf83-d2a76090c76e.json
deleted file mode 100644
index 0c49a51..0000000
--- a/test/data/enm/study-FCSV-10e0a115-5215-3a03-bf83-d2a76090c76e.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-10e0a115-5215-3a03-bf83-d2a76090c76e",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f5e6fcb-23b9-3222-aa6e-4afcbba47715"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 688.318,
- "errQualifier": "sd",
- "errorValue": 52.278
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.04
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-10ecce98-5d9a-33f4-b0ff-52e746fc2d6e.json b/test/data/enm/study-FCSV-10ecce98-5d9a-33f4-b0ff-52e746fc2d6e.json
deleted file mode 100644
index 76a55aa..0000000
--- a/test/data/enm/study-FCSV-10ecce98-5d9a-33f4-b0ff-52e746fc2d6e.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-10ecce98-5d9a-33f4-b0ff-52e746fc2d6e",
- "owner": {
- "substance": {
- "uuid": "FCSV-9bf04ec0-f6b6-30a6-8970-19a51968532e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.239,
- "errQualifier": "sd",
- "errorValue": 0.015
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.257,
- "errQualifier": "sd",
- "errorValue": 0.019
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 539.73,
- "errQualifier": "sd",
- "errorValue": 0.93
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-11164ee9-05f6-3772-9352-aa6467832648.json b/test/data/enm/study-FCSV-11164ee9-05f6-3772-9352-aa6467832648.json
deleted file mode 100644
index 80f7a10..0000000
--- a/test/data/enm/study-FCSV-11164ee9-05f6-3772-9352-aa6467832648.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-11164ee9-05f6-3772-9352-aa6467832648",
- "owner": {
- "substance": {
- "uuid": "FCSV-acbbde2e-0238-3d4c-a2f4-7629ad478e6a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-11212ddb-f743-3c93-b82e-10d6521e3d3d.json b/test/data/enm/study-FCSV-11212ddb-f743-3c93-b82e-10d6521e3d3d.json
deleted file mode 100644
index d29717a..0000000
--- a/test/data/enm/study-FCSV-11212ddb-f743-3c93-b82e-10d6521e3d3d.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-11212ddb-f743-3c93-b82e-10d6521e3d3d",
- "owner": {
- "substance": {
- "uuid": "FCSV-2a853f39-424f-3a63-91f3-1300f85ebe73"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 23.15,
- "errQualifier": "sd",
- "errorValue": 0.87
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 47.03,
- "errQualifier": "sd",
- "errorValue": 2.72
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 22.84,
- "errQualifier": "sd",
- "errorValue": 1.25
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 175.14,
- "errQualifier": "sd",
- "errorValue": 174.52
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 27.78,
- "errQualifier": "sd",
- "errorValue": 1.18
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23.34,
- "errQualifier": "sd",
- "errorValue": 2.55
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 27.78,
- "errQualifier": "sd",
- "errorValue": 5.42
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 140.15,
- "errQualifier": "sd",
- "errorValue": 85.05
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-116a8aac-4a3b-3a4d-bb75-7fbc7c557fdc.json b/test/data/enm/study-FCSV-116a8aac-4a3b-3a4d-bb75-7fbc7c557fdc.json
deleted file mode 100644
index ab980c5..0000000
--- a/test/data/enm/study-FCSV-116a8aac-4a3b-3a4d-bb75-7fbc7c557fdc.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-116a8aac-4a3b-3a4d-bb75-7fbc7c557fdc",
- "owner": {
- "substance": {
- "uuid": "FCSV-9b1b9ad6-e41d-3ddd-8bea-561af1fc27aa"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-120498bc-f0d0-3c2a-a63b-118f8f8d17e2.json b/test/data/enm/study-FCSV-120498bc-f0d0-3c2a-a63b-118f8f8d17e2.json
deleted file mode 100644
index fdd487a5..0000000
--- a/test/data/enm/study-FCSV-120498bc-f0d0-3c2a-a63b-118f8f8d17e2.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-120498bc-f0d0-3c2a-a63b-118f8f8d17e2",
- "owner": {
- "substance": {
- "uuid": "FCSV-bfa499a9-7d1a-34da-bccf-4fc30c65f03d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-120d2c29-406a-3527-9a34-162958138584.json b/test/data/enm/study-FCSV-120d2c29-406a-3527-9a34-162958138584.json
deleted file mode 100644
index e56c511..0000000
--- a/test/data/enm/study-FCSV-120d2c29-406a-3527-9a34-162958138584.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-120d2c29-406a-3527-9a34-162958138584",
- "owner": {
- "substance": {
- "uuid": "FCSV-4dd1bf89-e885-3128-abe2-9a87fbbd0242"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
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- },
- "effects": [
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- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 59.3,
- "errQualifier": "sd",
- "errorValue": 6.4
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1224cf68-5413-3fb9-89b2-b8f336a0c650.json b/test/data/enm/study-FCSV-1224cf68-5413-3fb9-89b2-b8f336a0c650.json
deleted file mode 100644
index d6f52e4..0000000
--- a/test/data/enm/study-FCSV-1224cf68-5413-3fb9-89b2-b8f336a0c650.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-1224cf68-5413-3fb9-89b2-b8f336a0c650",
- "owner": {
- "substance": {
- "uuid": "FCSV-cd7105f2-f630-360e-b8dc-ff42b18bb421"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.526,
- "errQualifier": "sd",
- "errorValue": 0.362
- }
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- ]
-}
diff --git a/test/data/enm/study-FCSV-12bcba46-c960-35c4-b840-a8b7c04bd42b.json b/test/data/enm/study-FCSV-12bcba46-c960-35c4-b840-a8b7c04bd42b.json
deleted file mode 100644
index caee25e..0000000
--- a/test/data/enm/study-FCSV-12bcba46-c960-35c4-b840-a8b7c04bd42b.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-12bcba46-c960-35c4-b840-a8b7c04bd42b",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
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- },
- "interpretation": {
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- "effects": [
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- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 2.107,
- "errQualifier": "sd",
- "errorValue": 0.168
- }
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diff --git a/test/data/enm/study-FCSV-12cdb95c-0701-3be5-9b6f-8e9bf56dd790.json b/test/data/enm/study-FCSV-12cdb95c-0701-3be5-9b6f-8e9bf56dd790.json
deleted file mode 100644
index a9cf382..0000000
--- a/test/data/enm/study-FCSV-12cdb95c-0701-3be5-9b6f-8e9bf56dd790.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-12cdb95c-0701-3be5-9b6f-8e9bf56dd790",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
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- "interpretation": {
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- },
- "effects": [
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- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -0.6,
- "errQualifier": "sd",
- "errorValue": 0.32
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": -0.61,
- "errQualifier": "sd",
- "errorValue": 2.07
- }
- }
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diff --git a/test/data/enm/study-FCSV-12dc84ee-487f-3046-99fc-1d96772443b6.json b/test/data/enm/study-FCSV-12dc84ee-487f-3046-99fc-1d96772443b6.json
deleted file mode 100644
index 936f305..0000000
--- a/test/data/enm/study-FCSV-12dc84ee-487f-3046-99fc-1d96772443b6.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-12dc84ee-487f-3046-99fc-1d96772443b6",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
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- "reliability": {
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- "effects": [
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- },
- "result": {
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- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
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- },
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- "loQualifier": "mean",
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- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
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- "result": {
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- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
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- "MEDIUM": "Human serum (Sigma #H4522)",
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- "result": {
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- "loValue": 41.45,
- "errQualifier": "sd",
- "errorValue": 2.27
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 34.94,
- "errQualifier": "sd",
- "errorValue": 1.11
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 38.49,
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- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
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- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 34.94,
- "errQualifier": "sd",
- "errorValue": 19.11
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 46.88,
- "errQualifier": "sd",
- "errorValue": 2.23
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-130b1a65-fcd4-342c-b773-04e3683d01b1.json b/test/data/enm/study-FCSV-130b1a65-fcd4-342c-b773-04e3683d01b1.json
deleted file mode 100644
index 6c619c4..0000000
--- a/test/data/enm/study-FCSV-130b1a65-fcd4-342c-b773-04e3683d01b1.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-130b1a65-fcd4-342c-b773-04e3683d01b1",
- "owner": {
- "substance": {
- "uuid": "FCSV-a7f3867d-85fc-33ab-8167-66b73c818f31"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 1.909,
- "errQualifier": "sd",
- "errorValue": 0.313
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-130f5f5c-ef30-3af3-8603-f33b7f1df85e.json b/test/data/enm/study-FCSV-130f5f5c-ef30-3af3-8603-f33b7f1df85e.json
deleted file mode 100644
index 3f3f86f..0000000
--- a/test/data/enm/study-FCSV-130f5f5c-ef30-3af3-8603-f33b7f1df85e.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-130f5f5c-ef30-3af3-8603-f33b7f1df85e",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
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- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
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- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Log2 transformed",
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- "Cell": "A549"
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- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -7.599,
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diff --git a/test/data/enm/study-FCSV-1336b809-d516-3fd2-8d57-b77762cb2667.json b/test/data/enm/study-FCSV-1336b809-d516-3fd2-8d57-b77762cb2667.json
deleted file mode 100644
index 41c3967..0000000
--- a/test/data/enm/study-FCSV-1336b809-d516-3fd2-8d57-b77762cb2667.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-1336b809-d516-3fd2-8d57-b77762cb2667",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
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- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
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- "effects": [
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diff --git a/test/data/enm/study-FCSV-13572856-5967-3cf0-91a5-5af5e5b841f5.json b/test/data/enm/study-FCSV-13572856-5967-3cf0-91a5-5af5e5b841f5.json
deleted file mode 100644
index 6c0459f..0000000
--- a/test/data/enm/study-FCSV-13572856-5967-3cf0-91a5-5af5e5b841f5.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-13572856-5967-3cf0-91a5-5af5e5b841f5",
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- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
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- "endpoint": "Solution-based digestion protocol for serum protein isolates",
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- "doi: 10.1021/nn406018q"
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- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
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- "effects": [
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- "endpoint": "Spectral counts",
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-138df243-dfd0-3bca-873c-14c9ebd8698f.json b/test/data/enm/study-FCSV-138df243-dfd0-3bca-873c-14c9ebd8698f.json
deleted file mode 100644
index a1900d7..0000000
--- a/test/data/enm/study-FCSV-138df243-dfd0-3bca-873c-14c9ebd8698f.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-138df243-dfd0-3bca-873c-14c9ebd8698f",
- "owner": {
- "substance": {
- "uuid": "FCSV-6405ef25-683e-3763-a4e3-f56eb93174e4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.299,
- "errQualifier": "sd",
- "errorValue": 0.005
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.314,
- "errQualifier": "sd",
- "errorValue": 0.002
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 527.1,
- "errQualifier": "sd",
- "errorValue": 0.56
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1395ec38-a087-3aa0-b1e1-9590eb2f15d2.json b/test/data/enm/study-FCSV-1395ec38-a087-3aa0-b1e1-9590eb2f15d2.json
deleted file mode 100644
index e329ba4..0000000
--- a/test/data/enm/study-FCSV-1395ec38-a087-3aa0-b1e1-9590eb2f15d2.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-1395ec38-a087-3aa0-b1e1-9590eb2f15d2",
- "owner": {
- "substance": {
- "uuid": "FCSV-edc7f198-f391-328e-aa68-7d3f00b62af5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -24.38,
- "errQualifier": "sd",
- "errorValue": 6.15
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -8.92,
- "errQualifier": "sd",
- "errorValue": 1.24
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-13ca7269-bc5a-37c7-9d4e-7cddcb450248.json b/test/data/enm/study-FCSV-13ca7269-bc5a-37c7-9d4e-7cddcb450248.json
deleted file mode 100644
index e3ebce0..0000000
--- a/test/data/enm/study-FCSV-13ca7269-bc5a-37c7-9d4e-7cddcb450248.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-13ca7269-bc5a-37c7-9d4e-7cddcb450248",
- "owner": {
- "substance": {
- "uuid": "FCSV-edc7f198-f391-328e-aa68-7d3f00b62af5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.278,
- "errQualifier": "sd",
- "errorValue": 0.047
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.389,
- "errQualifier": "sd",
- "errorValue": 0.009
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 521.17,
- "errQualifier": "sd",
- "errorValue": 0.87
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-13e3e3e0-d473-35bd-8931-40bc8054d16c.json b/test/data/enm/study-FCSV-13e3e3e0-d473-35bd-8931-40bc8054d16c.json
deleted file mode 100644
index eb7b1f3..0000000
--- a/test/data/enm/study-FCSV-13e3e3e0-d473-35bd-8931-40bc8054d16c.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-13e3e3e0-d473-35bd-8931-40bc8054d16c",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc77c03d-4e75-3fab-bb3d-17b983663819"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.183,
- "errQualifier": "sd",
- "errorValue": 0.076
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.454,
- "errQualifier": "sd",
- "errorValue": 0.03
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 518.77,
- "errQualifier": "sd",
- "errorValue": 0.51
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-13ffa8f1-8b2d-3811-83bd-7341bac6df62.json b/test/data/enm/study-FCSV-13ffa8f1-8b2d-3811-83bd-7341bac6df62.json
deleted file mode 100644
index 095fd60..0000000
--- a/test/data/enm/study-FCSV-13ffa8f1-8b2d-3811-83bd-7341bac6df62.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-13ffa8f1-8b2d-3811-83bd-7341bac6df62",
- "owner": {
- "substance": {
- "uuid": "FCSV-3adf8c83-83b1-3ffa-8868-b8527d83923b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.387,
- "errQualifier": "sd",
- "errorValue": 0.041
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.203,
- "errQualifier": "sd",
- "errorValue": 0.026
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-13ffd3e7-8e98-3a6f-9560-8ded9f7d7cd2.json b/test/data/enm/study-FCSV-13ffd3e7-8e98-3a6f-9560-8ded9f7d7cd2.json
deleted file mode 100644
index 2ec5894..0000000
--- a/test/data/enm/study-FCSV-13ffd3e7-8e98-3a6f-9560-8ded9f7d7cd2.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-13ffd3e7-8e98-3a6f-9560-8ded9f7d7cd2",
- "owner": {
- "substance": {
- "uuid": "FCSV-0d5c0fc7-de56-3507-b651-1c91bf030465"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 3.724,
- "errQualifier": "sd",
- "errorValue": 0.465
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1437521a-4c31-3fbc-8320-bb11223b3877.json b/test/data/enm/study-FCSV-1437521a-4c31-3fbc-8320-bb11223b3877.json
deleted file mode 100644
index 2c86ac0..0000000
--- a/test/data/enm/study-FCSV-1437521a-4c31-3fbc-8320-bb11223b3877.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-1437521a-4c31-3fbc-8320-bb11223b3877",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f5e6fcb-23b9-3222-aa6e-4afcbba47715"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Ag]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1467ff02-f126-36a9-8cac-1cce269ffec6.json b/test/data/enm/study-FCSV-1467ff02-f126-36a9-8cac-1cce269ffec6.json
deleted file mode 100644
index 5c10ac6..0000000
--- a/test/data/enm/study-FCSV-1467ff02-f126-36a9-8cac-1cce269ffec6.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-1467ff02-f126-36a9-8cac-1cce269ffec6",
- "owner": {
- "substance": {
- "uuid": "FCSV-8a45dec8-a551-33cc-a7ac-7750d9f30389"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.095,
- "errQualifier": "sd",
- "errorValue": 0.012
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.104,
- "errQualifier": "sd",
- "errorValue": 0.014
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-146e13fb-2fb6-33ff-88fc-688a8fa67bc1.json b/test/data/enm/study-FCSV-146e13fb-2fb6-33ff-88fc-688a8fa67bc1.json
deleted file mode 100644
index 84e2390..0000000
--- a/test/data/enm/study-FCSV-146e13fb-2fb6-33ff-88fc-688a8fa67bc1.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-146e13fb-2fb6-33ff-88fc-688a8fa67bc1",
- "owner": {
- "substance": {
- "uuid": "FCSV-ceed5aa6-a62e-3202-9bcf-702a94d34785"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-148ac9e1-6cdb-38e9-930e-2e29213cb447.json b/test/data/enm/study-FCSV-148ac9e1-6cdb-38e9-930e-2e29213cb447.json
deleted file mode 100644
index 15c4660..0000000
--- a/test/data/enm/study-FCSV-148ac9e1-6cdb-38e9-930e-2e29213cb447.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-148ac9e1-6cdb-38e9-930e-2e29213cb447",
- "owner": {
- "substance": {
- "uuid": "FCSV-2de5071e-596b-3507-84fc-f9ba470cbcbf"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-148d13fb-53d7-3da9-9d01-23aff8a9f457.json b/test/data/enm/study-FCSV-148d13fb-53d7-3da9-9d01-23aff8a9f457.json
deleted file mode 100644
index abc9965..0000000
--- a/test/data/enm/study-FCSV-148d13fb-53d7-3da9-9d01-23aff8a9f457.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-148d13fb-53d7-3da9-9d01-23aff8a9f457",
- "owner": {
- "substance": {
- "uuid": "FCSV-064f1803-3b9e-3f44-a5f6-60b1f573830c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
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- "PHRASEOTHER_PERCENTILE": null,
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- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
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- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
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- "loValue": 0.0
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diff --git a/test/data/enm/study-FCSV-150c15f1-0968-37d7-a389-5ef5052edfb1.json b/test/data/enm/study-FCSV-150c15f1-0968-37d7-a389-5ef5052edfb1.json
deleted file mode 100644
index 4a2d703..0000000
--- a/test/data/enm/study-FCSV-150c15f1-0968-37d7-a389-5ef5052edfb1.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-150c15f1-0968-37d7-a389-5ef5052edfb1",
- "owner": {
- "substance": {
- "uuid": "FCSV-99734121-3347-3d4e-9bc6-67956450b140"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
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- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
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- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -10.9,
- "errQualifier": "sd",
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-151757f1-9270-3757-a224-2a2469f1478a.json b/test/data/enm/study-FCSV-151757f1-9270-3757-a224-2a2469f1478a.json
deleted file mode 100644
index 69a545f..0000000
--- a/test/data/enm/study-FCSV-151757f1-9270-3757-a224-2a2469f1478a.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-151757f1-9270-3757-a224-2a2469f1478a",
- "owner": {
- "substance": {
- "uuid": "FCSV-5b29295c-f2ab-3e5a-bb32-37caac38b002"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-153bdca6-e55e-3da8-a28d-0c9d3ec85dc8.json b/test/data/enm/study-FCSV-153bdca6-e55e-3da8-a28d-0c9d3ec85dc8.json
deleted file mode 100644
index 78bf2be..0000000
--- a/test/data/enm/study-FCSV-153bdca6-e55e-3da8-a28d-0c9d3ec85dc8.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-153bdca6-e55e-3da8-a28d-0c9d3ec85dc8",
- "owner": {
- "substance": {
- "uuid": "FCSV-5b29295c-f2ab-3e5a-bb32-37caac38b002"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Thiolated L-asparagine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1579475a-3b74-3d5a-8a56-4bab4b59498d.json b/test/data/enm/study-FCSV-1579475a-3b74-3d5a-8a56-4bab4b59498d.json
deleted file mode 100644
index 4080b25..0000000
--- a/test/data/enm/study-FCSV-1579475a-3b74-3d5a-8a56-4bab4b59498d.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-1579475a-3b74-3d5a-8a56-4bab4b59498d",
- "owner": {
- "substance": {
- "uuid": "FCSV-ed95bb69-9fa7-3a4a-b4a4-32dd947d4d1a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
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- },
- "reliability": {
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- "effects": [
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- "conditions": {
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- "result": {
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- "loQualifier": "mean",
- "loValue": 0.156,
- "errQualifier": "sd",
- "errorValue": 0.098
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- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 0.173,
- "errQualifier": "sd",
- "errorValue": 0.006
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-15c0af9b-d9c7-3a94-b0eb-984ac41ee39d.json b/test/data/enm/study-FCSV-15c0af9b-d9c7-3a94-b0eb-984ac41ee39d.json
deleted file mode 100644
index 616ed2d..0000000
--- a/test/data/enm/study-FCSV-15c0af9b-d9c7-3a94-b0eb-984ac41ee39d.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-15c0af9b-d9c7-3a94-b0eb-984ac41ee39d",
- "owner": {
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- "uuid": "FCSV-4c523ea9-f3e8-32f4-9152-f73400aedb67"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
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- },
- "effects": [
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- "Remark": null,
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- },
- "result": {
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- "errQualifier": "sd",
- "errorValue": 1.96
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
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- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 46.53,
- "errQualifier": "sd",
- "errorValue": 1.59
- }
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- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
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- "Remark": null,
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- },
- "result": {
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- "loValue": 26.45,
- "errQualifier": "sd",
- "errorValue": 10.05
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- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
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- "Remark": null,
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- },
- "result": {
- "unit": "nm",
- "loValue": 126.27,
- "errQualifier": "sd",
- "errorValue": 136.44
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- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
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- "errQualifier": "sd",
- "errorValue": 3.42
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 27.76,
- "errQualifier": "sd",
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- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
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- "result": {
- "unit": "nm",
- "loValue": 34.7,
- "errQualifier": "sd",
- "errorValue": 19.91
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 67.36,
- "errQualifier": "sd",
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-15d3809c-2cc2-3dae-8238-7f9d040a7935.json b/test/data/enm/study-FCSV-15d3809c-2cc2-3dae-8238-7f9d040a7935.json
deleted file mode 100644
index 5bb6ed2..0000000
--- a/test/data/enm/study-FCSV-15d3809c-2cc2-3dae-8238-7f9d040a7935.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-15d3809c-2cc2-3dae-8238-7f9d040a7935",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
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- "effects": [
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- "conditions": {
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- "Remark": null,
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- },
- "result": {
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- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
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- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
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- },
- "result": {
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- "loValue": 100.49,
- "errQualifier": "sd",
- "errorValue": 4.2
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 392.16,
- "errQualifier": "sd",
- "errorValue": 484.34
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loValue": 103.75,
- "errQualifier": "sd",
- "errorValue": 2.1
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 91.72,
- "errQualifier": "sd",
- "errorValue": 5.42
- }
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- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 103.75,
- "errQualifier": "sd",
- "errorValue": 4.38
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 109.48,
- "errQualifier": "sd",
- "errorValue": 11.54
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1660165b-4702-3dac-92c4-9808e2962f34.json b/test/data/enm/study-FCSV-1660165b-4702-3dac-92c4-9808e2962f34.json
deleted file mode 100644
index 191c9bc..0000000
--- a/test/data/enm/study-FCSV-1660165b-4702-3dac-92c4-9808e2962f34.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-1660165b-4702-3dac-92c4-9808e2962f34",
- "owner": {
- "substance": {
- "uuid": "FCSV-de7a4a31-ee94-313e-bfc4-acc11f0b56ec"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
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- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- "effects": [
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- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
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- "textValue": "alpha-Lipoic acid"
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-}
diff --git a/test/data/enm/study-FCSV-167e5d4d-a82b-3308-9e27-b439cbef8835.json b/test/data/enm/study-FCSV-167e5d4d-a82b-3308-9e27-b439cbef8835.json
deleted file mode 100644
index deab43d..0000000
--- a/test/data/enm/study-FCSV-167e5d4d-a82b-3308-9e27-b439cbef8835.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-167e5d4d-a82b-3308-9e27-b439cbef8835",
- "owner": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
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- },
- "result": {
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- {
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- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
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- },
- "result": {
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- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
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- "errQualifier": "sd",
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- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
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- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
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- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
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- "errQualifier": "sd",
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- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
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- },
- "result": {
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- "loValue": 45.11,
- "errQualifier": "sd",
- "errorValue": 1.21
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- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
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- },
- "result": {
- "unit": "nm",
- "loValue": 76.17,
- "errQualifier": "sd",
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- }
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diff --git a/test/data/enm/study-FCSV-169824a1-7280-3868-acde-0ee9c6759ec8.json b/test/data/enm/study-FCSV-169824a1-7280-3868-acde-0ee9c6759ec8.json
deleted file mode 100644
index d03c126..0000000
--- a/test/data/enm/study-FCSV-169824a1-7280-3868-acde-0ee9c6759ec8.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-169824a1-7280-3868-acde-0ee9c6759ec8",
- "owner": {
- "substance": {
- "uuid": "FCSV-ae94c9b5-ffeb-3b3b-8464-1dfe3dbde073"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
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- "doi: 10.1021/nn406018q"
- ]
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- "parameters": {
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- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.138,
- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 0.217,
- "errQualifier": "sd",
- "errorValue": 0.007
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-169dcf2a-849b-3f46-a3d8-4642b48e6531.json b/test/data/enm/study-FCSV-169dcf2a-849b-3f46-a3d8-4642b48e6531.json
deleted file mode 100644
index 2c776e6..0000000
--- a/test/data/enm/study-FCSV-169dcf2a-849b-3f46-a3d8-4642b48e6531.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-169dcf2a-849b-3f46-a3d8-4642b48e6531",
- "owner": {
- "substance": {
- "uuid": "FCSV-1180669a-fc30-3bc1-b53e-6a200c4248e4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.227,
- "errQualifier": "sd",
- "errorValue": 0.07
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.278,
- "errQualifier": "sd",
- "errorValue": 0.008
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 520.43,
- "errQualifier": "sd",
- "errorValue": 0.15
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-16d66d7a-493a-3284-8f30-fa70882b2352.json b/test/data/enm/study-FCSV-16d66d7a-493a-3284-8f30-fa70882b2352.json
deleted file mode 100644
index 8b072de..0000000
--- a/test/data/enm/study-FCSV-16d66d7a-493a-3284-8f30-fa70882b2352.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-16d66d7a-493a-3284-8f30-fa70882b2352",
- "owner": {
- "substance": {
- "uuid": "FCSV-05f4c488-5326-3d8a-be41-c57c468b2fa4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.245,
- "errQualifier": "sd",
- "errorValue": 0.018
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.288,
- "errQualifier": "sd",
- "errorValue": 0.087
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 542.1,
- "errQualifier": "sd",
- "errorValue": 1.42
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-16da542b-45e9-31a1-bff3-cb8125e29bba.json b/test/data/enm/study-FCSV-16da542b-45e9-31a1-bff3-cb8125e29bba.json
deleted file mode 100644
index 288839a..0000000
--- a/test/data/enm/study-FCSV-16da542b-45e9-31a1-bff3-cb8125e29bba.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-16da542b-45e9-31a1-bff3-cb8125e29bba",
- "owner": {
- "substance": {
- "uuid": "FCSV-ef28f16c-6ab1-3d8b-b971-37c08688701f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1701c31c-eb5e-39aa-bd4b-f9e119c9b53e.json b/test/data/enm/study-FCSV-1701c31c-eb5e-39aa-bd4b-f9e119c9b53e.json
deleted file mode 100644
index c33269c..0000000
--- a/test/data/enm/study-FCSV-1701c31c-eb5e-39aa-bd4b-f9e119c9b53e.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-1701c31c-eb5e-39aa-bd4b-f9e119c9b53e",
- "owner": {
- "substance": {
- "uuid": "FCSV-cb2f11a0-4af8-318b-8a60-3908f45c2e65"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-171774bb-5f86-377a-bea9-1b204a3d3ed7.json b/test/data/enm/study-FCSV-171774bb-5f86-377a-bea9-1b204a3d3ed7.json
deleted file mode 100644
index 976ade2..0000000
--- a/test/data/enm/study-FCSV-171774bb-5f86-377a-bea9-1b204a3d3ed7.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-171774bb-5f86-377a-bea9-1b204a3d3ed7",
- "owner": {
- "substance": {
- "uuid": "FCSV-c4fe20ba-de05-36c2-9842-5433ce33bd72"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": 11.21,
- "errQualifier": "sd",
- "errorValue": 6.16
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -7.73,
- "errQualifier": "sd",
- "errorValue": 1.56
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-172f6ec5-2e1f-34a3-be87-ee6292219cfc.json b/test/data/enm/study-FCSV-172f6ec5-2e1f-34a3-be87-ee6292219cfc.json
deleted file mode 100644
index 34671b4..0000000
--- a/test/data/enm/study-FCSV-172f6ec5-2e1f-34a3-be87-ee6292219cfc.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-172f6ec5-2e1f-34a3-be87-ee6292219cfc",
- "owner": {
- "substance": {
- "uuid": "FCSV-05f4c488-5326-3d8a-be41-c57c468b2fa4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1755a2f7-a5c0-376a-aa1d-a32dd0065631.json b/test/data/enm/study-FCSV-1755a2f7-a5c0-376a-aa1d-a32dd0065631.json
deleted file mode 100644
index 3c55859..0000000
--- a/test/data/enm/study-FCSV-1755a2f7-a5c0-376a-aa1d-a32dd0065631.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-1755a2f7-a5c0-376a-aa1d-a32dd0065631",
- "owner": {
- "substance": {
- "uuid": "FCSV-d6c56b3e-71a2-330b-92b6-9c90e6046eaa"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 484.133,
- "errQualifier": "sd",
- "errorValue": 77.214
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 2
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.033
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-17c29c10-65bd-35af-9ee0-03b9144be455.json b/test/data/enm/study-FCSV-17c29c10-65bd-35af-9ee0-03b9144be455.json
deleted file mode 100644
index 7eeb440..0000000
--- a/test/data/enm/study-FCSV-17c29c10-65bd-35af-9ee0-03b9144be455.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-17c29c10-65bd-35af-9ee0-03b9144be455",
- "owner": {
- "substance": {
- "uuid": "FCSV-d677545a-5079-3793-8990-4061a6b254c5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1814e758-0073-36e8-a18e-af308f1d178d.json b/test/data/enm/study-FCSV-1814e758-0073-36e8-a18e-af308f1d178d.json
deleted file mode 100644
index 051ed25..0000000
--- a/test/data/enm/study-FCSV-1814e758-0073-36e8-a18e-af308f1d178d.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-1814e758-0073-36e8-a18e-af308f1d178d",
- "owner": {
- "substance": {
- "uuid": "FCSV-6b272721-ed04-31bd-a4d4-cb6496140e85"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-18606315-8e61-3976-b801-7805429d99ad.json b/test/data/enm/study-FCSV-18606315-8e61-3976-b801-7805429d99ad.json
deleted file mode 100644
index 4b64b9b..0000000
--- a/test/data/enm/study-FCSV-18606315-8e61-3976-b801-7805429d99ad.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-18606315-8e61-3976-b801-7805429d99ad",
- "owner": {
- "substance": {
- "uuid": "FCSV-924a51b9-97d3-31fb-b289-52688d9d0d3c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 260.336,
- "errQualifier": "sd",
- "errorValue": 4.165
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 1,
- "errQualifier": "sem",
- "errorValue": 0.036
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-18723cc2-a174-3136-9924-a837ebf50229.json b/test/data/enm/study-FCSV-18723cc2-a174-3136-9924-a837ebf50229.json
deleted file mode 100644
index c318adf..0000000
--- a/test/data/enm/study-FCSV-18723cc2-a174-3136-9924-a837ebf50229.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-18723cc2-a174-3136-9924-a837ebf50229",
- "owner": {
- "substance": {
- "uuid": "FCSV-bdd4c371-ffec-34f1-ae5b-2c60d243e867"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
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- },
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.007,
- "errQualifier": "sd",
- "errorValue": 0.005
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -7.181,
- "errQualifier": "std",
- "errorValue": 1.011
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1920c084-5487-3bef-9fca-2f1fc2402374.json b/test/data/enm/study-FCSV-1920c084-5487-3bef-9fca-2f1fc2402374.json
deleted file mode 100644
index 6f44195..0000000
--- a/test/data/enm/study-FCSV-1920c084-5487-3bef-9fca-2f1fc2402374.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-1920c084-5487-3bef-9fca-2f1fc2402374",
- "owner": {
- "substance": {
- "uuid": "FCSV-064f1803-3b9e-3f44-a5f6-60b1f573830c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
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- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-193b8b8d-307a-3d4c-a390-65a2d895ff83.json b/test/data/enm/study-FCSV-193b8b8d-307a-3d4c-a390-65a2d895ff83.json
deleted file mode 100644
index d5dabf0..0000000
--- a/test/data/enm/study-FCSV-193b8b8d-307a-3d4c-a390-65a2d895ff83.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-193b8b8d-307a-3d4c-a390-65a2d895ff83",
- "owner": {
- "substance": {
- "uuid": "FCSV-acbbde2e-0238-3d4c-a2f4-7629ad478e6a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
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- "ELEMENT_OR_GROUP": null,
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- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-196f2ee1-b3fe-3697-8af4-2e7c1c06cf4a.json b/test/data/enm/study-FCSV-196f2ee1-b3fe-3697-8af4-2e7c1c06cf4a.json
deleted file mode 100644
index 6e89637..0000000
--- a/test/data/enm/study-FCSV-196f2ee1-b3fe-3697-8af4-2e7c1c06cf4a.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-196f2ee1-b3fe-3697-8af4-2e7c1c06cf4a",
- "owner": {
- "substance": {
- "uuid": "FCSV-ff7d2c8c-3d2f-316a-b890-6f9e7d88df4c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.001,
- "errQualifier": "sd",
- "errorValue": 0.002
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -9.583,
- "errQualifier": "std",
- "errorValue": 2.04
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-19717d89-6782-36f4-81c0-f8ca70a25a95.json b/test/data/enm/study-FCSV-19717d89-6782-36f4-81c0-f8ca70a25a95.json
deleted file mode 100644
index b4633ff..0000000
--- a/test/data/enm/study-FCSV-19717d89-6782-36f4-81c0-f8ca70a25a95.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-19717d89-6782-36f4-81c0-f8ca70a25a95",
- "owner": {
- "substance": {
- "uuid": "FCSV-2ed7ebf8-d11d-3f39-8f05-b0132ec4d7e0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-19a186f9-da91-30cd-a3db-e42c83a47f26.json b/test/data/enm/study-FCSV-19a186f9-da91-30cd-a3db-e42c83a47f26.json
deleted file mode 100644
index 8b2d5e2..0000000
--- a/test/data/enm/study-FCSV-19a186f9-da91-30cd-a3db-e42c83a47f26.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-19a186f9-da91-30cd-a3db-e42c83a47f26",
- "owner": {
- "substance": {
- "uuid": "FCSV-e4b9ce55-bbeb-368b-a1d4-e591b7df742e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-19a4aaed-5550-338c-9a16-52bb29fb2aa2.json b/test/data/enm/study-FCSV-19a4aaed-5550-338c-9a16-52bb29fb2aa2.json
deleted file mode 100644
index 2ad4cb1..0000000
--- a/test/data/enm/study-FCSV-19a4aaed-5550-338c-9a16-52bb29fb2aa2.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-19a4aaed-5550-338c-9a16-52bb29fb2aa2",
- "owner": {
- "substance": {
- "uuid": "FCSV-b38f2b71-aa2d-3d72-af88-166a60bedee2"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "conditions": {
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
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- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-19b438d2-d827-3eda-b4f6-9f6ef8b0dea1.json b/test/data/enm/study-FCSV-19b438d2-d827-3eda-b4f6-9f6ef8b0dea1.json
deleted file mode 100644
index b5d752a..0000000
--- a/test/data/enm/study-FCSV-19b438d2-d827-3eda-b4f6-9f6ef8b0dea1.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-19b438d2-d827-3eda-b4f6-9f6ef8b0dea1",
- "owner": {
- "substance": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 38.4,
- "errQualifier": "sd",
- "errorValue": 2.5
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 10.5
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 108
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-1a4dd8d4-9ebf-3ecf-a172-21c33aedb57d.json b/test/data/enm/study-FCSV-1a4dd8d4-9ebf-3ecf-a172-21c33aedb57d.json
deleted file mode 100644
index 36cb6a5..0000000
--- a/test/data/enm/study-FCSV-1a4dd8d4-9ebf-3ecf-a172-21c33aedb57d.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-1a4dd8d4-9ebf-3ecf-a172-21c33aedb57d",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 5.002,
- "errQualifier": "sd",
- "errorValue": 0.588
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1a6881d8-5771-36cf-bfc1-a1f452e85a10.json b/test/data/enm/study-FCSV-1a6881d8-5771-36cf-bfc1-a1f452e85a10.json
deleted file mode 100644
index 3189740..0000000
--- a/test/data/enm/study-FCSV-1a6881d8-5771-36cf-bfc1-a1f452e85a10.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-1a6881d8-5771-36cf-bfc1-a1f452e85a10",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc488cf3-986d-34cf-9ee7-12f98873dfe4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 1.486,
- "errQualifier": "sd",
- "errorValue": 0.543
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1a9f873f-bf04-35e9-a11d-92eb2e8141b4.json b/test/data/enm/study-FCSV-1a9f873f-bf04-35e9-a11d-92eb2e8141b4.json
deleted file mode 100644
index 63202a1..0000000
--- a/test/data/enm/study-FCSV-1a9f873f-bf04-35e9-a11d-92eb2e8141b4.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-1a9f873f-bf04-35e9-a11d-92eb2e8141b4",
- "owner": {
- "substance": {
- "uuid": "FCSV-9bf04ec0-f6b6-30a6-8970-19a51968532e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 59.3,
- "errQualifier": "sd",
- "errorValue": 6.4
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1ad6a0f7-f0e0-3890-be09-1554eb6736c5.json b/test/data/enm/study-FCSV-1ad6a0f7-f0e0-3890-be09-1554eb6736c5.json
deleted file mode 100644
index e15d24c..0000000
--- a/test/data/enm/study-FCSV-1ad6a0f7-f0e0-3890-be09-1554eb6736c5.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-1ad6a0f7-f0e0-3890-be09-1554eb6736c5",
- "owner": {
- "substance": {
- "uuid": "FCSV-206b1a13-e02a-38a0-88ec-d5a8bfdabc55"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1ae028fc-b6ac-3a68-a182-6713097af302.json b/test/data/enm/study-FCSV-1ae028fc-b6ac-3a68-a182-6713097af302.json
deleted file mode 100644
index 21d4f21..0000000
--- a/test/data/enm/study-FCSV-1ae028fc-b6ac-3a68-a182-6713097af302.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-1ae028fc-b6ac-3a68-a182-6713097af302",
- "owner": {
- "substance": {
- "uuid": "FCSV-50aee86c-a3a2-3c46-86bf-5ac25485fc13"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1b170584-8ded-359d-adea-4f4b8b0c060a.json b/test/data/enm/study-FCSV-1b170584-8ded-359d-adea-4f4b8b0c060a.json
deleted file mode 100644
index fe78f69..0000000
--- a/test/data/enm/study-FCSV-1b170584-8ded-359d-adea-4f4b8b0c060a.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-1b170584-8ded-359d-adea-4f4b8b0c060a",
- "owner": {
- "substance": {
- "uuid": "FCSV-5b29295c-f2ab-3e5a-bb32-37caac38b002"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 3.552,
- "errQualifier": "sd",
- "errorValue": 0.895
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1b8b2728-dbdb-33a8-b74f-b8f3741f2c8b.json b/test/data/enm/study-FCSV-1b8b2728-dbdb-33a8-b74f-b8f3741f2c8b.json
deleted file mode 100644
index 028daff..0000000
--- a/test/data/enm/study-FCSV-1b8b2728-dbdb-33a8-b74f-b8f3741f2c8b.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-1b8b2728-dbdb-33a8-b74f-b8f3741f2c8b",
- "owner": {
- "substance": {
- "uuid": "FCSV-c4fe20ba-de05-36c2-9842-5433ce33bd72"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.829,
- "errQualifier": "sd",
- "errorValue": 0.062
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -0.27,
- "errQualifier": "std",
- "errorValue": 0.108
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1bb7dc00-802b-34d9-afe9-338b1c8dd198.json b/test/data/enm/study-FCSV-1bb7dc00-802b-34d9-afe9-338b1c8dd198.json
deleted file mode 100644
index c29cc15..0000000
--- a/test/data/enm/study-FCSV-1bb7dc00-802b-34d9-afe9-338b1c8dd198.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-1bb7dc00-802b-34d9-afe9-338b1c8dd198",
- "owner": {
- "substance": {
- "uuid": "FCSV-f3d54c07-7dd4-3124-b5bf-341eb9eb4e82"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
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- "testmat_form": null
- },
- "reliability": {
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- "r_studyResultType": "experimental result",
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- "effects": [
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-1bddf7eb-191a-3881-b89e-db70ad9d3bf0.json b/test/data/enm/study-FCSV-1bddf7eb-191a-3881-b89e-db70ad9d3bf0.json
deleted file mode 100644
index 5f5cdcc..0000000
--- a/test/data/enm/study-FCSV-1bddf7eb-191a-3881-b89e-db70ad9d3bf0.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-1bddf7eb-191a-3881-b89e-db70ad9d3bf0",
- "owner": {
- "substance": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- },
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- },
- "effects": [
- {
- "endpoint": "Spectral counts",
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- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1bf73c22-010c-3d73-a7a5-8b3213b9e244.json b/test/data/enm/study-FCSV-1bf73c22-010c-3d73-a7a5-8b3213b9e244.json
deleted file mode 100644
index 82b68de..0000000
--- a/test/data/enm/study-FCSV-1bf73c22-010c-3d73-a7a5-8b3213b9e244.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-1bf73c22-010c-3d73-a7a5-8b3213b9e244",
- "owner": {
- "substance": {
- "uuid": "FCSV-5c14595c-0e23-3f37-aaad-9988eba09196"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 22.36,
- "errQualifier": "sd",
- "errorValue": 0.46
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 42.05,
- "errQualifier": "sd",
- "errorValue": 1.11
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20.78,
- "errQualifier": "sd",
- "errorValue": 1.63
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 36.9,
- "errQualifier": "sd",
- "errorValue": 10.53
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23.76,
- "errQualifier": "sd",
- "errorValue": 2.07
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 34.01,
- "errQualifier": "sd",
- "errorValue": 11.16
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23.76,
- "errQualifier": "sd",
- "errorValue": 0.48
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 47.03,
- "errQualifier": "sd",
- "errorValue": 1.19
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1c063b53-e4b3-3050-93c0-4c1f37532017.json b/test/data/enm/study-FCSV-1c063b53-e4b3-3050-93c0-4c1f37532017.json
deleted file mode 100644
index 5ed2797..0000000
--- a/test/data/enm/study-FCSV-1c063b53-e4b3-3050-93c0-4c1f37532017.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-1c063b53-e4b3-3050-93c0-4c1f37532017",
- "owner": {
- "substance": {
- "uuid": "FCSV-6d8b8701-7fca-3936-a45e-66c17012fc75"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Hexadecyltrimethylammonium bromide"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1c210757-4174-3e67-b7de-967948600816.json b/test/data/enm/study-FCSV-1c210757-4174-3e67-b7de-967948600816.json
deleted file mode 100644
index 789c7a0..0000000
--- a/test/data/enm/study-FCSV-1c210757-4174-3e67-b7de-967948600816.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-1c210757-4174-3e67-b7de-967948600816",
- "owner": {
- "substance": {
- "uuid": "FCSV-f0cbcba3-1cb5-3fa5-82cc-bfd9d1afa21d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 471.03,
- "errQualifier": "sd",
- "errorValue": 16.789
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.063
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1c3cc46d-d53e-39e8-95da-59cc630d9d66.json b/test/data/enm/study-FCSV-1c3cc46d-d53e-39e8-95da-59cc630d9d66.json
deleted file mode 100644
index 6642ce0..0000000
--- a/test/data/enm/study-FCSV-1c3cc46d-d53e-39e8-95da-59cc630d9d66.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-1c3cc46d-d53e-39e8-95da-59cc630d9d66",
- "owner": {
- "substance": {
- "uuid": "FCSV-1f4a28c8-ecc6-342f-8cbf-1ed579dd34f4"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 38.4,
- "errQualifier": "sd",
- "errorValue": 2.5
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 10.5
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 108
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1c8a05d1-15b9-3d0c-83ef-d0cb432394de.json b/test/data/enm/study-FCSV-1c8a05d1-15b9-3d0c-83ef-d0cb432394de.json
deleted file mode 100644
index 83ab9c5..0000000
--- a/test/data/enm/study-FCSV-1c8a05d1-15b9-3d0c-83ef-d0cb432394de.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-1c8a05d1-15b9-3d0c-83ef-d0cb432394de",
- "owner": {
- "substance": {
- "uuid": "FCSV-9505d90b-f90b-3c94-a6cc-e4ee4c8ec46f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1c8ae5a0-9bf5-3d5a-937b-82db35709d7b.json b/test/data/enm/study-FCSV-1c8ae5a0-9bf5-3d5a-937b-82db35709d7b.json
deleted file mode 100644
index ba3f61f..0000000
--- a/test/data/enm/study-FCSV-1c8ae5a0-9bf5-3d5a-937b-82db35709d7b.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-1c8ae5a0-9bf5-3d5a-937b-82db35709d7b",
- "owner": {
- "substance": {
- "uuid": "FCSV-0d5c0fc7-de56-3507-b651-1c91bf030465"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Thiolated L-serine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1c9486e4-b475-3f02-a7bf-00f82a77f2e1.json b/test/data/enm/study-FCSV-1c9486e4-b475-3f02-a7bf-00f82a77f2e1.json
deleted file mode 100644
index 65c1c43..0000000
--- a/test/data/enm/study-FCSV-1c9486e4-b475-3f02-a7bf-00f82a77f2e1.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-1c9486e4-b475-3f02-a7bf-00f82a77f2e1",
- "owner": {
- "substance": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -20.96,
- "errQualifier": "sd",
- "errorValue": 5.41
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -8.71,
- "errQualifier": "sd",
- "errorValue": 0.93
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1cc9d7ef-445f-3a59-beab-ea9f42299a42.json b/test/data/enm/study-FCSV-1cc9d7ef-445f-3a59-beab-ea9f42299a42.json
deleted file mode 100644
index 71a0545..0000000
--- a/test/data/enm/study-FCSV-1cc9d7ef-445f-3a59-beab-ea9f42299a42.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-1cc9d7ef-445f-3a59-beab-ea9f42299a42",
- "owner": {
- "substance": {
- "uuid": "FCSV-6405ef25-683e-3763-a4e3-f56eb93174e4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.013,
- "errQualifier": "sd",
- "errorValue": 0.004
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -6.223,
- "errQualifier": "std",
- "errorValue": 0.401
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1cd7fcc4-dec1-36e3-b78d-e0f62d328081.json b/test/data/enm/study-FCSV-1cd7fcc4-dec1-36e3-b78d-e0f62d328081.json
deleted file mode 100644
index 215dbb0..0000000
--- a/test/data/enm/study-FCSV-1cd7fcc4-dec1-36e3-b78d-e0f62d328081.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-1cd7fcc4-dec1-36e3-b78d-e0f62d328081",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc77c03d-4e75-3fab-bb3d-17b983663819"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1ceadd7c-e301-3529-9130-7a4b9df74aed.json b/test/data/enm/study-FCSV-1ceadd7c-e301-3529-9130-7a4b9df74aed.json
deleted file mode 100644
index ff8db8c..0000000
--- a/test/data/enm/study-FCSV-1ceadd7c-e301-3529-9130-7a4b9df74aed.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-1ceadd7c-e301-3529-9130-7a4b9df74aed",
- "owner": {
- "substance": {
- "uuid": "FCSV-62d68a47-f27e-3d76-a7cf-5cacae221ec7"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Ag]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1d233288-dc06-3c40-9b33-7b915935eb8e.json b/test/data/enm/study-FCSV-1d233288-dc06-3c40-9b33-7b915935eb8e.json
deleted file mode 100644
index b79bf3e..0000000
--- a/test/data/enm/study-FCSV-1d233288-dc06-3c40-9b33-7b915935eb8e.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-1d233288-dc06-3c40-9b33-7b915935eb8e",
- "owner": {
- "substance": {
- "uuid": "FCSV-9294730f-3d55-36da-80b9-eb2df162e805"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Octadecylamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1d5622db-e628-386c-a854-3b8e9b231282.json b/test/data/enm/study-FCSV-1d5622db-e628-386c-a854-3b8e9b231282.json
deleted file mode 100644
index 39bd2a7..0000000
--- a/test/data/enm/study-FCSV-1d5622db-e628-386c-a854-3b8e9b231282.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-1d5622db-e628-386c-a854-3b8e9b231282",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc488cf3-986d-34cf-9ee7-12f98873dfe4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 31.6,
- "errQualifier": "sd",
- "errorValue": 3.8
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1d976109-c237-3eda-9b62-34d34abb6d00.json b/test/data/enm/study-FCSV-1d976109-c237-3eda-9b62-34d34abb6d00.json
deleted file mode 100644
index 10b758e..0000000
--- a/test/data/enm/study-FCSV-1d976109-c237-3eda-9b62-34d34abb6d00.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-1d976109-c237-3eda-9b62-34d34abb6d00",
- "owner": {
- "substance": {
- "uuid": "FCSV-9b1b9ad6-e41d-3ddd-8bea-561af1fc27aa"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1df7bae9-3da0-32ec-a2b0-e3161d7cd124.json b/test/data/enm/study-FCSV-1df7bae9-3da0-32ec-a2b0-e3161d7cd124.json
deleted file mode 100644
index 04a7474..0000000
--- a/test/data/enm/study-FCSV-1df7bae9-3da0-32ec-a2b0-e3161d7cd124.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-1df7bae9-3da0-32ec-a2b0-e3161d7cd124",
- "owner": {
- "substance": {
- "uuid": "FCSV-98074b22-064e-3cd7-a732-f5fa3005fa73"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": 25.73,
- "errQualifier": "sd",
- "errorValue": 2.08
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -9.7,
- "errQualifier": "sd",
- "errorValue": 1.29
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1e2a84cd-a43b-3202-8f59-28e79e3e78b7.json b/test/data/enm/study-FCSV-1e2a84cd-a43b-3202-8f59-28e79e3e78b7.json
deleted file mode 100644
index dfbc3be..0000000
--- a/test/data/enm/study-FCSV-1e2a84cd-a43b-3202-8f59-28e79e3e78b7.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-1e2a84cd-a43b-3202-8f59-28e79e3e78b7",
- "owner": {
- "substance": {
- "uuid": "FCSV-9043e884-a5ba-3fa6-a103-dee0c7b1b3dd"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 948.918,
- "errQualifier": "sd",
- "errorValue": 55.04
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.034
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1e31a2da-12bb-38ab-b284-6b8ff9d309ea.json b/test/data/enm/study-FCSV-1e31a2da-12bb-38ab-b284-6b8ff9d309ea.json
deleted file mode 100644
index 6e185e6..0000000
--- a/test/data/enm/study-FCSV-1e31a2da-12bb-38ab-b284-6b8ff9d309ea.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-1e31a2da-12bb-38ab-b284-6b8ff9d309ea",
- "owner": {
- "substance": {
- "uuid": "FCSV-6b15ab65-c2d3-3e58-ac04-18d8e1d45a7a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1e9e9d39-7dd3-38a2-ac56-9b122c02f796.json b/test/data/enm/study-FCSV-1e9e9d39-7dd3-38a2-ac56-9b122c02f796.json
deleted file mode 100644
index add0f06..0000000
--- a/test/data/enm/study-FCSV-1e9e9d39-7dd3-38a2-ac56-9b122c02f796.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-1e9e9d39-7dd3-38a2-ac56-9b122c02f796",
- "owner": {
- "substance": {
- "uuid": "FCSV-c2bce3a6-e09a-3fdc-a1f5-2281b22bb892"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.236,
- "errQualifier": "sd",
- "errorValue": 0.405
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1f208af0-2bca-3d4c-8fe2-5c0f0e1dba19.json b/test/data/enm/study-FCSV-1f208af0-2bca-3d4c-8fe2-5c0f0e1dba19.json
deleted file mode 100644
index f8178cd..0000000
--- a/test/data/enm/study-FCSV-1f208af0-2bca-3d4c-8fe2-5c0f0e1dba19.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-1f208af0-2bca-3d4c-8fe2-5c0f0e1dba19",
- "owner": {
- "substance": {
- "uuid": "FCSV-2ed7ebf8-d11d-3f39-8f05-b0132ec4d7e0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 104.26,
- "errQualifier": "sd",
- "errorValue": 9.14
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 100.88,
- "errQualifier": "sd",
- "errorValue": 0.21
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 103.77,
- "errQualifier": "sd",
- "errorValue": 11.5
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 339.47,
- "errQualifier": "sd",
- "errorValue": 351.45
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 106.24,
- "errQualifier": "sd",
- "errorValue": 10.54
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 82.67,
- "errQualifier": "sd",
- "errorValue": 2.24
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 106.24,
- "errQualifier": "sd",
- "errorValue": 10.21
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 124.24,
- "errQualifier": "sd",
- "errorValue": 26.42
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1f585c98-88b3-3106-824e-af3900143cde.json b/test/data/enm/study-FCSV-1f585c98-88b3-3106-824e-af3900143cde.json
deleted file mode 100644
index eef3617..0000000
--- a/test/data/enm/study-FCSV-1f585c98-88b3-3106-824e-af3900143cde.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-1f585c98-88b3-3106-824e-af3900143cde",
- "owner": {
- "substance": {
- "uuid": "FCSV-9e599ca9-9a8f-3094-a97b-3fb35b08a82a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Ag]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1f5886c8-1a6b-323f-a152-181be4c85e20.json b/test/data/enm/study-FCSV-1f5886c8-1a6b-323f-a152-181be4c85e20.json
deleted file mode 100644
index 3a9e4df..0000000
--- a/test/data/enm/study-FCSV-1f5886c8-1a6b-323f-a152-181be4c85e20.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-1f5886c8-1a6b-323f-a152-181be4c85e20",
- "owner": {
- "substance": {
- "uuid": "FCSV-98074b22-064e-3cd7-a732-f5fa3005fa73"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 59.3,
- "errQualifier": "sd",
- "errorValue": 6.4
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1f698fc0-56ae-3de3-b6b6-2219d6dac8bd.json b/test/data/enm/study-FCSV-1f698fc0-56ae-3de3-b6b6-2219d6dac8bd.json
deleted file mode 100644
index 5dfb9a6..0000000
--- a/test/data/enm/study-FCSV-1f698fc0-56ae-3de3-b6b6-2219d6dac8bd.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-1f698fc0-56ae-3de3-b6b6-2219d6dac8bd",
- "owner": {
- "substance": {
- "uuid": "FCSV-98074b22-064e-3cd7-a732-f5fa3005fa73"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 86.9,
- "errQualifier": "sd",
- "errorValue": 0.72
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 114.53,
- "errQualifier": "sd",
- "errorValue": 17.85
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 87.22,
- "errQualifier": "sd",
- "errorValue": 19.88
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 114.42,
- "errQualifier": "sd",
- "errorValue": 31.9
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 96.47,
- "errQualifier": "sd",
- "errorValue": 15.21
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 92.27,
- "errQualifier": "sd",
- "errorValue": 20.98
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 96.47,
- "errQualifier": "sd",
- "errorValue": 3.5
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 124.7,
- "errQualifier": "sd",
- "errorValue": 21.42
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-1f844a64-a184-3f67-9656-d91bb4e97100.json b/test/data/enm/study-FCSV-1f844a64-a184-3f67-9656-d91bb4e97100.json
deleted file mode 100644
index 0907b57..0000000
--- a/test/data/enm/study-FCSV-1f844a64-a184-3f67-9656-d91bb4e97100.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-1f844a64-a184-3f67-9656-d91bb4e97100",
- "owner": {
- "substance": {
- "uuid": "FCSV-8619e6db-2c01-389e-b05b-e75273d18359"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.136,
- "errQualifier": "sd",
- "errorValue": 0.01
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.156,
- "errQualifier": "sd",
- "errorValue": 0.001
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2014180e-540b-3476-896e-9b0f4d634fed.json b/test/data/enm/study-FCSV-2014180e-540b-3476-896e-9b0f4d634fed.json
deleted file mode 100644
index c320e6a..0000000
--- a/test/data/enm/study-FCSV-2014180e-540b-3476-896e-9b0f4d634fed.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-2014180e-540b-3476-896e-9b0f4d634fed",
- "owner": {
- "substance": {
- "uuid": "FCSV-ee07f574-0b80-31db-b1f2-535f6d6626b0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.024,
- "errQualifier": "sd",
- "errorValue": 0.013
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -5.401,
- "errQualifier": "std",
- "errorValue": 0.809
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-202df90a-3d0c-3b1b-9d14-696425f90097.json b/test/data/enm/study-FCSV-202df90a-3d0c-3b1b-9d14-696425f90097.json
deleted file mode 100644
index f72447a..0000000
--- a/test/data/enm/study-FCSV-202df90a-3d0c-3b1b-9d14-696425f90097.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-202df90a-3d0c-3b1b-9d14-696425f90097",
- "owner": {
- "substance": {
- "uuid": "FCSV-eec391e5-065c-32c1-89ca-3eb40260c1a8"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 603.66,
- "errQualifier": "sd",
- "errorValue": 65.835
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 1,
- "errQualifier": "sem",
- "errorValue": 0.052
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-203eaa51-2c23-3445-84a8-8186db421474.json b/test/data/enm/study-FCSV-203eaa51-2c23-3445-84a8-8186db421474.json
deleted file mode 100644
index a8b21ae..0000000
--- a/test/data/enm/study-FCSV-203eaa51-2c23-3445-84a8-8186db421474.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-203eaa51-2c23-3445-84a8-8186db421474",
- "owner": {
- "substance": {
- "uuid": "FCSV-1a71d2b3-8121-3790-a66b-774b12829bb3"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 23.58,
- "errQualifier": "sd",
- "errorValue": 1.26
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 60.27,
- "errQualifier": "sd",
- "errorValue": 6.12
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 22.67,
- "errQualifier": "sd",
- "errorValue": 0.95
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 45.24,
- "errQualifier": "sd",
- "errorValue": 11.9
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 25.16,
- "errQualifier": "sd",
- "errorValue": 0.78
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 32.93,
- "errQualifier": "sd",
- "errorValue": 11.73
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 25.16,
- "errQualifier": "sd",
- "errorValue": 0.67
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 81.13,
- "errQualifier": "sd",
- "errorValue": 9.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2056b6d4-b2b6-33dd-85bd-1b778c1e9f22.json b/test/data/enm/study-FCSV-2056b6d4-b2b6-33dd-85bd-1b778c1e9f22.json
deleted file mode 100644
index e7e9360..0000000
--- a/test/data/enm/study-FCSV-2056b6d4-b2b6-33dd-85bd-1b778c1e9f22.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-2056b6d4-b2b6-33dd-85bd-1b778c1e9f22",
- "owner": {
- "substance": {
- "uuid": "FCSV-9043e884-a5ba-3fa6-a103-dee0c7b1b3dd"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 59.3,
- "errQualifier": "sd",
- "errorValue": 6.4
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-20791a10-de3a-33d5-b693-f330cf6986aa.json b/test/data/enm/study-FCSV-20791a10-de3a-33d5-b693-f330cf6986aa.json
deleted file mode 100644
index ffccc39..0000000
--- a/test/data/enm/study-FCSV-20791a10-de3a-33d5-b693-f330cf6986aa.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-20791a10-de3a-33d5-b693-f330cf6986aa",
- "owner": {
- "substance": {
- "uuid": "FCSV-cf1d4fd3-f16b-3680-96fa-0f5e4b9dd485"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-207fbb9d-8d7a-31a7-adbb-944d53e0a329.json b/test/data/enm/study-FCSV-207fbb9d-8d7a-31a7-adbb-944d53e0a329.json
deleted file mode 100644
index 5599694..0000000
--- a/test/data/enm/study-FCSV-207fbb9d-8d7a-31a7-adbb-944d53e0a329.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-207fbb9d-8d7a-31a7-adbb-944d53e0a329",
- "owner": {
- "substance": {
- "uuid": "FCSV-9505d90b-f90b-3c94-a6cc-e4ee4c8ec46f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 27.94,
- "errQualifier": "sd",
- "errorValue": 2.96
- }
- },
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- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
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- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
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- "MEDIUM": "Human serum (Sigma #H4522)",
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- "endpoint": "Number Mean Hydrodynamic Diameter",
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- "loValue": 35.19,
- "errQualifier": "sd",
- "errorValue": 7.99
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
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- "MEDIUM": "Human serum (Sigma #H4522)",
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- "result": {
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- "errQualifier": "sd",
- "errorValue": 8.02
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- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
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- "loValue": 142.63,
- "errQualifier": "sd",
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diff --git a/test/data/enm/study-FCSV-210bda2b-25a0-3d46-98f4-4b9e8325af81.json b/test/data/enm/study-FCSV-210bda2b-25a0-3d46-98f4-4b9e8325af81.json
deleted file mode 100644
index e92426a..0000000
--- a/test/data/enm/study-FCSV-210bda2b-25a0-3d46-98f4-4b9e8325af81.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-210bda2b-25a0-3d46-98f4-4b9e8325af81",
- "owner": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
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- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
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- },
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- "effects": [
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- },
- "result": {
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- "errorValue": 1.2
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- },
- {
- "endpoint": "Density",
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- "Remark": null,
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- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
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- "loValue": 0.0
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- "endpoint": "SA/NP",
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- "result": {
- "unit": "cm^2/NP",
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diff --git a/test/data/enm/study-FCSV-211d6a07-cbc6-34fb-a7a5-fbfc4009fea1.json b/test/data/enm/study-FCSV-211d6a07-cbc6-34fb-a7a5-fbfc4009fea1.json
deleted file mode 100644
index d38c525..0000000
--- a/test/data/enm/study-FCSV-211d6a07-cbc6-34fb-a7a5-fbfc4009fea1.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-211d6a07-cbc6-34fb-a7a5-fbfc4009fea1",
- "owner": {
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
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- ""
- ]
- },
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- "r_studyResultType": "experimental result",
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- "loValue": "FUNCTIONALIZATION"
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- },
- "result": {
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- "textValue": "(11-Mercaptoundecyl)-N,N,N-trimethylammonium"
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- ]
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diff --git a/test/data/enm/study-FCSV-2160c90e-6eae-3e9e-851d-aab98b9960ef.json b/test/data/enm/study-FCSV-2160c90e-6eae-3e9e-851d-aab98b9960ef.json
deleted file mode 100644
index 599610c..0000000
--- a/test/data/enm/study-FCSV-2160c90e-6eae-3e9e-851d-aab98b9960ef.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-2160c90e-6eae-3e9e-851d-aab98b9960ef",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
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- "endpoint": "TEM",
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- },
- "parameters": {
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- "Type of method": "TEM",
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- "reliability": {
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- {
- "endpoint": "Density",
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- "result": {
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- "result": {
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diff --git a/test/data/enm/study-FCSV-2167b05d-e4de-35f6-9078-08c5a60b7615.json b/test/data/enm/study-FCSV-2167b05d-e4de-35f6-9078-08c5a60b7615.json
deleted file mode 100644
index f065c64..0000000
--- a/test/data/enm/study-FCSV-2167b05d-e4de-35f6-9078-08c5a60b7615.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-2167b05d-e4de-35f6-9078-08c5a60b7615",
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- "year": "2014",
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- },
- "protocol": {
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- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
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- "endpoint": "Absorbance.spectrophotometry.AS.",
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- "parameters": {
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- "effects": [
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- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
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- "loQualifier": "mean",
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- "errQualifier": "sd",
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- {
- "endpoint": "LSPR peak position (nm)",
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- ]
-}
diff --git a/test/data/enm/study-FCSV-21813cea-ad1e-33a5-a280-3c392e0d89a5.json b/test/data/enm/study-FCSV-21813cea-ad1e-33a5-a280-3c392e0d89a5.json
deleted file mode 100644
index 5c0ef9f..0000000
--- a/test/data/enm/study-FCSV-21813cea-ad1e-33a5-a280-3c392e0d89a5.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-21813cea-ad1e-33a5-a280-3c392e0d89a5",
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- },
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- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
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- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
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- "parameters": {
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- "Type of method": "Absorbance.spectrophotometry.AS.",
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diff --git a/test/data/enm/study-FCSV-219e6cbf-c0d3-3e37-9336-5d38b83e2561.json b/test/data/enm/study-FCSV-219e6cbf-c0d3-3e37-9336-5d38b83e2561.json
deleted file mode 100644
index a86677e..0000000
--- a/test/data/enm/study-FCSV-219e6cbf-c0d3-3e37-9336-5d38b83e2561.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-219e6cbf-c0d3-3e37-9336-5d38b83e2561",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
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- "endpoint": "DLS",
- "guideline": [
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- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
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- "reliability": {
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- "effects": [
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- "result": {
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- "loQualifier": "mean",
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- "errQualifier": "sd",
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- {
- "endpoint": "ZETA POTENTIAL",
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- "result": {
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- "loQualifier": "mean",
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- "errQualifier": "sd",
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diff --git a/test/data/enm/study-FCSV-22120041-45e4-3557-87c3-9e18b1c2a985.json b/test/data/enm/study-FCSV-22120041-45e4-3557-87c3-9e18b1c2a985.json
deleted file mode 100644
index f200056..0000000
--- a/test/data/enm/study-FCSV-22120041-45e4-3557-87c3-9e18b1c2a985.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-22120041-45e4-3557-87c3-9e18b1c2a985",
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- "year": "2014",
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- "category": {
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- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
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- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "1-Dodecanethiol"
- }
- },
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "sodium dodecyl sulfate"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2288fe58-1573-3efd-81b9-2539c475d1ae.json b/test/data/enm/study-FCSV-2288fe58-1573-3efd-81b9-2539c475d1ae.json
deleted file mode 100644
index b997074..0000000
--- a/test/data/enm/study-FCSV-2288fe58-1573-3efd-81b9-2539c475d1ae.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-2288fe58-1573-3efd-81b9-2539c475d1ae",
- "owner": {
- "substance": {
- "uuid": "FCSV-cd7105f2-f630-360e-b8dc-ff42b18bb421"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-22b70a1b-f42c-3516-9104-c6514dea801d.json b/test/data/enm/study-FCSV-22b70a1b-f42c-3516-9104-c6514dea801d.json
deleted file mode 100644
index 6f4c890..0000000
--- a/test/data/enm/study-FCSV-22b70a1b-f42c-3516-9104-c6514dea801d.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-22b70a1b-f42c-3516-9104-c6514dea801d",
- "owner": {
- "substance": {
- "uuid": "FCSV-43f0ea59-aa2f-31d8-8d87-19c95ec9be18"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-22bbb494-8e7c-3e71-8521-fa4835374e6e.json b/test/data/enm/study-FCSV-22bbb494-8e7c-3e71-8521-fa4835374e6e.json
deleted file mode 100644
index a4d2bd9..0000000
--- a/test/data/enm/study-FCSV-22bbb494-8e7c-3e71-8521-fa4835374e6e.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-22bbb494-8e7c-3e71-8521-fa4835374e6e",
- "owner": {
- "substance": {
- "uuid": "FCSV-a153cba3-a82d-3e3c-bcbd-335cc5155f44"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-22cc554a-1080-3f99-9ef2-82cda96423bb.json b/test/data/enm/study-FCSV-22cc554a-1080-3f99-9ef2-82cda96423bb.json
deleted file mode 100644
index fdb4f7d..0000000
--- a/test/data/enm/study-FCSV-22cc554a-1080-3f99-9ef2-82cda96423bb.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-22cc554a-1080-3f99-9ef2-82cda96423bb",
- "owner": {
- "substance": {
- "uuid": "FCSV-6405ef25-683e-3763-a4e3-f56eb93174e4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
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- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
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- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
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- "result": {
- "unit": "cm^2/NP",
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diff --git a/test/data/enm/study-FCSV-2329b1e2-5625-3256-ab0a-1e28f86911c6.json b/test/data/enm/study-FCSV-2329b1e2-5625-3256-ab0a-1e28f86911c6.json
deleted file mode 100644
index 65bb0ee..0000000
--- a/test/data/enm/study-FCSV-2329b1e2-5625-3256-ab0a-1e28f86911c6.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-2329b1e2-5625-3256-ab0a-1e28f86911c6",
- "owner": {
- "substance": {
- "uuid": "FCSV-45779e93-a25d-39cc-9294-afc0b59f3cd6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -6.33,
- "errQualifier": "sd",
- "errorValue": 5.81
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -5.91,
- "errQualifier": "sd",
- "errorValue": 1.52
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2340ebf4-ff01-3604-8565-f271d1b4423b.json b/test/data/enm/study-FCSV-2340ebf4-ff01-3604-8565-f271d1b4423b.json
deleted file mode 100644
index c4c35ba..0000000
--- a/test/data/enm/study-FCSV-2340ebf4-ff01-3604-8565-f271d1b4423b.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-2340ebf4-ff01-3604-8565-f271d1b4423b",
- "owner": {
- "substance": {
- "uuid": "FCSV-45779e93-a25d-39cc-9294-afc0b59f3cd6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
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- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-23483f83-4970-311e-b5ec-6b6fbc2ecf99.json b/test/data/enm/study-FCSV-23483f83-4970-311e-b5ec-6b6fbc2ecf99.json
deleted file mode 100644
index 6002822..0000000
--- a/test/data/enm/study-FCSV-23483f83-4970-311e-b5ec-6b6fbc2ecf99.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-23483f83-4970-311e-b5ec-6b6fbc2ecf99",
- "owner": {
- "substance": {
- "uuid": "FCSV-9b1b9ad6-e41d-3ddd-8bea-561af1fc27aa"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.215,
- "errQualifier": "sd",
- "errorValue": 0.018
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.217,
- "errQualifier": "sd",
- "errorValue": 0.005
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-23563efd-632c-3294-bd64-a5064f50698a.json b/test/data/enm/study-FCSV-23563efd-632c-3294-bd64-a5064f50698a.json
deleted file mode 100644
index 958cefb..0000000
--- a/test/data/enm/study-FCSV-23563efd-632c-3294-bd64-a5064f50698a.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-23563efd-632c-3294-bd64-a5064f50698a",
- "owner": {
- "substance": {
- "uuid": "FCSV-1842b3a2-413c-327c-a07a-9905269bafb5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 77.3,
- "errQualifier": "sd",
- "errorValue": 4.18
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 97.68,
- "errQualifier": "sd",
- "errorValue": 4.48
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 77.99,
- "errQualifier": "sd",
- "errorValue": 12.81
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 129.06,
- "errQualifier": "sd",
- "errorValue": 31.43
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 85.01,
- "errQualifier": "sd",
- "errorValue": 9.85
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 81.35,
- "errQualifier": "sd",
- "errorValue": 11.5
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 85.01,
- "errQualifier": "sd",
- "errorValue": 5.64
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 110.59,
- "errQualifier": "sd",
- "errorValue": 6.87
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-235fc139-1b6f-3ae3-8a85-660a408decdf.json b/test/data/enm/study-FCSV-235fc139-1b6f-3ae3-8a85-660a408decdf.json
deleted file mode 100644
index 6486e8c..0000000
--- a/test/data/enm/study-FCSV-235fc139-1b6f-3ae3-8a85-660a408decdf.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-235fc139-1b6f-3ae3-8a85-660a408decdf",
- "owner": {
- "substance": {
- "uuid": "FCSV-ff7d2c8c-3d2f-316a-b890-6f9e7d88df4c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-23c57cad-f686-3f27-b183-58f4f58b75e7.json b/test/data/enm/study-FCSV-23c57cad-f686-3f27-b183-58f4f58b75e7.json
deleted file mode 100644
index ce9c297..0000000
--- a/test/data/enm/study-FCSV-23c57cad-f686-3f27-b183-58f4f58b75e7.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-23c57cad-f686-3f27-b183-58f4f58b75e7",
- "owner": {
- "substance": {
- "uuid": "FCSV-e4b9ce55-bbeb-368b-a1d4-e591b7df742e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 49.97,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 77.26,
- "errQualifier": "sd",
- "errorValue": 0.31
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 28.82,
- "errQualifier": "sd",
- "errorValue": 0.47
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 53.22,
- "errQualifier": "sd",
- "errorValue": 16.67
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 57.17,
- "errQualifier": "sd",
- "errorValue": 0.76
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 45.48,
- "errQualifier": "sd",
- "errorValue": 18.05
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 57.17,
- "errQualifier": "sd",
- "errorValue": 1.38
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 84.26,
- "errQualifier": "sd",
- "errorValue": 3.79
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-244a1a30-a1ed-3f88-89aa-09b42791af69.json b/test/data/enm/study-FCSV-244a1a30-a1ed-3f88-89aa-09b42791af69.json
deleted file mode 100644
index 94b62f0..0000000
--- a/test/data/enm/study-FCSV-244a1a30-a1ed-3f88-89aa-09b42791af69.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-244a1a30-a1ed-3f88-89aa-09b42791af69",
- "owner": {
- "substance": {
- "uuid": "FCSV-f3d54c07-7dd4-3124-b5bf-341eb9eb4e82"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 5.741,
- "errQualifier": "sd",
- "errorValue": 0.669
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2496def2-f369-3b77-b5a5-049ca169404d.json b/test/data/enm/study-FCSV-2496def2-f369-3b77-b5a5-049ca169404d.json
deleted file mode 100644
index 978ad60..0000000
--- a/test/data/enm/study-FCSV-2496def2-f369-3b77-b5a5-049ca169404d.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-2496def2-f369-3b77-b5a5-049ca169404d",
- "owner": {
- "substance": {
- "uuid": "FCSV-31bd6c7b-3247-3db9-93b6-59e0d3ecefa9"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.128,
- "errQualifier": "sd",
- "errorValue": 0.009
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -2.97,
- "errQualifier": "std",
- "errorValue": 0.098
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-25058778-3240-3eed-bc02-b71ca990441e.json b/test/data/enm/study-FCSV-25058778-3240-3eed-bc02-b71ca990441e.json
deleted file mode 100644
index c074c9b..0000000
--- a/test/data/enm/study-FCSV-25058778-3240-3eed-bc02-b71ca990441e.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-25058778-3240-3eed-bc02-b71ca990441e",
- "owner": {
- "substance": {
- "uuid": "FCSV-130b04ab-86e6-38d6-9276-e2db1b4dcffb"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.189,
- "errQualifier": "sd",
- "errorValue": 0.04
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.214,
- "errQualifier": "sd",
- "errorValue": 0.024
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-251c1184-bb36-32ea-b605-b4c27348ec21.json b/test/data/enm/study-FCSV-251c1184-bb36-32ea-b605-b4c27348ec21.json
deleted file mode 100644
index 2041ab3..0000000
--- a/test/data/enm/study-FCSV-251c1184-bb36-32ea-b605-b4c27348ec21.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-251c1184-bb36-32ea-b605-b4c27348ec21",
- "owner": {
- "substance": {
- "uuid": "FCSV-bdd4c371-ffec-34f1-ae5b-2c60d243e867"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-251e615d-5280-3b3f-b0a8-df82d29f63a3.json b/test/data/enm/study-FCSV-251e615d-5280-3b3f-b0a8-df82d29f63a3.json
deleted file mode 100644
index 5540178..0000000
--- a/test/data/enm/study-FCSV-251e615d-5280-3b3f-b0a8-df82d29f63a3.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-251e615d-5280-3b3f-b0a8-df82d29f63a3",
- "owner": {
- "substance": {
- "uuid": "FCSV-de6203a6-aea6-3910-8f49-598f80ab6a17"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -13.98,
- "errQualifier": "sd",
- "errorValue": 8.89
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -8.6,
- "errQualifier": "sd",
- "errorValue": 2.25
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-252b6b2f-8cdd-303d-8a9f-19afae8bea9f.json b/test/data/enm/study-FCSV-252b6b2f-8cdd-303d-8a9f-19afae8bea9f.json
deleted file mode 100644
index 1c34151..0000000
--- a/test/data/enm/study-FCSV-252b6b2f-8cdd-303d-8a9f-19afae8bea9f.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-252b6b2f-8cdd-303d-8a9f-19afae8bea9f",
- "owner": {
- "substance": {
- "uuid": "FCSV-e4b9ce55-bbeb-368b-a1d4-e591b7df742e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-25898b79-92f7-3833-83c3-8093f1ff42d2.json b/test/data/enm/study-FCSV-25898b79-92f7-3833-83c3-8093f1ff42d2.json
deleted file mode 100644
index 31ad0a4..0000000
--- a/test/data/enm/study-FCSV-25898b79-92f7-3833-83c3-8093f1ff42d2.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-25898b79-92f7-3833-83c3-8093f1ff42d2",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc488cf3-986d-34cf-9ee7-12f98873dfe4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.092,
- "errQualifier": "sd",
- "errorValue": 0.117
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -3.436,
- "errQualifier": "std",
- "errorValue": 1.823
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-263b03c8-1ce3-3310-a03b-2188c46d920b.json b/test/data/enm/study-FCSV-263b03c8-1ce3-3310-a03b-2188c46d920b.json
deleted file mode 100644
index f3abc2f..0000000
--- a/test/data/enm/study-FCSV-263b03c8-1ce3-3310-a03b-2188c46d920b.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-263b03c8-1ce3-3310-a03b-2188c46d920b",
- "owner": {
- "substance": {
- "uuid": "FCSV-3c5fb4b0-2e4e-3dae-9eb2-1dbfd202cd13"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Bis(p-sulfonatophenyl)phenylphosphine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-266e466b-3943-36db-b23f-4323481f319d.json b/test/data/enm/study-FCSV-266e466b-3943-36db-b23f-4323481f319d.json
deleted file mode 100644
index 5d57e42..0000000
--- a/test/data/enm/study-FCSV-266e466b-3943-36db-b23f-4323481f319d.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-266e466b-3943-36db-b23f-4323481f319d",
- "owner": {
- "substance": {
- "uuid": "FCSV-9cc7dd73-d27f-35a0-a3f1-81a18429b76a"
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
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- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
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- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-26bb43bf-11d3-3ced-aff5-d6d4184c6adb.json b/test/data/enm/study-FCSV-26bb43bf-11d3-3ced-aff5-d6d4184c6adb.json
deleted file mode 100644
index a9be089..0000000
--- a/test/data/enm/study-FCSV-26bb43bf-11d3-3ced-aff5-d6d4184c6adb.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-26bb43bf-11d3-3ced-aff5-d6d4184c6adb",
- "owner": {
- "substance": {
- "uuid": "FCSV-9043e884-a5ba-3fa6-a103-dee0c7b1b3dd"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
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- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-26c42f29-a869-3e3b-b312-eadf162532a0.json b/test/data/enm/study-FCSV-26c42f29-a869-3e3b-b312-eadf162532a0.json
deleted file mode 100644
index 0c9d27f..0000000
--- a/test/data/enm/study-FCSV-26c42f29-a869-3e3b-b312-eadf162532a0.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-26c42f29-a869-3e3b-b312-eadf162532a0",
- "owner": {
- "substance": {
- "uuid": "FCSV-98074b22-064e-3cd7-a732-f5fa3005fa73"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 844.364,
- "errQualifier": "sd",
- "errorValue": 126.091
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.012
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-27e732d9-9489-3120-a0c6-5f4c87602375.json b/test/data/enm/study-FCSV-27e732d9-9489-3120-a0c6-5f4c87602375.json
deleted file mode 100644
index 585b1c2..0000000
--- a/test/data/enm/study-FCSV-27e732d9-9489-3120-a0c6-5f4c87602375.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-27e732d9-9489-3120-a0c6-5f4c87602375",
- "owner": {
- "substance": {
- "uuid": "FCSV-f3d54c07-7dd4-3124-b5bf-341eb9eb4e82"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 23.8,
- "errQualifier": "sd",
- "errorValue": 0.56
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 55.98,
- "errQualifier": "sd",
- "errorValue": 3.74
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 4.11,
- "errQualifier": "sd",
- "errorValue": 5.12
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 221.93,
- "errQualifier": "sd",
- "errorValue": 331.85
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 29.49,
- "errQualifier": "sd",
- "errorValue": 4.71
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 25.25,
- "errQualifier": "sd",
- "errorValue": 15.43
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 29.49,
- "errQualifier": "sd",
- "errorValue": 1.91
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 83.34,
- "errQualifier": "sd",
- "errorValue": 26.11
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2852a2e8-953c-3ad5-9fde-a71dfe4a8aa5.json b/test/data/enm/study-FCSV-2852a2e8-953c-3ad5-9fde-a71dfe4a8aa5.json
deleted file mode 100644
index 202cfcd..0000000
--- a/test/data/enm/study-FCSV-2852a2e8-953c-3ad5-9fde-a71dfe4a8aa5.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-2852a2e8-953c-3ad5-9fde-a71dfe4a8aa5",
- "owner": {
- "substance": {
- "uuid": "FCSV-1a71d2b3-8121-3790-a66b-774b12829bb3"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2877a6cf-39c2-38bb-9ad3-af3b4e74d4ba.json b/test/data/enm/study-FCSV-2877a6cf-39c2-38bb-9ad3-af3b4e74d4ba.json
deleted file mode 100644
index 79fa476..0000000
--- a/test/data/enm/study-FCSV-2877a6cf-39c2-38bb-9ad3-af3b4e74d4ba.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-2877a6cf-39c2-38bb-9ad3-af3b4e74d4ba",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f5e6fcb-23b9-3222-aa6e-4afcbba47715"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Thiolated poly(L-lysine)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-28b223fb-ecca-3d68-8ba8-813fc73d9a17.json b/test/data/enm/study-FCSV-28b223fb-ecca-3d68-8ba8-813fc73d9a17.json
deleted file mode 100644
index 1d1e332..0000000
--- a/test/data/enm/study-FCSV-28b223fb-ecca-3d68-8ba8-813fc73d9a17.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-28b223fb-ecca-3d68-8ba8-813fc73d9a17",
- "owner": {
- "substance": {
- "uuid": "FCSV-edc7f198-f391-328e-aa68-7d3f00b62af5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-28cc0804-9151-3370-a321-4049d06aa35e.json b/test/data/enm/study-FCSV-28cc0804-9151-3370-a321-4049d06aa35e.json
deleted file mode 100644
index cb74029..0000000
--- a/test/data/enm/study-FCSV-28cc0804-9151-3370-a321-4049d06aa35e.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-28cc0804-9151-3370-a321-4049d06aa35e",
- "owner": {
- "substance": {
- "uuid": "FCSV-c2bce3a6-e09a-3fdc-a1f5-2281b22bb892"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-293c98c9-7112-3ae3-8d88-09a5829dfa1a.json b/test/data/enm/study-FCSV-293c98c9-7112-3ae3-8d88-09a5829dfa1a.json
deleted file mode 100644
index bc02a95..0000000
--- a/test/data/enm/study-FCSV-293c98c9-7112-3ae3-8d88-09a5829dfa1a.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-293c98c9-7112-3ae3-8d88-09a5829dfa1a",
- "owner": {
- "substance": {
- "uuid": "FCSV-7c56798c-f7cd-37d3-8a67-ead57f36db31"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
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- "testmat_form": null
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- "reliability": {
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 5.616,
- "errQualifier": "sd",
- "errorValue": 0.947
- }
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- ]
-}
diff --git a/test/data/enm/study-FCSV-29670742-87c6-342c-8888-1c8994678838.json b/test/data/enm/study-FCSV-29670742-87c6-342c-8888-1c8994678838.json
deleted file mode 100644
index 7888c29..0000000
--- a/test/data/enm/study-FCSV-29670742-87c6-342c-8888-1c8994678838.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-29670742-87c6-342c-8888-1c8994678838",
- "owner": {
- "substance": {
- "uuid": "FCSV-9df9ed76-5f94-3ecb-b661-a56e168a71bf"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-29c729b9-9975-3f3c-8c91-1f0068c64082.json b/test/data/enm/study-FCSV-29c729b9-9975-3f3c-8c91-1f0068c64082.json
deleted file mode 100644
index e0119c5..0000000
--- a/test/data/enm/study-FCSV-29c729b9-9975-3f3c-8c91-1f0068c64082.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-29c729b9-9975-3f3c-8c91-1f0068c64082",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 5.883,
- "errQualifier": "sd",
- "errorValue": 1.013
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2a0a0a9e-5c62-3899-b47b-9e80131727dd.json b/test/data/enm/study-FCSV-2a0a0a9e-5c62-3899-b47b-9e80131727dd.json
deleted file mode 100644
index ab5faba..0000000
--- a/test/data/enm/study-FCSV-2a0a0a9e-5c62-3899-b47b-9e80131727dd.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-2a0a0a9e-5c62-3899-b47b-9e80131727dd",
- "owner": {
- "substance": {
- "uuid": "FCSV-cd7105f2-f630-360e-b8dc-ff42b18bb421"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 249.152,
- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.02
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-2a70de6f-2eb8-3819-8e0d-6c0c53fb1ec2.json b/test/data/enm/study-FCSV-2a70de6f-2eb8-3819-8e0d-6c0c53fb1ec2.json
deleted file mode 100644
index b03e80d..0000000
--- a/test/data/enm/study-FCSV-2a70de6f-2eb8-3819-8e0d-6c0c53fb1ec2.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-2a70de6f-2eb8-3819-8e0d-6c0c53fb1ec2",
- "owner": {
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
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- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_value": null
- },
- "interpretation": {
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- "effects": [
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- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 788.037,
- "errQualifier": "sd",
- "errorValue": 258.154
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 8,
- "errQualifier": "sd",
- "errorValue": 3
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
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diff --git a/test/data/enm/study-FCSV-2a9b6983-3400-339b-9f12-5e22c6b27c30.json b/test/data/enm/study-FCSV-2a9b6983-3400-339b-9f12-5e22c6b27c30.json
deleted file mode 100644
index 37ec7de..0000000
--- a/test/data/enm/study-FCSV-2a9b6983-3400-339b-9f12-5e22c6b27c30.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-2a9b6983-3400-339b-9f12-5e22c6b27c30",
- "owner": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
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- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
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- "effects": [
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- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 655.578,
- "errQualifier": "sd",
- "errorValue": 95.371
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 2
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.037
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-2a9d1f52-4552-3cea-a9b2-6bcd2fac2f94.json b/test/data/enm/study-FCSV-2a9d1f52-4552-3cea-a9b2-6bcd2fac2f94.json
deleted file mode 100644
index e1b1eff..0000000
--- a/test/data/enm/study-FCSV-2a9d1f52-4552-3cea-a9b2-6bcd2fac2f94.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-2a9d1f52-4552-3cea-a9b2-6bcd2fac2f94",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 443.841,
- "errQualifier": "sd",
- "errorValue": 51.709
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.022
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2ac47079-52d2-33b4-997e-cf0f6526faba.json b/test/data/enm/study-FCSV-2ac47079-52d2-33b4-997e-cf0f6526faba.json
deleted file mode 100644
index 78c6871..0000000
--- a/test/data/enm/study-FCSV-2ac47079-52d2-33b4-997e-cf0f6526faba.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-2ac47079-52d2-33b4-997e-cf0f6526faba",
- "owner": {
- "substance": {
- "uuid": "FCSV-07629748-9b8e-381b-a4e6-79b495404e02"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 642.605,
- "errQualifier": "sd",
- "errorValue": 49.206
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 118,
- "errQualifier": "sem",
- "errorValue": 7.708
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2ace3501-be11-35d8-9591-9d6b9377b914.json b/test/data/enm/study-FCSV-2ace3501-be11-35d8-9591-9d6b9377b914.json
deleted file mode 100644
index 92cd30d..0000000
--- a/test/data/enm/study-FCSV-2ace3501-be11-35d8-9591-9d6b9377b914.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-2ace3501-be11-35d8-9591-9d6b9377b914",
- "owner": {
- "substance": {
- "uuid": "FCSV-9bf04ec0-f6b6-30a6-8970-19a51968532e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2b00574a-16d4-3994-b0f5-9229a734f1ae.json b/test/data/enm/study-FCSV-2b00574a-16d4-3994-b0f5-9229a734f1ae.json
deleted file mode 100644
index 0449bc5..0000000
--- a/test/data/enm/study-FCSV-2b00574a-16d4-3994-b0f5-9229a734f1ae.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-2b00574a-16d4-3994-b0f5-9229a734f1ae",
- "owner": {
- "substance": {
- "uuid": "FCSV-a153cba3-a82d-3e3c-bcbd-335cc5155f44"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "alpha-Lipoic acid"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2b161b1d-f3a6-3fa5-8e0e-d136947db558.json b/test/data/enm/study-FCSV-2b161b1d-f3a6-3fa5-8e0e-d136947db558.json
deleted file mode 100644
index 16e8206..0000000
--- a/test/data/enm/study-FCSV-2b161b1d-f3a6-3fa5-8e0e-d136947db558.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-2b161b1d-f3a6-3fa5-8e0e-d136947db558",
- "owner": {
- "substance": {
- "uuid": "FCSV-5c14595c-0e23-3f37-aaad-9988eba09196"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2b2c544c-a8d9-3a75-8c7d-7d405d219800.json b/test/data/enm/study-FCSV-2b2c544c-a8d9-3a75-8c7d-7d405d219800.json
deleted file mode 100644
index 45ada12..0000000
--- a/test/data/enm/study-FCSV-2b2c544c-a8d9-3a75-8c7d-7d405d219800.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-2b2c544c-a8d9-3a75-8c7d-7d405d219800",
- "owner": {
- "substance": {
- "uuid": "FCSV-1c9a58a0-cd91-3636-8f7c-4fd886f8593a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 42.32,
- "errQualifier": "sd",
- "errorValue": 1.52
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 65.4,
- "errQualifier": "sd",
- "errorValue": 4.61
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 39.46,
- "errQualifier": "sd",
- "errorValue": 2.79
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 65.28,
- "errQualifier": "sd",
- "errorValue": 4.05
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 41.57,
- "errQualifier": "sd",
- "errorValue": 2.06
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 62.14,
- "errQualifier": "sd",
- "errorValue": 3.55
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 41.57,
- "errQualifier": "sd",
- "errorValue": 4.21
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 69.93,
- "errQualifier": "sd",
- "errorValue": 4.84
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2b9c255f-5742-3d00-bd5a-95780da4c7ed.json b/test/data/enm/study-FCSV-2b9c255f-5742-3d00-bd5a-95780da4c7ed.json
deleted file mode 100644
index 5a88aba..0000000
--- a/test/data/enm/study-FCSV-2b9c255f-5742-3d00-bd5a-95780da4c7ed.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-2b9c255f-5742-3d00-bd5a-95780da4c7ed",
- "owner": {
- "substance": {
- "uuid": "FCSV-9c9a7234-a74f-326f-a134-79e004c1f687"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Ag]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2c4177e3-09a1-38a1-a0b3-9edc606ab1b0.json b/test/data/enm/study-FCSV-2c4177e3-09a1-38a1-a0b3-9edc606ab1b0.json
deleted file mode 100644
index f684df9..0000000
--- a/test/data/enm/study-FCSV-2c4177e3-09a1-38a1-a0b3-9edc606ab1b0.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-2c4177e3-09a1-38a1-a0b3-9edc606ab1b0",
- "owner": {
- "substance": {
- "uuid": "FCSV-c4fe20ba-de05-36c2-9842-5433ce33bd72"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 1.645,
- "errQualifier": "sd",
- "errorValue": 0.471
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2c55fc4a-ed47-3fa3-8594-c6839e0ca647.json b/test/data/enm/study-FCSV-2c55fc4a-ed47-3fa3-8594-c6839e0ca647.json
deleted file mode 100644
index cbf0c6f..0000000
--- a/test/data/enm/study-FCSV-2c55fc4a-ed47-3fa3-8594-c6839e0ca647.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-2c55fc4a-ed47-3fa3-8594-c6839e0ca647",
- "owner": {
- "substance": {
- "uuid": "FCSV-4c523ea9-f3e8-32f4-9152-f73400aedb67"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -24.63,
- "errQualifier": "sd",
- "errorValue": 1.24
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -6.09,
- "errQualifier": "sd",
- "errorValue": 2.12
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2cbaa04a-3c89-3d27-84aa-5fa442723502.json b/test/data/enm/study-FCSV-2cbaa04a-3c89-3d27-84aa-5fa442723502.json
deleted file mode 100644
index 90216a2..0000000
--- a/test/data/enm/study-FCSV-2cbaa04a-3c89-3d27-84aa-5fa442723502.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-2cbaa04a-3c89-3d27-84aa-5fa442723502",
- "owner": {
- "substance": {
- "uuid": "FCSV-aab0ef77-8a71-36d7-9185-d2f76b9e3567"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 225.611,
- "errQualifier": "sd",
- "errorValue": 7.051
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2cf02ff9-e458-3020-84e9-20fbc6d63465.json b/test/data/enm/study-FCSV-2cf02ff9-e458-3020-84e9-20fbc6d63465.json
deleted file mode 100644
index 14c43a9..0000000
--- a/test/data/enm/study-FCSV-2cf02ff9-e458-3020-84e9-20fbc6d63465.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-2cf02ff9-e458-3020-84e9-20fbc6d63465",
- "owner": {
- "substance": {
- "uuid": "FCSV-74492618-7ff6-39c9-b396-8d7465109083"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
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- "r_studyResultType": "experimental result",
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- },
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- "effects": [
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- "endpoint": "Core size",
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Density",
- "conditions": {
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- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
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- "Remark": null,
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- "result": {
- "unit": "g/mol",
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- "loValue": 197
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- {
- "endpoint": "Mol/NP",
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- "Remark": null,
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- "endpoint": "SA/NP",
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
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diff --git a/test/data/enm/study-FCSV-2d33eb58-5c9c-385d-a1e0-bb284f63f71e.json b/test/data/enm/study-FCSV-2d33eb58-5c9c-385d-a1e0-bb284f63f71e.json
deleted file mode 100644
index efd4098..0000000
--- a/test/data/enm/study-FCSV-2d33eb58-5c9c-385d-a1e0-bb284f63f71e.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-2d33eb58-5c9c-385d-a1e0-bb284f63f71e",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
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- "effects": [
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- "endpoint": "Polydispersity index",
- "conditions": {
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- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 0.23,
- "errQualifier": "sd",
- "errorValue": 0.017
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- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.278,
- "errQualifier": "sd",
- "errorValue": 0.005
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2d3b1cc7-9d82-38ff-a5ab-87d63b5c78c8.json b/test/data/enm/study-FCSV-2d3b1cc7-9d82-38ff-a5ab-87d63b5c78c8.json
deleted file mode 100644
index 239b664..0000000
--- a/test/data/enm/study-FCSV-2d3b1cc7-9d82-38ff-a5ab-87d63b5c78c8.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-2d3b1cc7-9d82-38ff-a5ab-87d63b5c78c8",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
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- "effects": [
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- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.243,
- "errQualifier": "sd",
- "errorValue": 0.024
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.292,
- "errQualifier": "sd",
- "errorValue": 0.085
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
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- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 541.4,
- "errQualifier": "sd",
- "errorValue": 1.41
- }
- }
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diff --git a/test/data/enm/study-FCSV-2d4ac4a6-df6f-366c-99ab-5cb4f3c54d80.json b/test/data/enm/study-FCSV-2d4ac4a6-df6f-366c-99ab-5cb4f3c54d80.json
deleted file mode 100644
index 33a3731..0000000
--- a/test/data/enm/study-FCSV-2d4ac4a6-df6f-366c-99ab-5cb4f3c54d80.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-2d4ac4a6-df6f-366c-99ab-5cb4f3c54d80",
- "owner": {
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
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- "effects": [
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- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": -6.89,
- "errQualifier": "sd",
- "errorValue": 6.51
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -4.41,
- "errQualifier": "sd",
- "errorValue": 5.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2d550fcb-a1a7-3ecf-b8eb-f6748fd69039.json b/test/data/enm/study-FCSV-2d550fcb-a1a7-3ecf-b8eb-f6748fd69039.json
deleted file mode 100644
index dc45413..0000000
--- a/test/data/enm/study-FCSV-2d550fcb-a1a7-3ecf-b8eb-f6748fd69039.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-2d550fcb-a1a7-3ecf-b8eb-f6748fd69039",
- "owner": {
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
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- "effects": [
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- "conditions": {
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- "result": {
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- "loQualifier": "mean",
- "loValue": 0.273,
- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.238,
- "errQualifier": "sd",
- "errorValue": 0.045
- }
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- ]
-}
diff --git a/test/data/enm/study-FCSV-2da2770e-d95d-3cdd-aeed-122f7d074240.json b/test/data/enm/study-FCSV-2da2770e-d95d-3cdd-aeed-122f7d074240.json
deleted file mode 100644
index 94804f0..0000000
--- a/test/data/enm/study-FCSV-2da2770e-d95d-3cdd-aeed-122f7d074240.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-2da2770e-d95d-3cdd-aeed-122f7d074240",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
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- "effects": [
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- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 38.4,
- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Density",
- "conditions": {
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 10.5
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
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- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 108
- }
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- {
- "endpoint": "Mol/NP",
- "conditions": {
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- "Remark": null,
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- "result": {
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- "loQualifier": "",
- "loValue": 0.0
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- {
- "endpoint": "SA/NP",
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- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
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diff --git a/test/data/enm/study-FCSV-2dad9ec5-ce94-3260-b20a-420ba8e322eb.json b/test/data/enm/study-FCSV-2dad9ec5-ce94-3260-b20a-420ba8e322eb.json
deleted file mode 100644
index b82f121..0000000
--- a/test/data/enm/study-FCSV-2dad9ec5-ce94-3260-b20a-420ba8e322eb.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-2dad9ec5-ce94-3260-b20a-420ba8e322eb",
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2dea8469-3f5a-35a1-9028-ee3f873242f6.json b/test/data/enm/study-FCSV-2dea8469-3f5a-35a1-9028-ee3f873242f6.json
deleted file mode 100644
index 63bfa1f..0000000
--- a/test/data/enm/study-FCSV-2dea8469-3f5a-35a1-9028-ee3f873242f6.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-2dea8469-3f5a-35a1-9028-ee3f873242f6",
- "owner": {
- "substance": {
- "uuid": "FCSV-4026a85b-f254-3d35-bd77-c634d38e4a22"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2e0bbe94-3e94-3d10-9a2f-f89aba471c76.json b/test/data/enm/study-FCSV-2e0bbe94-3e94-3d10-9a2f-f89aba471c76.json
deleted file mode 100644
index 8ba1360..0000000
--- a/test/data/enm/study-FCSV-2e0bbe94-3e94-3d10-9a2f-f89aba471c76.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-2e0bbe94-3e94-3d10-9a2f-f89aba471c76",
- "owner": {
- "substance": {
- "uuid": "FCSV-770a2d39-1509-3c93-b28f-1d3e345de450"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.004,
- "errQualifier": "sd",
- "errorValue": 0.006
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -8.116,
- "errQualifier": "std",
- "errorValue": 2.417
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2e11655c-d54d-317f-8c2d-6e3b8c7a7304.json b/test/data/enm/study-FCSV-2e11655c-d54d-317f-8c2d-6e3b8c7a7304.json
deleted file mode 100644
index 415f74d..0000000
--- a/test/data/enm/study-FCSV-2e11655c-d54d-317f-8c2d-6e3b8c7a7304.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-2e11655c-d54d-317f-8c2d-6e3b8c7a7304",
- "owner": {
- "substance": {
- "uuid": "FCSV-80a36fc5-9a73-358c-829b-2e69eea82125"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2e652225-6953-30bf-bfc0-fd1562f1e5c5.json b/test/data/enm/study-FCSV-2e652225-6953-30bf-bfc0-fd1562f1e5c5.json
deleted file mode 100644
index a7b32cc..0000000
--- a/test/data/enm/study-FCSV-2e652225-6953-30bf-bfc0-fd1562f1e5c5.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-2e652225-6953-30bf-bfc0-fd1562f1e5c5",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f5cd32a-3350-300b-91d0-87000ee5d7ee"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 4.602,
- "errQualifier": "sd",
- "errorValue": 0.665
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2eb4073a-afc7-37ac-a361-ea02e938471e.json b/test/data/enm/study-FCSV-2eb4073a-afc7-37ac-a361-ea02e938471e.json
deleted file mode 100644
index 5303336..0000000
--- a/test/data/enm/study-FCSV-2eb4073a-afc7-37ac-a361-ea02e938471e.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-2eb4073a-afc7-37ac-a361-ea02e938471e",
- "owner": {
- "substance": {
- "uuid": "FCSV-f3d54c07-7dd4-3124-b5bf-341eb9eb4e82"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2eb7f4fc-980e-39a7-ad81-137da4447a2d.json b/test/data/enm/study-FCSV-2eb7f4fc-980e-39a7-ad81-137da4447a2d.json
deleted file mode 100644
index cbfd929..0000000
--- a/test/data/enm/study-FCSV-2eb7f4fc-980e-39a7-ad81-137da4447a2d.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-2eb7f4fc-980e-39a7-ad81-137da4447a2d",
- "owner": {
- "substance": {
- "uuid": "FCSV-eec391e5-065c-32c1-89ca-3eb40260c1a8"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "11-Amino-1-undecanethiol"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2edccfb9-db9c-371b-a748-f5e1de3bee65.json b/test/data/enm/study-FCSV-2edccfb9-db9c-371b-a748-f5e1de3bee65.json
deleted file mode 100644
index 8c12a81..0000000
--- a/test/data/enm/study-FCSV-2edccfb9-db9c-371b-a748-f5e1de3bee65.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-2edccfb9-db9c-371b-a748-f5e1de3bee65",
- "owner": {
- "substance": {
- "uuid": "FCSV-2a853f39-424f-3a63-91f3-1300f85ebe73"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2ef9a412-3108-3e48-9e60-8574204ab4f7.json b/test/data/enm/study-FCSV-2ef9a412-3108-3e48-9e60-8574204ab4f7.json
deleted file mode 100644
index 745f2b8..0000000
--- a/test/data/enm/study-FCSV-2ef9a412-3108-3e48-9e60-8574204ab4f7.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-2ef9a412-3108-3e48-9e60-8574204ab4f7",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc77c03d-4e75-3fab-bb3d-17b983663819"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.084,
- "errQualifier": "sd",
- "errorValue": 0.035
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.27,
- "errQualifier": "sd",
- "errorValue": 0.027
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2f0e67fc-7638-3e12-9ad2-c7bda0b48723.json b/test/data/enm/study-FCSV-2f0e67fc-7638-3e12-9ad2-c7bda0b48723.json
deleted file mode 100644
index 11ac99a..0000000
--- a/test/data/enm/study-FCSV-2f0e67fc-7638-3e12-9ad2-c7bda0b48723.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-2f0e67fc-7638-3e12-9ad2-c7bda0b48723",
- "owner": {
- "substance": {
- "uuid": "FCSV-c2bce3a6-e09a-3fdc-a1f5-2281b22bb892"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 31.6,
- "errQualifier": "sd",
- "errorValue": 3.8
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- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
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- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
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- "result": {
- "unit": "cm^2/NP",
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diff --git a/test/data/enm/study-FCSV-2f136a7d-6d7b-3ad9-9a7d-725611579a1c.json b/test/data/enm/study-FCSV-2f136a7d-6d7b-3ad9-9a7d-725611579a1c.json
deleted file mode 100644
index 02a9024..0000000
--- a/test/data/enm/study-FCSV-2f136a7d-6d7b-3ad9-9a7d-725611579a1c.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-2f136a7d-6d7b-3ad9-9a7d-725611579a1c",
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
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- },
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- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
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- "MEDIUM": " "
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- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.314,
- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.34,
- "errQualifier": "sd",
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- }
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- ]
-}
diff --git a/test/data/enm/study-FCSV-2f8cb6f0-a503-3640-b9b9-e29edb3703ed.json b/test/data/enm/study-FCSV-2f8cb6f0-a503-3640-b9b9-e29edb3703ed.json
deleted file mode 100644
index f2f651e..0000000
--- a/test/data/enm/study-FCSV-2f8cb6f0-a503-3640-b9b9-e29edb3703ed.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-2f8cb6f0-a503-3640-b9b9-e29edb3703ed",
- "owner": {
- "substance": {
- "uuid": "FCSV-aab0ef77-8a71-36d7-9185-d2f76b9e3567"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
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- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-2fa8ff94-819e-3457-8b60-5e7d705091be.json b/test/data/enm/study-FCSV-2fa8ff94-819e-3457-8b60-5e7d705091be.json
deleted file mode 100644
index 93d548a..0000000
--- a/test/data/enm/study-FCSV-2fa8ff94-819e-3457-8b60-5e7d705091be.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-2fa8ff94-819e-3457-8b60-5e7d705091be",
- "owner": {
- "substance": {
- "uuid": "FCSV-6b15ab65-c2d3-3e58-ac04-18d8e1d45a7a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 22.16,
- "errQualifier": "sd",
- "errorValue": 1.4
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 57.28,
- "errQualifier": "sd",
- "errorValue": 5.05
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 21.7,
- "errQualifier": "sd",
- "errorValue": 0.96
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 38.73,
- "errQualifier": "sd",
- "errorValue": 15.55
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23.48,
- "errQualifier": "sd",
- "errorValue": 1.22
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 30.32,
- "errQualifier": "sd",
- "errorValue": 10.73
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23.48,
- "errQualifier": "sd",
- "errorValue": 1.75
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 73.94,
- "errQualifier": "sd",
- "errorValue": 9.27
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-303e5e60-796c-3a71-ab32-b28e134e2e50.json b/test/data/enm/study-FCSV-303e5e60-796c-3a71-ab32-b28e134e2e50.json
deleted file mode 100644
index b2823b5..0000000
--- a/test/data/enm/study-FCSV-303e5e60-796c-3a71-ab32-b28e134e2e50.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-303e5e60-796c-3a71-ab32-b28e134e2e50",
- "owner": {
- "substance": {
- "uuid": "FCSV-d1731b11-29a7-3b39-bf48-000a31d9c46b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.005,
- "errQualifier": "sd",
- "errorValue": 0.00067
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -7.59,
- "errQualifier": "std",
- "errorValue": 0.185
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-30563653-53c0-315f-86cb-717e47ee99e5.json b/test/data/enm/study-FCSV-30563653-53c0-315f-86cb-717e47ee99e5.json
deleted file mode 100644
index 60e4891..0000000
--- a/test/data/enm/study-FCSV-30563653-53c0-315f-86cb-717e47ee99e5.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-30563653-53c0-315f-86cb-717e47ee99e5",
- "owner": {
- "substance": {
- "uuid": "FCSV-0d5c0fc7-de56-3507-b651-1c91bf030465"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
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- },
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- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-30716102-dc07-3080-9270-5f23e7fa7379.json b/test/data/enm/study-FCSV-30716102-dc07-3080-9270-5f23e7fa7379.json
deleted file mode 100644
index 31bae60..0000000
--- a/test/data/enm/study-FCSV-30716102-dc07-3080-9270-5f23e7fa7379.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-30716102-dc07-3080-9270-5f23e7fa7379",
- "owner": {
- "substance": {
- "uuid": "FCSV-c2bce3a6-e09a-3fdc-a1f5-2281b22bb892"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.218,
- "errQualifier": "sd",
- "errorValue": 0.008
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.22,
- "errQualifier": "sd",
- "errorValue": 0.0008275
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 525.33,
- "errQualifier": "sd",
- "errorValue": 0.21
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-308b14eb-0a74-38df-8389-232372ac7fc0.json b/test/data/enm/study-FCSV-308b14eb-0a74-38df-8389-232372ac7fc0.json
deleted file mode 100644
index 62f36f3..0000000
--- a/test/data/enm/study-FCSV-308b14eb-0a74-38df-8389-232372ac7fc0.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-308b14eb-0a74-38df-8389-232372ac7fc0",
- "owner": {
- "substance": {
- "uuid": "FCSV-ccd3915e-0b1d-38f4-98b3-02b1a16aace7"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Ag]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-309d9507-c283-3e88-90c4-499ee3affc48.json b/test/data/enm/study-FCSV-309d9507-c283-3e88-90c4-499ee3affc48.json
deleted file mode 100644
index f42534c..0000000
--- a/test/data/enm/study-FCSV-309d9507-c283-3e88-90c4-499ee3affc48.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-309d9507-c283-3e88-90c4-499ee3affc48",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- "effects": [
- {
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- "conditions": {
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
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- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 67.59,
- "errQualifier": "sd",
- "errorValue": 3.81
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 107.61,
- "errQualifier": "sd",
- "errorValue": 1.19
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 66.21,
- "errQualifier": "sd",
- "errorValue": 4.54
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 435.13,
- "errQualifier": "sd",
- "errorValue": 401.5
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 71.74,
- "errQualifier": "sd",
- "errorValue": 4.55
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 99.19,
- "errQualifier": "sd",
- "errorValue": 0.34
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 71.74,
- "errQualifier": "sd",
- "errorValue": 4.43
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 132.73,
- "errQualifier": "sd",
- "errorValue": 22.09
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-30d9a12b-9076-34f5-8936-6c29e67ef2c6.json b/test/data/enm/study-FCSV-30d9a12b-9076-34f5-8936-6c29e67ef2c6.json
deleted file mode 100644
index 501d810..0000000
--- a/test/data/enm/study-FCSV-30d9a12b-9076-34f5-8936-6c29e67ef2c6.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-30d9a12b-9076-34f5-8936-6c29e67ef2c6",
- "owner": {
- "substance": {
- "uuid": "FCSV-6aea0743-7abb-3448-85ce-961b67fca97f"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "11-Amino-1-undecanethiol"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-310eef2b-3013-3bd0-a05f-c71e858f82dc.json b/test/data/enm/study-FCSV-310eef2b-3013-3bd0-a05f-c71e858f82dc.json
deleted file mode 100644
index 9794960..0000000
--- a/test/data/enm/study-FCSV-310eef2b-3013-3bd0-a05f-c71e858f82dc.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-310eef2b-3013-3bd0-a05f-c71e858f82dc",
- "owner": {
- "substance": {
- "uuid": "FCSV-cf1d4fd3-f16b-3680-96fa-0f5e4b9dd485"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 192.686,
- "errQualifier": "sd",
- "errorValue": 98.103
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 8,
- "errQualifier": "sd",
- "errorValue": 4
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.037
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3129c5f7-16ff-3a56-be4b-c7716c529b8a.json b/test/data/enm/study-FCSV-3129c5f7-16ff-3a56-be4b-c7716c529b8a.json
deleted file mode 100644
index c336ac6..0000000
--- a/test/data/enm/study-FCSV-3129c5f7-16ff-3a56-be4b-c7716c529b8a.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-3129c5f7-16ff-3a56-be4b-c7716c529b8a",
- "owner": {
- "substance": {
- "uuid": "FCSV-130b04ab-86e6-38d6-9276-e2db1b4dcffb"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-31328940-3cd8-375f-b624-379758b9034e.json b/test/data/enm/study-FCSV-31328940-3cd8-375f-b624-379758b9034e.json
deleted file mode 100644
index f4a6b1b..0000000
--- a/test/data/enm/study-FCSV-31328940-3cd8-375f-b624-379758b9034e.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-31328940-3cd8-375f-b624-379758b9034e",
- "owner": {
- "substance": {
- "uuid": "FCSV-4683cde2-ec2e-3a2e-974a-3ba15cd79d05"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Stearic acid"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3140ce3a-2d98-3024-b606-c98d22e2d492.json b/test/data/enm/study-FCSV-3140ce3a-2d98-3024-b606-c98d22e2d492.json
deleted file mode 100644
index 6a148a7..0000000
--- a/test/data/enm/study-FCSV-3140ce3a-2d98-3024-b606-c98d22e2d492.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-3140ce3a-2d98-3024-b606-c98d22e2d492",
- "owner": {
- "substance": {
- "uuid": "FCSV-c4e9df58-f3fb-34f6-9c56-0626c12fb1b7"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.286,
- "errQualifier": "sd",
- "errorValue": 0.241
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3147052d-43f3-309c-b1e6-cf680f0e3445.json b/test/data/enm/study-FCSV-3147052d-43f3-309c-b1e6-cf680f0e3445.json
deleted file mode 100644
index e582972..0000000
--- a/test/data/enm/study-FCSV-3147052d-43f3-309c-b1e6-cf680f0e3445.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-3147052d-43f3-309c-b1e6-cf680f0e3445",
- "owner": {
- "substance": {
- "uuid": "FCSV-b38f2b71-aa2d-3d72-af88-166a60bedee2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-31653c7e-9974-387d-8a3f-5629a8d8370f.json b/test/data/enm/study-FCSV-31653c7e-9974-387d-8a3f-5629a8d8370f.json
deleted file mode 100644
index 6077d8c..0000000
--- a/test/data/enm/study-FCSV-31653c7e-9974-387d-8a3f-5629a8d8370f.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-31653c7e-9974-387d-8a3f-5629a8d8370f",
- "owner": {
- "substance": {
- "uuid": "FCSV-50aee86c-a3a2-3c46-86bf-5ac25485fc13"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.164,
- "errQualifier": "sd",
- "errorValue": 0.003
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.261,
- "errQualifier": "sd",
- "errorValue": 0.008
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-32575e9a-d73e-31c0-94f1-f00cc2809ab3.json b/test/data/enm/study-FCSV-32575e9a-d73e-31c0-94f1-f00cc2809ab3.json
deleted file mode 100644
index 1872f1e..0000000
--- a/test/data/enm/study-FCSV-32575e9a-d73e-31c0-94f1-f00cc2809ab3.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-32575e9a-d73e-31c0-94f1-f00cc2809ab3",
- "owner": {
- "substance": {
- "uuid": "FCSV-ef28f16c-6ab1-3d8b-b971-37c08688701f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -2.84,
- "errQualifier": "sd",
- "errorValue": 2
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -5.01,
- "errQualifier": "sd",
- "errorValue": 1.03
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-326b3c14-34f2-32a0-8ebb-fe8252278d9a.json b/test/data/enm/study-FCSV-326b3c14-34f2-32a0-8ebb-fe8252278d9a.json
deleted file mode 100644
index f6529df..0000000
--- a/test/data/enm/study-FCSV-326b3c14-34f2-32a0-8ebb-fe8252278d9a.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-326b3c14-34f2-32a0-8ebb-fe8252278d9a",
- "owner": {
- "substance": {
- "uuid": "FCSV-63da0f0e-51b8-3c56-b5d3-d4e0e9fb06a6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 1.361,
- "errQualifier": "sd",
- "errorValue": 0.16
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-32a9db90-cd4f-3151-ad31-28d1cc855785.json b/test/data/enm/study-FCSV-32a9db90-cd4f-3151-ad31-28d1cc855785.json
deleted file mode 100644
index 0bde521..0000000
--- a/test/data/enm/study-FCSV-32a9db90-cd4f-3151-ad31-28d1cc855785.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-32a9db90-cd4f-3151-ad31-28d1cc855785",
- "owner": {
- "substance": {
- "uuid": "FCSV-f0cbcba3-1cb5-3fa5-82cc-bfd9d1afa21d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.094,
- "errQualifier": "sd",
- "errorValue": 0.007
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.098,
- "errQualifier": "sd",
- "errorValue": 0.003
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-32c29be0-4d2e-3bc8-982a-a9cb76487af3.json b/test/data/enm/study-FCSV-32c29be0-4d2e-3bc8-982a-a9cb76487af3.json
deleted file mode 100644
index e1d0137..0000000
--- a/test/data/enm/study-FCSV-32c29be0-4d2e-3bc8-982a-a9cb76487af3.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-32c29be0-4d2e-3bc8-982a-a9cb76487af3",
- "owner": {
- "substance": {
- "uuid": "FCSV-ffe19c9e-b1a1-3f38-a149-0d587fc5b172"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 255.452,
- "errQualifier": "sd",
- "errorValue": 7.199
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.005
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-32ce5bc5-be2a-3752-9855-069ec49604ea.json b/test/data/enm/study-FCSV-32ce5bc5-be2a-3752-9855-069ec49604ea.json
deleted file mode 100644
index b5a8841..0000000
--- a/test/data/enm/study-FCSV-32ce5bc5-be2a-3752-9855-069ec49604ea.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-32ce5bc5-be2a-3752-9855-069ec49604ea",
- "owner": {
- "substance": {
- "uuid": "FCSV-1f4a28c8-ecc6-342f-8cbf-1ed579dd34f4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.737,
- "errQualifier": "sd",
- "errorValue": 0.454
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -0.441,
- "errQualifier": "std",
- "errorValue": 0.889
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-32fad4f1-aa62-38b6-ab58-d0fe7506ede2.json b/test/data/enm/study-FCSV-32fad4f1-aa62-38b6-ab58-d0fe7506ede2.json
deleted file mode 100644
index dbc9dfd..0000000
--- a/test/data/enm/study-FCSV-32fad4f1-aa62-38b6-ab58-d0fe7506ede2.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-32fad4f1-aa62-38b6-ab58-d0fe7506ede2",
- "owner": {
- "substance": {
- "uuid": "FCSV-9bf04ec0-f6b6-30a6-8970-19a51968532e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.068,
- "errQualifier": "sd",
- "errorValue": 0.018
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.058,
- "errQualifier": "sd",
- "errorValue": 0.016
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3348c642-8804-3b02-afec-62a4463769c2.json b/test/data/enm/study-FCSV-3348c642-8804-3b02-afec-62a4463769c2.json
deleted file mode 100644
index 828b04b..0000000
--- a/test/data/enm/study-FCSV-3348c642-8804-3b02-afec-62a4463769c2.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-3348c642-8804-3b02-afec-62a4463769c2",
- "owner": {
- "substance": {
- "uuid": "FCSV-9964d099-d8aa-3a89-863c-d69fc921bee2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.259,
- "errQualifier": "sd",
- "errorValue": 0.01
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.296,
- "errQualifier": "sd",
- "errorValue": 0.037
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 519.53,
- "errQualifier": "sd",
- "errorValue": 0.06
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3354872b-6d77-3c5a-bf6c-c9eccadd0237.json b/test/data/enm/study-FCSV-3354872b-6d77-3c5a-bf6c-c9eccadd0237.json
deleted file mode 100644
index 025f585..0000000
--- a/test/data/enm/study-FCSV-3354872b-6d77-3c5a-bf6c-c9eccadd0237.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-3354872b-6d77-3c5a-bf6c-c9eccadd0237",
- "owner": {
- "substance": {
- "uuid": "FCSV-1f4a28c8-ecc6-342f-8cbf-1ed579dd34f4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-337595e5-fd70-3200-8c5b-c4698830f585.json b/test/data/enm/study-FCSV-337595e5-fd70-3200-8c5b-c4698830f585.json
deleted file mode 100644
index 97ea8de..0000000
--- a/test/data/enm/study-FCSV-337595e5-fd70-3200-8c5b-c4698830f585.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-337595e5-fd70-3200-8c5b-c4698830f585",
- "owner": {
- "substance": {
- "uuid": "FCSV-770a2d39-1509-3c93-b28f-1d3e345de450"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.122,
- "errQualifier": "sd",
- "errorValue": 0.018
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.146,
- "errQualifier": "sd",
- "errorValue": 0.018
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-338d0253-a7ff-39fc-97c7-2b6230ffc5fd.json b/test/data/enm/study-FCSV-338d0253-a7ff-39fc-97c7-2b6230ffc5fd.json
deleted file mode 100644
index 50eaf68..0000000
--- a/test/data/enm/study-FCSV-338d0253-a7ff-39fc-97c7-2b6230ffc5fd.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-338d0253-a7ff-39fc-97c7-2b6230ffc5fd",
- "owner": {
- "substance": {
- "uuid": "FCSV-9505d90b-f90b-3c94-a6cc-e4ee4c8ec46f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.302,
- "errQualifier": "sd",
- "errorValue": 0.054
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.37,
- "errQualifier": "sd",
- "errorValue": 0.013
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-34311b70-ef35-3f6a-9716-13f4267d4cad.json b/test/data/enm/study-FCSV-34311b70-ef35-3f6a-9716-13f4267d4cad.json
deleted file mode 100644
index d17590e..0000000
--- a/test/data/enm/study-FCSV-34311b70-ef35-3f6a-9716-13f4267d4cad.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-34311b70-ef35-3f6a-9716-13f4267d4cad",
- "owner": {
- "substance": {
- "uuid": "FCSV-cb2f11a0-4af8-318b-8a60-3908f45c2e65"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 432.315,
- "errQualifier": "sd",
- "errorValue": 3.932
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 8,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.007
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-34595c92-e20a-38df-9add-7fe43da82aae.json b/test/data/enm/study-FCSV-34595c92-e20a-38df-9add-7fe43da82aae.json
deleted file mode 100644
index 913495a..0000000
--- a/test/data/enm/study-FCSV-34595c92-e20a-38df-9add-7fe43da82aae.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-34595c92-e20a-38df-9add-7fe43da82aae",
- "owner": {
- "substance": {
- "uuid": "FCSV-ceed5aa6-a62e-3202-9bcf-702a94d34785"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": 15.27,
- "errQualifier": "sd",
- "errorValue": 2.74
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -7.04,
- "errQualifier": "sd",
- "errorValue": 1.31
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3463a70b-8f7c-38a1-a85d-3d815158d416.json b/test/data/enm/study-FCSV-3463a70b-8f7c-38a1-a85d-3d815158d416.json
deleted file mode 100644
index e68b45b..0000000
--- a/test/data/enm/study-FCSV-3463a70b-8f7c-38a1-a85d-3d815158d416.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-3463a70b-8f7c-38a1-a85d-3d815158d416",
- "owner": {
- "substance": {
- "uuid": "FCSV-9294730f-3d55-36da-80b9-eb2df162e805"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 23.12,
- "errQualifier": "sd",
- "errorValue": 3.4
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 41.78,
- "errQualifier": "sd",
- "errorValue": 12
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 6.45,
- "errQualifier": "sd",
- "errorValue": 8.89
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 13.09,
- "errQualifier": "sd",
- "errorValue": 12.62
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31.1,
- "errQualifier": "sd",
- "errorValue": 7.74
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 10.63,
- "errQualifier": "sd",
- "errorValue": 9.68
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31.1,
- "errQualifier": "sd",
- "errorValue": 2.12
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 69.43,
- "errQualifier": "sd",
- "errorValue": 29.32
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-348323b6-81a8-3746-bfe1-f10e67f5c0ff.json b/test/data/enm/study-FCSV-348323b6-81a8-3746-bfe1-f10e67f5c0ff.json
deleted file mode 100644
index b885679..0000000
--- a/test/data/enm/study-FCSV-348323b6-81a8-3746-bfe1-f10e67f5c0ff.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-348323b6-81a8-3746-bfe1-f10e67f5c0ff",
- "owner": {
- "substance": {
- "uuid": "FCSV-7087aac7-6f1d-320f-bfde-5897fe91af64"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.076,
- "errQualifier": "sd",
- "errorValue": 0.042
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.155,
- "errQualifier": "sd",
- "errorValue": 0.018
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-34a07471-b0ab-37e9-ab3a-a413ee36d3cf.json b/test/data/enm/study-FCSV-34a07471-b0ab-37e9-ab3a-a413ee36d3cf.json
deleted file mode 100644
index 014a7df..0000000
--- a/test/data/enm/study-FCSV-34a07471-b0ab-37e9-ab3a-a413ee36d3cf.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-34a07471-b0ab-37e9-ab3a-a413ee36d3cf",
- "owner": {
- "substance": {
- "uuid": "FCSV-8619e6db-2c01-389e-b05b-e75273d18359"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 48.82,
- "errQualifier": "sd",
- "errorValue": 0.42
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 71.85,
- "errQualifier": "sd",
- "errorValue": 7.15
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 48.64,
- "errQualifier": "sd",
- "errorValue": 4.71
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 51.38,
- "errQualifier": "sd",
- "errorValue": 5.53
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 54.06,
- "errQualifier": "sd",
- "errorValue": 6.39
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 41.89,
- "errQualifier": "sd",
- "errorValue": 7.91
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 54.06,
- "errQualifier": "sd",
- "errorValue": 0.94
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 83.1,
- "errQualifier": "sd",
- "errorValue": 10.23
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-34b77ff8-59b6-35ba-9f1c-672b2ab94765.json b/test/data/enm/study-FCSV-34b77ff8-59b6-35ba-9f1c-672b2ab94765.json
deleted file mode 100644
index d31d3ed..0000000
--- a/test/data/enm/study-FCSV-34b77ff8-59b6-35ba-9f1c-672b2ab94765.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-34b77ff8-59b6-35ba-9f1c-672b2ab94765",
- "owner": {
- "substance": {
- "uuid": "FCSV-99734121-3347-3d4e-9bc6-67956450b140"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 40,
- "errQualifier": "sd",
- "errorValue": 0.56
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 62.97,
- "errQualifier": "sd",
- "errorValue": 1.64
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 39.59,
- "errQualifier": "sd",
- "errorValue": 0.76
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 44.04,
- "errQualifier": "sd",
- "errorValue": 18.95
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 43.07,
- "errQualifier": "sd",
- "errorValue": 0.66
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 37.94,
- "errQualifier": "sd",
- "errorValue": 20.72
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 43.07,
- "errQualifier": "sd",
- "errorValue": 1.57
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 69.55,
- "errQualifier": "sd",
- "errorValue": 2.07
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-34be1e93-4ad6-30c7-b131-83effb3ddc60.json b/test/data/enm/study-FCSV-34be1e93-4ad6-30c7-b131-83effb3ddc60.json
deleted file mode 100644
index 2747721..0000000
--- a/test/data/enm/study-FCSV-34be1e93-4ad6-30c7-b131-83effb3ddc60.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-34be1e93-4ad6-30c7-b131-83effb3ddc60",
- "owner": {
- "substance": {
- "uuid": "FCSV-fb5e6048-8ee1-351d-915b-d1669681357e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-34be497f-8cdb-36bd-b3e5-3d6d3b4f487a.json b/test/data/enm/study-FCSV-34be497f-8cdb-36bd-b3e5-3d6d3b4f487a.json
deleted file mode 100644
index 342cbf3..0000000
--- a/test/data/enm/study-FCSV-34be497f-8cdb-36bd-b3e5-3d6d3b4f487a.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-34be497f-8cdb-36bd-b3e5-3d6d3b4f487a",
- "owner": {
- "substance": {
- "uuid": "FCSV-6d8b8701-7fca-3936-a45e-66c17012fc75"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-34e85b56-f082-3918-9a82-dfdd2325dd2c.json b/test/data/enm/study-FCSV-34e85b56-f082-3918-9a82-dfdd2325dd2c.json
deleted file mode 100644
index 4782a6c..0000000
--- a/test/data/enm/study-FCSV-34e85b56-f082-3918-9a82-dfdd2325dd2c.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-34e85b56-f082-3918-9a82-dfdd2325dd2c",
- "owner": {
- "substance": {
- "uuid": "FCSV-8e1a76df-a12d-3254-ae6b-28e20153ef59"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 83.89,
- "errQualifier": "sd",
- "errorValue": 6.01
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 106.63,
- "errQualifier": "sd",
- "errorValue": 0.36
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 261.41,
- "errQualifier": "sd",
- "errorValue": 182.42
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 265.6,
- "errQualifier": "sd",
- "errorValue": 209.86
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 124.01,
- "errQualifier": "sd",
- "errorValue": 8.24
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 64.4,
- "errQualifier": "sd",
- "errorValue": 4.41
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 124.01,
- "errQualifier": "sd",
- "errorValue": 31.9
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 138.23,
- "errQualifier": "sd",
- "errorValue": 8.07
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-350b27d4-6e01-330b-b2a8-a70a2b5f3e8c.json b/test/data/enm/study-FCSV-350b27d4-6e01-330b-b2a8-a70a2b5f3e8c.json
deleted file mode 100644
index 47c475f..0000000
--- a/test/data/enm/study-FCSV-350b27d4-6e01-330b-b2a8-a70a2b5f3e8c.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-350b27d4-6e01-330b-b2a8-a70a2b5f3e8c",
- "owner": {
- "substance": {
- "uuid": "FCSV-6d8b8701-7fca-3936-a45e-66c17012fc75"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.092,
- "errQualifier": "sd",
- "errorValue": 0.02
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.095,
- "errQualifier": "sd",
- "errorValue": 0.002
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3551b393-919c-383f-9dff-9b4bad8411d8.json b/test/data/enm/study-FCSV-3551b393-919c-383f-9dff-9b4bad8411d8.json
deleted file mode 100644
index 8145a77..0000000
--- a/test/data/enm/study-FCSV-3551b393-919c-383f-9dff-9b4bad8411d8.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-3551b393-919c-383f-9dff-9b4bad8411d8",
- "owner": {
- "substance": {
- "uuid": "FCSV-2ed7ebf8-d11d-3f39-8f05-b0132ec4d7e0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 753.038,
- "errQualifier": "sd",
- "errorValue": 0.668
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 8,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.035
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-356a054f-90f0-3a19-8250-dbd4b5deafd2.json b/test/data/enm/study-FCSV-356a054f-90f0-3a19-8250-dbd4b5deafd2.json
deleted file mode 100644
index 7104fe5..0000000
--- a/test/data/enm/study-FCSV-356a054f-90f0-3a19-8250-dbd4b5deafd2.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-356a054f-90f0-3a19-8250-dbd4b5deafd2",
- "owner": {
- "substance": {
- "uuid": "FCSV-206b1a13-e02a-38a0-88ec-d5a8bfdabc55"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.322,
- "errQualifier": "sd",
- "errorValue": 0.02
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.351,
- "errQualifier": "sd",
- "errorValue": 0.014
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 524.93,
- "errQualifier": "sd",
- "errorValue": 0.42
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-35e29236-a0af-38fb-a040-fd9c097c43ef.json b/test/data/enm/study-FCSV-35e29236-a0af-38fb-a040-fd9c097c43ef.json
deleted file mode 100644
index 837ab03..0000000
--- a/test/data/enm/study-FCSV-35e29236-a0af-38fb-a040-fd9c097c43ef.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-35e29236-a0af-38fb-a040-fd9c097c43ef",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc2c755f-9eee-30e3-9e98-1fbb2397c980"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "11-Mercaptoundecanoic acid"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-35ee126a-bf1b-3fc8-a790-9f0ba9e59fda.json b/test/data/enm/study-FCSV-35ee126a-bf1b-3fc8-a790-9f0ba9e59fda.json
deleted file mode 100644
index 57523be..0000000
--- a/test/data/enm/study-FCSV-35ee126a-bf1b-3fc8-a790-9f0ba9e59fda.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-35ee126a-bf1b-3fc8-a790-9f0ba9e59fda",
- "owner": {
- "substance": {
- "uuid": "FCSV-4dd1bf89-e885-3128-abe2-9a87fbbd0242"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-35f8857a-06c0-3c1f-8313-6660a91cf9b8.json b/test/data/enm/study-FCSV-35f8857a-06c0-3c1f-8313-6660a91cf9b8.json
deleted file mode 100644
index 66b2390..0000000
--- a/test/data/enm/study-FCSV-35f8857a-06c0-3c1f-8313-6660a91cf9b8.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-35f8857a-06c0-3c1f-8313-6660a91cf9b8",
- "owner": {
- "substance": {
- "uuid": "FCSV-9a56b1e5-2e22-31c4-b979-e8e9fee728c6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.018,
- "errQualifier": "sd",
- "errorValue": 0.01
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -5.801,
- "errQualifier": "std",
- "errorValue": 0.838
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-365c4ad3-9539-36db-9cdc-e1a28a05c5e9.json b/test/data/enm/study-FCSV-365c4ad3-9539-36db-9cdc-e1a28a05c5e9.json
deleted file mode 100644
index ad6793d..0000000
--- a/test/data/enm/study-FCSV-365c4ad3-9539-36db-9cdc-e1a28a05c5e9.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-365c4ad3-9539-36db-9cdc-e1a28a05c5e9",
- "owner": {
- "substance": {
- "uuid": "FCSV-130b04ab-86e6-38d6-9276-e2db1b4dcffb"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Mercaptoacetic acid"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3688aa90-f8d3-342a-8985-1ca6e2ada6c4.json b/test/data/enm/study-FCSV-3688aa90-f8d3-342a-8985-1ca6e2ada6c4.json
deleted file mode 100644
index e5bc180..0000000
--- a/test/data/enm/study-FCSV-3688aa90-f8d3-342a-8985-1ca6e2ada6c4.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-3688aa90-f8d3-342a-8985-1ca6e2ada6c4",
- "owner": {
- "substance": {
- "uuid": "FCSV-2de5071e-596b-3507-84fc-f9ba470cbcbf"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 235.179,
- "errQualifier": "sd",
- "errorValue": 6.612
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 1,
- "errQualifier": "sem",
- "errorValue": 0.059
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-36917767-8170-33ab-81b1-3a7fe3368f10.json b/test/data/enm/study-FCSV-36917767-8170-33ab-81b1-3a7fe3368f10.json
deleted file mode 100644
index 40df179..0000000
--- a/test/data/enm/study-FCSV-36917767-8170-33ab-81b1-3a7fe3368f10.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-36917767-8170-33ab-81b1-3a7fe3368f10",
- "owner": {
- "substance": {
- "uuid": "FCSV-c2bce3a6-e09a-3fdc-a1f5-2281b22bb892"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Carboxymethyl-poly(ethylene glycol)-thiol (5kDa)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-370fb712-e62f-3bd0-be25-807b64a296ab.json b/test/data/enm/study-FCSV-370fb712-e62f-3bd0-be25-807b64a296ab.json
deleted file mode 100644
index 3825ec3..0000000
--- a/test/data/enm/study-FCSV-370fb712-e62f-3bd0-be25-807b64a296ab.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-370fb712-e62f-3bd0-be25-807b64a296ab",
- "owner": {
- "substance": {
- "uuid": "FCSV-bdd4c371-ffec-34f1-ae5b-2c60d243e867"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Amino-poly(ethylene glycol)-thiol (5kDa)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3797e52d-d50e-3b79-ad45-127f737cdfe2.json b/test/data/enm/study-FCSV-3797e52d-d50e-3b79-ad45-127f737cdfe2.json
deleted file mode 100644
index 331221e..0000000
--- a/test/data/enm/study-FCSV-3797e52d-d50e-3b79-ad45-127f737cdfe2.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-3797e52d-d50e-3b79-ad45-127f737cdfe2",
- "owner": {
- "substance": {
- "uuid": "FCSV-9964d099-d8aa-3a89-863c-d69fc921bee2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -16.94,
- "errQualifier": "sd",
- "errorValue": 4.04
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -10.42,
- "errQualifier": "sd",
- "errorValue": 6.49
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-37a726d6-e5ab-326f-87aa-6041d85c9cd3.json b/test/data/enm/study-FCSV-37a726d6-e5ab-326f-87aa-6041d85c9cd3.json
deleted file mode 100644
index 248a215..0000000
--- a/test/data/enm/study-FCSV-37a726d6-e5ab-326f-87aa-6041d85c9cd3.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-37a726d6-e5ab-326f-87aa-6041d85c9cd3",
- "owner": {
- "substance": {
- "uuid": "FCSV-8e1a76df-a12d-3254-ae6b-28e20153ef59"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.385,
- "errQualifier": "sd",
- "errorValue": 0.054
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.638,
- "errQualifier": "sd",
- "errorValue": 0.022
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 541.18,
- "errQualifier": "sd",
- "errorValue": 0.45
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-37ae689c-1700-3ae9-bac1-6fb644926799.json b/test/data/enm/study-FCSV-37ae689c-1700-3ae9-bac1-6fb644926799.json
deleted file mode 100644
index 79d53d2..0000000
--- a/test/data/enm/study-FCSV-37ae689c-1700-3ae9-bac1-6fb644926799.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-37ae689c-1700-3ae9-bac1-6fb644926799",
- "owner": {
- "substance": {
- "uuid": "FCSV-2b9a077f-bef3-3ffd-a83a-77dd85db129a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Amino-poly(ethylene glycol)-thiol (5kDa) (low density)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-37c881e8-8fce-346d-ab4d-68ef77aadbdf.json b/test/data/enm/study-FCSV-37c881e8-8fce-346d-ab4d-68ef77aadbdf.json
deleted file mode 100644
index 6125180..0000000
--- a/test/data/enm/study-FCSV-37c881e8-8fce-346d-ab4d-68ef77aadbdf.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-37c881e8-8fce-346d-ab4d-68ef77aadbdf",
- "owner": {
- "substance": {
- "uuid": "FCSV-c4e9df58-f3fb-34f6-9c56-0626c12fb1b7"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.162,
- "errQualifier": "sd",
- "errorValue": 0.008
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.252,
- "errQualifier": "sd",
- "errorValue": 0.016
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-386692aa-84ef-3326-b1d3-736cf0f8f42a.json b/test/data/enm/study-FCSV-386692aa-84ef-3326-b1d3-736cf0f8f42a.json
deleted file mode 100644
index ed0f18d..0000000
--- a/test/data/enm/study-FCSV-386692aa-84ef-3326-b1d3-736cf0f8f42a.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-386692aa-84ef-3326-b1d3-736cf0f8f42a",
- "owner": {
- "substance": {
- "uuid": "FCSV-9043e884-a5ba-3fa6-a103-dee0c7b1b3dd"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.108,
- "errQualifier": "sd",
- "errorValue": 0.009
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.1,
- "errQualifier": "sd",
- "errorValue": 0.028
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-38904964-f62a-37a5-bd2f-f665f9d307e4.json b/test/data/enm/study-FCSV-38904964-f62a-37a5-bd2f-f665f9d307e4.json
deleted file mode 100644
index d8fbcca..0000000
--- a/test/data/enm/study-FCSV-38904964-f62a-37a5-bd2f-f665f9d307e4.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-38904964-f62a-37a5-bd2f-f665f9d307e4",
- "owner": {
- "substance": {
- "uuid": "FCSV-1f4a28c8-ecc6-342f-8cbf-1ed579dd34f4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 2.1,
- "errQualifier": "sd",
- "errorValue": 0.27
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3896f522-0467-336a-91bf-76b6028259d5.json b/test/data/enm/study-FCSV-3896f522-0467-336a-91bf-76b6028259d5.json
deleted file mode 100644
index ae61f2a..0000000
--- a/test/data/enm/study-FCSV-3896f522-0467-336a-91bf-76b6028259d5.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-3896f522-0467-336a-91bf-76b6028259d5",
- "owner": {
- "substance": {
- "uuid": "FCSV-924a51b9-97d3-31fb-b289-52688d9d0d3c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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diff --git a/test/data/enm/study-FCSV-390e13ae-9692-3234-9279-da02ffc7ac4a.json b/test/data/enm/study-FCSV-390e13ae-9692-3234-9279-da02ffc7ac4a.json
deleted file mode 100644
index 0eac601..0000000
--- a/test/data/enm/study-FCSV-390e13ae-9692-3234-9279-da02ffc7ac4a.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-390e13ae-9692-3234-9279-da02ffc7ac4a",
- "owner": {
- "substance": {
- "uuid": "FCSV-8dc5c24b-2e89-3833-b94d-920674a956a0"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
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diff --git a/test/data/enm/study-FCSV-3910e1dd-4041-3e7a-ad4b-1fbcaf915140.json b/test/data/enm/study-FCSV-3910e1dd-4041-3e7a-ad4b-1fbcaf915140.json
deleted file mode 100644
index 92a6525..0000000
--- a/test/data/enm/study-FCSV-3910e1dd-4041-3e7a-ad4b-1fbcaf915140.json
+++ /dev/null
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-{
- "uuid": "FCSV-3910e1dd-4041-3e7a-ad4b-1fbcaf915140",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- {
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- "endpoint": "Volume Mean Hydrodynamic Diameter",
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- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
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- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
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diff --git a/test/data/enm/study-FCSV-3964d459-bfae-326a-80e5-527f7cb14ec8.json b/test/data/enm/study-FCSV-3964d459-bfae-326a-80e5-527f7cb14ec8.json
deleted file mode 100644
index be4955b..0000000
--- a/test/data/enm/study-FCSV-3964d459-bfae-326a-80e5-527f7cb14ec8.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-3964d459-bfae-326a-80e5-527f7cb14ec8",
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- "year": "2014",
- "owner": null
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- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
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- "endpoint": "ICP-AES",
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diff --git a/test/data/enm/study-FCSV-399c83d6-1b89-3aef-adec-eaa1df8405a8.json b/test/data/enm/study-FCSV-399c83d6-1b89-3aef-adec-eaa1df8405a8.json
deleted file mode 100644
index af6cfe7..0000000
--- a/test/data/enm/study-FCSV-399c83d6-1b89-3aef-adec-eaa1df8405a8.json
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-{
- "uuid": "FCSV-399c83d6-1b89-3aef-adec-eaa1df8405a8",
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diff --git a/test/data/enm/study-FCSV-39ba2f49-27fd-31c3-9ede-983864c44adc.json b/test/data/enm/study-FCSV-39ba2f49-27fd-31c3-9ede-983864c44adc.json
deleted file mode 100644
index a838036..0000000
--- a/test/data/enm/study-FCSV-39ba2f49-27fd-31c3-9ede-983864c44adc.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
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- "year": "2014",
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diff --git a/test/data/enm/study-FCSV-39c3d441-7015-3457-b0e4-f9b71546509b.json b/test/data/enm/study-FCSV-39c3d441-7015-3457-b0e4-f9b71546509b.json
deleted file mode 100644
index 84bd655..0000000
--- a/test/data/enm/study-FCSV-39c3d441-7015-3457-b0e4-f9b71546509b.json
+++ /dev/null
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-{
- "uuid": "FCSV-39c3d441-7015-3457-b0e4-f9b71546509b",
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diff --git a/test/data/enm/study-FCSV-39cf9cd1-21b3-3a60-a8ac-59d53f68ae53.json b/test/data/enm/study-FCSV-39cf9cd1-21b3-3a60-a8ac-59d53f68ae53.json
deleted file mode 100644
index f169b0c..0000000
--- a/test/data/enm/study-FCSV-39cf9cd1-21b3-3a60-a8ac-59d53f68ae53.json
+++ /dev/null
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-{
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- "year": "2014",
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- "title": "4.5 Particle size distribution (Granulometry)"
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- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 44.48,
- "errQualifier": "sd",
- "errorValue": 4.85
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 52.3,
- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 41.06,
- "errQualifier": "sd",
- "errorValue": 4.21
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 52.3,
- "errQualifier": "sd",
- "errorValue": 5.9
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 58.19,
- "errQualifier": "sd",
- "errorValue": 4.53
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-39d8afd3-6fe2-3e44-b332-fa35013716d4.json b/test/data/enm/study-FCSV-39d8afd3-6fe2-3e44-b332-fa35013716d4.json
deleted file mode 100644
index 51c023a..0000000
--- a/test/data/enm/study-FCSV-39d8afd3-6fe2-3e44-b332-fa35013716d4.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-39d8afd3-6fe2-3e44-b332-fa35013716d4",
- "owner": {
- "substance": {
- "uuid": "FCSV-2de5071e-596b-3507-84fc-f9ba470cbcbf"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.228,
- "errQualifier": "sd",
- "errorValue": 0.07
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.201,
- "errQualifier": "sd",
- "errorValue": 0.061
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-39eec7d6-9810-3d05-8d96-d7cf3af1b5f4.json b/test/data/enm/study-FCSV-39eec7d6-9810-3d05-8d96-d7cf3af1b5f4.json
deleted file mode 100644
index 38d7532..0000000
--- a/test/data/enm/study-FCSV-39eec7d6-9810-3d05-8d96-d7cf3af1b5f4.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-39eec7d6-9810-3d05-8d96-d7cf3af1b5f4",
- "owner": {
- "substance": {
- "uuid": "FCSV-06c1d24b-426b-39ec-8047-700808302325"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3a119664-52ae-3fbf-b899-ffadb2403017.json b/test/data/enm/study-FCSV-3a119664-52ae-3fbf-b899-ffadb2403017.json
deleted file mode 100644
index d4ce433..0000000
--- a/test/data/enm/study-FCSV-3a119664-52ae-3fbf-b899-ffadb2403017.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-3a119664-52ae-3fbf-b899-ffadb2403017",
- "owner": {
- "substance": {
- "uuid": "FCSV-5c14595c-0e23-3f37-aaad-9988eba09196"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 261.016,
- "errQualifier": "sd",
- "errorValue": 2.358
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.021
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3a6eb4a5-5d2c-3763-8626-ea93f11af5a1.json b/test/data/enm/study-FCSV-3a6eb4a5-5d2c-3763-8626-ea93f11af5a1.json
deleted file mode 100644
index ff6bdf3..0000000
--- a/test/data/enm/study-FCSV-3a6eb4a5-5d2c-3763-8626-ea93f11af5a1.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-3a6eb4a5-5d2c-3763-8626-ea93f11af5a1",
- "owner": {
- "substance": {
- "uuid": "FCSV-8a45dec8-a551-33cc-a7ac-7750d9f30389"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.061,
- "errQualifier": "sd",
- "errorValue": 0.028
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -4.041,
- "errQualifier": "std",
- "errorValue": 0.663
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3aae9e57-b78b-3d3c-aa9e-d93461a763f9.json b/test/data/enm/study-FCSV-3aae9e57-b78b-3d3c-aa9e-d93461a763f9.json
deleted file mode 100644
index 7c5f803..0000000
--- a/test/data/enm/study-FCSV-3aae9e57-b78b-3d3c-aa9e-d93461a763f9.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-3aae9e57-b78b-3d3c-aa9e-d93461a763f9",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f0e4035-24d4-3a81-b20b-bd156f210616"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.155,
- "errQualifier": "sd",
- "errorValue": 0.003
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -2.689,
- "errQualifier": "std",
- "errorValue": 0.027
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3abbcb35-172d-3914-96bc-763c9e570209.json b/test/data/enm/study-FCSV-3abbcb35-172d-3914-96bc-763c9e570209.json
deleted file mode 100644
index 3e3d34c..0000000
--- a/test/data/enm/study-FCSV-3abbcb35-172d-3914-96bc-763c9e570209.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-3abbcb35-172d-3914-96bc-763c9e570209",
- "owner": {
- "substance": {
- "uuid": "FCSV-6b272721-ed04-31bd-a4d4-cb6496140e85"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -33.97,
- "errQualifier": "sd",
- "errorValue": 0.94
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -8.14,
- "errQualifier": "sd",
- "errorValue": 1.09
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3b01d0e2-374c-3bf5-98c1-5a04b4ba1e36.json b/test/data/enm/study-FCSV-3b01d0e2-374c-3bf5-98c1-5a04b4ba1e36.json
deleted file mode 100644
index d2c4e31..0000000
--- a/test/data/enm/study-FCSV-3b01d0e2-374c-3bf5-98c1-5a04b4ba1e36.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-3b01d0e2-374c-3bf5-98c1-5a04b4ba1e36",
- "owner": {
- "substance": {
- "uuid": "FCSV-5c14595c-0e23-3f37-aaad-9988eba09196"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.253,
- "errQualifier": "sd",
- "errorValue": 0.007
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.283,
- "errQualifier": "sd",
- "errorValue": 0.006
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 518.4,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3b21a78f-03db-3484-afc2-5d901977c471.json b/test/data/enm/study-FCSV-3b21a78f-03db-3484-afc2-5d901977c471.json
deleted file mode 100644
index b31a453..0000000
--- a/test/data/enm/study-FCSV-3b21a78f-03db-3484-afc2-5d901977c471.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-3b21a78f-03db-3484-afc2-5d901977c471",
- "owner": {
- "substance": {
- "uuid": "FCSV-a4df7f03-50e1-387c-b0b7-2ce62ed03a8c"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.091,
- "errQualifier": "sd",
- "errorValue": 0.011
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.201,
- "errQualifier": "sd",
- "errorValue": 0.011
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3b660583-0c84-347e-adba-0b23500137f2.json b/test/data/enm/study-FCSV-3b660583-0c84-347e-adba-0b23500137f2.json
deleted file mode 100644
index b179a1c..0000000
--- a/test/data/enm/study-FCSV-3b660583-0c84-347e-adba-0b23500137f2.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-3b660583-0c84-347e-adba-0b23500137f2",
- "owner": {
- "substance": {
- "uuid": "FCSV-50aee86c-a3a2-3c46-86bf-5ac25485fc13"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
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- "r_studyResultType": "experimental result",
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- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 31.6,
- "errQualifier": "sd",
- "errorValue": 3.8
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
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- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3b841b07-58b2-3fbd-8cd0-dba1fc16e07a.json b/test/data/enm/study-FCSV-3b841b07-58b2-3fbd-8cd0-dba1fc16e07a.json
deleted file mode 100644
index 110ee21..0000000
--- a/test/data/enm/study-FCSV-3b841b07-58b2-3fbd-8cd0-dba1fc16e07a.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-3b841b07-58b2-3fbd-8cd0-dba1fc16e07a",
- "owner": {
- "substance": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- },
- "effects": [
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- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.091,
- "errQualifier": "sd",
- "errorValue": 0.007
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.057,
- "errQualifier": "sd",
- "errorValue": 0.015
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-3be53fa0-45a9-3486-9491-c43f835f1723.json b/test/data/enm/study-FCSV-3be53fa0-45a9-3486-9491-c43f835f1723.json
deleted file mode 100644
index 8ccd92a..0000000
--- a/test/data/enm/study-FCSV-3be53fa0-45a9-3486-9491-c43f835f1723.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-3be53fa0-45a9-3486-9491-c43f835f1723",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3bf2ad76-d70f-357b-bf05-3d4599247789.json b/test/data/enm/study-FCSV-3bf2ad76-d70f-357b-bf05-3d4599247789.json
deleted file mode 100644
index bf9842d..0000000
--- a/test/data/enm/study-FCSV-3bf2ad76-d70f-357b-bf05-3d4599247789.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-3bf2ad76-d70f-357b-bf05-3d4599247789",
- "owner": {
- "substance": {
- "uuid": "FCSV-f3d54c07-7dd4-3124-b5bf-341eb9eb4e82"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.326,
- "errQualifier": "sd",
- "errorValue": 0.019
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.273,
- "errQualifier": "sd",
- "errorValue": 0.022
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3bfce90c-64a9-3d09-ae6f-43421a562421.json b/test/data/enm/study-FCSV-3bfce90c-64a9-3d09-ae6f-43421a562421.json
deleted file mode 100644
index b03f9bb..0000000
--- a/test/data/enm/study-FCSV-3bfce90c-64a9-3d09-ae6f-43421a562421.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-3bfce90c-64a9-3d09-ae6f-43421a562421",
- "owner": {
- "substance": {
- "uuid": "FCSV-a7f3867d-85fc-33ab-8167-66b73c818f31"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Thiolated poly(allylamine)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3c0ab00d-502b-3981-a684-71c1a8fd3d6e.json b/test/data/enm/study-FCSV-3c0ab00d-502b-3981-a684-71c1a8fd3d6e.json
deleted file mode 100644
index 6807fbe..0000000
--- a/test/data/enm/study-FCSV-3c0ab00d-502b-3981-a684-71c1a8fd3d6e.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-3c0ab00d-502b-3981-a684-71c1a8fd3d6e",
- "owner": {
- "substance": {
- "uuid": "FCSV-06c1d24b-426b-39ec-8047-700808302325"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.058,
- "errQualifier": "sd",
- "errorValue": 0.003
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.121,
- "errQualifier": "sd",
- "errorValue": 0.005
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3cf0b30d-a8ae-3b92-acbf-6e278de12bbb.json b/test/data/enm/study-FCSV-3cf0b30d-a8ae-3b92-acbf-6e278de12bbb.json
deleted file mode 100644
index 2b21810..0000000
--- a/test/data/enm/study-FCSV-3cf0b30d-a8ae-3b92-acbf-6e278de12bbb.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-3cf0b30d-a8ae-3b92-acbf-6e278de12bbb",
- "owner": {
- "substance": {
- "uuid": "FCSV-ff7e8515-cfad-3d76-a918-d6eeab10a91d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 242.478,
- "errQualifier": "sd",
- "errorValue": 1.237
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.042
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3d3420cd-bce3-32a6-af42-1472fea817a1.json b/test/data/enm/study-FCSV-3d3420cd-bce3-32a6-af42-1472fea817a1.json
deleted file mode 100644
index 0d0abb9..0000000
--- a/test/data/enm/study-FCSV-3d3420cd-bce3-32a6-af42-1472fea817a1.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-3d3420cd-bce3-32a6-af42-1472fea817a1",
- "owner": {
- "substance": {
- "uuid": "FCSV-130b04ab-86e6-38d6-9276-e2db1b4dcffb"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 2.967,
- "errQualifier": "sd",
- "errorValue": 1.052
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3dade3c6-a182-3517-a448-31910e79ccca.json b/test/data/enm/study-FCSV-3dade3c6-a182-3517-a448-31910e79ccca.json
deleted file mode 100644
index 1d6d2c7..0000000
--- a/test/data/enm/study-FCSV-3dade3c6-a182-3517-a448-31910e79ccca.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-3dade3c6-a182-3517-a448-31910e79ccca",
- "owner": {
- "substance": {
- "uuid": "FCSV-8a45dec8-a551-33cc-a7ac-7750d9f30389"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3de23ded-f721-3ac2-8e88-bb3184a70acb.json b/test/data/enm/study-FCSV-3de23ded-f721-3ac2-8e88-bb3184a70acb.json
deleted file mode 100644
index b4e1e9c..0000000
--- a/test/data/enm/study-FCSV-3de23ded-f721-3ac2-8e88-bb3184a70acb.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-3de23ded-f721-3ac2-8e88-bb3184a70acb",
- "owner": {
- "substance": {
- "uuid": "FCSV-ceed5aa6-a62e-3202-9bcf-702a94d34785"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 28.94,
- "errQualifier": "sd",
- "errorValue": 1.5
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 52.46,
- "errQualifier": "sd",
- "errorValue": 3.85
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 25.25,
- "errQualifier": "sd",
- "errorValue": 2.62
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 78.53,
- "errQualifier": "sd",
- "errorValue": 62.8
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31.49,
- "errQualifier": "sd",
- "errorValue": 3.1
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 37.65,
- "errQualifier": "sd",
- "errorValue": 3.22
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31.49,
- "errQualifier": "sd",
- "errorValue": 1.95
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 68.15,
- "errQualifier": "sd",
- "errorValue": 23.65
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3e267e9a-8b3b-34a1-beae-32f1fb6bc392.json b/test/data/enm/study-FCSV-3e267e9a-8b3b-34a1-beae-32f1fb6bc392.json
deleted file mode 100644
index 00666bc..0000000
--- a/test/data/enm/study-FCSV-3e267e9a-8b3b-34a1-beae-32f1fb6bc392.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-3e267e9a-8b3b-34a1-beae-32f1fb6bc392",
- "owner": {
- "substance": {
- "uuid": "FCSV-d677545a-5079-3793-8990-4061a6b254c5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 241.52,
- "errQualifier": "sd",
- "errorValue": 4.828
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.007
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3e70b00d-68ae-351a-84cb-43c6fa8e6050.json b/test/data/enm/study-FCSV-3e70b00d-68ae-351a-84cb-43c6fa8e6050.json
deleted file mode 100644
index aa4246a..0000000
--- a/test/data/enm/study-FCSV-3e70b00d-68ae-351a-84cb-43c6fa8e6050.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-3e70b00d-68ae-351a-84cb-43c6fa8e6050",
- "owner": {
- "substance": {
- "uuid": "FCSV-9c9a7234-a74f-326f-a134-79e004c1f687"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3e90f4c3-45be-33f3-8879-cabf7f29498f.json b/test/data/enm/study-FCSV-3e90f4c3-45be-33f3-8879-cabf7f29498f.json
deleted file mode 100644
index 297bcd4..0000000
--- a/test/data/enm/study-FCSV-3e90f4c3-45be-33f3-8879-cabf7f29498f.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-3e90f4c3-45be-33f3-8879-cabf7f29498f",
- "owner": {
- "substance": {
- "uuid": "FCSV-d1731b11-29a7-3b39-bf48-000a31d9c46b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3e9d351e-94fc-3a81-bf79-ead6fe7de2d1.json b/test/data/enm/study-FCSV-3e9d351e-94fc-3a81-bf79-ead6fe7de2d1.json
deleted file mode 100644
index bc37d33..0000000
--- a/test/data/enm/study-FCSV-3e9d351e-94fc-3a81-bf79-ead6fe7de2d1.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-3e9d351e-94fc-3a81-bf79-ead6fe7de2d1",
- "owner": {
- "substance": {
- "uuid": "FCSV-47e98c51-7508-362f-84d3-494bb124b849"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- },
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- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -24.92,
- "errQualifier": "sd",
- "errorValue": 11
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -14.24,
- "errQualifier": "sd",
- "errorValue": 9.19
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3eb255e1-9477-3c2c-937c-7090a1194389.json b/test/data/enm/study-FCSV-3eb255e1-9477-3c2c-937c-7090a1194389.json
deleted file mode 100644
index 7140db3..0000000
--- a/test/data/enm/study-FCSV-3eb255e1-9477-3c2c-937c-7090a1194389.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-3eb255e1-9477-3c2c-937c-7090a1194389",
- "owner": {
- "substance": {
- "uuid": "FCSV-b228fc7b-c407-368a-bc1c-359c7375bb9b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
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- "interpretation": {
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- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.049,
- "errQualifier": "sd",
- "errorValue": 0.136
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3ec13f75-086f-332c-8e12-0f286bc6fb0d.json b/test/data/enm/study-FCSV-3ec13f75-086f-332c-8e12-0f286bc6fb0d.json
deleted file mode 100644
index 0dadd4e..0000000
--- a/test/data/enm/study-FCSV-3ec13f75-086f-332c-8e12-0f286bc6fb0d.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-3ec13f75-086f-332c-8e12-0f286bc6fb0d",
- "owner": {
- "substance": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
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- },
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- },
- "effects": [
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- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3ef1e954-d2cc-383e-a861-e506e46469f7.json b/test/data/enm/study-FCSV-3ef1e954-d2cc-383e-a861-e506e46469f7.json
deleted file mode 100644
index ce80e44..0000000
--- a/test/data/enm/study-FCSV-3ef1e954-d2cc-383e-a861-e506e46469f7.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-3ef1e954-d2cc-383e-a861-e506e46469f7",
- "owner": {
- "substance": {
- "uuid": "FCSV-e5b47d9a-ba9d-3310-8f92-72aad8f0364d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.193,
- "errQualifier": "sd",
- "errorValue": 0.012
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -2.376,
- "errQualifier": "std",
- "errorValue": 0.087
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3f4719d3-979f-324b-9fd7-9709c2b22fea.json b/test/data/enm/study-FCSV-3f4719d3-979f-324b-9fd7-9709c2b22fea.json
deleted file mode 100644
index 724c555..0000000
--- a/test/data/enm/study-FCSV-3f4719d3-979f-324b-9fd7-9709c2b22fea.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-3f4719d3-979f-324b-9fd7-9709c2b22fea",
- "owner": {
- "substance": {
- "uuid": "FCSV-d1731b11-29a7-3b39-bf48-000a31d9c46b"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3f51c872-21e5-3f56-a781-7224a2548d97.json b/test/data/enm/study-FCSV-3f51c872-21e5-3f56-a781-7224a2548d97.json
deleted file mode 100644
index 55edb2c..0000000
--- a/test/data/enm/study-FCSV-3f51c872-21e5-3f56-a781-7224a2548d97.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-3f51c872-21e5-3f56-a781-7224a2548d97",
- "owner": {
- "substance": {
- "uuid": "FCSV-d63a1ea0-3194-3019-a9e0-0960e63b5819"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.037,
- "errQualifier": "sd",
- "errorValue": 0.011
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -4.748,
- "errQualifier": "std",
- "errorValue": 0.413
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3f773a3e-550f-3a44-9ed5-37bf478042a0.json b/test/data/enm/study-FCSV-3f773a3e-550f-3a44-9ed5-37bf478042a0.json
deleted file mode 100644
index eb618d9..0000000
--- a/test/data/enm/study-FCSV-3f773a3e-550f-3a44-9ed5-37bf478042a0.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-3f773a3e-550f-3a44-9ed5-37bf478042a0",
- "owner": {
- "substance": {
- "uuid": "FCSV-9964d099-d8aa-3a89-863c-d69fc921bee2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 5.593,
- "errQualifier": "sd",
- "errorValue": 0.767
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-3f90d155-7a30-31dc-b2e8-bbab84bc48e2.json b/test/data/enm/study-FCSV-3f90d155-7a30-31dc-b2e8-bbab84bc48e2.json
deleted file mode 100644
index ab7ad31..0000000
--- a/test/data/enm/study-FCSV-3f90d155-7a30-31dc-b2e8-bbab84bc48e2.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-3f90d155-7a30-31dc-b2e8-bbab84bc48e2",
- "owner": {
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
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- "interpretation": {
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- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 474.815,
- "errQualifier": "sd",
- "errorValue": 1.346
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
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diff --git a/test/data/enm/study-FCSV-3fa3df34-5892-310a-9289-108625165764.json b/test/data/enm/study-FCSV-3fa3df34-5892-310a-9289-108625165764.json
deleted file mode 100644
index 7fe069b..0000000
--- a/test/data/enm/study-FCSV-3fa3df34-5892-310a-9289-108625165764.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-3fa3df34-5892-310a-9289-108625165764",
- "owner": {
- "substance": {
- "uuid": "FCSV-93c29ebf-e80e-354c-893f-923385c72858"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.226,
- "errQualifier": "sd",
- "errorValue": 0.117
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.476,
- "errQualifier": "sd",
- "errorValue": 0.025
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 518.3,
- "errQualifier": "sd",
- "errorValue": 0.26
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3fda0195-c559-39be-a256-55cab9a4b888.json b/test/data/enm/study-FCSV-3fda0195-c559-39be-a256-55cab9a4b888.json
deleted file mode 100644
index c2790b3..0000000
--- a/test/data/enm/study-FCSV-3fda0195-c559-39be-a256-55cab9a4b888.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-3fda0195-c559-39be-a256-55cab9a4b888",
- "owner": {
- "substance": {
- "uuid": "FCSV-9b1b9ad6-e41d-3ddd-8bea-561af1fc27aa"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -7.34,
- "errQualifier": "sd",
- "errorValue": 1.09
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -5.24,
- "errQualifier": "sd",
- "errorValue": 1.53
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3fe257ad-d8bb-3e54-b6c2-767cb5d79b77.json b/test/data/enm/study-FCSV-3fe257ad-d8bb-3e54-b6c2-767cb5d79b77.json
deleted file mode 100644
index 5f3d42a..0000000
--- a/test/data/enm/study-FCSV-3fe257ad-d8bb-3e54-b6c2-767cb5d79b77.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-3fe257ad-d8bb-3e54-b6c2-767cb5d79b77",
- "owner": {
- "substance": {
- "uuid": "FCSV-bdd4c371-ffec-34f1-ae5b-2c60d243e867"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-3fe25d8f-147e-359a-8587-0131e11ba51e.json b/test/data/enm/study-FCSV-3fe25d8f-147e-359a-8587-0131e11ba51e.json
deleted file mode 100644
index cf53606..0000000
--- a/test/data/enm/study-FCSV-3fe25d8f-147e-359a-8587-0131e11ba51e.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-3fe25d8f-147e-359a-8587-0131e11ba51e",
- "owner": {
- "substance": {
- "uuid": "FCSV-cb2f11a0-4af8-318b-8a60-3908f45c2e65"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "1-Dodecanethiol"
- }
- },
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
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- }
- },
- "result": {
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- "textValue": "hexadecylamine"
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-3ff530da-4247-382e-8a33-a67ba461ed08.json b/test/data/enm/study-FCSV-3ff530da-4247-382e-8a33-a67ba461ed08.json
deleted file mode 100644
index a89873f..0000000
--- a/test/data/enm/study-FCSV-3ff530da-4247-382e-8a33-a67ba461ed08.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-3ff530da-4247-382e-8a33-a67ba461ed08",
- "owner": {
- "substance": {
- "uuid": "FCSV-e4b9ce55-bbeb-368b-a1d4-e591b7df742e"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
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- "effects": [
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- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
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- "result": {
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- "loQualifier": "mean",
- "loValue": 0.279,
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- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 0.31,
- "errQualifier": "sd",
- "errorValue": 0.014
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
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- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 526.1,
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- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-401f5400-c23a-3890-b606-49ccc2c603de.json b/test/data/enm/study-FCSV-401f5400-c23a-3890-b606-49ccc2c603de.json
deleted file mode 100644
index 47ddb2e..0000000
--- a/test/data/enm/study-FCSV-401f5400-c23a-3890-b606-49ccc2c603de.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-401f5400-c23a-3890-b606-49ccc2c603de",
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- "uuid": "FCSV-c4e9df58-f3fb-34f6-9c56-0626c12fb1b7"
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
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- "result": {
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- "textValue": "1-Dodecanethiol"
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- },
- {
- "endpoint": "FUNCTIONAL GROUP",
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- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
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- "textValue": "hexadecyltrimethylammonium bromide"
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-4044ec71-61f6-389b-bd85-1f2ec49481f2.json b/test/data/enm/study-FCSV-4044ec71-61f6-389b-bd85-1f2ec49481f2.json
deleted file mode 100644
index ade325f..0000000
--- a/test/data/enm/study-FCSV-4044ec71-61f6-389b-bd85-1f2ec49481f2.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-4044ec71-61f6-389b-bd85-1f2ec49481f2",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
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- "loValue": "CORE"
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- },
- "result": {
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- "textValue": "[Au]"
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diff --git a/test/data/enm/study-FCSV-408f4adc-4412-38d8-abda-cc520a5c9683.json b/test/data/enm/study-FCSV-408f4adc-4412-38d8-abda-cc520a5c9683.json
deleted file mode 100644
index 769b2ce..0000000
--- a/test/data/enm/study-FCSV-408f4adc-4412-38d8-abda-cc520a5c9683.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-408f4adc-4412-38d8-abda-cc520a5c9683",
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- "substance": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
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- "result": {
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diff --git a/test/data/enm/study-FCSV-40fe01c5-b4d8-354f-a34c-fb5578c380c2.json b/test/data/enm/study-FCSV-40fe01c5-b4d8-354f-a34c-fb5578c380c2.json
deleted file mode 100644
index fe4fc62..0000000
--- a/test/data/enm/study-FCSV-40fe01c5-b4d8-354f-a34c-fb5578c380c2.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-40fe01c5-b4d8-354f-a34c-fb5578c380c2",
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- },
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- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
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- "endpoint": "Absorbance.spectrophotometry.AS.",
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- "doi: 10.1021/nn406018q"
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- "parameters": {
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- "Type of method": "Absorbance.spectrophotometry.AS.",
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- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
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- "result": {
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- "loQualifier": "mean",
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- "errQualifier": "sd",
- "errorValue": 0.06
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- "endpoint": "LSPR peak position (nm)",
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- "loValue": 522.37,
- "errQualifier": "sd",
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diff --git a/test/data/enm/study-FCSV-41230867-8693-34f1-9eed-7147ae23af73.json b/test/data/enm/study-FCSV-41230867-8693-34f1-9eed-7147ae23af73.json
deleted file mode 100644
index 5134ed4..0000000
--- a/test/data/enm/study-FCSV-41230867-8693-34f1-9eed-7147ae23af73.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-41230867-8693-34f1-9eed-7147ae23af73",
- "owner": {
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- }
- },
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- "year": "2014",
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- },
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- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
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- "parameters": {
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- "effects": [
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- "loValue": 0.15,
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- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 0.207,
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diff --git a/test/data/enm/study-FCSV-41261329-7449-39f7-b280-f5218051f0e1.json b/test/data/enm/study-FCSV-41261329-7449-39f7-b280-f5218051f0e1.json
deleted file mode 100644
index 18b240b..0000000
--- a/test/data/enm/study-FCSV-41261329-7449-39f7-b280-f5218051f0e1.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-41261329-7449-39f7-b280-f5218051f0e1",
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- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
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- "title": "4.26 Nanomaterial crystallite and grain size"
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- "endpoint": "DLS",
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- "parameters": {
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- "errQualifier": "sd",
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- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
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- "result": {
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- "loQualifier": "mean",
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- "errQualifier": "sd",
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diff --git a/test/data/enm/study-FCSV-4162a737-eee7-3b0a-89bf-844fa8fdcb6f.json b/test/data/enm/study-FCSV-4162a737-eee7-3b0a-89bf-844fa8fdcb6f.json
deleted file mode 100644
index fc1b8d7..0000000
--- a/test/data/enm/study-FCSV-4162a737-eee7-3b0a-89bf-844fa8fdcb6f.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-4162a737-eee7-3b0a-89bf-844fa8fdcb6f",
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- "year": "2014",
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- },
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- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
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- "textValue": "Thiolated poly(allylamine)"
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diff --git a/test/data/enm/study-FCSV-416764ef-90bc-364c-a78c-68818efb86a3.json b/test/data/enm/study-FCSV-416764ef-90bc-364c-a78c-68818efb86a3.json
deleted file mode 100644
index a704b10..0000000
--- a/test/data/enm/study-FCSV-416764ef-90bc-364c-a78c-68818efb86a3.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-416764ef-90bc-364c-a78c-68818efb86a3",
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- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
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- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
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- "endpoint": "DLS",
- "guideline": [
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- "parameters": {
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diff --git a/test/data/enm/study-FCSV-4182e17e-c078-334b-8b9f-227ad53be581.json b/test/data/enm/study-FCSV-4182e17e-c078-334b-8b9f-227ad53be581.json
deleted file mode 100644
index 3ad7003..0000000
--- a/test/data/enm/study-FCSV-4182e17e-c078-334b-8b9f-227ad53be581.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-4182e17e-c078-334b-8b9f-227ad53be581",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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diff --git a/test/data/enm/study-FCSV-41e64391-35d1-3888-a7a0-3c15e62797db.json b/test/data/enm/study-FCSV-41e64391-35d1-3888-a7a0-3c15e62797db.json
deleted file mode 100644
index 78f74e3..0000000
--- a/test/data/enm/study-FCSV-41e64391-35d1-3888-a7a0-3c15e62797db.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
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diff --git a/test/data/enm/study-FCSV-41fded04-3bc4-349f-8634-74e55074cdbb.json b/test/data/enm/study-FCSV-41fded04-3bc4-349f-8634-74e55074cdbb.json
deleted file mode 100644
index 6e0a6b3..0000000
--- a/test/data/enm/study-FCSV-41fded04-3bc4-349f-8634-74e55074cdbb.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4204bf57-51eb-3c34-8494-07cab70af296.json b/test/data/enm/study-FCSV-4204bf57-51eb-3c34-8494-07cab70af296.json
deleted file mode 100644
index 905bbfa..0000000
--- a/test/data/enm/study-FCSV-4204bf57-51eb-3c34-8494-07cab70af296.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-4204bf57-51eb-3c34-8494-07cab70af296",
- "owner": {
- "substance": {
- "uuid": "FCSV-5b29295c-f2ab-3e5a-bb32-37caac38b002"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -20.27,
- "errQualifier": "sd",
- "errorValue": 6.1
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -8.29,
- "errQualifier": "sd",
- "errorValue": 2.64
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4207ea4d-e2d9-3e49-80c6-7be8abbb858a.json b/test/data/enm/study-FCSV-4207ea4d-e2d9-3e49-80c6-7be8abbb858a.json
deleted file mode 100644
index 5b479c1..0000000
--- a/test/data/enm/study-FCSV-4207ea4d-e2d9-3e49-80c6-7be8abbb858a.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-4207ea4d-e2d9-3e49-80c6-7be8abbb858a",
- "owner": {
- "substance": {
- "uuid": "FCSV-5c14595c-0e23-3f37-aaad-9988eba09196"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4239537d-05d1-32fe-96ad-2e7c5ce70e0d.json b/test/data/enm/study-FCSV-4239537d-05d1-32fe-96ad-2e7c5ce70e0d.json
deleted file mode 100644
index 8e4d924..0000000
--- a/test/data/enm/study-FCSV-4239537d-05d1-32fe-96ad-2e7c5ce70e0d.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-4239537d-05d1-32fe-96ad-2e7c5ce70e0d",
- "owner": {
- "substance": {
- "uuid": "FCSV-9bf04ec0-f6b6-30a6-8970-19a51968532e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 75.8,
- "errQualifier": "sd",
- "errorValue": 4.31
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 103.94,
- "errQualifier": "sd",
- "errorValue": 1.21
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 75.66,
- "errQualifier": "sd",
- "errorValue": 4.79
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 106.11,
- "errQualifier": "sd",
- "errorValue": 1.19
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 79.83,
- "errQualifier": "sd",
- "errorValue": 5.95
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 101.54,
- "errQualifier": "sd",
- "errorValue": 0.16
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 79.83,
- "errQualifier": "sd",
- "errorValue": 2.8
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 108.14,
- "errQualifier": "sd",
- "errorValue": 1.19
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-424e229a-41db-3f70-8d27-68d21f7170ea.json b/test/data/enm/study-FCSV-424e229a-41db-3f70-8d27-68d21f7170ea.json
deleted file mode 100644
index f37bd2c..0000000
--- a/test/data/enm/study-FCSV-424e229a-41db-3f70-8d27-68d21f7170ea.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-424e229a-41db-3f70-8d27-68d21f7170ea",
- "owner": {
- "substance": {
- "uuid": "FCSV-3b96ad7a-bf2d-360d-881a-26094f498af6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4261bc2e-c053-3952-973c-ac8ad4d6dc5d.json b/test/data/enm/study-FCSV-4261bc2e-c053-3952-973c-ac8ad4d6dc5d.json
deleted file mode 100644
index e9e5b8c..0000000
--- a/test/data/enm/study-FCSV-4261bc2e-c053-3952-973c-ac8ad4d6dc5d.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-4261bc2e-c053-3952-973c-ac8ad4d6dc5d",
- "owner": {
- "substance": {
- "uuid": "FCSV-74492618-7ff6-39c9-b396-8d7465109083"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
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- "errQualifier": "sd",
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- },
- {
- "endpoint": "Log2 transformed",
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- "loQualifier": "mean",
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diff --git a/test/data/enm/study-FCSV-4263da67-86a1-3566-b491-4fa8418d72f1.json b/test/data/enm/study-FCSV-4263da67-86a1-3566-b491-4fa8418d72f1.json
deleted file mode 100644
index e24a79f..0000000
--- a/test/data/enm/study-FCSV-4263da67-86a1-3566-b491-4fa8418d72f1.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-4263da67-86a1-3566-b491-4fa8418d72f1",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- "citation": {
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- "year": "2014",
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- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
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- "effects": [
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- "endpoint": "Autot (ICP-AES)",
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- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 713.408,
- "errQualifier": "sd",
- "errorValue": 51.918
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
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- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 7,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
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- "MEDIUM": "Human serum (Sigma #H4522)"
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- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.019
- }
- }
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-}
diff --git a/test/data/enm/study-FCSV-426adae6-b01c-3540-85c8-891b03f76ef8.json b/test/data/enm/study-FCSV-426adae6-b01c-3540-85c8-891b03f76ef8.json
deleted file mode 100644
index 1a07b50..0000000
--- a/test/data/enm/study-FCSV-426adae6-b01c-3540-85c8-891b03f76ef8.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-426adae6-b01c-3540-85c8-891b03f76ef8",
- "owner": {
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- "uuid": "FCSV-c975883b-640e-38a6-aabe-7596e3abcd95"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
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- "reliability": {
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- },
- "effects": [
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- "endpoint": "Spectral counts",
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- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-42d78574-6945-3e20-8410-f72f3d795878.json b/test/data/enm/study-FCSV-42d78574-6945-3e20-8410-f72f3d795878.json
deleted file mode 100644
index bd8ec1e..0000000
--- a/test/data/enm/study-FCSV-42d78574-6945-3e20-8410-f72f3d795878.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-42d78574-6945-3e20-8410-f72f3d795878",
- "owner": {
- "substance": {
- "uuid": "FCSV-07ecc16e-528e-3904-bb96-0812dff8ea65"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.254,
- "errQualifier": "sd",
- "errorValue": 0.044
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -1.975,
- "errQualifier": "std",
- "errorValue": 0.248
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-434df75f-8795-374b-a602-f75325f81b42.json b/test/data/enm/study-FCSV-434df75f-8795-374b-a602-f75325f81b42.json
deleted file mode 100644
index 1348309..0000000
--- a/test/data/enm/study-FCSV-434df75f-8795-374b-a602-f75325f81b42.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-434df75f-8795-374b-a602-f75325f81b42",
- "owner": {
- "substance": {
- "uuid": "FCSV-4026a85b-f254-3d35-bd77-c634d38e4a22"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "4-Mercaptobenzoic acid"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-438555cf-2eda-3b26-b415-4b22efb19ac5.json b/test/data/enm/study-FCSV-438555cf-2eda-3b26-b415-4b22efb19ac5.json
deleted file mode 100644
index 4628dd6..0000000
--- a/test/data/enm/study-FCSV-438555cf-2eda-3b26-b415-4b22efb19ac5.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-438555cf-2eda-3b26-b415-4b22efb19ac5",
- "owner": {
- "substance": {
- "uuid": "FCSV-4026a85b-f254-3d35-bd77-c634d38e4a22"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 4.36,
- "errQualifier": "sd",
- "errorValue": 0.169
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4386ec4e-d982-3b1f-9a7f-ba6fc3df4cc6.json b/test/data/enm/study-FCSV-4386ec4e-d982-3b1f-9a7f-ba6fc3df4cc6.json
deleted file mode 100644
index a8b371d..0000000
--- a/test/data/enm/study-FCSV-4386ec4e-d982-3b1f-9a7f-ba6fc3df4cc6.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-4386ec4e-d982-3b1f-9a7f-ba6fc3df4cc6",
- "owner": {
- "substance": {
- "uuid": "FCSV-0542c513-7015-3169-a1c1-e00f811a7ba0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.328,
- "errQualifier": "sd",
- "errorValue": 0.021
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.325,
- "errQualifier": "sd",
- "errorValue": 0.034
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 526.93,
- "errQualifier": "sd",
- "errorValue": 0.29
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-43fa5449-0b60-3dc8-9d75-7d61d5258a4f.json b/test/data/enm/study-FCSV-43fa5449-0b60-3dc8-9d75-7d61d5258a4f.json
deleted file mode 100644
index 29c58e6..0000000
--- a/test/data/enm/study-FCSV-43fa5449-0b60-3dc8-9d75-7d61d5258a4f.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-43fa5449-0b60-3dc8-9d75-7d61d5258a4f",
- "owner": {
- "substance": {
- "uuid": "FCSV-31bd6c7b-3247-3db9-93b6-59e0d3ecefa9"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 659.098,
- "errQualifier": "sd",
- "errorValue": 78.05
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.059
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-44906023-e829-37b7-b544-83044e775bed.json b/test/data/enm/study-FCSV-44906023-e829-37b7-b544-83044e775bed.json
deleted file mode 100644
index 2ae0a56..0000000
--- a/test/data/enm/study-FCSV-44906023-e829-37b7-b544-83044e775bed.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-44906023-e829-37b7-b544-83044e775bed",
- "owner": {
- "substance": {
- "uuid": "FCSV-05f4c488-5326-3d8a-be41-c57c468b2fa4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Methoxy-poly(ethylene glycol)-thiol (5kDa)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-44b78317-7527-3d66-b67d-6e95767bb8af.json b/test/data/enm/study-FCSV-44b78317-7527-3d66-b67d-6e95767bb8af.json
deleted file mode 100644
index 149cf0f..0000000
--- a/test/data/enm/study-FCSV-44b78317-7527-3d66-b67d-6e95767bb8af.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-44b78317-7527-3d66-b67d-6e95767bb8af",
- "owner": {
- "substance": {
- "uuid": "FCSV-43f0ea59-aa2f-31d8-8d87-19c95ec9be18"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 271.517,
- "errQualifier": "sd",
- "errorValue": 0.048
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.026
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-44dee36b-cae6-3c07-9f5c-942beea6759e.json b/test/data/enm/study-FCSV-44dee36b-cae6-3c07-9f5c-942beea6759e.json
deleted file mode 100644
index ffc7bb9..0000000
--- a/test/data/enm/study-FCSV-44dee36b-cae6-3c07-9f5c-942beea6759e.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-44dee36b-cae6-3c07-9f5c-942beea6759e",
- "owner": {
- "substance": {
- "uuid": "FCSV-bfa499a9-7d1a-34da-bccf-4fc30c65f03d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4506822c-0df9-3a00-b387-fb4196503ee1.json b/test/data/enm/study-FCSV-4506822c-0df9-3a00-b387-fb4196503ee1.json
deleted file mode 100644
index 2d0e4da..0000000
--- a/test/data/enm/study-FCSV-4506822c-0df9-3a00-b387-fb4196503ee1.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-4506822c-0df9-3a00-b387-fb4196503ee1",
- "owner": {
- "substance": {
- "uuid": "FCSV-f0cbcba3-1cb5-3fa5-82cc-bfd9d1afa21d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -28.75,
- "errQualifier": "sd",
- "errorValue": 5
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -9.72,
- "errQualifier": "sd",
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- }
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diff --git a/test/data/enm/study-FCSV-450a5f84-126b-3aed-b8ad-271b21b6ed25.json b/test/data/enm/study-FCSV-450a5f84-126b-3aed-b8ad-271b21b6ed25.json
deleted file mode 100644
index 56da708..0000000
--- a/test/data/enm/study-FCSV-450a5f84-126b-3aed-b8ad-271b21b6ed25.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-450a5f84-126b-3aed-b8ad-271b21b6ed25",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
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- "endpoint": "Absorbance.spectrophotometry.AS.",
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- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
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- "effects": [
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- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
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- "MEDIUM": " "
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- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.271,
- "errQualifier": "sd",
- "errorValue": 0.008
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 0.349,
- "errQualifier": "sd",
- "errorValue": 0.033
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
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- "loQualifier": "mean",
- "loValue": 543.07,
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- }
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-}
diff --git a/test/data/enm/study-FCSV-4534436c-1075-3648-9849-07c997a73007.json b/test/data/enm/study-FCSV-4534436c-1075-3648-9849-07c997a73007.json
deleted file mode 100644
index a903baa..0000000
--- a/test/data/enm/study-FCSV-4534436c-1075-3648-9849-07c997a73007.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-4534436c-1075-3648-9849-07c997a73007",
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- "uuid": "FCSV-62d68a47-f27e-3d76-a7cf-5cacae221ec7"
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
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- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
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- "endpoint": "Bicinchoninic Acid (BCA) Assay",
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- "doi: 10.1021/nn406018q"
- ]
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- "loQualifier": "mean",
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diff --git a/test/data/enm/study-FCSV-453b7dfe-f6f6-3f84-b5db-414eb34cc03d.json b/test/data/enm/study-FCSV-453b7dfe-f6f6-3f84-b5db-414eb34cc03d.json
deleted file mode 100644
index 83664cc..0000000
--- a/test/data/enm/study-FCSV-453b7dfe-f6f6-3f84-b5db-414eb34cc03d.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-453b7dfe-f6f6-3f84-b5db-414eb34cc03d",
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- "year": "2014",
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- "protocol": {
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- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
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diff --git a/test/data/enm/study-FCSV-45403c3e-e2f3-31a1-9d0b-9ab93b3bf243.json b/test/data/enm/study-FCSV-45403c3e-e2f3-31a1-9d0b-9ab93b3bf243.json
deleted file mode 100644
index d34da8f..0000000
--- a/test/data/enm/study-FCSV-45403c3e-e2f3-31a1-9d0b-9ab93b3bf243.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
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diff --git a/test/data/enm/study-FCSV-4579867e-c538-3093-912e-800d87418180.json b/test/data/enm/study-FCSV-4579867e-c538-3093-912e-800d87418180.json
deleted file mode 100644
index 821004a..0000000
--- a/test/data/enm/study-FCSV-4579867e-c538-3093-912e-800d87418180.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-4579867e-c538-3093-912e-800d87418180",
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4616dfcd-0c8d-3582-9053-da73baeaab74.json b/test/data/enm/study-FCSV-4616dfcd-0c8d-3582-9053-da73baeaab74.json
deleted file mode 100644
index 6574789..0000000
--- a/test/data/enm/study-FCSV-4616dfcd-0c8d-3582-9053-da73baeaab74.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-4616dfcd-0c8d-3582-9053-da73baeaab74",
- "owner": {
- "substance": {
- "uuid": "FCSV-815715e8-0cc8-3641-897c-4530d961cfe0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-46465b1f-0e44-35c5-afc5-1203acbbbe9a.json b/test/data/enm/study-FCSV-46465b1f-0e44-35c5-afc5-1203acbbbe9a.json
deleted file mode 100644
index 5e654af..0000000
--- a/test/data/enm/study-FCSV-46465b1f-0e44-35c5-afc5-1203acbbbe9a.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-46465b1f-0e44-35c5-afc5-1203acbbbe9a",
- "owner": {
- "substance": {
- "uuid": "FCSV-0588dd9b-6227-307f-9e6a-6b07d4717e8c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.024,
- "errQualifier": "sd",
- "errorValue": 0.014
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -5.396,
- "errQualifier": "std",
- "errorValue": 0.874
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-464c7d5f-d3a5-3edc-a57a-6f8f0e7067e5.json b/test/data/enm/study-FCSV-464c7d5f-d3a5-3edc-a57a-6f8f0e7067e5.json
deleted file mode 100644
index 4000f83..0000000
--- a/test/data/enm/study-FCSV-464c7d5f-d3a5-3edc-a57a-6f8f0e7067e5.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-464c7d5f-d3a5-3edc-a57a-6f8f0e7067e5",
- "owner": {
- "substance": {
- "uuid": "FCSV-6b15ab65-c2d3-3e58-ac04-18d8e1d45a7a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4673d1d7-35db-33f4-8db8-106e33b507c7.json b/test/data/enm/study-FCSV-4673d1d7-35db-33f4-8db8-106e33b507c7.json
deleted file mode 100644
index 1fc684c..0000000
--- a/test/data/enm/study-FCSV-4673d1d7-35db-33f4-8db8-106e33b507c7.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-4673d1d7-35db-33f4-8db8-106e33b507c7",
- "owner": {
- "substance": {
- "uuid": "FCSV-7c42c2b4-dcbe-39a4-ae4e-0f0c41a7a5a5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -10.71,
- "errQualifier": "sd",
- "errorValue": 2.28
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
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- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -8.45,
- "errQualifier": "sd",
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diff --git a/test/data/enm/study-FCSV-4695730f-2d82-3bd9-91e3-1b5186b42092.json b/test/data/enm/study-FCSV-4695730f-2d82-3bd9-91e3-1b5186b42092.json
deleted file mode 100644
index e74dbf3..0000000
--- a/test/data/enm/study-FCSV-4695730f-2d82-3bd9-91e3-1b5186b42092.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-4695730f-2d82-3bd9-91e3-1b5186b42092",
- "owner": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
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- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
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- "reliability": {
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- "effects": [
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- "result": {
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diff --git a/test/data/enm/study-FCSV-46df40fd-b2d3-3e8b-9687-c8db09da32dc.json b/test/data/enm/study-FCSV-46df40fd-b2d3-3e8b-9687-c8db09da32dc.json
deleted file mode 100644
index 5479299..0000000
--- a/test/data/enm/study-FCSV-46df40fd-b2d3-3e8b-9687-c8db09da32dc.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
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- "citation": {
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- },
- "protocol": {
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- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
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- "title": "4.26 Nanomaterial crystallite and grain size"
- },
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- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
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- "effects": [
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- "MEDIUM": "Human serum (Sigma #H4522)"
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- "result": {
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diff --git a/test/data/enm/study-FCSV-4727ef7c-b1df-3414-9852-a7df6d4081b4.json b/test/data/enm/study-FCSV-4727ef7c-b1df-3414-9852-a7df6d4081b4.json
deleted file mode 100644
index 2407c0f..0000000
--- a/test/data/enm/study-FCSV-4727ef7c-b1df-3414-9852-a7df6d4081b4.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
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- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
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- "endpoint": "Solution-based digestion protocol for serum protein isolates",
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- "doi: 10.1021/nn406018q"
- ]
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- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
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- "reliability": {
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- "endpoint": "Spectral counts",
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4744a190-fcb4-3582-8cec-dae9ca725f42.json b/test/data/enm/study-FCSV-4744a190-fcb4-3582-8cec-dae9ca725f42.json
deleted file mode 100644
index aabf7f0..0000000
--- a/test/data/enm/study-FCSV-4744a190-fcb4-3582-8cec-dae9ca725f42.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-4744a190-fcb4-3582-8cec-dae9ca725f42",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc488cf3-986d-34cf-9ee7-12f98873dfe4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -33.12,
- "errQualifier": "sd",
- "errorValue": 2.07
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -11.36,
- "errQualifier": "sd",
- "errorValue": 2.18
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4749539d-925c-3454-97a3-21f53f25f264.json b/test/data/enm/study-FCSV-4749539d-925c-3454-97a3-21f53f25f264.json
deleted file mode 100644
index 5b4b316..0000000
--- a/test/data/enm/study-FCSV-4749539d-925c-3454-97a3-21f53f25f264.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-4749539d-925c-3454-97a3-21f53f25f264",
- "owner": {
- "substance": {
- "uuid": "FCSV-d6c56b3e-71a2-330b-92b6-9c90e6046eaa"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 31.6,
- "errQualifier": "sd",
- "errorValue": 3.8
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-47c35ce0-48c5-3c02-8a7f-90445283ebc0.json b/test/data/enm/study-FCSV-47c35ce0-48c5-3c02-8a7f-90445283ebc0.json
deleted file mode 100644
index b2d4c31..0000000
--- a/test/data/enm/study-FCSV-47c35ce0-48c5-3c02-8a7f-90445283ebc0.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-47c35ce0-48c5-3c02-8a7f-90445283ebc0",
- "owner": {
- "substance": {
- "uuid": "FCSV-43f0ea59-aa2f-31d8-8d87-19c95ec9be18"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.025,
- "errQualifier": "sd",
- "errorValue": 0.015
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -5.304,
- "errQualifier": "std",
- "errorValue": 0.836
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-47cea58f-f8ae-32d3-a1fb-93cc74821a67.json b/test/data/enm/study-FCSV-47cea58f-f8ae-32d3-a1fb-93cc74821a67.json
deleted file mode 100644
index 490b283..0000000
--- a/test/data/enm/study-FCSV-47cea58f-f8ae-32d3-a1fb-93cc74821a67.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-47cea58f-f8ae-32d3-a1fb-93cc74821a67",
- "owner": {
- "substance": {
- "uuid": "FCSV-9294730f-3d55-36da-80b9-eb2df162e805"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": 18.85,
- "errQualifier": "sd",
- "errorValue": 5.29
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -11.75,
- "errQualifier": "sd",
- "errorValue": 4.55
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4825b545-4ef5-3ed4-9bf2-f9a830e19774.json b/test/data/enm/study-FCSV-4825b545-4ef5-3ed4-9bf2-f9a830e19774.json
deleted file mode 100644
index 53a5ae4..0000000
--- a/test/data/enm/study-FCSV-4825b545-4ef5-3ed4-9bf2-f9a830e19774.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-4825b545-4ef5-3ed4-9bf2-f9a830e19774",
- "owner": {
- "substance": {
- "uuid": "FCSV-e5b47d9a-ba9d-3310-8f92-72aad8f0364d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.57,
- "errQualifier": "sd",
- "errorValue": 0.16
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4845f0f7-0f60-3f76-89d5-0bfe23d69665.json b/test/data/enm/study-FCSV-4845f0f7-0f60-3f76-89d5-0bfe23d69665.json
deleted file mode 100644
index f22e14f..0000000
--- a/test/data/enm/study-FCSV-4845f0f7-0f60-3f76-89d5-0bfe23d69665.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-4845f0f7-0f60-3f76-89d5-0bfe23d69665",
- "owner": {
- "substance": {
- "uuid": "FCSV-9a56b1e5-2e22-31c4-b979-e8e9fee728c6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "2-Naphthalenethiol"
- }
- },
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "poly(vinyl alcohol)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-488bbc52-0e1d-38fe-9d80-570396f0b715.json b/test/data/enm/study-FCSV-488bbc52-0e1d-38fe-9d80-570396f0b715.json
deleted file mode 100644
index aec75e1..0000000
--- a/test/data/enm/study-FCSV-488bbc52-0e1d-38fe-9d80-570396f0b715.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-488bbc52-0e1d-38fe-9d80-570396f0b715",
- "owner": {
- "substance": {
- "uuid": "FCSV-cd7105f2-f630-360e-b8dc-ff42b18bb421"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 82.41,
- "errQualifier": "sd",
- "errorValue": 85.07
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 59.93,
- "errQualifier": "sd",
- "errorValue": 7.88
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 27.08,
- "errQualifier": "sd",
- "errorValue": 13.03
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 33.04,
- "errQualifier": "sd",
- "errorValue": 7.8
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 55.31,
- "errQualifier": "sd",
- "errorValue": 4.92
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 27.7,
- "errQualifier": "sd",
- "errorValue": 3.94
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 55.31,
- "errQualifier": "sd",
- "errorValue": 60.63
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 86.81,
- "errQualifier": "sd",
- "errorValue": 16.23
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4919c250-699f-33a0-9b87-55dabbf41cb9.json b/test/data/enm/study-FCSV-4919c250-699f-33a0-9b87-55dabbf41cb9.json
deleted file mode 100644
index e2744d2..0000000
--- a/test/data/enm/study-FCSV-4919c250-699f-33a0-9b87-55dabbf41cb9.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-4919c250-699f-33a0-9b87-55dabbf41cb9",
- "owner": {
- "substance": {
- "uuid": "FCSV-d63a1ea0-3194-3019-a9e0-0960e63b5819"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4926079e-0b48-39a0-881a-8a844ab94e56.json b/test/data/enm/study-FCSV-4926079e-0b48-39a0-881a-8a844ab94e56.json
deleted file mode 100644
index c151258..0000000
--- a/test/data/enm/study-FCSV-4926079e-0b48-39a0-881a-8a844ab94e56.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-4926079e-0b48-39a0-881a-8a844ab94e56",
- "owner": {
- "substance": {
- "uuid": "FCSV-d677545a-5079-3793-8990-4061a6b254c5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -12.29,
- "errQualifier": "sd",
- "errorValue": 6.38
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -7.48,
- "errQualifier": "sd",
- "errorValue": 3.62
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-49449258-3524-3f04-88fb-6a02d24506ba.json b/test/data/enm/study-FCSV-49449258-3524-3f04-88fb-6a02d24506ba.json
deleted file mode 100644
index db4acc9..0000000
--- a/test/data/enm/study-FCSV-49449258-3524-3f04-88fb-6a02d24506ba.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-49449258-3524-3f04-88fb-6a02d24506ba",
- "owner": {
- "substance": {
- "uuid": "FCSV-cb2f11a0-4af8-318b-8a60-3908f45c2e65"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.735,
- "errQualifier": "sd",
- "errorValue": 0.097
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-496368d1-6170-3d46-b6fc-d9eb7077657f.json b/test/data/enm/study-FCSV-496368d1-6170-3d46-b6fc-d9eb7077657f.json
deleted file mode 100644
index cd76f16..0000000
--- a/test/data/enm/study-FCSV-496368d1-6170-3d46-b6fc-d9eb7077657f.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-496368d1-6170-3d46-b6fc-d9eb7077657f",
- "owner": {
- "substance": {
- "uuid": "FCSV-9505d90b-f90b-3c94-a6cc-e4ee4c8ec46f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -21.68,
- "errQualifier": "sd",
- "errorValue": 1.95
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -5.71,
- "errQualifier": "sd",
- "errorValue": 2.43
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-496c08c4-4109-3bba-97c8-fa7e5920544f.json b/test/data/enm/study-FCSV-496c08c4-4109-3bba-97c8-fa7e5920544f.json
deleted file mode 100644
index ad8e08d..0000000
--- a/test/data/enm/study-FCSV-496c08c4-4109-3bba-97c8-fa7e5920544f.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-496c08c4-4109-3bba-97c8-fa7e5920544f",
- "owner": {
- "substance": {
- "uuid": "FCSV-a3c8dce5-07ab-3ca6-91a0-84072fc24aed"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.032,
- "errQualifier": "sd",
- "errorValue": 0.012
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -4.975,
- "errQualifier": "std",
- "errorValue": 0.525
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-49a1fa8d-d3f2-3fcd-9ab7-7b7dbab14ec7.json b/test/data/enm/study-FCSV-49a1fa8d-d3f2-3fcd-9ab7-7b7dbab14ec7.json
deleted file mode 100644
index 3f9364a..0000000
--- a/test/data/enm/study-FCSV-49a1fa8d-d3f2-3fcd-9ab7-7b7dbab14ec7.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-49a1fa8d-d3f2-3fcd-9ab7-7b7dbab14ec7",
- "owner": {
- "substance": {
- "uuid": "FCSV-d63a1ea0-3194-3019-a9e0-0960e63b5819"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 959.668,
- "errQualifier": "sd",
- "errorValue": 24.982
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.057
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-49c6274d-4eb2-398a-a798-22e1ac1c646a.json b/test/data/enm/study-FCSV-49c6274d-4eb2-398a-a798-22e1ac1c646a.json
deleted file mode 100644
index 52cafed..0000000
--- a/test/data/enm/study-FCSV-49c6274d-4eb2-398a-a798-22e1ac1c646a.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-49c6274d-4eb2-398a-a798-22e1ac1c646a",
- "owner": {
- "substance": {
- "uuid": "FCSV-45779e93-a25d-39cc-9294-afc0b59f3cd6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Carboxymethyl-poly(ethylene glycol)-thiol (5kDa) (low density)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-49ed74d5-6abb-313f-a291-bda7e81a326a.json b/test/data/enm/study-FCSV-49ed74d5-6abb-313f-a291-bda7e81a326a.json
deleted file mode 100644
index 6fc2814..0000000
--- a/test/data/enm/study-FCSV-49ed74d5-6abb-313f-a291-bda7e81a326a.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-49ed74d5-6abb-313f-a291-bda7e81a326a",
- "owner": {
- "substance": {
- "uuid": "FCSV-0542c513-7015-3169-a1c1-e00f811a7ba0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 50.24,
- "errQualifier": "sd",
- "errorValue": 1.9
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 47,
- "errQualifier": "sd",
- "errorValue": 2.06
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 42.83,
- "errQualifier": "sd",
- "errorValue": 11.91
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 44.17,
- "errQualifier": "sd",
- "errorValue": 4.22
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 55.3,
- "errQualifier": "sd",
- "errorValue": 12.35
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 40.75,
- "errQualifier": "sd",
- "errorValue": 4.71
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 55.3,
- "errQualifier": "sd",
- "errorValue": 0.98
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 53.84,
- "errQualifier": "sd",
- "errorValue": 0.81
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4a03f43d-28c0-3641-ad65-83516a35cad6.json b/test/data/enm/study-FCSV-4a03f43d-28c0-3641-ad65-83516a35cad6.json
deleted file mode 100644
index 9808095..0000000
--- a/test/data/enm/study-FCSV-4a03f43d-28c0-3641-ad65-83516a35cad6.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-4a03f43d-28c0-3641-ad65-83516a35cad6",
- "owner": {
- "substance": {
- "uuid": "FCSV-9b1b9ad6-e41d-3ddd-8bea-561af1fc27aa"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.215,
- "errQualifier": "sd",
- "errorValue": 0.003
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.226,
- "errQualifier": "sd",
- "errorValue": 0.03
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 520.03,
- "errQualifier": "sd",
- "errorValue": 0.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4a22e1c0-e308-35b0-9bc2-b965c4aff02c.json b/test/data/enm/study-FCSV-4a22e1c0-e308-35b0-9bc2-b965c4aff02c.json
deleted file mode 100644
index 83041a8..0000000
--- a/test/data/enm/study-FCSV-4a22e1c0-e308-35b0-9bc2-b965c4aff02c.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-4a22e1c0-e308-35b0-9bc2-b965c4aff02c",
- "owner": {
- "substance": {
- "uuid": "FCSV-2b9a077f-bef3-3ffd-a83a-77dd85db129a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
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- "effects": [
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- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
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- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
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- "MEDIUM": "Human serum (Sigma #H4522)"
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- "loQualifier": "mean",
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- "endpoint": "LSPR peak position (nm)",
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diff --git a/test/data/enm/study-FCSV-4a476c89-367d-307a-905d-9e56a4ef46a7.json b/test/data/enm/study-FCSV-4a476c89-367d-307a-905d-9e56a4ef46a7.json
deleted file mode 100644
index c063534..0000000
--- a/test/data/enm/study-FCSV-4a476c89-367d-307a-905d-9e56a4ef46a7.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-4a476c89-367d-307a-905d-9e56a4ef46a7",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
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- "year": "2014",
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- },
- "protocol": {
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- "category": {
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diff --git a/test/data/enm/study-FCSV-4a65f8c8-2425-3c37-ac20-058541a79d25.json b/test/data/enm/study-FCSV-4a65f8c8-2425-3c37-ac20-058541a79d25.json
deleted file mode 100644
index d92c0c8..0000000
--- a/test/data/enm/study-FCSV-4a65f8c8-2425-3c37-ac20-058541a79d25.json
+++ /dev/null
@@ -1,73 +0,0 @@
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diff --git a/test/data/enm/study-FCSV-4a8f0b92-ce55-323a-a96b-b24b26c9dcba.json b/test/data/enm/study-FCSV-4a8f0b92-ce55-323a-a96b-b24b26c9dcba.json
deleted file mode 100644
index 1a8151a..0000000
--- a/test/data/enm/study-FCSV-4a8f0b92-ce55-323a-a96b-b24b26c9dcba.json
+++ /dev/null
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diff --git a/test/data/enm/study-FCSV-4a9b7286-0fc1-35e9-b5c1-36185d2617ce.json b/test/data/enm/study-FCSV-4a9b7286-0fc1-35e9-b5c1-36185d2617ce.json
deleted file mode 100644
index f72c463..0000000
--- a/test/data/enm/study-FCSV-4a9b7286-0fc1-35e9-b5c1-36185d2617ce.json
+++ /dev/null
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-{
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4aee8d09-71de-39c2-94fc-dbd28f8401aa.json b/test/data/enm/study-FCSV-4aee8d09-71de-39c2-94fc-dbd28f8401aa.json
deleted file mode 100644
index 7ffe4a1..0000000
--- a/test/data/enm/study-FCSV-4aee8d09-71de-39c2-94fc-dbd28f8401aa.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-4aee8d09-71de-39c2-94fc-dbd28f8401aa",
- "owner": {
- "substance": {
- "uuid": "FCSV-8dc5c24b-2e89-3833-b94d-920674a956a0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "11-Mercaptoundecanoic acid"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4b98ab7e-e6ef-3022-9aab-000f32abf5e4.json b/test/data/enm/study-FCSV-4b98ab7e-e6ef-3022-9aab-000f32abf5e4.json
deleted file mode 100644
index 7ca11f7..0000000
--- a/test/data/enm/study-FCSV-4b98ab7e-e6ef-3022-9aab-000f32abf5e4.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-4b98ab7e-e6ef-3022-9aab-000f32abf5e4",
- "owner": {
- "substance": {
- "uuid": "FCSV-80a36fc5-9a73-358c-829b-2e69eea82125"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Methoxy-poly(ethylene glycol)-thiol (20kDa)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4bcc50c2-71a3-352d-a4d9-0ba9711c062b.json b/test/data/enm/study-FCSV-4bcc50c2-71a3-352d-a4d9-0ba9711c062b.json
deleted file mode 100644
index 4773e0c..0000000
--- a/test/data/enm/study-FCSV-4bcc50c2-71a3-352d-a4d9-0ba9711c062b.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-4bcc50c2-71a3-352d-a4d9-0ba9711c062b",
- "owner": {
- "substance": {
- "uuid": "FCSV-0e958d54-f957-37d2-91d1-ee8d9961548e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Hexadecylamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4be61e91-7677-324d-a8bc-aa9139f77cc8.json b/test/data/enm/study-FCSV-4be61e91-7677-324d-a8bc-aa9139f77cc8.json
deleted file mode 100644
index dac97cd..0000000
--- a/test/data/enm/study-FCSV-4be61e91-7677-324d-a8bc-aa9139f77cc8.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-4be61e91-7677-324d-a8bc-aa9139f77cc8",
- "owner": {
- "substance": {
- "uuid": "FCSV-7c56798c-f7cd-37d3-8a67-ead57f36db31"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -24.17,
- "errQualifier": "sd",
- "errorValue": 3.32
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -10.71,
- "errQualifier": "sd",
- "errorValue": 1.03
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4bfaf803-0742-3138-8db1-e91ecaf3cc88.json b/test/data/enm/study-FCSV-4bfaf803-0742-3138-8db1-e91ecaf3cc88.json
deleted file mode 100644
index 9a926e6..0000000
--- a/test/data/enm/study-FCSV-4bfaf803-0742-3138-8db1-e91ecaf3cc88.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-4bfaf803-0742-3138-8db1-e91ecaf3cc88",
- "owner": {
- "substance": {
- "uuid": "FCSV-8b5b62c3-7fd2-3bba-b293-b7537e4971b1"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "2-Naphthalenethiol"
- }
- },
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "aminopropanol-modified poly(styrene-co-maleic anhydride)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4c60c5cb-d554-30bf-ae7a-450fbcf0adc5.json b/test/data/enm/study-FCSV-4c60c5cb-d554-30bf-ae7a-450fbcf0adc5.json
deleted file mode 100644
index d4ae81c..0000000
--- a/test/data/enm/study-FCSV-4c60c5cb-d554-30bf-ae7a-450fbcf0adc5.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-4c60c5cb-d554-30bf-ae7a-450fbcf0adc5",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f5cd32a-3350-300b-91d0-87000ee5d7ee"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4c732acb-a2ca-3b37-bf47-6288cc110393.json b/test/data/enm/study-FCSV-4c732acb-a2ca-3b37-bf47-6288cc110393.json
deleted file mode 100644
index 4c3a8ef..0000000
--- a/test/data/enm/study-FCSV-4c732acb-a2ca-3b37-bf47-6288cc110393.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-4c732acb-a2ca-3b37-bf47-6288cc110393",
- "owner": {
- "substance": {
- "uuid": "FCSV-06c1d24b-426b-39ec-8047-700808302325"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.209,
- "errQualifier": "sd",
- "errorValue": 0.04
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.272,
- "errQualifier": "sd",
- "errorValue": 0.003
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 525.8,
- "errQualifier": "sd",
- "errorValue": 0.28
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4c7ff8ab-d24e-3af5-bcf3-900f74cac47f.json b/test/data/enm/study-FCSV-4c7ff8ab-d24e-3af5-bcf3-900f74cac47f.json
deleted file mode 100644
index c7fd592..0000000
--- a/test/data/enm/study-FCSV-4c7ff8ab-d24e-3af5-bcf3-900f74cac47f.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-4c7ff8ab-d24e-3af5-bcf3-900f74cac47f",
- "owner": {
- "substance": {
- "uuid": "FCSV-8619e6db-2c01-389e-b05b-e75273d18359"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.244,
- "errQualifier": "sd",
- "errorValue": 0.001
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.367,
- "errQualifier": "sd",
- "errorValue": 0.064
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 526.2,
- "errQualifier": "sd",
- "errorValue": 0.17
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4cc491de-ff4c-3a05-aae9-079c674367e1.json b/test/data/enm/study-FCSV-4cc491de-ff4c-3a05-aae9-079c674367e1.json
deleted file mode 100644
index 0b15856..0000000
--- a/test/data/enm/study-FCSV-4cc491de-ff4c-3a05-aae9-079c674367e1.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-4cc491de-ff4c-3a05-aae9-079c674367e1",
- "owner": {
- "substance": {
- "uuid": "FCSV-a4df7f03-50e1-387c-b0b7-2ce62ed03a8c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4cf4c204-12ee-3655-859e-cbdec74f3178.json b/test/data/enm/study-FCSV-4cf4c204-12ee-3655-859e-cbdec74f3178.json
deleted file mode 100644
index bcf14ba..0000000
--- a/test/data/enm/study-FCSV-4cf4c204-12ee-3655-859e-cbdec74f3178.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-4cf4c204-12ee-3655-859e-cbdec74f3178",
- "owner": {
- "substance": {
- "uuid": "FCSV-9964d099-d8aa-3a89-863c-d69fc921bee2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Thiolated L-phenylalanine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4cf92365-0c15-3538-891e-2a694c614a5a.json b/test/data/enm/study-FCSV-4cf92365-0c15-3538-891e-2a694c614a5a.json
deleted file mode 100644
index d6d8cb7..0000000
--- a/test/data/enm/study-FCSV-4cf92365-0c15-3538-891e-2a694c614a5a.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-4cf92365-0c15-3538-891e-2a694c614a5a",
- "owner": {
- "substance": {
- "uuid": "FCSV-9a56b1e5-2e22-31c4-b979-e8e9fee728c6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.153,
- "errQualifier": "sd",
- "errorValue": 0.021
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.252,
- "errQualifier": "sd",
- "errorValue": 0.065
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4d15b7e5-51d2-37d8-8a25-2b65f327cc3e.json b/test/data/enm/study-FCSV-4d15b7e5-51d2-37d8-8a25-2b65f327cc3e.json
deleted file mode 100644
index a82854f..0000000
--- a/test/data/enm/study-FCSV-4d15b7e5-51d2-37d8-8a25-2b65f327cc3e.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-4d15b7e5-51d2-37d8-8a25-2b65f327cc3e",
- "owner": {
- "substance": {
- "uuid": "FCSV-fb5e6048-8ee1-351d-915b-d1669681357e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4d652b9d-1244-3fde-bc04-d6c0c1c928f4.json b/test/data/enm/study-FCSV-4d652b9d-1244-3fde-bc04-d6c0c1c928f4.json
deleted file mode 100644
index 0a5dc4f..0000000
--- a/test/data/enm/study-FCSV-4d652b9d-1244-3fde-bc04-d6c0c1c928f4.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-4d652b9d-1244-3fde-bc04-d6c0c1c928f4",
- "owner": {
- "substance": {
- "uuid": "FCSV-7087aac7-6f1d-320f-bfde-5897fe91af64"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -25.65,
- "errQualifier": "sd",
- "errorValue": 3.65
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -8.65,
- "errQualifier": "sd",
- "errorValue": 0.92
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4d69a24a-2e6a-3fa9-bc53-fcc67f2370db.json b/test/data/enm/study-FCSV-4d69a24a-2e6a-3fa9-bc53-fcc67f2370db.json
deleted file mode 100644
index 2932da5..0000000
--- a/test/data/enm/study-FCSV-4d69a24a-2e6a-3fa9-bc53-fcc67f2370db.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-4d69a24a-2e6a-3fa9-bc53-fcc67f2370db",
- "owner": {
- "substance": {
- "uuid": "FCSV-99734121-3347-3d4e-9bc6-67956450b140"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.03,
- "errQualifier": "sd",
- "errorValue": 0.021
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -5.051,
- "errQualifier": "std",
- "errorValue": 1.013
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4d71d712-6556-3d9a-b334-d1a684d8b0f0.json b/test/data/enm/study-FCSV-4d71d712-6556-3d9a-b334-d1a684d8b0f0.json
deleted file mode 100644
index 3cf34f4..0000000
--- a/test/data/enm/study-FCSV-4d71d712-6556-3d9a-b334-d1a684d8b0f0.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-4d71d712-6556-3d9a-b334-d1a684d8b0f0",
- "owner": {
- "substance": {
- "uuid": "FCSV-c4fe20ba-de05-36c2-9842-5433ce33bd72"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- },
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- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.194,
- "errQualifier": "sd",
- "errorValue": 0.017
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.235,
- "errQualifier": "sd",
- "errorValue": 0.01
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4d92b0d2-e5cc-3e46-925e-c278bd406af1.json b/test/data/enm/study-FCSV-4d92b0d2-e5cc-3e46-925e-c278bd406af1.json
deleted file mode 100644
index b94702a..0000000
--- a/test/data/enm/study-FCSV-4d92b0d2-e5cc-3e46-925e-c278bd406af1.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-4d92b0d2-e5cc-3e46-925e-c278bd406af1",
- "owner": {
- "substance": {
- "uuid": "FCSV-c975883b-640e-38a6-aabe-7596e3abcd95"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
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- },
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4dae550c-6f78-38f0-8e55-6040ae7502f1.json b/test/data/enm/study-FCSV-4dae550c-6f78-38f0-8e55-6040ae7502f1.json
deleted file mode 100644
index 5ed8fa2..0000000
--- a/test/data/enm/study-FCSV-4dae550c-6f78-38f0-8e55-6040ae7502f1.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-4dae550c-6f78-38f0-8e55-6040ae7502f1",
- "owner": {
- "substance": {
- "uuid": "FCSV-ceed5aa6-a62e-3202-9bcf-702a94d34785"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4db1f8e0-af29-3315-98ce-8a3c0753a306.json b/test/data/enm/study-FCSV-4db1f8e0-af29-3315-98ce-8a3c0753a306.json
deleted file mode 100644
index 9876515..0000000
--- a/test/data/enm/study-FCSV-4db1f8e0-af29-3315-98ce-8a3c0753a306.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-4db1f8e0-af29-3315-98ce-8a3c0753a306",
- "owner": {
- "substance": {
- "uuid": "FCSV-63da0f0e-51b8-3c56-b5d3-d4e0e9fb06a6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Core size",
- "conditions": {
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 31.6,
- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Density",
- "conditions": {
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
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- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4dbd0199-6fd8-359e-9766-1e542b3816a5.json b/test/data/enm/study-FCSV-4dbd0199-6fd8-359e-9766-1e542b3816a5.json
deleted file mode 100644
index 07019dc..0000000
--- a/test/data/enm/study-FCSV-4dbd0199-6fd8-359e-9766-1e542b3816a5.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-4dbd0199-6fd8-359e-9766-1e542b3816a5",
- "owner": {
- "substance": {
- "uuid": "FCSV-7c56798c-f7cd-37d3-8a67-ead57f36db31"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
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- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- "effects": [
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- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Mercaptoacetic acid"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4dc415c8-947c-39da-8a86-98fd6cb4f765.json b/test/data/enm/study-FCSV-4dc415c8-947c-39da-8a86-98fd6cb4f765.json
deleted file mode 100644
index ce817a5..0000000
--- a/test/data/enm/study-FCSV-4dc415c8-947c-39da-8a86-98fd6cb4f765.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-4dc415c8-947c-39da-8a86-98fd6cb4f765",
- "owner": {
- "substance": {
- "uuid": "FCSV-9df9ed76-5f94-3ecb-b661-a56e168a71bf"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.00049,
- "errQualifier": "sd",
- "errorValue": 0.00085
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -10.994,
- "errQualifier": "std",
- "errorValue": 2.499
- }
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- ]
-}
diff --git a/test/data/enm/study-FCSV-4e2e1d44-7f63-34c1-8e9d-3dd52ff5e103.json b/test/data/enm/study-FCSV-4e2e1d44-7f63-34c1-8e9d-3dd52ff5e103.json
deleted file mode 100644
index 6c5cd3f..0000000
--- a/test/data/enm/study-FCSV-4e2e1d44-7f63-34c1-8e9d-3dd52ff5e103.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-4e2e1d44-7f63-34c1-8e9d-3dd52ff5e103",
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.458,
- "errQualifier": "sd",
- "errorValue": 0.013
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.526,
- "errQualifier": "sd",
- "errorValue": 0.01
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
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- "loQualifier": "mean",
- "loValue": 526.28,
- "errQualifier": "sd",
- "errorValue": 1.35
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4e40e840-836f-3280-bfd0-d22a11220969.json b/test/data/enm/study-FCSV-4e40e840-836f-3280-bfd0-d22a11220969.json
deleted file mode 100644
index 25f50fc..0000000
--- a/test/data/enm/study-FCSV-4e40e840-836f-3280-bfd0-d22a11220969.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-4e40e840-836f-3280-bfd0-d22a11220969",
- "owner": {
- "substance": {
- "uuid": "FCSV-8a45dec8-a551-33cc-a7ac-7750d9f30389"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 59.3,
- "errQualifier": "sd",
- "errorValue": 6.4
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4e43c74f-1906-3aee-8892-78a122917dad.json b/test/data/enm/study-FCSV-4e43c74f-1906-3aee-8892-78a122917dad.json
deleted file mode 100644
index 96d25f2..0000000
--- a/test/data/enm/study-FCSV-4e43c74f-1906-3aee-8892-78a122917dad.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-4e43c74f-1906-3aee-8892-78a122917dad",
- "owner": {
- "substance": {
- "uuid": "FCSV-ded649fa-97e1-3ec6-bb3d-623506389ee0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 2.28,
- "errQualifier": "sd",
- "errorValue": 1.099
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4e5886f9-8c15-3930-a61f-12dd8755edf5.json b/test/data/enm/study-FCSV-4e5886f9-8c15-3930-a61f-12dd8755edf5.json
deleted file mode 100644
index 304a8f4..0000000
--- a/test/data/enm/study-FCSV-4e5886f9-8c15-3930-a61f-12dd8755edf5.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-4e5886f9-8c15-3930-a61f-12dd8755edf5",
- "owner": {
- "substance": {
- "uuid": "FCSV-b38f2b71-aa2d-3d72-af88-166a60bedee2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -8.96,
- "errQualifier": "sd",
- "errorValue": 2.33
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -6.63,
- "errQualifier": "sd",
- "errorValue": 1.46
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4edb9fbe-fd99-319c-aff9-646f6e033200.json b/test/data/enm/study-FCSV-4edb9fbe-fd99-319c-aff9-646f6e033200.json
deleted file mode 100644
index 16544c7..0000000
--- a/test/data/enm/study-FCSV-4edb9fbe-fd99-319c-aff9-646f6e033200.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-4edb9fbe-fd99-319c-aff9-646f6e033200",
- "owner": {
- "substance": {
- "uuid": "FCSV-f3d54c07-7dd4-3124-b5bf-341eb9eb4e82"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 244.228,
- "errQualifier": "sd",
- "errorValue": 1.238
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 1,
- "errQualifier": "sem",
- "errorValue": 0.038
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4f3d8f57-ae4d-30f8-8ec9-4f9b6b03170a.json b/test/data/enm/study-FCSV-4f3d8f57-ae4d-30f8-8ec9-4f9b6b03170a.json
deleted file mode 100644
index e5d2592..0000000
--- a/test/data/enm/study-FCSV-4f3d8f57-ae4d-30f8-8ec9-4f9b6b03170a.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-4f3d8f57-ae4d-30f8-8ec9-4f9b6b03170a",
- "owner": {
- "substance": {
- "uuid": "FCSV-07629748-9b8e-381b-a4e6-79b495404e02"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Ag]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4f476513-74bf-3baa-900d-54aeb9c06314.json b/test/data/enm/study-FCSV-4f476513-74bf-3baa-900d-54aeb9c06314.json
deleted file mode 100644
index cfa015f..0000000
--- a/test/data/enm/study-FCSV-4f476513-74bf-3baa-900d-54aeb9c06314.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-4f476513-74bf-3baa-900d-54aeb9c06314",
- "owner": {
- "substance": {
- "uuid": "FCSV-0542c513-7015-3169-a1c1-e00f811a7ba0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4f4d4ebe-5b62-36f4-a525-d94e5746a543.json b/test/data/enm/study-FCSV-4f4d4ebe-5b62-36f4-a525-d94e5746a543.json
deleted file mode 100644
index f4571f2..0000000
--- a/test/data/enm/study-FCSV-4f4d4ebe-5b62-36f4-a525-d94e5746a543.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-4f4d4ebe-5b62-36f4-a525-d94e5746a543",
- "owner": {
- "substance": {
- "uuid": "FCSV-ded649fa-97e1-3ec6-bb3d-623506389ee0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -38.62,
- "errQualifier": "sd",
- "errorValue": 1.02
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -9.6,
- "errQualifier": "sd",
- "errorValue": 1.72
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-4fa8ccfb-20ba-3b6e-9174-627933ae8668.json b/test/data/enm/study-FCSV-4fa8ccfb-20ba-3b6e-9174-627933ae8668.json
deleted file mode 100644
index 2fe73aa..0000000
--- a/test/data/enm/study-FCSV-4fa8ccfb-20ba-3b6e-9174-627933ae8668.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-4fa8ccfb-20ba-3b6e-9174-627933ae8668",
- "owner": {
- "substance": {
- "uuid": "FCSV-770a2d39-1509-3c93-b28f-1d3e345de450"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5010cfe8-fb56-37c7-ae04-a107a212461c.json b/test/data/enm/study-FCSV-5010cfe8-fb56-37c7-ae04-a107a212461c.json
deleted file mode 100644
index ad34e35..0000000
--- a/test/data/enm/study-FCSV-5010cfe8-fb56-37c7-ae04-a107a212461c.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-5010cfe8-fb56-37c7-ae04-a107a212461c",
- "owner": {
- "substance": {
- "uuid": "FCSV-1c9a58a0-cd91-3636-8f7c-4fd886f8593a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.005,
- "errQualifier": "sd",
- "errorValue": 0.00032
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -7.551,
- "errQualifier": "std",
- "errorValue": 0.086
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5019258b-54d8-3b13-8ecc-94ceff68f456.json b/test/data/enm/study-FCSV-5019258b-54d8-3b13-8ecc-94ceff68f456.json
deleted file mode 100644
index bc96bc8..0000000
--- a/test/data/enm/study-FCSV-5019258b-54d8-3b13-8ecc-94ceff68f456.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-5019258b-54d8-3b13-8ecc-94ceff68f456",
- "owner": {
- "substance": {
- "uuid": "FCSV-6046fc9f-3c73-3215-97e2-4ddcf85f41da"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Methoxy-poly(ethylene glycol)-thiol (5kDa)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5045ca3a-1e67-3fdf-bc5d-b04ea25e2e43.json b/test/data/enm/study-FCSV-5045ca3a-1e67-3fdf-bc5d-b04ea25e2e43.json
deleted file mode 100644
index 53789aa..0000000
--- a/test/data/enm/study-FCSV-5045ca3a-1e67-3fdf-bc5d-b04ea25e2e43.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-5045ca3a-1e67-3fdf-bc5d-b04ea25e2e43",
- "owner": {
- "substance": {
- "uuid": "FCSV-0fe5f223-9c02-363c-a23c-70f1f36ffbec"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.007,
- "errQualifier": "sd",
- "errorValue": 0.004
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -7.138,
- "errQualifier": "std",
- "errorValue": 0.84
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-50571e1c-213d-3802-beda-6cfa495d0c9d.json b/test/data/enm/study-FCSV-50571e1c-213d-3802-beda-6cfa495d0c9d.json
deleted file mode 100644
index 14390c1..0000000
--- a/test/data/enm/study-FCSV-50571e1c-213d-3802-beda-6cfa495d0c9d.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-50571e1c-213d-3802-beda-6cfa495d0c9d",
- "owner": {
- "substance": {
- "uuid": "FCSV-b38f2b71-aa2d-3d72-af88-166a60bedee2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 238.252,
- "errQualifier": "sd",
- "errorValue": 10.092
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.062
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-506c8e75-1a9e-39c7-854f-0cfa89cfedcd.json b/test/data/enm/study-FCSV-506c8e75-1a9e-39c7-854f-0cfa89cfedcd.json
deleted file mode 100644
index 3a71bc1..0000000
--- a/test/data/enm/study-FCSV-506c8e75-1a9e-39c7-854f-0cfa89cfedcd.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-506c8e75-1a9e-39c7-854f-0cfa89cfedcd",
- "owner": {
- "substance": {
- "uuid": "FCSV-130b04ab-86e6-38d6-9276-e2db1b4dcffb"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-512d1fe3-798e-3d21-b564-32e0093650f7.json b/test/data/enm/study-FCSV-512d1fe3-798e-3d21-b564-32e0093650f7.json
deleted file mode 100644
index 3d7a57c..0000000
--- a/test/data/enm/study-FCSV-512d1fe3-798e-3d21-b564-32e0093650f7.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-512d1fe3-798e-3d21-b564-32e0093650f7",
- "owner": {
- "substance": {
- "uuid": "FCSV-a7f3867d-85fc-33ab-8167-66b73c818f31"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "ATOMIC COMPOSITION",
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-514c24b5-1484-3373-ab10-92ceede954a6.json b/test/data/enm/study-FCSV-514c24b5-1484-3373-ab10-92ceede954a6.json
deleted file mode 100644
index f4f22c0..0000000
--- a/test/data/enm/study-FCSV-514c24b5-1484-3373-ab10-92ceede954a6.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-514c24b5-1484-3373-ab10-92ceede954a6",
- "owner": {
- "substance": {
- "uuid": "FCSV-a4df7f03-50e1-387c-b0b7-2ce62ed03a8c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 3.557,
- "errQualifier": "sd",
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- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-515c36df-9c6a-321f-8feb-3e1cb25d7c10.json b/test/data/enm/study-FCSV-515c36df-9c6a-321f-8feb-3e1cb25d7c10.json
deleted file mode 100644
index aa5f8af..0000000
--- a/test/data/enm/study-FCSV-515c36df-9c6a-321f-8feb-3e1cb25d7c10.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-515c36df-9c6a-321f-8feb-3e1cb25d7c10",
- "owner": {
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 912.119,
- "errQualifier": "sd",
- "errorValue": 27.894
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.04
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5189ea2d-0c6e-3e4d-8738-c4089b8d27f5.json b/test/data/enm/study-FCSV-5189ea2d-0c6e-3e4d-8738-c4089b8d27f5.json
deleted file mode 100644
index eb8dc22..0000000
--- a/test/data/enm/study-FCSV-5189ea2d-0c6e-3e4d-8738-c4089b8d27f5.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-5189ea2d-0c6e-3e4d-8738-c4089b8d27f5",
- "owner": {
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- "uuid": "FCSV-bc2c755f-9eee-30e3-9e98-1fbb2397c980"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.061,
- "errQualifier": "sd",
- "errorValue": 0.007
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.161,
- "errQualifier": "sd",
- "errorValue": 0.009
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-51ae634a-4e91-3e7f-a372-9a917b8b2286.json b/test/data/enm/study-FCSV-51ae634a-4e91-3e7f-a372-9a917b8b2286.json
deleted file mode 100644
index 573ff94..0000000
--- a/test/data/enm/study-FCSV-51ae634a-4e91-3e7f-a372-9a917b8b2286.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-51ae634a-4e91-3e7f-a372-9a917b8b2286",
- "owner": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.587,
- "errQualifier": "sd",
- "errorValue": 0.319
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-523c5929-3404-3a5b-943d-983ad9dd1f8c.json b/test/data/enm/study-FCSV-523c5929-3404-3a5b-943d-983ad9dd1f8c.json
deleted file mode 100644
index d389be0..0000000
--- a/test/data/enm/study-FCSV-523c5929-3404-3a5b-943d-983ad9dd1f8c.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-523c5929-3404-3a5b-943d-983ad9dd1f8c",
- "owner": {
- "substance": {
- "uuid": "FCSV-31bd6c7b-3247-3db9-93b6-59e0d3ecefa9"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 38.4,
- "errQualifier": "sd",
- "errorValue": 2.5
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 10.5
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 108
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-52b0569f-0752-3954-988f-b71e5765cfb1.json b/test/data/enm/study-FCSV-52b0569f-0752-3954-988f-b71e5765cfb1.json
deleted file mode 100644
index 0687d39..0000000
--- a/test/data/enm/study-FCSV-52b0569f-0752-3954-988f-b71e5765cfb1.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-52b0569f-0752-3954-988f-b71e5765cfb1",
- "owner": {
- "substance": {
- "uuid": "FCSV-c4e9df58-f3fb-34f6-9c56-0626c12fb1b7"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-52b3235a-2f86-3af8-9e21-d8017d69a74e.json b/test/data/enm/study-FCSV-52b3235a-2f86-3af8-9e21-d8017d69a74e.json
deleted file mode 100644
index 6cc17a3..0000000
--- a/test/data/enm/study-FCSV-52b3235a-2f86-3af8-9e21-d8017d69a74e.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-52b3235a-2f86-3af8-9e21-d8017d69a74e",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f5cd32a-3350-300b-91d0-87000ee5d7ee"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.399,
- "errQualifier": "sd",
- "errorValue": 0.136
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.215,
- "errQualifier": "sd",
- "errorValue": 0.014
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-52e3fd47-0e1f-3186-8f1e-aa0d3cdfd7d1.json b/test/data/enm/study-FCSV-52e3fd47-0e1f-3186-8f1e-aa0d3cdfd7d1.json
deleted file mode 100644
index 3c2e0d1..0000000
--- a/test/data/enm/study-FCSV-52e3fd47-0e1f-3186-8f1e-aa0d3cdfd7d1.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-52e3fd47-0e1f-3186-8f1e-aa0d3cdfd7d1",
- "owner": {
- "substance": {
- "uuid": "FCSV-7ad8c003-d0ee-3ea6-9374-b6e4d2f33401"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 892.402,
- "errQualifier": "sd",
- "errorValue": 103.346
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.041
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-52f76c20-151c-363a-9d5f-835c2cf10bea.json b/test/data/enm/study-FCSV-52f76c20-151c-363a-9d5f-835c2cf10bea.json
deleted file mode 100644
index 2703ac1..0000000
--- a/test/data/enm/study-FCSV-52f76c20-151c-363a-9d5f-835c2cf10bea.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-52f76c20-151c-363a-9d5f-835c2cf10bea",
- "owner": {
- "substance": {
- "uuid": "FCSV-0fe5f223-9c02-363c-a23c-70f1f36ffbec"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.144,
- "errQualifier": "sd",
- "errorValue": 0.04
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.154,
- "errQualifier": "sd",
- "errorValue": 0.025
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5319ce1b-b956-34af-a042-fc00e32a3568.json b/test/data/enm/study-FCSV-5319ce1b-b956-34af-a042-fc00e32a3568.json
deleted file mode 100644
index 9db320c..0000000
--- a/test/data/enm/study-FCSV-5319ce1b-b956-34af-a042-fc00e32a3568.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-5319ce1b-b956-34af-a042-fc00e32a3568",
- "owner": {
- "substance": {
- "uuid": "FCSV-4026a85b-f254-3d35-bd77-c634d38e4a22"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.024,
- "errQualifier": "sd",
- "errorValue": 0.009
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -5.381,
- "errQualifier": "std",
- "errorValue": 0.549
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5330fa5f-0e9f-3f9c-8996-ef59898a95a8.json b/test/data/enm/study-FCSV-5330fa5f-0e9f-3f9c-8996-ef59898a95a8.json
deleted file mode 100644
index a6452e1..0000000
--- a/test/data/enm/study-FCSV-5330fa5f-0e9f-3f9c-8996-ef59898a95a8.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-5330fa5f-0e9f-3f9c-8996-ef59898a95a8",
- "owner": {
- "substance": {
- "uuid": "FCSV-ed95bb69-9fa7-3a4a-b4a4-32dd947d4d1a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 27.18,
- "errQualifier": "sd",
- "errorValue": 6.15
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 127.34,
- "errQualifier": "sd",
- "errorValue": 11.98
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 22.97,
- "errQualifier": "sd",
- "errorValue": 1.28
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 145.01,
- "errQualifier": "sd",
- "errorValue": 42.34
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 30.92,
- "errQualifier": "sd",
- "errorValue": 0.19
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 97.42,
- "errQualifier": "sd",
- "errorValue": 8.61
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 30.92,
- "errQualifier": "sd",
- "errorValue": 12.46
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 139.75,
- "errQualifier": "sd",
- "errorValue": 13.22
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-534b4ea7-c129-3663-a41f-3f3cf7b0d0e1.json b/test/data/enm/study-FCSV-534b4ea7-c129-3663-a41f-3f3cf7b0d0e1.json
deleted file mode 100644
index b19febd..0000000
--- a/test/data/enm/study-FCSV-534b4ea7-c129-3663-a41f-3f3cf7b0d0e1.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-534b4ea7-c129-3663-a41f-3f3cf7b0d0e1",
- "owner": {
- "substance": {
- "uuid": "FCSV-bfa499a9-7d1a-34da-bccf-4fc30c65f03d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -21.32,
- "errQualifier": "sd",
- "errorValue": 4.84
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -5.26,
- "errQualifier": "sd",
- "errorValue": 0.23
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5367211c-e735-318f-9cf9-5c7cabaffc85.json b/test/data/enm/study-FCSV-5367211c-e735-318f-9cf9-5c7cabaffc85.json
deleted file mode 100644
index befaa41..0000000
--- a/test/data/enm/study-FCSV-5367211c-e735-318f-9cf9-5c7cabaffc85.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-5367211c-e735-318f-9cf9-5c7cabaffc85",
- "owner": {
- "substance": {
- "uuid": "FCSV-770a2d39-1509-3c93-b28f-1d3e345de450"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Thiolated amino-poly(ethylene glycol) (methoxy terminated) (5kDa)*"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-537e3822-d127-3fba-9d50-a735508381aa.json b/test/data/enm/study-FCSV-537e3822-d127-3fba-9d50-a735508381aa.json
deleted file mode 100644
index 596005b..0000000
--- a/test/data/enm/study-FCSV-537e3822-d127-3fba-9d50-a735508381aa.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-537e3822-d127-3fba-9d50-a735508381aa",
- "owner": {
- "substance": {
- "uuid": "FCSV-7ad8c003-d0ee-3ea6-9374-b6e4d2f33401"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 75.37,
- "errQualifier": "sd",
- "errorValue": 6.04
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 95.18,
- "errQualifier": "sd",
- "errorValue": 1.33
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 64.12,
- "errQualifier": "sd",
- "errorValue": 12.97
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 93.72,
- "errQualifier": "sd",
- "errorValue": 1.75
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 80.33,
- "errQualifier": "sd",
- "errorValue": 13.97
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 86.87,
- "errQualifier": "sd",
- "errorValue": 2.51
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 80.33,
- "errQualifier": "sd",
- "errorValue": 5.19
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 102.41,
- "errQualifier": "sd",
- "errorValue": 2.84
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-53927166-1643-3654-8512-9521aa7f6011.json b/test/data/enm/study-FCSV-53927166-1643-3654-8512-9521aa7f6011.json
deleted file mode 100644
index b2fe862..0000000
--- a/test/data/enm/study-FCSV-53927166-1643-3654-8512-9521aa7f6011.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-53927166-1643-3654-8512-9521aa7f6011",
- "owner": {
- "substance": {
- "uuid": "FCSV-064f1803-3b9e-3f44-a5f6-60b1f573830c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 255.11,
- "errQualifier": "sd",
- "errorValue": 19.102
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.026
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-53ae3b66-3ba0-3982-a6d5-6af0b060423f.json b/test/data/enm/study-FCSV-53ae3b66-3ba0-3982-a6d5-6af0b060423f.json
deleted file mode 100644
index fb76e8e..0000000
--- a/test/data/enm/study-FCSV-53ae3b66-3ba0-3982-a6d5-6af0b060423f.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-53ae3b66-3ba0-3982-a6d5-6af0b060423f",
- "owner": {
- "substance": {
- "uuid": "FCSV-2a853f39-424f-3a63-91f3-1300f85ebe73"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-53ffbc53-095a-326b-af01-a12b8b4da9af.json b/test/data/enm/study-FCSV-53ffbc53-095a-326b-af01-a12b8b4da9af.json
deleted file mode 100644
index 19917fb..0000000
--- a/test/data/enm/study-FCSV-53ffbc53-095a-326b-af01-a12b8b4da9af.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-53ffbc53-095a-326b-af01-a12b8b4da9af",
- "owner": {
- "substance": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
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- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5443594e-8efe-3ab3-a7d2-f4746a17f6d2.json b/test/data/enm/study-FCSV-5443594e-8efe-3ab3-a7d2-f4746a17f6d2.json
deleted file mode 100644
index 91e84ac..0000000
--- a/test/data/enm/study-FCSV-5443594e-8efe-3ab3-a7d2-f4746a17f6d2.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-5443594e-8efe-3ab3-a7d2-f4746a17f6d2",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 90.22,
- "errQualifier": "sd",
- "errorValue": 2.36
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 88.32,
- "errQualifier": "sd",
- "errorValue": 2.97
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 88.48,
- "errQualifier": "sd",
- "errorValue": 2.58
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 85.31,
- "errQualifier": "sd",
- "errorValue": 4.86
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 94.52,
- "errQualifier": "sd",
- "errorValue": 4.77
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 79.33,
- "errQualifier": "sd",
- "errorValue": 8.5
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 94.52,
- "errQualifier": "sd",
- "errorValue": 2.18
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 92.46,
- "errQualifier": "sd",
- "errorValue": 0.58
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-545f9136-d400-336b-a89d-50be9b392181.json b/test/data/enm/study-FCSV-545f9136-d400-336b-a89d-50be9b392181.json
deleted file mode 100644
index 6634584..0000000
--- a/test/data/enm/study-FCSV-545f9136-d400-336b-a89d-50be9b392181.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-545f9136-d400-336b-a89d-50be9b392181",
- "owner": {
- "substance": {
- "uuid": "FCSV-e5b47d9a-ba9d-3310-8f92-72aad8f0364d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
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- "testmat_form": null
- },
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- "ELEMENT_OR_GROUP": null,
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- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Carboxymethyl-poly(ethylene glycol)-thiol (5kDa)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5462b02b-a422-3611-8948-a5137e29b55b.json b/test/data/enm/study-FCSV-5462b02b-a422-3611-8948-a5137e29b55b.json
deleted file mode 100644
index f3bdc2b..0000000
--- a/test/data/enm/study-FCSV-5462b02b-a422-3611-8948-a5137e29b55b.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-5462b02b-a422-3611-8948-a5137e29b55b",
- "owner": {
- "substance": {
- "uuid": "FCSV-2ed7ebf8-d11d-3f39-8f05-b0132ec4d7e0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.045,
- "errQualifier": "sd",
- "errorValue": 0.018
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.084,
- "errQualifier": "sd",
- "errorValue": 0.022
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-54c38205-ea81-3890-aa84-e67cf3d2396a.json b/test/data/enm/study-FCSV-54c38205-ea81-3890-aa84-e67cf3d2396a.json
deleted file mode 100644
index 2315007..0000000
--- a/test/data/enm/study-FCSV-54c38205-ea81-3890-aa84-e67cf3d2396a.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-54c38205-ea81-3890-aa84-e67cf3d2396a",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc488cf3-986d-34cf-9ee7-12f98873dfe4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-555f8e31-ba21-3ba8-bcb2-50c5add11dbd.json b/test/data/enm/study-FCSV-555f8e31-ba21-3ba8-bcb2-50c5add11dbd.json
deleted file mode 100644
index df1d6a7..0000000
--- a/test/data/enm/study-FCSV-555f8e31-ba21-3ba8-bcb2-50c5add11dbd.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-555f8e31-ba21-3ba8-bcb2-50c5add11dbd",
- "owner": {
- "substance": {
- "uuid": "FCSV-99734121-3347-3d4e-9bc6-67956450b140"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
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- "effects": [
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- "endpoint": "FUNCTIONAL GROUP",
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- "DESCRIPTION": null,
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- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "alpha-Lipoic acid"
- }
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- ]
-}
diff --git a/test/data/enm/study-FCSV-556d0286-25c8-332b-b639-8f5dd6d1cf45.json b/test/data/enm/study-FCSV-556d0286-25c8-332b-b639-8f5dd6d1cf45.json
deleted file mode 100644
index 6eb4f5f..0000000
--- a/test/data/enm/study-FCSV-556d0286-25c8-332b-b639-8f5dd6d1cf45.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-556d0286-25c8-332b-b639-8f5dd6d1cf45",
- "owner": {
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
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- "interpretation": {
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- },
- "effects": [
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 22.74,
- "errQualifier": "sd",
- "errorValue": 5.11
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 51.52,
- "errQualifier": "sd",
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- }
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- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
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- "Remark": null,
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- },
- "result": {
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- "loValue": 23.89,
- "errQualifier": "sd",
- "errorValue": 21.97
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 27.83,
- "errQualifier": "sd",
- "errorValue": 4.61
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 35.93,
- "errQualifier": "sd",
- "errorValue": 9.65
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
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- "endpoint": "Intensity Mean Hydrodynamic Diameter",
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- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 51.37,
- "errQualifier": "sd",
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diff --git a/test/data/enm/study-FCSV-55d79ed2-4e3f-3c02-bf0e-260e92ca6a5e.json b/test/data/enm/study-FCSV-55d79ed2-4e3f-3c02-bf0e-260e92ca6a5e.json
deleted file mode 100644
index 3998c27..0000000
--- a/test/data/enm/study-FCSV-55d79ed2-4e3f-3c02-bf0e-260e92ca6a5e.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-55d79ed2-4e3f-3c02-bf0e-260e92ca6a5e",
- "owner": {
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- "uuid": "FCSV-ee07f574-0b80-31db-b1f2-535f6d6626b0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_value": null
- },
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- },
- "effects": [
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- "endpoint": "Spectral counts",
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-55ea6ddb-4efd-346f-989b-2693ff260aa1.json b/test/data/enm/study-FCSV-55ea6ddb-4efd-346f-989b-2693ff260aa1.json
deleted file mode 100644
index aa981fb..0000000
--- a/test/data/enm/study-FCSV-55ea6ddb-4efd-346f-989b-2693ff260aa1.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-55ea6ddb-4efd-346f-989b-2693ff260aa1",
- "owner": {
- "substance": {
- "uuid": "FCSV-0d5c0fc7-de56-3507-b651-1c91bf030465"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-560416aa-2c78-3a6f-a9bf-0eaa447de64e.json b/test/data/enm/study-FCSV-560416aa-2c78-3a6f-a9bf-0eaa447de64e.json
deleted file mode 100644
index 30632ca..0000000
--- a/test/data/enm/study-FCSV-560416aa-2c78-3a6f-a9bf-0eaa447de64e.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-560416aa-2c78-3a6f-a9bf-0eaa447de64e",
- "owner": {
- "substance": {
- "uuid": "FCSV-8e1a76df-a12d-3254-ae6b-28e20153ef59"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": 24.14,
- "errQualifier": "sd",
- "errorValue": 2.41
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -8.35,
- "errQualifier": "sd",
- "errorValue": 0.57
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-560bae11-245f-34da-9129-ee43eb809736.json b/test/data/enm/study-FCSV-560bae11-245f-34da-9129-ee43eb809736.json
deleted file mode 100644
index b6e3299..0000000
--- a/test/data/enm/study-FCSV-560bae11-245f-34da-9129-ee43eb809736.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-560bae11-245f-34da-9129-ee43eb809736",
- "owner": {
- "substance": {
- "uuid": "FCSV-6aea0743-7abb-3448-85ce-961b67fca97f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 59.3,
- "errQualifier": "sd",
- "errorValue": 6.4
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-56369565-cf0c-36fd-aff9-a1829e42dfbd.json b/test/data/enm/study-FCSV-56369565-cf0c-36fd-aff9-a1829e42dfbd.json
deleted file mode 100644
index 6e5eb44..0000000
--- a/test/data/enm/study-FCSV-56369565-cf0c-36fd-aff9-a1829e42dfbd.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-56369565-cf0c-36fd-aff9-a1829e42dfbd",
- "owner": {
- "substance": {
- "uuid": "FCSV-74492618-7ff6-39c9-b396-8d7465109083"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-56cf7f92-da2e-3318-b87a-a0e6157e5808.json b/test/data/enm/study-FCSV-56cf7f92-da2e-3318-b87a-a0e6157e5808.json
deleted file mode 100644
index b66c269..0000000
--- a/test/data/enm/study-FCSV-56cf7f92-da2e-3318-b87a-a0e6157e5808.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-56cf7f92-da2e-3318-b87a-a0e6157e5808",
- "owner": {
- "substance": {
- "uuid": "FCSV-63da0f0e-51b8-3c56-b5d3-d4e0e9fb06a6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-57209db4-63c9-32bc-9b69-d14dd76c6421.json b/test/data/enm/study-FCSV-57209db4-63c9-32bc-9b69-d14dd76c6421.json
deleted file mode 100644
index 5f90c57..0000000
--- a/test/data/enm/study-FCSV-57209db4-63c9-32bc-9b69-d14dd76c6421.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-57209db4-63c9-32bc-9b69-d14dd76c6421",
- "owner": {
- "substance": {
- "uuid": "FCSV-0fe5f223-9c02-363c-a23c-70f1f36ffbec"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Peptide sequence 'CALNN'"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-57d0b9a5-124a-3d4b-a63e-84614edb8964.json b/test/data/enm/study-FCSV-57d0b9a5-124a-3d4b-a63e-84614edb8964.json
deleted file mode 100644
index 84ca401..0000000
--- a/test/data/enm/study-FCSV-57d0b9a5-124a-3d4b-a63e-84614edb8964.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-57d0b9a5-124a-3d4b-a63e-84614edb8964",
- "owner": {
- "substance": {
- "uuid": "FCSV-cd7105f2-f630-360e-b8dc-ff42b18bb421"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.249,
- "errQualifier": "sd",
- "errorValue": 0.06
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.367,
- "errQualifier": "sd",
- "errorValue": 0.061
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-580e5898-73c7-3e1b-811c-faa8cccd7b51.json b/test/data/enm/study-FCSV-580e5898-73c7-3e1b-811c-faa8cccd7b51.json
deleted file mode 100644
index 5b1d603..0000000
--- a/test/data/enm/study-FCSV-580e5898-73c7-3e1b-811c-faa8cccd7b51.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-580e5898-73c7-3e1b-811c-faa8cccd7b51",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc77c03d-4e75-3fab-bb3d-17b983663819"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 255.443,
- "errQualifier": "sd",
- "errorValue": 10.239
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.026
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-581de4bc-a29b-3276-afc7-70c1c86a85ec.json b/test/data/enm/study-FCSV-581de4bc-a29b-3276-afc7-70c1c86a85ec.json
deleted file mode 100644
index 58922f1..0000000
--- a/test/data/enm/study-FCSV-581de4bc-a29b-3276-afc7-70c1c86a85ec.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-581de4bc-a29b-3276-afc7-70c1c86a85ec",
- "owner": {
- "substance": {
- "uuid": "FCSV-c4fe20ba-de05-36c2-9842-5433ce33bd72"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-582502cb-2afc-3cbf-8091-7bce8dd4dcfa.json b/test/data/enm/study-FCSV-582502cb-2afc-3cbf-8091-7bce8dd4dcfa.json
deleted file mode 100644
index a346552..0000000
--- a/test/data/enm/study-FCSV-582502cb-2afc-3cbf-8091-7bce8dd4dcfa.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-582502cb-2afc-3cbf-8091-7bce8dd4dcfa",
- "owner": {
- "substance": {
- "uuid": "FCSV-ceed5aa6-a62e-3202-9bcf-702a94d34785"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 239.859,
- "errQualifier": "sd",
- "errorValue": 9.894
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 1,
- "errQualifier": "sem",
- "errorValue": 0.033
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-582c6116-492c-3473-8b0f-28bb2176ccc6.json b/test/data/enm/study-FCSV-582c6116-492c-3473-8b0f-28bb2176ccc6.json
deleted file mode 100644
index dae4315..0000000
--- a/test/data/enm/study-FCSV-582c6116-492c-3473-8b0f-28bb2176ccc6.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-582c6116-492c-3473-8b0f-28bb2176ccc6",
- "owner": {
- "substance": {
- "uuid": "FCSV-2b9a077f-bef3-3ffd-a83a-77dd85db129a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.015,
- "errQualifier": "sd",
- "errorValue": 0.026
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -6.068,
- "errQualifier": "std",
- "errorValue": 2.499
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-58857194-1af7-3226-9c7c-09773a00ce14.json b/test/data/enm/study-FCSV-58857194-1af7-3226-9c7c-09773a00ce14.json
deleted file mode 100644
index f0c986a..0000000
--- a/test/data/enm/study-FCSV-58857194-1af7-3226-9c7c-09773a00ce14.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-58857194-1af7-3226-9c7c-09773a00ce14",
- "owner": {
- "substance": {
- "uuid": "FCSV-8619e6db-2c01-389e-b05b-e75273d18359"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 31.6,
- "errQualifier": "sd",
- "errorValue": 3.8
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-58e9db17-40c9-3cf0-b201-a5961161829f.json b/test/data/enm/study-FCSV-58e9db17-40c9-3cf0-b201-a5961161829f.json
deleted file mode 100644
index 01e4fb7..0000000
--- a/test/data/enm/study-FCSV-58e9db17-40c9-3cf0-b201-a5961161829f.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-58e9db17-40c9-3cf0-b201-a5961161829f",
- "owner": {
- "substance": {
- "uuid": "FCSV-2b9a077f-bef3-3ffd-a83a-77dd85db129a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-58fd76c5-684c-3616-ad55-46c16b0ff8ef.json b/test/data/enm/study-FCSV-58fd76c5-684c-3616-ad55-46c16b0ff8ef.json
deleted file mode 100644
index 8fe25e5..0000000
--- a/test/data/enm/study-FCSV-58fd76c5-684c-3616-ad55-46c16b0ff8ef.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-58fd76c5-684c-3616-ad55-46c16b0ff8ef",
- "owner": {
- "substance": {
- "uuid": "FCSV-8e1a76df-a12d-3254-ae6b-28e20153ef59"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-59010f16-6298-377c-a6a7-b636b807ce34.json b/test/data/enm/study-FCSV-59010f16-6298-377c-a6a7-b636b807ce34.json
deleted file mode 100644
index 3f8733b..0000000
--- a/test/data/enm/study-FCSV-59010f16-6298-377c-a6a7-b636b807ce34.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-59010f16-6298-377c-a6a7-b636b807ce34",
- "owner": {
- "substance": {
- "uuid": "FCSV-9b1b9ad6-e41d-3ddd-8bea-561af1fc27aa"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Poly(vinylpyrrolidone)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-59c13065-bf6b-3561-bba3-c6839c8854ab.json b/test/data/enm/study-FCSV-59c13065-bf6b-3561-bba3-c6839c8854ab.json
deleted file mode 100644
index b1a8f8c..0000000
--- a/test/data/enm/study-FCSV-59c13065-bf6b-3561-bba3-c6839c8854ab.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-59c13065-bf6b-3561-bba3-c6839c8854ab",
- "owner": {
- "substance": {
- "uuid": "FCSV-b228fc7b-c407-368a-bc1c-359c7375bb9b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 239.576,
- "errQualifier": "sd",
- "errorValue": 19.379
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.008
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-59cbeffc-82bc-32de-ba2a-ed90abfa8b28.json b/test/data/enm/study-FCSV-59cbeffc-82bc-32de-ba2a-ed90abfa8b28.json
deleted file mode 100644
index aa5b9d5..0000000
--- a/test/data/enm/study-FCSV-59cbeffc-82bc-32de-ba2a-ed90abfa8b28.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-59cbeffc-82bc-32de-ba2a-ed90abfa8b28",
- "owner": {
- "substance": {
- "uuid": "FCSV-43f0ea59-aa2f-31d8-8d87-19c95ec9be18"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-59ecc05d-8f5c-3347-bc59-c93b6b1d1de0.json b/test/data/enm/study-FCSV-59ecc05d-8f5c-3347-bc59-c93b6b1d1de0.json
deleted file mode 100644
index 36b5ada..0000000
--- a/test/data/enm/study-FCSV-59ecc05d-8f5c-3347-bc59-c93b6b1d1de0.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-59ecc05d-8f5c-3347-bc59-c93b6b1d1de0",
- "owner": {
- "substance": {
- "uuid": "FCSV-de6203a6-aea6-3910-8f49-598f80ab6a17"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 24.07,
- "errQualifier": "sd",
- "errorValue": 0.62
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 41.94,
- "errQualifier": "sd",
- "errorValue": 1.68
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23.54,
- "errQualifier": "sd",
- "errorValue": 1.08
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 41.74,
- "errQualifier": "sd",
- "errorValue": 2.77
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 25.95,
- "errQualifier": "sd",
- "errorValue": 1.32
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 39.66,
- "errQualifier": "sd",
- "errorValue": 2.93
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 25.95,
- "errQualifier": "sd",
- "errorValue": 0.75
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 44.52,
- "errQualifier": "sd",
- "errorValue": 2.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-59f123cc-419e-3775-a169-876f31e5a34b.json b/test/data/enm/study-FCSV-59f123cc-419e-3775-a169-876f31e5a34b.json
deleted file mode 100644
index 32fdb58..0000000
--- a/test/data/enm/study-FCSV-59f123cc-419e-3775-a169-876f31e5a34b.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-59f123cc-419e-3775-a169-876f31e5a34b",
- "owner": {
- "substance": {
- "uuid": "FCSV-8b5b62c3-7fd2-3bba-b293-b7537e4971b1"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.049,
- "errQualifier": "sd",
- "errorValue": 0.002
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -4.339,
- "errQualifier": "std",
- "errorValue": 0.059
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5a140613-2cb9-3438-bf9a-c9f9a58b03aa.json b/test/data/enm/study-FCSV-5a140613-2cb9-3438-bf9a-c9f9a58b03aa.json
deleted file mode 100644
index 254b30a..0000000
--- a/test/data/enm/study-FCSV-5a140613-2cb9-3438-bf9a-c9f9a58b03aa.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-5a140613-2cb9-3438-bf9a-c9f9a58b03aa",
- "owner": {
- "substance": {
- "uuid": "FCSV-9294730f-3d55-36da-80b9-eb2df162e805"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.147,
- "errQualifier": "sd",
- "errorValue": 0.101
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -2.765,
- "errQualifier": "std",
- "errorValue": 0.993
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5a4dc37a-507e-3b7d-a9f9-f17800ccf440.json b/test/data/enm/study-FCSV-5a4dc37a-507e-3b7d-a9f9-f17800ccf440.json
deleted file mode 100644
index 558b6d5..0000000
--- a/test/data/enm/study-FCSV-5a4dc37a-507e-3b7d-a9f9-f17800ccf440.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-5a4dc37a-507e-3b7d-a9f9-f17800ccf440",
- "owner": {
- "substance": {
- "uuid": "FCSV-cd7105f2-f630-360e-b8dc-ff42b18bb421"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.009,
- "errQualifier": "sd",
- "errorValue": 0.006
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -6.804,
- "errQualifier": "std",
- "errorValue": 0.988
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5a524eff-aecf-370c-9084-74493402e97a.json b/test/data/enm/study-FCSV-5a524eff-aecf-370c-9084-74493402e97a.json
deleted file mode 100644
index 0849ef8..0000000
--- a/test/data/enm/study-FCSV-5a524eff-aecf-370c-9084-74493402e97a.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-5a524eff-aecf-370c-9084-74493402e97a",
- "owner": {
- "substance": {
- "uuid": "FCSV-0fe5f223-9c02-363c-a23c-70f1f36ffbec"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -21.42,
- "errQualifier": "sd",
- "errorValue": 7.7
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -6.54,
- "errQualifier": "sd",
- "errorValue": 1.01
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5a5a712a-94af-365c-a9b5-ecce4cbc9f43.json b/test/data/enm/study-FCSV-5a5a712a-94af-365c-a9b5-ecce4cbc9f43.json
deleted file mode 100644
index ecd6dd9..0000000
--- a/test/data/enm/study-FCSV-5a5a712a-94af-365c-a9b5-ecce4cbc9f43.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-5a5a712a-94af-365c-a9b5-ecce4cbc9f43",
- "owner": {
- "substance": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.156,
- "errQualifier": "sd",
- "errorValue": 0.108
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.25,
- "errQualifier": "sd",
- "errorValue": 0.002
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 520.3,
- "errQualifier": "sd",
- "errorValue": 0.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5b2adf04-309c-3f72-ae32-ead5f869e961.json b/test/data/enm/study-FCSV-5b2adf04-309c-3f72-ae32-ead5f869e961.json
deleted file mode 100644
index 59706a0..0000000
--- a/test/data/enm/study-FCSV-5b2adf04-309c-3f72-ae32-ead5f869e961.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-5b2adf04-309c-3f72-ae32-ead5f869e961",
- "owner": {
- "substance": {
- "uuid": "FCSV-9cc7dd73-d27f-35a0-a3f1-81a18429b76a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.224,
- "errQualifier": "sd",
- "errorValue": 0.065
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.275,
- "errQualifier": "sd",
- "errorValue": 0.006
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 518.33,
- "errQualifier": "sd",
- "errorValue": 0.06
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5b417954-3cbf-3490-8eeb-b57e5988dd9d.json b/test/data/enm/study-FCSV-5b417954-3cbf-3490-8eeb-b57e5988dd9d.json
deleted file mode 100644
index 6b04cd7..0000000
--- a/test/data/enm/study-FCSV-5b417954-3cbf-3490-8eeb-b57e5988dd9d.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-5b417954-3cbf-3490-8eeb-b57e5988dd9d",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f0e4035-24d4-3a81-b20b-bd156f210616"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5b621862-27ce-3b95-9874-ea5ad88850b1.json b/test/data/enm/study-FCSV-5b621862-27ce-3b95-9874-ea5ad88850b1.json
deleted file mode 100644
index 9f60c8d..0000000
--- a/test/data/enm/study-FCSV-5b621862-27ce-3b95-9874-ea5ad88850b1.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-5b621862-27ce-3b95-9874-ea5ad88850b1",
- "owner": {
- "substance": {
- "uuid": "FCSV-a3c8dce5-07ab-3ca6-91a0-84072fc24aed"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5ba55501-90f8-3ccf-96fb-9549c4ce0abe.json b/test/data/enm/study-FCSV-5ba55501-90f8-3ccf-96fb-9549c4ce0abe.json
deleted file mode 100644
index cc7be21..0000000
--- a/test/data/enm/study-FCSV-5ba55501-90f8-3ccf-96fb-9549c4ce0abe.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-5ba55501-90f8-3ccf-96fb-9549c4ce0abe",
- "owner": {
- "substance": {
- "uuid": "FCSV-ffe19c9e-b1a1-3f38-a149-0d587fc5b172"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Methoxy-poly(ethylene glycol)-thiol (2kDa)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5bb32a36-80ed-3481-b773-ba7b1f62c5c2.json b/test/data/enm/study-FCSV-5bb32a36-80ed-3481-b773-ba7b1f62c5c2.json
deleted file mode 100644
index 0597355..0000000
--- a/test/data/enm/study-FCSV-5bb32a36-80ed-3481-b773-ba7b1f62c5c2.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-5bb32a36-80ed-3481-b773-ba7b1f62c5c2",
- "owner": {
- "substance": {
- "uuid": "FCSV-8dc5c24b-2e89-3833-b94d-920674a956a0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.092,
- "errQualifier": "sd",
- "errorValue": 0.039
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.166,
- "errQualifier": "sd",
- "errorValue": 0.025
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5bc3bc77-beda-385b-99d6-89c4da5b59f1.json b/test/data/enm/study-FCSV-5bc3bc77-beda-385b-99d6-89c4da5b59f1.json
deleted file mode 100644
index f9d06b3..0000000
--- a/test/data/enm/study-FCSV-5bc3bc77-beda-385b-99d6-89c4da5b59f1.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-5bc3bc77-beda-385b-99d6-89c4da5b59f1",
- "owner": {
- "substance": {
- "uuid": "FCSV-1842b3a2-413c-327c-a07a-9905269bafb5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Thiolated L-phenylalanine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5c970565-7f13-38e0-b804-e3011191f9fc.json b/test/data/enm/study-FCSV-5c970565-7f13-38e0-b804-e3011191f9fc.json
deleted file mode 100644
index eeb8910..0000000
--- a/test/data/enm/study-FCSV-5c970565-7f13-38e0-b804-e3011191f9fc.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-5c970565-7f13-38e0-b804-e3011191f9fc",
- "owner": {
- "substance": {
- "uuid": "FCSV-9e599ca9-9a8f-3094-a97b-3fb35b08a82a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.071,
- "errQualifier": "sd",
- "errorValue": 0.005
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -3.807,
- "errQualifier": "std",
- "errorValue": 0.094
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5c9db0d0-bfa2-304d-b2f8-38e8d3c2b9f7.json b/test/data/enm/study-FCSV-5c9db0d0-bfa2-304d-b2f8-38e8d3c2b9f7.json
deleted file mode 100644
index ff5c57e..0000000
--- a/test/data/enm/study-FCSV-5c9db0d0-bfa2-304d-b2f8-38e8d3c2b9f7.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-5c9db0d0-bfa2-304d-b2f8-38e8d3c2b9f7",
- "owner": {
- "substance": {
- "uuid": "FCSV-a7f3867d-85fc-33ab-8167-66b73c818f31"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.255,
- "errQualifier": "sd",
- "errorValue": 0.004
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.374,
- "errQualifier": "sd",
- "errorValue": 0.015
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 521.53,
- "errQualifier": "sd",
- "errorValue": 0.12
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5cb563d7-f766-332e-952d-41d79da1d09f.json b/test/data/enm/study-FCSV-5cb563d7-f766-332e-952d-41d79da1d09f.json
deleted file mode 100644
index 16ce37b..0000000
--- a/test/data/enm/study-FCSV-5cb563d7-f766-332e-952d-41d79da1d09f.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-5cb563d7-f766-332e-952d-41d79da1d09f",
- "owner": {
- "substance": {
- "uuid": "FCSV-815715e8-0cc8-3641-897c-4530d961cfe0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 2.652,
- "errQualifier": "sd",
- "errorValue": 0.08
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5cc0b76e-21c2-3896-88ea-c9008a7ced46.json b/test/data/enm/study-FCSV-5cc0b76e-21c2-3896-88ea-c9008a7ced46.json
deleted file mode 100644
index 45319ec..0000000
--- a/test/data/enm/study-FCSV-5cc0b76e-21c2-3896-88ea-c9008a7ced46.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-5cc0b76e-21c2-3896-88ea-c9008a7ced46",
- "owner": {
- "substance": {
- "uuid": "FCSV-9df9ed76-5f94-3ecb-b661-a56e168a71bf"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 48.24,
- "errQualifier": "sd",
- "errorValue": 0.71
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 47.07,
- "errQualifier": "sd",
- "errorValue": 2.1
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 51.56,
- "errQualifier": "sd",
- "errorValue": 8.83
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 114.34,
- "errQualifier": "sd",
- "errorValue": 117.72
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 54,
- "errQualifier": "sd",
- "errorValue": 0.94
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 42.06,
- "errQualifier": "sd",
- "errorValue": 2.57
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 54,
- "errQualifier": "sd",
- "errorValue": 3.08
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 69.39,
- "errQualifier": "sd",
- "errorValue": 32.48
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5cd29dce-7778-3c3e-9569-1595b8e16174.json b/test/data/enm/study-FCSV-5cd29dce-7778-3c3e-9569-1595b8e16174.json
deleted file mode 100644
index 33a8ec8..0000000
--- a/test/data/enm/study-FCSV-5cd29dce-7778-3c3e-9569-1595b8e16174.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-5cd29dce-7778-3c3e-9569-1595b8e16174",
- "owner": {
- "substance": {
- "uuid": "FCSV-63da0f0e-51b8-3c56-b5d3-d4e0e9fb06a6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 419.977,
- "errQualifier": "sd",
- "errorValue": 41.565
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 8,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.016
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5ced5828-df71-3662-8f94-90424eeefd1a.json b/test/data/enm/study-FCSV-5ced5828-df71-3662-8f94-90424eeefd1a.json
deleted file mode 100644
index 4495e87..0000000
--- a/test/data/enm/study-FCSV-5ced5828-df71-3662-8f94-90424eeefd1a.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-5ced5828-df71-3662-8f94-90424eeefd1a",
- "owner": {
- "substance": {
- "uuid": "FCSV-206b1a13-e02a-38a0-88ec-d5a8bfdabc55"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.333,
- "errQualifier": "sd",
- "errorValue": 0.239
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5d34733c-6718-3418-9093-ab0863866cb3.json b/test/data/enm/study-FCSV-5d34733c-6718-3418-9093-ab0863866cb3.json
deleted file mode 100644
index 2a3ce5b..0000000
--- a/test/data/enm/study-FCSV-5d34733c-6718-3418-9093-ab0863866cb3.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-5d34733c-6718-3418-9093-ab0863866cb3",
- "owner": {
- "substance": {
- "uuid": "FCSV-ed95bb69-9fa7-3a4a-b4a4-32dd947d4d1a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": 18.17,
- "errQualifier": "sd",
- "errorValue": 1.53
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -8.07,
- "errQualifier": "sd",
- "errorValue": 1.46
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5d4d0e3e-0171-3e07-a457-eb68d06cf06c.json b/test/data/enm/study-FCSV-5d4d0e3e-0171-3e07-a457-eb68d06cf06c.json
deleted file mode 100644
index 8cbd459..0000000
--- a/test/data/enm/study-FCSV-5d4d0e3e-0171-3e07-a457-eb68d06cf06c.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-5d4d0e3e-0171-3e07-a457-eb68d06cf06c",
- "owner": {
- "substance": {
- "uuid": "FCSV-0fe5f223-9c02-363c-a23c-70f1f36ffbec"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5e005b68-c958-3928-808f-a06027420ce5.json b/test/data/enm/study-FCSV-5e005b68-c958-3928-808f-a06027420ce5.json
deleted file mode 100644
index 836af22..0000000
--- a/test/data/enm/study-FCSV-5e005b68-c958-3928-808f-a06027420ce5.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-5e005b68-c958-3928-808f-a06027420ce5",
- "owner": {
- "substance": {
- "uuid": "FCSV-a7f3867d-85fc-33ab-8167-66b73c818f31"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 31.6,
- "errQualifier": "sd",
- "errorValue": 3.8
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5e02c9cc-7e48-313c-a68d-5ab53168e0f6.json b/test/data/enm/study-FCSV-5e02c9cc-7e48-313c-a68d-5ab53168e0f6.json
deleted file mode 100644
index 43fb5b8..0000000
--- a/test/data/enm/study-FCSV-5e02c9cc-7e48-313c-a68d-5ab53168e0f6.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-5e02c9cc-7e48-313c-a68d-5ab53168e0f6",
- "owner": {
- "substance": {
- "uuid": "FCSV-aab0ef77-8a71-36d7-9185-d2f76b9e3567"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Poly(vinyl alcohol)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5e36dbe8-bf0d-37cc-9673-bf2e3604ce24.json b/test/data/enm/study-FCSV-5e36dbe8-bf0d-37cc-9673-bf2e3604ce24.json
deleted file mode 100644
index 0e80df0..0000000
--- a/test/data/enm/study-FCSV-5e36dbe8-bf0d-37cc-9673-bf2e3604ce24.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-5e36dbe8-bf0d-37cc-9673-bf2e3604ce24",
- "owner": {
- "substance": {
- "uuid": "FCSV-edc7f198-f391-328e-aa68-7d3f00b62af5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 25.15,
- "errQualifier": "sd",
- "errorValue": 1.48
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 58.99,
- "errQualifier": "sd",
- "errorValue": 2.4
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 41.57,
- "errQualifier": "sd",
- "errorValue": 33.69
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 26.77,
- "errQualifier": "sd",
- "errorValue": 13.76
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 47.42,
- "errQualifier": "sd",
- "errorValue": 1.47
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 21.83,
- "errQualifier": "sd",
- "errorValue": 11.15
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 47.42,
- "errQualifier": "sd",
- "errorValue": 30.34
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 71.19,
- "errQualifier": "sd",
- "errorValue": 5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5ee60734-2e73-312f-86d4-87fa2bd69a50.json b/test/data/enm/study-FCSV-5ee60734-2e73-312f-86d4-87fa2bd69a50.json
deleted file mode 100644
index c442f7b..0000000
--- a/test/data/enm/study-FCSV-5ee60734-2e73-312f-86d4-87fa2bd69a50.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-5ee60734-2e73-312f-86d4-87fa2bd69a50",
- "owner": {
- "substance": {
- "uuid": "FCSV-8dc5c24b-2e89-3833-b94d-920674a956a0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
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- ]
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diff --git a/test/data/enm/study-FCSV-5ef980a3-d025-3c83-bf26-e84062f6f2be.json b/test/data/enm/study-FCSV-5ef980a3-d025-3c83-bf26-e84062f6f2be.json
deleted file mode 100644
index 1d78f1b..0000000
--- a/test/data/enm/study-FCSV-5ef980a3-d025-3c83-bf26-e84062f6f2be.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-5ef980a3-d025-3c83-bf26-e84062f6f2be",
- "owner": {
- "substance": {
- "uuid": "FCSV-05f4c488-5326-3d8a-be41-c57c468b2fa4"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 889.216,
- "errQualifier": "sd",
- "errorValue": 65.039
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.013
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- }
- ]
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diff --git a/test/data/enm/study-FCSV-5ef9a7d0-6fb0-305c-b524-a6650729ff76.json b/test/data/enm/study-FCSV-5ef9a7d0-6fb0-305c-b524-a6650729ff76.json
deleted file mode 100644
index abfbca2..0000000
--- a/test/data/enm/study-FCSV-5ef9a7d0-6fb0-305c-b524-a6650729ff76.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-5ef9a7d0-6fb0-305c-b524-a6650729ff76",
- "owner": {
- "substance": {
- "uuid": "FCSV-130b04ab-86e6-38d6-9276-e2db1b4dcffb"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -28.55,
- "errQualifier": "sd",
- "errorValue": 4.4
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -11.14,
- "errQualifier": "sd",
- "errorValue": 2.7
- }
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diff --git a/test/data/enm/study-FCSV-5f01a2b7-7b21-357a-b167-83af11d9ca27.json b/test/data/enm/study-FCSV-5f01a2b7-7b21-357a-b167-83af11d9ca27.json
deleted file mode 100644
index c326d10..0000000
--- a/test/data/enm/study-FCSV-5f01a2b7-7b21-357a-b167-83af11d9ca27.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-5f01a2b7-7b21-357a-b167-83af11d9ca27",
- "owner": {
- "substance": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5f02858f-68d7-36ec-a8bd-5984b4ebd926.json b/test/data/enm/study-FCSV-5f02858f-68d7-36ec-a8bd-5984b4ebd926.json
deleted file mode 100644
index 467b8fe..0000000
--- a/test/data/enm/study-FCSV-5f02858f-68d7-36ec-a8bd-5984b4ebd926.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-5f02858f-68d7-36ec-a8bd-5984b4ebd926",
- "owner": {
- "substance": {
- "uuid": "FCSV-cf1d4fd3-f16b-3680-96fa-0f5e4b9dd485"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
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- ]
-}
diff --git a/test/data/enm/study-FCSV-5f2363eb-0ed2-33b5-8bce-adb16542a0fa.json b/test/data/enm/study-FCSV-5f2363eb-0ed2-33b5-8bce-adb16542a0fa.json
deleted file mode 100644
index e745d69..0000000
--- a/test/data/enm/study-FCSV-5f2363eb-0ed2-33b5-8bce-adb16542a0fa.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-5f2363eb-0ed2-33b5-8bce-adb16542a0fa",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f5cd32a-3350-300b-91d0-87000ee5d7ee"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 240.729,
- "errQualifier": "sd",
- "errorValue": 1.237
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.038
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5f322f9f-338e-3d84-a771-9fdf35457dd2.json b/test/data/enm/study-FCSV-5f322f9f-338e-3d84-a771-9fdf35457dd2.json
deleted file mode 100644
index 7ccabed..0000000
--- a/test/data/enm/study-FCSV-5f322f9f-338e-3d84-a771-9fdf35457dd2.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-5f322f9f-338e-3d84-a771-9fdf35457dd2",
- "owner": {
- "substance": {
- "uuid": "FCSV-6ed95128-c2b8-3cfe-a0b4-29d2b06c6bc6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 1.247,
- "errQualifier": "sd",
- "errorValue": 0.075
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5f5b3239-09fb-3b50-a084-fddf4addb8b9.json b/test/data/enm/study-FCSV-5f5b3239-09fb-3b50-a084-fddf4addb8b9.json
deleted file mode 100644
index 5747c90..0000000
--- a/test/data/enm/study-FCSV-5f5b3239-09fb-3b50-a084-fddf4addb8b9.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-5f5b3239-09fb-3b50-a084-fddf4addb8b9",
- "owner": {
- "substance": {
- "uuid": "FCSV-3c5fb4b0-2e4e-3dae-9eb2-1dbfd202cd13"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5f7f003a-8224-3515-8c33-f1a8ca1a4494.json b/test/data/enm/study-FCSV-5f7f003a-8224-3515-8c33-f1a8ca1a4494.json
deleted file mode 100644
index 5e08af0..0000000
--- a/test/data/enm/study-FCSV-5f7f003a-8224-3515-8c33-f1a8ca1a4494.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-5f7f003a-8224-3515-8c33-f1a8ca1a4494",
- "owner": {
- "substance": {
- "uuid": "FCSV-ffe19c9e-b1a1-3f38-a149-0d587fc5b172"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -6.3,
- "errQualifier": "sd",
- "errorValue": 2.51
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -2.75,
- "errQualifier": "sd",
- "errorValue": 2.77
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5ff3c7d9-f086-3cc2-8a11-e14fadfa1126.json b/test/data/enm/study-FCSV-5ff3c7d9-f086-3cc2-8a11-e14fadfa1126.json
deleted file mode 100644
index 32507e0..0000000
--- a/test/data/enm/study-FCSV-5ff3c7d9-f086-3cc2-8a11-e14fadfa1126.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-5ff3c7d9-f086-3cc2-8a11-e14fadfa1126",
- "owner": {
- "substance": {
- "uuid": "FCSV-6b15ab65-c2d3-3e58-ac04-18d8e1d45a7a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.23,
- "errQualifier": "sd",
- "errorValue": 0.041
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.442,
- "errQualifier": "sd",
- "errorValue": 0.014
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 519.1,
- "errQualifier": "sd",
- "errorValue": 0.26
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-5ff5db50-0ede-3e89-96b9-ec56ca8eefb8.json b/test/data/enm/study-FCSV-5ff5db50-0ede-3e89-96b9-ec56ca8eefb8.json
deleted file mode 100644
index ee69111..0000000
--- a/test/data/enm/study-FCSV-5ff5db50-0ede-3e89-96b9-ec56ca8eefb8.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-5ff5db50-0ede-3e89-96b9-ec56ca8eefb8",
- "owner": {
- "substance": {
- "uuid": "FCSV-9964d099-d8aa-3a89-863c-d69fc921bee2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 248.306,
- "errQualifier": "sd",
- "errorValue": 11.952
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 1,
- "errQualifier": "sem",
- "errorValue": 0.047
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-603112e5-3847-3399-a746-ddfae270c73b.json b/test/data/enm/study-FCSV-603112e5-3847-3399-a746-ddfae270c73b.json
deleted file mode 100644
index 34f7d88..0000000
--- a/test/data/enm/study-FCSV-603112e5-3847-3399-a746-ddfae270c73b.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-603112e5-3847-3399-a746-ddfae270c73b",
- "owner": {
- "substance": {
- "uuid": "FCSV-9c9a7234-a74f-326f-a134-79e004c1f687"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 630.444,
- "errQualifier": "sd",
- "errorValue": 38.609
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.014
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6036e605-253f-376b-aac6-dbec7f63577b.json b/test/data/enm/study-FCSV-6036e605-253f-376b-aac6-dbec7f63577b.json
deleted file mode 100644
index 7ccdb41..0000000
--- a/test/data/enm/study-FCSV-6036e605-253f-376b-aac6-dbec7f63577b.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-6036e605-253f-376b-aac6-dbec7f63577b",
- "owner": {
- "substance": {
- "uuid": "FCSV-2a853f39-424f-3a63-91f3-1300f85ebe73"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.006,
- "errQualifier": "sd",
- "errorValue": 0.002
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -7.294,
- "errQualifier": "std",
- "errorValue": 0.564
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-606bda8b-9bac-31cd-8864-504a0acb05ac.json b/test/data/enm/study-FCSV-606bda8b-9bac-31cd-8864-504a0acb05ac.json
deleted file mode 100644
index 7b37089..0000000
--- a/test/data/enm/study-FCSV-606bda8b-9bac-31cd-8864-504a0acb05ac.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-606bda8b-9bac-31cd-8864-504a0acb05ac",
- "owner": {
- "substance": {
- "uuid": "FCSV-07ecc16e-528e-3904-bb96-0812dff8ea65"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 38.4,
- "errQualifier": "sd",
- "errorValue": 2.5
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 10.5
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 108
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-608bfc0f-2ad3-3104-ad1f-79c8fe5557f8.json b/test/data/enm/study-FCSV-608bfc0f-2ad3-3104-ad1f-79c8fe5557f8.json
deleted file mode 100644
index 8ab54ae..0000000
--- a/test/data/enm/study-FCSV-608bfc0f-2ad3-3104-ad1f-79c8fe5557f8.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-608bfc0f-2ad3-3104-ad1f-79c8fe5557f8",
- "owner": {
- "substance": {
- "uuid": "FCSV-a153cba3-a82d-3e3c-bcbd-335cc5155f44"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -26.48,
- "errQualifier": "sd",
- "errorValue": 2.02
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -8.95,
- "errQualifier": "sd",
- "errorValue": 1.57
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-608d5d97-0158-3ffb-bb59-96b0f2fedb2b.json b/test/data/enm/study-FCSV-608d5d97-0158-3ffb-bb59-96b0f2fedb2b.json
deleted file mode 100644
index e390f5d..0000000
--- a/test/data/enm/study-FCSV-608d5d97-0158-3ffb-bb59-96b0f2fedb2b.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-608d5d97-0158-3ffb-bb59-96b0f2fedb2b",
- "owner": {
- "substance": {
- "uuid": "FCSV-93c29ebf-e80e-354c-893f-923385c72858"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 4.038,
- "errQualifier": "sd",
- "errorValue": 0.949
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-60a3f3de-3a82-3823-a949-1a6e369e43f1.json b/test/data/enm/study-FCSV-60a3f3de-3a82-3823-a949-1a6e369e43f1.json
deleted file mode 100644
index 09de7b4..0000000
--- a/test/data/enm/study-FCSV-60a3f3de-3a82-3823-a949-1a6e369e43f1.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-60a3f3de-3a82-3823-a949-1a6e369e43f1",
- "owner": {
- "substance": {
- "uuid": "FCSV-0d5c0fc7-de56-3507-b651-1c91bf030465"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 253.215,
- "errQualifier": "sd",
- "errorValue": 11.471
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.028
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-60dddd16-8425-39df-a74c-297036759898.json b/test/data/enm/study-FCSV-60dddd16-8425-39df-a74c-297036759898.json
deleted file mode 100644
index 5e6f2e1..0000000
--- a/test/data/enm/study-FCSV-60dddd16-8425-39df-a74c-297036759898.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-60dddd16-8425-39df-a74c-297036759898",
- "owner": {
- "substance": {
- "uuid": "FCSV-b228fc7b-c407-368a-bc1c-359c7375bb9b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.268,
- "errQualifier": "sd",
- "errorValue": 0.018
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.273,
- "errQualifier": "sd",
- "errorValue": 0.008
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 520.97,
- "errQualifier": "sd",
- "errorValue": 0.25
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6154b8fc-f2a0-3f81-b881-84bf7aba3ba0.json b/test/data/enm/study-FCSV-6154b8fc-f2a0-3f81-b881-84bf7aba3ba0.json
deleted file mode 100644
index ec11dc5..0000000
--- a/test/data/enm/study-FCSV-6154b8fc-f2a0-3f81-b881-84bf7aba3ba0.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-6154b8fc-f2a0-3f81-b881-84bf7aba3ba0",
- "owner": {
- "substance": {
- "uuid": "FCSV-45779e93-a25d-39cc-9294-afc0b59f3cd6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 19.85,
- "errQualifier": "sd",
- "errorValue": 17.19
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 38.69,
- "errQualifier": "sd",
- "errorValue": 4.24
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20.14,
- "errQualifier": "sd",
- "errorValue": 17.44
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 33.52,
- "errQualifier": "sd",
- "errorValue": 2.28
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 21.49,
- "errQualifier": "sd",
- "errorValue": 16.5
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 30.34,
- "errQualifier": "sd",
- "errorValue": 4.26
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 21.49,
- "errQualifier": "sd",
- "errorValue": 18.61
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 40.44,
- "errQualifier": "sd",
- "errorValue": 5.01
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6265f637-3b3b-3fb3-abbf-da1b4550cc42.json b/test/data/enm/study-FCSV-6265f637-3b3b-3fb3-abbf-da1b4550cc42.json
deleted file mode 100644
index 54bfbc6..0000000
--- a/test/data/enm/study-FCSV-6265f637-3b3b-3fb3-abbf-da1b4550cc42.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-6265f637-3b3b-3fb3-abbf-da1b4550cc42",
- "owner": {
- "substance": {
- "uuid": "FCSV-ee07f574-0b80-31db-b1f2-535f6d6626b0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 1.387,
- "errQualifier": "sd",
- "errorValue": 0.775
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-627f7fa1-f27a-3d67-a18b-c2bcfee72e70.json b/test/data/enm/study-FCSV-627f7fa1-f27a-3d67-a18b-c2bcfee72e70.json
deleted file mode 100644
index c2c5029..0000000
--- a/test/data/enm/study-FCSV-627f7fa1-f27a-3d67-a18b-c2bcfee72e70.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-627f7fa1-f27a-3d67-a18b-c2bcfee72e70",
- "owner": {
- "substance": {
- "uuid": "FCSV-b38f2b71-aa2d-3d72-af88-166a60bedee2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-62848c60-028b-3d11-9ce7-bf3384a1f0f1.json b/test/data/enm/study-FCSV-62848c60-028b-3d11-9ce7-bf3384a1f0f1.json
deleted file mode 100644
index 10bac65..0000000
--- a/test/data/enm/study-FCSV-62848c60-028b-3d11-9ce7-bf3384a1f0f1.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-62848c60-028b-3d11-9ce7-bf3384a1f0f1",
- "owner": {
- "substance": {
- "uuid": "FCSV-7c42c2b4-dcbe-39a4-ae4e-0f0c41a7a5a5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "TWEEN20"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-62859f84-6202-3c04-bce1-b85fa440314a.json b/test/data/enm/study-FCSV-62859f84-6202-3c04-bce1-b85fa440314a.json
deleted file mode 100644
index f287ed3..0000000
--- a/test/data/enm/study-FCSV-62859f84-6202-3c04-bce1-b85fa440314a.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-62859f84-6202-3c04-bce1-b85fa440314a",
- "owner": {
- "substance": {
- "uuid": "FCSV-4dd1bf89-e885-3128-abe2-9a87fbbd0242"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "1-Dodecanethiol"
- }
- },
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "benzyldimethylhexadecylammonium bromide"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-634009a8-b662-3d01-a692-97883dfcda43.json b/test/data/enm/study-FCSV-634009a8-b662-3d01-a692-97883dfcda43.json
deleted file mode 100644
index 9acb4f0..0000000
--- a/test/data/enm/study-FCSV-634009a8-b662-3d01-a692-97883dfcda43.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-634009a8-b662-3d01-a692-97883dfcda43",
- "owner": {
- "substance": {
- "uuid": "FCSV-7c56798c-f7cd-37d3-8a67-ead57f36db31"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 261.99,
- "errQualifier": "sd",
- "errorValue": 1.518
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 1,
- "errQualifier": "sem",
- "errorValue": 0.05
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-63886c6d-c4e7-378b-855b-a716c89a555b.json b/test/data/enm/study-FCSV-63886c6d-c4e7-378b-855b-a716c89a555b.json
deleted file mode 100644
index 4f00a02..0000000
--- a/test/data/enm/study-FCSV-63886c6d-c4e7-378b-855b-a716c89a555b.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-63886c6d-c4e7-378b-855b-a716c89a555b",
- "owner": {
- "substance": {
- "uuid": "FCSV-45779e93-a25d-39cc-9294-afc0b59f3cd6"
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- "company": {
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- "year": "2014",
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- },
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diff --git a/test/data/enm/study-FCSV-6427f82a-8d8d-3360-9621-0e6959543259.json b/test/data/enm/study-FCSV-6427f82a-8d8d-3360-9621-0e6959543259.json
deleted file mode 100644
index d700311..0000000
--- a/test/data/enm/study-FCSV-6427f82a-8d8d-3360-9621-0e6959543259.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-6427f82a-8d8d-3360-9621-0e6959543259",
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- "year": "2014",
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- },
- "protocol": {
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- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
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diff --git a/test/data/enm/study-FCSV-646385e8-096d-3917-bfce-661b56b8ea50.json b/test/data/enm/study-FCSV-646385e8-096d-3917-bfce-661b56b8ea50.json
deleted file mode 100644
index 683dfda..0000000
--- a/test/data/enm/study-FCSV-646385e8-096d-3917-bfce-661b56b8ea50.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
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diff --git a/test/data/enm/study-FCSV-6469b88c-267c-3149-94a8-72b942b2ca5b.json b/test/data/enm/study-FCSV-6469b88c-267c-3149-94a8-72b942b2ca5b.json
deleted file mode 100644
index 38adf46..0000000
--- a/test/data/enm/study-FCSV-6469b88c-267c-3149-94a8-72b942b2ca5b.json
+++ /dev/null
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-{
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-64889944-534b-3c4e-85d2-d4598df38d81.json b/test/data/enm/study-FCSV-64889944-534b-3c4e-85d2-d4598df38d81.json
deleted file mode 100644
index b4c9e01..0000000
--- a/test/data/enm/study-FCSV-64889944-534b-3c4e-85d2-d4598df38d81.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-64889944-534b-3c4e-85d2-d4598df38d81",
- "owner": {
- "substance": {
- "uuid": "FCSV-6b15ab65-c2d3-3e58-ac04-18d8e1d45a7a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.04,
- "errQualifier": "sd",
- "errorValue": 0.023
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -4.652,
- "errQualifier": "std",
- "errorValue": 0.846
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-649acc8e-ffec-3572-af87-8cbaf7f9559a.json b/test/data/enm/study-FCSV-649acc8e-ffec-3572-af87-8cbaf7f9559a.json
deleted file mode 100644
index 9f0d3ff..0000000
--- a/test/data/enm/study-FCSV-649acc8e-ffec-3572-af87-8cbaf7f9559a.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-649acc8e-ffec-3572-af87-8cbaf7f9559a",
- "owner": {
- "substance": {
- "uuid": "FCSV-98074b22-064e-3cd7-a732-f5fa3005fa73"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.769,
- "errQualifier": "sd",
- "errorValue": 0.109
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-64b5f157-d965-3d73-9f18-84c0e395c577.json b/test/data/enm/study-FCSV-64b5f157-d965-3d73-9f18-84c0e395c577.json
deleted file mode 100644
index bb47317..0000000
--- a/test/data/enm/study-FCSV-64b5f157-d965-3d73-9f18-84c0e395c577.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-64b5f157-d965-3d73-9f18-84c0e395c577",
- "owner": {
- "substance": {
- "uuid": "FCSV-2ed7ebf8-d11d-3f39-8f05-b0132ec4d7e0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 59.3,
- "errQualifier": "sd",
- "errorValue": 6.4
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-64b7599f-b316-3000-8c4f-07fd8425e40a.json b/test/data/enm/study-FCSV-64b7599f-b316-3000-8c4f-07fd8425e40a.json
deleted file mode 100644
index 142065c..0000000
--- a/test/data/enm/study-FCSV-64b7599f-b316-3000-8c4f-07fd8425e40a.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-64b7599f-b316-3000-8c4f-07fd8425e40a",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc2c755f-9eee-30e3-9e98-1fbb2397c980"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 42.22,
- "errQualifier": "sd",
- "errorValue": 1.02
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 66.32,
- "errQualifier": "sd",
- "errorValue": 2.74
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 40.83,
- "errQualifier": "sd",
- "errorValue": 1.67
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 44.32,
- "errQualifier": "sd",
- "errorValue": 3.14
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 45.54,
- "errQualifier": "sd",
- "errorValue": 2.22
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 38.06,
- "errQualifier": "sd",
- "errorValue": 2.76
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 45.54,
- "errQualifier": "sd",
- "errorValue": 2.97
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 75.3,
- "errQualifier": "sd",
- "errorValue": 4.83
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-64bf19a3-85ae-3403-9415-f846f14c7405.json b/test/data/enm/study-FCSV-64bf19a3-85ae-3403-9415-f846f14c7405.json
deleted file mode 100644
index bc82983..0000000
--- a/test/data/enm/study-FCSV-64bf19a3-85ae-3403-9415-f846f14c7405.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-64bf19a3-85ae-3403-9415-f846f14c7405",
- "owner": {
- "substance": {
- "uuid": "FCSV-edc7f198-f391-328e-aa68-7d3f00b62af5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.239,
- "errQualifier": "sd",
- "errorValue": 0.043
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.244,
- "errQualifier": "sd",
- "errorValue": 0.005
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-64c0e6eb-d5f6-3983-9b4a-d6e3968650a7.json b/test/data/enm/study-FCSV-64c0e6eb-d5f6-3983-9b4a-d6e3968650a7.json
deleted file mode 100644
index f9be8eb..0000000
--- a/test/data/enm/study-FCSV-64c0e6eb-d5f6-3983-9b4a-d6e3968650a7.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-64c0e6eb-d5f6-3983-9b4a-d6e3968650a7",
- "owner": {
- "substance": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
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- "interpretation": {
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- },
- "effects": [
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- "conditions": {
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 28.17,
- "errQualifier": "sd",
- "errorValue": 0.81
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 47.34,
- "errQualifier": "sd",
- "errorValue": 3.59
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loValue": 28.17,
- "errQualifier": "sd",
- "errorValue": 1.88
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 62.91,
- "errQualifier": "sd",
- "errorValue": 31.7
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31.58,
- "errQualifier": "sd",
- "errorValue": 2.18
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 34.51,
- "errQualifier": "sd",
- "errorValue": 10.08
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31.58,
- "errQualifier": "sd",
- "errorValue": 0.25
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 83.76,
- "errQualifier": "sd",
- "errorValue": 32.82
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-652c172a-ca7c-341f-9ec5-bdecb628d9b0.json b/test/data/enm/study-FCSV-652c172a-ca7c-341f-9ec5-bdecb628d9b0.json
deleted file mode 100644
index 11d25e1..0000000
--- a/test/data/enm/study-FCSV-652c172a-ca7c-341f-9ec5-bdecb628d9b0.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-652c172a-ca7c-341f-9ec5-bdecb628d9b0",
- "owner": {
- "substance": {
- "uuid": "FCSV-f3d54c07-7dd4-3124-b5bf-341eb9eb4e82"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.402,
- "errQualifier": "sd",
- "errorValue": 0.016
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -1.316,
- "errQualifier": "std",
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diff --git a/test/data/enm/study-FCSV-65524675-90cd-39f3-87e1-92f3cb8fe538.json b/test/data/enm/study-FCSV-65524675-90cd-39f3-87e1-92f3cb8fe538.json
deleted file mode 100644
index 552015e..0000000
--- a/test/data/enm/study-FCSV-65524675-90cd-39f3-87e1-92f3cb8fe538.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-65524675-90cd-39f3-87e1-92f3cb8fe538",
- "owner": {
- "substance": {
- "uuid": "FCSV-63da0f0e-51b8-3c56-b5d3-d4e0e9fb06a6"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-658682d3-8428-32e4-abc7-3b85fb6f2f67.json b/test/data/enm/study-FCSV-658682d3-8428-32e4-abc7-3b85fb6f2f67.json
deleted file mode 100644
index 9a64985..0000000
--- a/test/data/enm/study-FCSV-658682d3-8428-32e4-abc7-3b85fb6f2f67.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-658682d3-8428-32e4-abc7-3b85fb6f2f67",
- "owner": {
- "substance": {
- "uuid": "FCSV-99734121-3347-3d4e-9bc6-67956450b140"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 31.6,
- "errQualifier": "sd",
- "errorValue": 3.8
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
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- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-659f3f17-ba5b-3f52-ae40-0a9adbb931bb.json b/test/data/enm/study-FCSV-659f3f17-ba5b-3f52-ae40-0a9adbb931bb.json
deleted file mode 100644
index 0fa7558..0000000
--- a/test/data/enm/study-FCSV-659f3f17-ba5b-3f52-ae40-0a9adbb931bb.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-659f3f17-ba5b-3f52-ae40-0a9adbb931bb",
- "owner": {
- "substance": {
- "uuid": "FCSV-a3c8dce5-07ab-3ca6-91a0-84072fc24aed"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
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- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.211,
- "errQualifier": "sd",
- "errorValue": 0.092
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.236,
- "errQualifier": "sd",
- "errorValue": 0.005
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-65ac3f89-f2c4-385d-a746-3877728ef13a.json b/test/data/enm/study-FCSV-65ac3f89-f2c4-385d-a746-3877728ef13a.json
deleted file mode 100644
index 4e16753..0000000
--- a/test/data/enm/study-FCSV-65ac3f89-f2c4-385d-a746-3877728ef13a.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-65ac3f89-f2c4-385d-a746-3877728ef13a",
- "owner": {
- "substance": {
- "uuid": "FCSV-9df9ed76-5f94-3ecb-b661-a56e168a71bf"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
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- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
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- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.245,
- "errQualifier": "sd",
- "errorValue": 0.016
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.291,
- "errQualifier": "sd",
- "errorValue": 0.049
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 520.53,
- "errQualifier": "sd",
- "errorValue": 0.38
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-65c45738-768e-3258-be03-cf0b2c590064.json b/test/data/enm/study-FCSV-65c45738-768e-3258-be03-cf0b2c590064.json
deleted file mode 100644
index 27a5b66..0000000
--- a/test/data/enm/study-FCSV-65c45738-768e-3258-be03-cf0b2c590064.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-65c45738-768e-3258-be03-cf0b2c590064",
- "owner": {
- "substance": {
- "uuid": "FCSV-2a853f39-424f-3a63-91f3-1300f85ebe73"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
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- },
- "effects": [
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- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 234.611,
- "errQualifier": "sd",
- "errorValue": 2.471
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.002
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-661906a4-9d2f-323d-a96c-8038984ec75b.json b/test/data/enm/study-FCSV-661906a4-9d2f-323d-a96c-8038984ec75b.json
deleted file mode 100644
index ce202bb..0000000
--- a/test/data/enm/study-FCSV-661906a4-9d2f-323d-a96c-8038984ec75b.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-661906a4-9d2f-323d-a96c-8038984ec75b",
- "owner": {
- "substance": {
- "uuid": "FCSV-2ed7ebf8-d11d-3f39-8f05-b0132ec4d7e0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "2-Naphthalenethiol"
- }
- },
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "poly(vinyl alcohol)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6646262a-28df-3766-9f84-a4f0554b8d34.json b/test/data/enm/study-FCSV-6646262a-28df-3766-9f84-a4f0554b8d34.json
deleted file mode 100644
index 8f6fbfe..0000000
--- a/test/data/enm/study-FCSV-6646262a-28df-3766-9f84-a4f0554b8d34.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-6646262a-28df-3766-9f84-a4f0554b8d34",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
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- },
- "parameters": {
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- "loValue": "FUNCTIONALIZATION"
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- },
- "result": {
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- "textValue": "(11-Mercaptoundecyl)-N,N,N-trimethylammonium"
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- ]
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diff --git a/test/data/enm/study-FCSV-678982e8-7aca-3edc-8406-4a83e0ea0615.json b/test/data/enm/study-FCSV-678982e8-7aca-3edc-8406-4a83e0ea0615.json
deleted file mode 100644
index 4d684aa..0000000
--- a/test/data/enm/study-FCSV-678982e8-7aca-3edc-8406-4a83e0ea0615.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-678982e8-7aca-3edc-8406-4a83e0ea0615",
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- },
- "citation": {
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- "year": "2014",
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- },
- "protocol": {
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- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
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- "reliability": {
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- "loQualifier": "mean",
- "loValue": 0.109,
- "errQualifier": "sd",
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- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
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- "result": {
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- "loQualifier": "mean",
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- "errQualifier": "sd",
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diff --git a/test/data/enm/study-FCSV-67b42f96-63ae-3a8f-a6c9-0d4ea866d629.json b/test/data/enm/study-FCSV-67b42f96-63ae-3a8f-a6c9-0d4ea866d629.json
deleted file mode 100644
index 0ab3a2d..0000000
--- a/test/data/enm/study-FCSV-67b42f96-63ae-3a8f-a6c9-0d4ea866d629.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-67b42f96-63ae-3a8f-a6c9-0d4ea866d629",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
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- "r_value": null
- },
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- },
- "effects": [
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- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.024,
- "errQualifier": "sd",
- "errorValue": 0.015
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": -5.403,
- "errQualifier": "std",
- "errorValue": 0.929
- }
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- ]
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diff --git a/test/data/enm/study-FCSV-67bd95a6-4c9f-307c-8f22-de526233ff96.json b/test/data/enm/study-FCSV-67bd95a6-4c9f-307c-8f22-de526233ff96.json
deleted file mode 100644
index ae4fcab..0000000
--- a/test/data/enm/study-FCSV-67bd95a6-4c9f-307c-8f22-de526233ff96.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-67bd95a6-4c9f-307c-8f22-de526233ff96",
- "owner": {
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- "uuid": "FCSV-99734121-3347-3d4e-9bc6-67956450b140"
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- "company": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
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- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
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- "interpretation": {
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- "effects": [
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- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 3.232,
- "errQualifier": "sd",
- "errorValue": 0.668
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diff --git a/test/data/enm/study-FCSV-686590c5-b467-3d5d-8216-33d4f8dec853.json b/test/data/enm/study-FCSV-686590c5-b467-3d5d-8216-33d4f8dec853.json
deleted file mode 100644
index d516f02..0000000
--- a/test/data/enm/study-FCSV-686590c5-b467-3d5d-8216-33d4f8dec853.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-686590c5-b467-3d5d-8216-33d4f8dec853",
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
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- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
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- ]
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- },
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- "endpoint": "Number Mean Hydrodynamic Diameter",
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diff --git a/test/data/enm/study-FCSV-6872c2b5-9284-3b9e-ab2f-1972f64881ca.json b/test/data/enm/study-FCSV-6872c2b5-9284-3b9e-ab2f-1972f64881ca.json
deleted file mode 100644
index 2d10e9c..0000000
--- a/test/data/enm/study-FCSV-6872c2b5-9284-3b9e-ab2f-1972f64881ca.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-6872c2b5-9284-3b9e-ab2f-1972f64881ca",
- "owner": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- "year": "2014",
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- },
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diff --git a/test/data/enm/study-FCSV-6931af0f-8641-3d39-922d-e884fbdac88f.json b/test/data/enm/study-FCSV-6931af0f-8641-3d39-922d-e884fbdac88f.json
deleted file mode 100644
index fe31006..0000000
--- a/test/data/enm/study-FCSV-6931af0f-8641-3d39-922d-e884fbdac88f.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
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diff --git a/test/data/enm/study-FCSV-694fc7cb-2225-3cfc-a8c7-36e92133b33a.json b/test/data/enm/study-FCSV-694fc7cb-2225-3cfc-a8c7-36e92133b33a.json
deleted file mode 100644
index 712a75b..0000000
--- a/test/data/enm/study-FCSV-694fc7cb-2225-3cfc-a8c7-36e92133b33a.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-696a4de8-fd9a-3b27-98aa-b912a5d6f5c2.json b/test/data/enm/study-FCSV-696a4de8-fd9a-3b27-98aa-b912a5d6f5c2.json
deleted file mode 100644
index f0818b7..0000000
--- a/test/data/enm/study-FCSV-696a4de8-fd9a-3b27-98aa-b912a5d6f5c2.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-696a4de8-fd9a-3b27-98aa-b912a5d6f5c2",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f5e6fcb-23b9-3222-aa6e-4afcbba47715"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.947,
- "errQualifier": "sd",
- "errorValue": 0.251
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -0.079,
- "errQualifier": "std",
- "errorValue": 0.383
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-69de3e28-652e-3b4d-82ea-6557f7d78480.json b/test/data/enm/study-FCSV-69de3e28-652e-3b4d-82ea-6557f7d78480.json
deleted file mode 100644
index 50cb3ab..0000000
--- a/test/data/enm/study-FCSV-69de3e28-652e-3b4d-82ea-6557f7d78480.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-69de3e28-652e-3b4d-82ea-6557f7d78480",
- "owner": {
- "substance": {
- "uuid": "FCSV-70406142-0fd6-30bd-873b-5cce39016ed5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 1.421,
- "errQualifier": "sd",
- "errorValue": 0.676
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-69f6fb23-407c-3701-8389-c5dfe81dbf6f.json b/test/data/enm/study-FCSV-69f6fb23-407c-3701-8389-c5dfe81dbf6f.json
deleted file mode 100644
index 83a4691..0000000
--- a/test/data/enm/study-FCSV-69f6fb23-407c-3701-8389-c5dfe81dbf6f.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-69f6fb23-407c-3701-8389-c5dfe81dbf6f",
- "owner": {
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- "uuid": "FCSV-b38f2b71-aa2d-3d72-af88-166a60bedee2"
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- "effects": [
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- "endpoint": "Z-Average Hydrodynamic Diameter",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loValue": 42.05,
- "errQualifier": "sd",
- "errorValue": 21.99
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- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
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- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
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- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
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- "result": {
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- "MEDIUM": "Human serum (Sigma #H4522)",
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 57,
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- "errorValue": 2.68
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- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
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- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
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- "MEDIUM": "Human serum (Sigma #H4522)",
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- "Remark": null,
- "SEQ_NUM": null
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- "loValue": 38.14,
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- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
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- "Remark": null,
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- "endpoint": "Intensity Mean Hydrodynamic Diameter",
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- "Remark": null,
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diff --git a/test/data/enm/study-FCSV-6a5e9ee5-e18d-3e25-8eb3-e1842023c282.json b/test/data/enm/study-FCSV-6a5e9ee5-e18d-3e25-8eb3-e1842023c282.json
deleted file mode 100644
index 52ef747..0000000
--- a/test/data/enm/study-FCSV-6a5e9ee5-e18d-3e25-8eb3-e1842023c282.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-6a5e9ee5-e18d-3e25-8eb3-e1842023c282",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
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- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
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- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
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- "reliability": {
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- "effects": [
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- "endpoint": "ZETA POTENTIAL",
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- "pH": null
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- "result": {
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diff --git a/test/data/enm/study-FCSV-6a6882d4-b716-3774-94b3-ab9d537a5d08.json b/test/data/enm/study-FCSV-6a6882d4-b716-3774-94b3-ab9d537a5d08.json
deleted file mode 100644
index 7cb87e3..0000000
--- a/test/data/enm/study-FCSV-6a6882d4-b716-3774-94b3-ab9d537a5d08.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-6a6882d4-b716-3774-94b3-ab9d537a5d08",
- "owner": {
- "substance": {
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
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- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "PROTEOMICS_SECTION",
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- "effects": [
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6a9baa81-10e8-379f-8dc5-f79d5f8585cb.json b/test/data/enm/study-FCSV-6a9baa81-10e8-379f-8dc5-f79d5f8585cb.json
deleted file mode 100644
index 302a15d..0000000
--- a/test/data/enm/study-FCSV-6a9baa81-10e8-379f-8dc5-f79d5f8585cb.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-6a9baa81-10e8-379f-8dc5-f79d5f8585cb",
- "owner": {
- "substance": {
- "uuid": "FCSV-7c42c2b4-dcbe-39a4-ae4e-0f0c41a7a5a5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.208,
- "errQualifier": "sd",
- "errorValue": 0.054
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.251,
- "errQualifier": "sd",
- "errorValue": 0.008
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 520.87,
- "errQualifier": "sd",
- "errorValue": 0.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6aea99af-7833-35a5-b784-f6d0a97e59cf.json b/test/data/enm/study-FCSV-6aea99af-7833-35a5-b784-f6d0a97e59cf.json
deleted file mode 100644
index 41caabb..0000000
--- a/test/data/enm/study-FCSV-6aea99af-7833-35a5-b784-f6d0a97e59cf.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-6aea99af-7833-35a5-b784-f6d0a97e59cf",
- "owner": {
- "substance": {
- "uuid": "FCSV-a3c8dce5-07ab-3ca6-91a0-84072fc24aed"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 77.02,
- "errQualifier": "sd",
- "errorValue": 93.44
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 55.39,
- "errQualifier": "sd",
- "errorValue": 16.92
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 26.46,
- "errQualifier": "sd",
- "errorValue": 9.15
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 45.34,
- "errQualifier": "sd",
- "errorValue": 5.37
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 38.3,
- "errQualifier": "sd",
- "errorValue": 1.49
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 35.75,
- "errQualifier": "sd",
- "errorValue": 1.63
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 38.3,
- "errQualifier": "sd",
- "errorValue": 24.2
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 74.16,
- "errQualifier": "sd",
- "errorValue": 28.02
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6afb3046-f65e-343d-b745-1fc47ff92818.json b/test/data/enm/study-FCSV-6afb3046-f65e-343d-b745-1fc47ff92818.json
deleted file mode 100644
index eab68e2..0000000
--- a/test/data/enm/study-FCSV-6afb3046-f65e-343d-b745-1fc47ff92818.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-6afb3046-f65e-343d-b745-1fc47ff92818",
- "owner": {
- "substance": {
- "uuid": "FCSV-0fe5f223-9c02-363c-a23c-70f1f36ffbec"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6b0f981b-2eeb-3e95-bbd5-d49bf3c1cb3f.json b/test/data/enm/study-FCSV-6b0f981b-2eeb-3e95-bbd5-d49bf3c1cb3f.json
deleted file mode 100644
index 34e0e77..0000000
--- a/test/data/enm/study-FCSV-6b0f981b-2eeb-3e95-bbd5-d49bf3c1cb3f.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-6b0f981b-2eeb-3e95-bbd5-d49bf3c1cb3f",
- "owner": {
- "substance": {
- "uuid": "FCSV-3b96ad7a-bf2d-360d-881a-26094f498af6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.276,
- "errQualifier": "sd",
- "errorValue": 0.011
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.297,
- "errQualifier": "sd",
- "errorValue": 0.03
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 522.1,
- "errQualifier": "sd",
- "errorValue": 0.26
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6b3d395b-2ee2-351b-bae4-89b6e345d5d1.json b/test/data/enm/study-FCSV-6b3d395b-2ee2-351b-bae4-89b6e345d5d1.json
deleted file mode 100644
index ebdc332..0000000
--- a/test/data/enm/study-FCSV-6b3d395b-2ee2-351b-bae4-89b6e345d5d1.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-6b3d395b-2ee2-351b-bae4-89b6e345d5d1",
- "owner": {
- "substance": {
- "uuid": "FCSV-cd7105f2-f630-360e-b8dc-ff42b18bb421"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6bb96096-898b-3ceb-955a-77c02ae9fe42.json b/test/data/enm/study-FCSV-6bb96096-898b-3ceb-955a-77c02ae9fe42.json
deleted file mode 100644
index 5f64f66..0000000
--- a/test/data/enm/study-FCSV-6bb96096-898b-3ceb-955a-77c02ae9fe42.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-6bb96096-898b-3ceb-955a-77c02ae9fe42",
- "owner": {
- "substance": {
- "uuid": "FCSV-43f0ea59-aa2f-31d8-8d87-19c95ec9be18"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "L-Phenylalanine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6c266706-3749-33ec-8112-4cd0ea0b55d2.json b/test/data/enm/study-FCSV-6c266706-3749-33ec-8112-4cd0ea0b55d2.json
deleted file mode 100644
index 2288390..0000000
--- a/test/data/enm/study-FCSV-6c266706-3749-33ec-8112-4cd0ea0b55d2.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-6c266706-3749-33ec-8112-4cd0ea0b55d2",
- "owner": {
- "substance": {
- "uuid": "FCSV-9cc7dd73-d27f-35a0-a3f1-81a18429b76a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 22.64,
- "errQualifier": "sd",
- "errorValue": 0.28
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 44.43,
- "errQualifier": "sd",
- "errorValue": 1.7
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 22.32,
- "errQualifier": "sd",
- "errorValue": 2.81
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 44.8,
- "errQualifier": "sd",
- "errorValue": 2.53
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 35.03,
- "errQualifier": "sd",
- "errorValue": 1.61
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 34.07,
- "errQualifier": "sd",
- "errorValue": 5.86
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 35.03,
- "errQualifier": "sd",
- "errorValue": 17.36
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 63.72,
- "errQualifier": "sd",
- "errorValue": 14.71
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6d18a9b7-d089-32c2-a68a-5f5bc1846c4e.json b/test/data/enm/study-FCSV-6d18a9b7-d089-32c2-a68a-5f5bc1846c4e.json
deleted file mode 100644
index ce073b7..0000000
--- a/test/data/enm/study-FCSV-6d18a9b7-d089-32c2-a68a-5f5bc1846c4e.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-6d18a9b7-d089-32c2-a68a-5f5bc1846c4e",
- "owner": {
- "substance": {
- "uuid": "FCSV-9bf04ec0-f6b6-30a6-8970-19a51968532e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.04,
- "errQualifier": "sd",
- "errorValue": 0.018
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -4.648,
- "errQualifier": "std",
- "errorValue": 0.65
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6d84bb3a-c1d6-3d6f-9144-e40bf6f50b63.json b/test/data/enm/study-FCSV-6d84bb3a-c1d6-3d6f-9144-e40bf6f50b63.json
deleted file mode 100644
index 1121e02..0000000
--- a/test/data/enm/study-FCSV-6d84bb3a-c1d6-3d6f-9144-e40bf6f50b63.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-6d84bb3a-c1d6-3d6f-9144-e40bf6f50b63",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f0e4035-24d4-3a81-b20b-bd156f210616"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6e127528-80cc-30ff-b251-86ac023ed2d5.json b/test/data/enm/study-FCSV-6e127528-80cc-30ff-b251-86ac023ed2d5.json
deleted file mode 100644
index d16505c..0000000
--- a/test/data/enm/study-FCSV-6e127528-80cc-30ff-b251-86ac023ed2d5.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-6e127528-80cc-30ff-b251-86ac023ed2d5",
- "owner": {
- "substance": {
- "uuid": "FCSV-a153cba3-a82d-3e3c-bcbd-335cc5155f44"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 6.442,
- "errQualifier": "sd",
- "errorValue": 0.972
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6e37a157-59e6-34fe-8d18-5a65cdd14f89.json b/test/data/enm/study-FCSV-6e37a157-59e6-34fe-8d18-5a65cdd14f89.json
deleted file mode 100644
index 191821a..0000000
--- a/test/data/enm/study-FCSV-6e37a157-59e6-34fe-8d18-5a65cdd14f89.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-6e37a157-59e6-34fe-8d18-5a65cdd14f89",
- "owner": {
- "substance": {
- "uuid": "FCSV-8619e6db-2c01-389e-b05b-e75273d18359"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": 20.08,
- "errQualifier": "sd",
- "errorValue": 1.98
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -7.2,
- "errQualifier": "sd",
- "errorValue": 0.33
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6e49bfac-bb1b-30b3-b74a-4d6e61becd4f.json b/test/data/enm/study-FCSV-6e49bfac-bb1b-30b3-b74a-4d6e61becd4f.json
deleted file mode 100644
index 235ceff..0000000
--- a/test/data/enm/study-FCSV-6e49bfac-bb1b-30b3-b74a-4d6e61becd4f.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-6e49bfac-bb1b-30b3-b74a-4d6e61becd4f",
- "owner": {
- "substance": {
- "uuid": "FCSV-0d5c0fc7-de56-3507-b651-1c91bf030465"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.027,
- "errQualifier": "sd",
- "errorValue": 0.005
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -5.224,
- "errQualifier": "std",
- "errorValue": 0.246
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6e5bbb4f-3c98-3456-84b4-b40e484eefa7.json b/test/data/enm/study-FCSV-6e5bbb4f-3c98-3456-84b4-b40e484eefa7.json
deleted file mode 100644
index 5f1887a..0000000
--- a/test/data/enm/study-FCSV-6e5bbb4f-3c98-3456-84b4-b40e484eefa7.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-6e5bbb4f-3c98-3456-84b4-b40e484eefa7",
- "owner": {
- "substance": {
- "uuid": "FCSV-fb5e6048-8ee1-351d-915b-d1669681357e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.412,
- "errQualifier": "sd",
- "errorValue": 0.159
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6e68c064-b56b-3148-91ba-74704fc191b8.json b/test/data/enm/study-FCSV-6e68c064-b56b-3148-91ba-74704fc191b8.json
deleted file mode 100644
index 14931e5..0000000
--- a/test/data/enm/study-FCSV-6e68c064-b56b-3148-91ba-74704fc191b8.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-6e68c064-b56b-3148-91ba-74704fc191b8",
- "owner": {
- "substance": {
- "uuid": "FCSV-7c56798c-f7cd-37d3-8a67-ead57f36db31"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
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- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6e70f950-030c-3efe-9365-60071b37c508.json b/test/data/enm/study-FCSV-6e70f950-030c-3efe-9365-60071b37c508.json
deleted file mode 100644
index 1dbe66c..0000000
--- a/test/data/enm/study-FCSV-6e70f950-030c-3efe-9365-60071b37c508.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-6e70f950-030c-3efe-9365-60071b37c508",
- "owner": {
- "substance": {
- "uuid": "FCSV-9df9ed76-5f94-3ecb-b661-a56e168a71bf"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.153,
- "errQualifier": "sd",
- "errorValue": 0.028
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6e74d9d5-413b-3190-ae7a-43ed3ee55833.json b/test/data/enm/study-FCSV-6e74d9d5-413b-3190-ae7a-43ed3ee55833.json
deleted file mode 100644
index 2c0e934..0000000
--- a/test/data/enm/study-FCSV-6e74d9d5-413b-3190-ae7a-43ed3ee55833.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-6e74d9d5-413b-3190-ae7a-43ed3ee55833",
- "owner": {
- "substance": {
- "uuid": "FCSV-2a853f39-424f-3a63-91f3-1300f85ebe73"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.187,
- "errQualifier": "sd",
- "errorValue": 0.03
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.336,
- "errQualifier": "sd",
- "errorValue": 0.043
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6e950b2e-0248-3c29-83c4-2e3b637fefed.json b/test/data/enm/study-FCSV-6e950b2e-0248-3c29-83c4-2e3b637fefed.json
deleted file mode 100644
index 4327a99..0000000
--- a/test/data/enm/study-FCSV-6e950b2e-0248-3c29-83c4-2e3b637fefed.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-6e950b2e-0248-3c29-83c4-2e3b637fefed",
- "owner": {
- "substance": {
- "uuid": "FCSV-93c29ebf-e80e-354c-893f-923385c72858"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.297,
- "errQualifier": "sd",
- "errorValue": 0.062
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.286,
- "errQualifier": "sd",
- "errorValue": 0.022
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6eb8b79e-7ebf-341d-a2ee-1c7c46dd3972.json b/test/data/enm/study-FCSV-6eb8b79e-7ebf-341d-a2ee-1c7c46dd3972.json
deleted file mode 100644
index 237745d..0000000
--- a/test/data/enm/study-FCSV-6eb8b79e-7ebf-341d-a2ee-1c7c46dd3972.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-6eb8b79e-7ebf-341d-a2ee-1c7c46dd3972",
- "owner": {
- "substance": {
- "uuid": "FCSV-50aee86c-a3a2-3c46-86bf-5ac25485fc13"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.032,
- "errQualifier": "sd",
- "errorValue": 0.029
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -4.952,
- "errQualifier": "std",
- "errorValue": 1.311
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6eefb22e-558e-3574-a943-f26ad3952c09.json b/test/data/enm/study-FCSV-6eefb22e-558e-3574-a943-f26ad3952c09.json
deleted file mode 100644
index f35f917..0000000
--- a/test/data/enm/study-FCSV-6eefb22e-558e-3574-a943-f26ad3952c09.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-6eefb22e-558e-3574-a943-f26ad3952c09",
- "owner": {
- "substance": {
- "uuid": "FCSV-de6203a6-aea6-3910-8f49-598f80ab6a17"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6ef7ae9d-c41f-3121-ba50-ecb569dcfc49.json b/test/data/enm/study-FCSV-6ef7ae9d-c41f-3121-ba50-ecb569dcfc49.json
deleted file mode 100644
index 09b9e61..0000000
--- a/test/data/enm/study-FCSV-6ef7ae9d-c41f-3121-ba50-ecb569dcfc49.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-6ef7ae9d-c41f-3121-ba50-ecb569dcfc49",
- "owner": {
- "substance": {
- "uuid": "FCSV-4dd1bf89-e885-3128-abe2-9a87fbbd0242"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.148,
- "errQualifier": "sd",
- "errorValue": 0.033
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6f5ba7be-0358-359e-a41a-238ba9105d70.json b/test/data/enm/study-FCSV-6f5ba7be-0358-359e-a41a-238ba9105d70.json
deleted file mode 100644
index 02a2745..0000000
--- a/test/data/enm/study-FCSV-6f5ba7be-0358-359e-a41a-238ba9105d70.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-6f5ba7be-0358-359e-a41a-238ba9105d70",
- "owner": {
- "substance": {
- "uuid": "FCSV-fb5e6048-8ee1-351d-915b-d1669681357e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.014,
- "errQualifier": "sd",
- "errorValue": 0.007
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -6.122,
- "errQualifier": "std",
- "errorValue": 0.687
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6f7ff67a-b14e-3f65-96b8-9d10a58292d7.json b/test/data/enm/study-FCSV-6f7ff67a-b14e-3f65-96b8-9d10a58292d7.json
deleted file mode 100644
index 4054735..0000000
--- a/test/data/enm/study-FCSV-6f7ff67a-b14e-3f65-96b8-9d10a58292d7.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-6f7ff67a-b14e-3f65-96b8-9d10a58292d7",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc2c755f-9eee-30e3-9e98-1fbb2397c980"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.207,
- "errQualifier": "sd",
- "errorValue": 0.057
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.302,
- "errQualifier": "sd",
- "errorValue": 0.01
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 524.9,
- "errQualifier": "sd",
- "errorValue": 0.17
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-6f89d75f-7b39-37db-925c-aa66455b6c1c.json b/test/data/enm/study-FCSV-6f89d75f-7b39-37db-925c-aa66455b6c1c.json
deleted file mode 100644
index 1f1ee3b..0000000
--- a/test/data/enm/study-FCSV-6f89d75f-7b39-37db-925c-aa66455b6c1c.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-6f89d75f-7b39-37db-925c-aa66455b6c1c",
- "owner": {
- "substance": {
- "uuid": "FCSV-acbbde2e-0238-3d4c-a2f4-7629ad478e6a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.281,
- "errQualifier": "sd",
- "errorValue": 0.011
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.391,
- "errQualifier": "sd",
- "errorValue": 0.06
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 542.87,
- "errQualifier": "sd",
- "errorValue": 0.15
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-701d499e-29f3-3f25-8dab-ed638f1927dd.json b/test/data/enm/study-FCSV-701d499e-29f3-3f25-8dab-ed638f1927dd.json
deleted file mode 100644
index 927228d..0000000
--- a/test/data/enm/study-FCSV-701d499e-29f3-3f25-8dab-ed638f1927dd.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-701d499e-29f3-3f25-8dab-ed638f1927dd",
- "owner": {
- "substance": {
- "uuid": "FCSV-3adf8c83-83b1-3ffa-8868-b8527d83923b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 1.414,
- "errQualifier": "sd",
- "errorValue": 0.4
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.5,
- "errQualifier": "std",
- "errorValue": 0.408
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-70a792ad-74b6-3f67-9674-f3c1e8aad7c6.json b/test/data/enm/study-FCSV-70a792ad-74b6-3f67-9674-f3c1e8aad7c6.json
deleted file mode 100644
index 5ce3ddd..0000000
--- a/test/data/enm/study-FCSV-70a792ad-74b6-3f67-9674-f3c1e8aad7c6.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-70a792ad-74b6-3f67-9674-f3c1e8aad7c6",
- "owner": {
- "substance": {
- "uuid": "FCSV-6046fc9f-3c73-3215-97e2-4ddcf85f41da"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.193,
- "errQualifier": "sd",
- "errorValue": 0.011
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -2.371,
- "errQualifier": "std",
- "errorValue": 0.08
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-70cbd060-4493-388e-bba2-1cbad17079f5.json b/test/data/enm/study-FCSV-70cbd060-4493-388e-bba2-1cbad17079f5.json
deleted file mode 100644
index 6071ba0..0000000
--- a/test/data/enm/study-FCSV-70cbd060-4493-388e-bba2-1cbad17079f5.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-70cbd060-4493-388e-bba2-1cbad17079f5",
- "owner": {
- "substance": {
- "uuid": "FCSV-de6203a6-aea6-3910-8f49-598f80ab6a17"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.012,
- "errQualifier": "sd",
- "errorValue": 0.005
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -6.361,
- "errQualifier": "std",
- "errorValue": 0.536
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-712f4ae1-fefc-3f8b-b439-a14ecc8625fe.json b/test/data/enm/study-FCSV-712f4ae1-fefc-3f8b-b439-a14ecc8625fe.json
deleted file mode 100644
index 9f72f6a..0000000
--- a/test/data/enm/study-FCSV-712f4ae1-fefc-3f8b-b439-a14ecc8625fe.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-712f4ae1-fefc-3f8b-b439-a14ecc8625fe",
- "owner": {
- "substance": {
- "uuid": "FCSV-47e98c51-7508-362f-84d3-494bb124b849"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-71403565-16f9-3b91-a3d3-fd77c58275c2.json b/test/data/enm/study-FCSV-71403565-16f9-3b91-a3d3-fd77c58275c2.json
deleted file mode 100644
index 68ac8a1..0000000
--- a/test/data/enm/study-FCSV-71403565-16f9-3b91-a3d3-fd77c58275c2.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-71403565-16f9-3b91-a3d3-fd77c58275c2",
- "owner": {
- "substance": {
- "uuid": "FCSV-064f1803-3b9e-3f44-a5f6-60b1f573830c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.117,
- "errQualifier": "sd",
- "errorValue": 0.023
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.135,
- "errQualifier": "sd",
- "errorValue": 0.024
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7143d40f-0049-3b86-85f8-1f15bd5ad1ae.json b/test/data/enm/study-FCSV-7143d40f-0049-3b86-85f8-1f15bd5ad1ae.json
deleted file mode 100644
index dbab939..0000000
--- a/test/data/enm/study-FCSV-7143d40f-0049-3b86-85f8-1f15bd5ad1ae.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-7143d40f-0049-3b86-85f8-1f15bd5ad1ae",
- "owner": {
- "substance": {
- "uuid": "FCSV-8e1a76df-a12d-3254-ae6b-28e20153ef59"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-716d33aa-c723-3bf1-8f78-01da0b01dc45.json b/test/data/enm/study-FCSV-716d33aa-c723-3bf1-8f78-01da0b01dc45.json
deleted file mode 100644
index 2e14545..0000000
--- a/test/data/enm/study-FCSV-716d33aa-c723-3bf1-8f78-01da0b01dc45.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-716d33aa-c723-3bf1-8f78-01da0b01dc45",
- "owner": {
- "substance": {
- "uuid": "FCSV-07629748-9b8e-381b-a4e6-79b495404e02"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 38.4,
- "errQualifier": "sd",
- "errorValue": 2.5
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 10.5
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 108
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7185f2de-6b95-3e4d-8652-3cafa86921d6.json b/test/data/enm/study-FCSV-7185f2de-6b95-3e4d-8652-3cafa86921d6.json
deleted file mode 100644
index 3468608..0000000
--- a/test/data/enm/study-FCSV-7185f2de-6b95-3e4d-8652-3cafa86921d6.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-7185f2de-6b95-3e4d-8652-3cafa86921d6",
- "owner": {
- "substance": {
- "uuid": "FCSV-1180669a-fc30-3bc1-b53e-6a200c4248e4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.15,
- "errQualifier": "sd",
- "errorValue": 0.052
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.145,
- "errQualifier": "sd",
- "errorValue": 0.016
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7196d661-ce69-3127-85c0-1b89f2a42669.json b/test/data/enm/study-FCSV-7196d661-ce69-3127-85c0-1b89f2a42669.json
deleted file mode 100644
index 9f63486..0000000
--- a/test/data/enm/study-FCSV-7196d661-ce69-3127-85c0-1b89f2a42669.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-7196d661-ce69-3127-85c0-1b89f2a42669",
- "owner": {
- "substance": {
- "uuid": "FCSV-8619e6db-2c01-389e-b05b-e75273d18359"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "1-Dodecanethiol"
- }
- },
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "1,2-dioleoyl-3-trimethylammonium-propane"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-720913c2-ed87-37c1-82a6-73b202c7447e.json b/test/data/enm/study-FCSV-720913c2-ed87-37c1-82a6-73b202c7447e.json
deleted file mode 100644
index c8bbc05..0000000
--- a/test/data/enm/study-FCSV-720913c2-ed87-37c1-82a6-73b202c7447e.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-720913c2-ed87-37c1-82a6-73b202c7447e",
- "owner": {
- "substance": {
- "uuid": "FCSV-815715e8-0cc8-3641-897c-4530d961cfe0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "5,5'-Dithiobis(2-nitrobenzoic acid)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-721d7077-a0e8-3e0b-8de8-bd1f79781b11.json b/test/data/enm/study-FCSV-721d7077-a0e8-3e0b-8de8-bd1f79781b11.json
deleted file mode 100644
index ef3a2df..0000000
--- a/test/data/enm/study-FCSV-721d7077-a0e8-3e0b-8de8-bd1f79781b11.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-721d7077-a0e8-3e0b-8de8-bd1f79781b11",
- "owner": {
- "substance": {
- "uuid": "FCSV-924a51b9-97d3-31fb-b289-52688d9d0d3c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 23.19,
- "errQualifier": "sd",
- "errorValue": 0.31
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 52.42,
- "errQualifier": "sd",
- "errorValue": 6.2
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 21.04,
- "errQualifier": "sd",
- "errorValue": 1.45
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 50.9,
- "errQualifier": "sd",
- "errorValue": 37.02
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 28.2,
- "errQualifier": "sd",
- "errorValue": 1.37
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 26.57,
- "errQualifier": "sd",
- "errorValue": 2.42
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 28.2,
- "errQualifier": "sd",
- "errorValue": 6.32
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 72.7,
- "errQualifier": "sd",
- "errorValue": 18.75
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-724d3a48-2f29-3361-803d-93750c154247.json b/test/data/enm/study-FCSV-724d3a48-2f29-3361-803d-93750c154247.json
deleted file mode 100644
index eecb282..0000000
--- a/test/data/enm/study-FCSV-724d3a48-2f29-3361-803d-93750c154247.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-724d3a48-2f29-3361-803d-93750c154247",
- "owner": {
- "substance": {
- "uuid": "FCSV-a7dbc5da-6ccd-3df5-b2f1-467f625a08cb"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Ag]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-731a8e92-4d44-35ac-a1cb-4a4a2eb80695.json b/test/data/enm/study-FCSV-731a8e92-4d44-35ac-a1cb-4a4a2eb80695.json
deleted file mode 100644
index ef5efa8..0000000
--- a/test/data/enm/study-FCSV-731a8e92-4d44-35ac-a1cb-4a4a2eb80695.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-731a8e92-4d44-35ac-a1cb-4a4a2eb80695",
- "owner": {
- "substance": {
- "uuid": "FCSV-2de5071e-596b-3507-84fc-f9ba470cbcbf"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.512,
- "errQualifier": "sd",
- "errorValue": 0.049
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -0.966,
- "errQualifier": "std",
- "errorValue": 0.139
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-734de921-ea52-3f39-be90-a2013982e9a8.json b/test/data/enm/study-FCSV-734de921-ea52-3f39-be90-a2013982e9a8.json
deleted file mode 100644
index 5daf1e0..0000000
--- a/test/data/enm/study-FCSV-734de921-ea52-3f39-be90-a2013982e9a8.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-734de921-ea52-3f39-be90-a2013982e9a8",
- "owner": {
- "substance": {
- "uuid": "FCSV-815715e8-0cc8-3641-897c-4530d961cfe0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 920.341,
- "errQualifier": "sd",
- "errorValue": 82.988
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.018
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7413aec1-5b0b-383c-bc90-68f68d60abf6.json b/test/data/enm/study-FCSV-7413aec1-5b0b-383c-bc90-68f68d60abf6.json
deleted file mode 100644
index 7d18dbc..0000000
--- a/test/data/enm/study-FCSV-7413aec1-5b0b-383c-bc90-68f68d60abf6.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-7413aec1-5b0b-383c-bc90-68f68d60abf6",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f0e4035-24d4-3a81-b20b-bd156f210616"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "4-Mercaptobenzoic acid"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-74308f06-e7be-3c61-87cb-a3cad3fa240b.json b/test/data/enm/study-FCSV-74308f06-e7be-3c61-87cb-a3cad3fa240b.json
deleted file mode 100644
index 95575f2..0000000
--- a/test/data/enm/study-FCSV-74308f06-e7be-3c61-87cb-a3cad3fa240b.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-74308f06-e7be-3c61-87cb-a3cad3fa240b",
- "owner": {
- "substance": {
- "uuid": "FCSV-98074b22-064e-3cd7-a732-f5fa3005fa73"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "1-Dodecanethiol"
- }
- },
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "1,2-dioleoyl-3-trimethylammonium-propane"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-750044f2-f204-3f01-9bd3-5c93cacd2bbb.json b/test/data/enm/study-FCSV-750044f2-f204-3f01-9bd3-5c93cacd2bbb.json
deleted file mode 100644
index 6195b4f..0000000
--- a/test/data/enm/study-FCSV-750044f2-f204-3f01-9bd3-5c93cacd2bbb.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-750044f2-f204-3f01-9bd3-5c93cacd2bbb",
- "owner": {
- "substance": {
- "uuid": "FCSV-98074b22-064e-3cd7-a732-f5fa3005fa73"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7507e3d6-3bcd-37ca-9c59-5e7ac2fb900d.json b/test/data/enm/study-FCSV-7507e3d6-3bcd-37ca-9c59-5e7ac2fb900d.json
deleted file mode 100644
index 7758039..0000000
--- a/test/data/enm/study-FCSV-7507e3d6-3bcd-37ca-9c59-5e7ac2fb900d.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-7507e3d6-3bcd-37ca-9c59-5e7ac2fb900d",
- "owner": {
- "substance": {
- "uuid": "FCSV-1a71d2b3-8121-3790-a66b-774b12829bb3"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -24.32,
- "errQualifier": "sd",
- "errorValue": 3.83
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -10.42,
- "errQualifier": "sd",
- "errorValue": 0.51
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-752fbf26-da7a-31b7-8f87-45a0ee7121c5.json b/test/data/enm/study-FCSV-752fbf26-da7a-31b7-8f87-45a0ee7121c5.json
deleted file mode 100644
index 0e09876..0000000
--- a/test/data/enm/study-FCSV-752fbf26-da7a-31b7-8f87-45a0ee7121c5.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-752fbf26-da7a-31b7-8f87-45a0ee7121c5",
- "owner": {
- "substance": {
- "uuid": "FCSV-62d68a47-f27e-3d76-a7cf-5cacae221ec7"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 38.4,
- "errQualifier": "sd",
- "errorValue": 2.5
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 10.5
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 108
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7542714c-ef5e-3cb3-8195-ccb9efc6d05f.json b/test/data/enm/study-FCSV-7542714c-ef5e-3cb3-8195-ccb9efc6d05f.json
deleted file mode 100644
index 7981d0b..0000000
--- a/test/data/enm/study-FCSV-7542714c-ef5e-3cb3-8195-ccb9efc6d05f.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-7542714c-ef5e-3cb3-8195-ccb9efc6d05f",
- "owner": {
- "substance": {
- "uuid": "FCSV-a3c8dce5-07ab-3ca6-91a0-84072fc24aed"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Thiolated L-glycine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-75aa3277-03c5-3898-bfed-19d5066987c6.json b/test/data/enm/study-FCSV-75aa3277-03c5-3898-bfed-19d5066987c6.json
deleted file mode 100644
index 0304b19..0000000
--- a/test/data/enm/study-FCSV-75aa3277-03c5-3898-bfed-19d5066987c6.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-75aa3277-03c5-3898-bfed-19d5066987c6",
- "owner": {
- "substance": {
- "uuid": "FCSV-0542c513-7015-3169-a1c1-e00f811a7ba0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "2-Naphthalenethiol"
- }
- },
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Pluronic F-127"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-75c71d42-9d36-3ad8-9fff-f511a4e2d183.json b/test/data/enm/study-FCSV-75c71d42-9d36-3ad8-9fff-f511a4e2d183.json
deleted file mode 100644
index c257dd6..0000000
--- a/test/data/enm/study-FCSV-75c71d42-9d36-3ad8-9fff-f511a4e2d183.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-75c71d42-9d36-3ad8-9fff-f511a4e2d183",
- "owner": {
- "substance": {
- "uuid": "FCSV-cf1d4fd3-f16b-3680-96fa-0f5e4b9dd485"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
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- }
- },
- "result": {
- "unit": null,
- "textValue": "2-Naphthalenethiol"
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- },
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- "textValue": "deoxycholic acid"
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- ]
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diff --git a/test/data/enm/study-FCSV-75c73aaf-bc0e-35b7-bd73-37677f9599ef.json b/test/data/enm/study-FCSV-75c73aaf-bc0e-35b7-bd73-37677f9599ef.json
deleted file mode 100644
index 517a04b..0000000
--- a/test/data/enm/study-FCSV-75c73aaf-bc0e-35b7-bd73-37677f9599ef.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-75c73aaf-bc0e-35b7-bd73-37677f9599ef",
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- },
- "parameters": {
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- },
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- "loQualifier": "mean",
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- {
- "endpoint": "ZETA POTENTIAL",
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- },
- "result": {
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diff --git a/test/data/enm/study-FCSV-75d46838-d5d8-33ff-bc6e-9fdce01e9ac7.json b/test/data/enm/study-FCSV-75d46838-d5d8-33ff-bc6e-9fdce01e9ac7.json
deleted file mode 100644
index 25bb6ab..0000000
--- a/test/data/enm/study-FCSV-75d46838-d5d8-33ff-bc6e-9fdce01e9ac7.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-75d46838-d5d8-33ff-bc6e-9fdce01e9ac7",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
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- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- "parameters": {
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- "loQualifier": "mean",
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- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
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- "result": {
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- "loQualifier": "mean",
- "loValue": 0.406,
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- "errorValue": 0.024
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- {
- "endpoint": "LSPR peak position (nm)",
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- "result": {
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diff --git a/test/data/enm/study-FCSV-75f3ba92-e829-3e5e-95b0-26a9d5193758.json b/test/data/enm/study-FCSV-75f3ba92-e829-3e5e-95b0-26a9d5193758.json
deleted file mode 100644
index b11bd91..0000000
--- a/test/data/enm/study-FCSV-75f3ba92-e829-3e5e-95b0-26a9d5193758.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-75f3ba92-e829-3e5e-95b0-26a9d5193758",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
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- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
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- "endpoint": "Absorbance.spectrophotometry.AS.",
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- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
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- "MEDIUM": "Human serum (Sigma #H4522)"
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- "result": {
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- "loQualifier": "mean",
- "loValue": 0.363,
- "errQualifier": "sd",
- "errorValue": 0.026
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- "endpoint": "LSPR peak position (nm)",
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diff --git a/test/data/enm/study-FCSV-767c46cb-7c86-3a9a-a191-6b5978e6b683.json b/test/data/enm/study-FCSV-767c46cb-7c86-3a9a-a191-6b5978e6b683.json
deleted file mode 100644
index 5ecc6bd..0000000
--- a/test/data/enm/study-FCSV-767c46cb-7c86-3a9a-a191-6b5978e6b683.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-767c46cb-7c86-3a9a-a191-6b5978e6b683",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
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- "endpoint": "Ellman depletion assay",
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- "parameters": {
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- "MEDIUM": "Human serum (Sigma #H4522)"
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- "result": {
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- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
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- "result": {
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- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 1
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- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
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diff --git a/test/data/enm/study-FCSV-76a0902a-02f1-33e2-9559-b46d739fa17f.json b/test/data/enm/study-FCSV-76a0902a-02f1-33e2-9559-b46d739fa17f.json
deleted file mode 100644
index aff7fef..0000000
--- a/test/data/enm/study-FCSV-76a0902a-02f1-33e2-9559-b46d739fa17f.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-76a0902a-02f1-33e2-9559-b46d739fa17f",
- "owner": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
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- "TYPE": {
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- }
- },
- "result": {
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- "textValue": "Mercaptosuccinic acid"
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diff --git a/test/data/enm/study-FCSV-76b49c06-bbc6-34fc-89b4-d478fdf2b776.json b/test/data/enm/study-FCSV-76b49c06-bbc6-34fc-89b4-d478fdf2b776.json
deleted file mode 100644
index 85f5098..0000000
--- a/test/data/enm/study-FCSV-76b49c06-bbc6-34fc-89b4-d478fdf2b776.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-76b49c06-bbc6-34fc-89b4-d478fdf2b776",
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- }
- },
- "citation": {
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- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
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- "parameters": {
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- {
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- "MEDIUM": "Human serum (Sigma #H4522)"
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- "result": {
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- "loQualifier": "mean",
- "loValue": 0.226,
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diff --git a/test/data/enm/study-FCSV-76caca13-6e02-3b29-873f-805f6b81c240.json b/test/data/enm/study-FCSV-76caca13-6e02-3b29-873f-805f6b81c240.json
deleted file mode 100644
index d8b7f10..0000000
--- a/test/data/enm/study-FCSV-76caca13-6e02-3b29-873f-805f6b81c240.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-76caca13-6e02-3b29-873f-805f6b81c240",
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- },
- "citation": {
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- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
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- "result": {
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diff --git a/test/data/enm/study-FCSV-76ed4304-f6aa-37e2-8ec4-187a87535481.json b/test/data/enm/study-FCSV-76ed4304-f6aa-37e2-8ec4-187a87535481.json
deleted file mode 100644
index 4e95fda..0000000
--- a/test/data/enm/study-FCSV-76ed4304-f6aa-37e2-8ec4-187a87535481.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-76ed4304-f6aa-37e2-8ec4-187a87535481",
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- }
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- "citation": {
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- "year": "2014",
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- },
- "protocol": {
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- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- "parameters": {
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- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.268,
- "errQualifier": "sd",
- "errorValue": 0.089
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.346,
- "errQualifier": "sd",
- "errorValue": 0.017
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-772e534d-b8fe-32c3-9616-76376bec6dc2.json b/test/data/enm/study-FCSV-772e534d-b8fe-32c3-9616-76376bec6dc2.json
deleted file mode 100644
index 2a82a8d..0000000
--- a/test/data/enm/study-FCSV-772e534d-b8fe-32c3-9616-76376bec6dc2.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-772e534d-b8fe-32c3-9616-76376bec6dc2",
- "owner": {
- "substance": {
- "uuid": "FCSV-70406142-0fd6-30bd-873b-5cce39016ed5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7733f892-ba42-3472-a45f-fc77bb15e75e.json b/test/data/enm/study-FCSV-7733f892-ba42-3472-a45f-fc77bb15e75e.json
deleted file mode 100644
index 34fad60..0000000
--- a/test/data/enm/study-FCSV-7733f892-ba42-3472-a45f-fc77bb15e75e.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-7733f892-ba42-3472-a45f-fc77bb15e75e",
- "owner": {
- "substance": {
- "uuid": "FCSV-9e599ca9-9a8f-3094-a97b-3fb35b08a82a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-77516e1f-3799-3677-b696-03cd9aa64aa9.json b/test/data/enm/study-FCSV-77516e1f-3799-3677-b696-03cd9aa64aa9.json
deleted file mode 100644
index fcd1d77..0000000
--- a/test/data/enm/study-FCSV-77516e1f-3799-3677-b696-03cd9aa64aa9.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-77516e1f-3799-3677-b696-03cd9aa64aa9",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc2c755f-9eee-30e3-9e98-1fbb2397c980"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -32.67,
- "errQualifier": "sd",
- "errorValue": 3.23
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -9.41,
- "errQualifier": "sd",
- "errorValue": 0.84
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7776d5f6-965f-3fd1-9e94-237b5563cb9c.json b/test/data/enm/study-FCSV-7776d5f6-965f-3fd1-9e94-237b5563cb9c.json
deleted file mode 100644
index 2f616a9..0000000
--- a/test/data/enm/study-FCSV-7776d5f6-965f-3fd1-9e94-237b5563cb9c.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-7776d5f6-965f-3fd1-9e94-237b5563cb9c",
- "owner": {
- "substance": {
- "uuid": "FCSV-bfa499a9-7d1a-34da-bccf-4fc30c65f03d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
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- },
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.014,
- "errQualifier": "sd",
- "errorValue": 0.004
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -6.168,
- "errQualifier": "std",
- "errorValue": 0.459
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-77aa28d9-f7ea-3277-85ca-497343c06271.json b/test/data/enm/study-FCSV-77aa28d9-f7ea-3277-85ca-497343c06271.json
deleted file mode 100644
index 01a639f..0000000
--- a/test/data/enm/study-FCSV-77aa28d9-f7ea-3277-85ca-497343c06271.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-77aa28d9-f7ea-3277-85ca-497343c06271",
- "owner": {
- "substance": {
- "uuid": "FCSV-63da0f0e-51b8-3c56-b5d3-d4e0e9fb06a6"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
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- "effects": [
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- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
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- "result": {
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- "loQualifier": "mean",
- "loValue": 0.213,
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- "errorValue": 0.006
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- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
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- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.216,
- "errQualifier": "sd",
- "errorValue": 0.014
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
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- "result": {
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- "loQualifier": "mean",
- "loValue": 523.6,
- "errQualifier": "sd",
- "errorValue": 0.26
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- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-77f96919-40cc-3bbf-804c-7c8427569d7b.json b/test/data/enm/study-FCSV-77f96919-40cc-3bbf-804c-7c8427569d7b.json
deleted file mode 100644
index c34a983..0000000
--- a/test/data/enm/study-FCSV-77f96919-40cc-3bbf-804c-7c8427569d7b.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-77f96919-40cc-3bbf-804c-7c8427569d7b",
- "owner": {
- "substance": {
- "uuid": "FCSV-d677545a-5079-3793-8990-4061a6b254c5"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- },
- "effects": [
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- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
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- "result": {
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- "loQualifier": "mean",
- "loValue": 0.251,
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- "errorValue": 0.016
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- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.28,
- "errQualifier": "sd",
- "errorValue": 0.051
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 520.6,
- "errQualifier": "sd",
- "errorValue": 0.26
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-77fa974c-9bc7-3b39-8140-91dc2bb3a721.json b/test/data/enm/study-FCSV-77fa974c-9bc7-3b39-8140-91dc2bb3a721.json
deleted file mode 100644
index 708b13b..0000000
--- a/test/data/enm/study-FCSV-77fa974c-9bc7-3b39-8140-91dc2bb3a721.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-77fa974c-9bc7-3b39-8140-91dc2bb3a721",
- "owner": {
- "substance": {
- "uuid": "FCSV-6046fc9f-3c73-3215-97e2-4ddcf85f41da"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Ag]"
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- ]
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diff --git a/test/data/enm/study-FCSV-78014983-6e4c-3039-8233-f52b36e3816c.json b/test/data/enm/study-FCSV-78014983-6e4c-3039-8233-f52b36e3816c.json
deleted file mode 100644
index db30e5c..0000000
--- a/test/data/enm/study-FCSV-78014983-6e4c-3039-8233-f52b36e3816c.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-78014983-6e4c-3039-8233-f52b36e3816c",
- "owner": {
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- "uuid": "FCSV-6d8b8701-7fca-3936-a45e-66c17012fc75"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
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- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
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- },
- "effects": [
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- "endpoint": "Core size",
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
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- "loValue": 59.3,
- "errQualifier": "sd",
- "errorValue": 6.4
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
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- {
- "endpoint": "Mol/NP",
- "conditions": {
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- "Remark": null,
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- "result": {
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- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
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- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-78a6ca2d-282e-39ec-bae2-14ba7410c7a6.json b/test/data/enm/study-FCSV-78a6ca2d-282e-39ec-bae2-14ba7410c7a6.json
deleted file mode 100644
index b5672ec..0000000
--- a/test/data/enm/study-FCSV-78a6ca2d-282e-39ec-bae2-14ba7410c7a6.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-78a6ca2d-282e-39ec-bae2-14ba7410c7a6",
- "owner": {
- "substance": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
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- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
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- "interpretation": {
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- "effects": [
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- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 740.019,
- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 8,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
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diff --git a/test/data/enm/study-FCSV-790270a0-1103-3838-b280-d0f295d4e880.json b/test/data/enm/study-FCSV-790270a0-1103-3838-b280-d0f295d4e880.json
deleted file mode 100644
index 410a545..0000000
--- a/test/data/enm/study-FCSV-790270a0-1103-3838-b280-d0f295d4e880.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-790270a0-1103-3838-b280-d0f295d4e880",
- "owner": {
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- "uuid": "FCSV-45779e93-a25d-39cc-9294-afc0b59f3cd6"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
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- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
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- "result": {
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- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
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diff --git a/test/data/enm/study-FCSV-791da911-0b17-328e-8c2a-957ed2816bd8.json b/test/data/enm/study-FCSV-791da911-0b17-328e-8c2a-957ed2816bd8.json
deleted file mode 100644
index 7c50c65..0000000
--- a/test/data/enm/study-FCSV-791da911-0b17-328e-8c2a-957ed2816bd8.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-791da911-0b17-328e-8c2a-957ed2816bd8",
- "owner": {
- "substance": {
- "uuid": "FCSV-70406142-0fd6-30bd-873b-5cce39016ed5"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.104,
- "errQualifier": "sd",
- "errorValue": 0.019
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.073,
- "errQualifier": "sd",
- "errorValue": 0.008
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-79703470-8cf6-3ec3-8d17-15acfcdbddd3.json b/test/data/enm/study-FCSV-79703470-8cf6-3ec3-8d17-15acfcdbddd3.json
deleted file mode 100644
index a04467c..0000000
--- a/test/data/enm/study-FCSV-79703470-8cf6-3ec3-8d17-15acfcdbddd3.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-79703470-8cf6-3ec3-8d17-15acfcdbddd3",
- "owner": {
- "substance": {
- "uuid": "FCSV-8e1a76df-a12d-3254-ae6b-28e20153ef59"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 1.224,
- "errQualifier": "sd",
- "errorValue": 0.373
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-79c7384b-50cf-34bb-a09b-6b59e6adc2eb.json b/test/data/enm/study-FCSV-79c7384b-50cf-34bb-a09b-6b59e6adc2eb.json
deleted file mode 100644
index b8b74e8..0000000
--- a/test/data/enm/study-FCSV-79c7384b-50cf-34bb-a09b-6b59e6adc2eb.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-79c7384b-50cf-34bb-a09b-6b59e6adc2eb",
- "owner": {
- "substance": {
- "uuid": "FCSV-a4df7f03-50e1-387c-b0b7-2ce62ed03a8c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 43.5,
- "errQualifier": "sd",
- "errorValue": 1.32
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 61.31,
- "errQualifier": "sd",
- "errorValue": 2.73
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 43.38,
- "errQualifier": "sd",
- "errorValue": 1.16
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 26.43,
- "errQualifier": "sd",
- "errorValue": 6.56
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 45.82,
- "errQualifier": "sd",
- "errorValue": 1.1
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 21.39,
- "errQualifier": "sd",
- "errorValue": 5.91
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 45.82,
- "errQualifier": "sd",
- "errorValue": 1.29
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 73.4,
- "errQualifier": "sd",
- "errorValue": 3.46
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-79daeec1-8b85-3cef-ac66-ff0c58d4ac9c.json b/test/data/enm/study-FCSV-79daeec1-8b85-3cef-ac66-ff0c58d4ac9c.json
deleted file mode 100644
index 689285f..0000000
--- a/test/data/enm/study-FCSV-79daeec1-8b85-3cef-ac66-ff0c58d4ac9c.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-79daeec1-8b85-3cef-ac66-ff0c58d4ac9c",
- "owner": {
- "substance": {
- "uuid": "FCSV-8b5b62c3-7fd2-3bba-b293-b7537e4971b1"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 59.3,
- "errQualifier": "sd",
- "errorValue": 6.4
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7a2c3377-7224-39ae-840b-0ff841aec760.json b/test/data/enm/study-FCSV-7a2c3377-7224-39ae-840b-0ff841aec760.json
deleted file mode 100644
index 24d7ff4..0000000
--- a/test/data/enm/study-FCSV-7a2c3377-7224-39ae-840b-0ff841aec760.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-7a2c3377-7224-39ae-840b-0ff841aec760",
- "owner": {
- "substance": {
- "uuid": "FCSV-1180669a-fc30-3bc1-b53e-6a200c4248e4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Thiolated L-tryptophan"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7a3aa724-b876-3485-9aab-a2467298b98a.json b/test/data/enm/study-FCSV-7a3aa724-b876-3485-9aab-a2467298b98a.json
deleted file mode 100644
index 2fd0340..0000000
--- a/test/data/enm/study-FCSV-7a3aa724-b876-3485-9aab-a2467298b98a.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-7a3aa724-b876-3485-9aab-a2467298b98a",
- "owner": {
- "substance": {
- "uuid": "FCSV-bdd4c371-ffec-34f1-ae5b-2c60d243e867"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 838.439,
- "errQualifier": "sd",
- "errorValue": 56.096
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.022
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7ae480fc-a523-32c5-9c5e-ade30e7f4d05.json b/test/data/enm/study-FCSV-7ae480fc-a523-32c5-9c5e-ade30e7f4d05.json
deleted file mode 100644
index 870b6b4..0000000
--- a/test/data/enm/study-FCSV-7ae480fc-a523-32c5-9c5e-ade30e7f4d05.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-7ae480fc-a523-32c5-9c5e-ade30e7f4d05",
- "owner": {
- "substance": {
- "uuid": "FCSV-9294730f-3d55-36da-80b9-eb2df162e805"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.419,
- "errQualifier": "sd",
- "errorValue": 0.137
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.421,
- "errQualifier": "sd",
- "errorValue": 0.101
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7af90c89-bbfc-3449-877c-ebddb21613d9.json b/test/data/enm/study-FCSV-7af90c89-bbfc-3449-877c-ebddb21613d9.json
deleted file mode 100644
index 18eb9f9..0000000
--- a/test/data/enm/study-FCSV-7af90c89-bbfc-3449-877c-ebddb21613d9.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-7af90c89-bbfc-3449-877c-ebddb21613d9",
- "owner": {
- "substance": {
- "uuid": "FCSV-9505d90b-f90b-3c94-a6cc-e4ee4c8ec46f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7b0bd50a-c9fc-3179-8446-a3040a6be223.json b/test/data/enm/study-FCSV-7b0bd50a-c9fc-3179-8446-a3040a6be223.json
deleted file mode 100644
index 3a0011e..0000000
--- a/test/data/enm/study-FCSV-7b0bd50a-c9fc-3179-8446-a3040a6be223.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-7b0bd50a-c9fc-3179-8446-a3040a6be223",
- "owner": {
- "substance": {
- "uuid": "FCSV-a7dbc5da-6ccd-3df5-b2f1-467f625a08cb"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.044,
- "errQualifier": "sd",
- "errorValue": 0.004
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -4.491,
- "errQualifier": "std",
- "errorValue": 0.128
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7b45b7b6-7ad3-3209-9858-50696b275a24.json b/test/data/enm/study-FCSV-7b45b7b6-7ad3-3209-9858-50696b275a24.json
deleted file mode 100644
index 8802685..0000000
--- a/test/data/enm/study-FCSV-7b45b7b6-7ad3-3209-9858-50696b275a24.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-7b45b7b6-7ad3-3209-9858-50696b275a24",
- "owner": {
- "substance": {
- "uuid": "FCSV-98074b22-064e-3cd7-a732-f5fa3005fa73"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.81,
- "errQualifier": "sd",
- "errorValue": 0.033
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -0.303,
- "errQualifier": "std",
- "errorValue": 0.059
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7b91e6c5-8d52-348d-a130-4186f772b200.json b/test/data/enm/study-FCSV-7b91e6c5-8d52-348d-a130-4186f772b200.json
deleted file mode 100644
index 52f94b3..0000000
--- a/test/data/enm/study-FCSV-7b91e6c5-8d52-348d-a130-4186f772b200.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-7b91e6c5-8d52-348d-a130-4186f772b200",
- "owner": {
- "substance": {
- "uuid": "FCSV-c975883b-640e-38a6-aabe-7596e3abcd95"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
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- "effects": [
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- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "2-Naphthalenethiol"
- }
- },
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "ethylenediamine-modified poly(styrene-co-maleic anhydride)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7b92d52d-73ce-318d-a2dc-2c5e622ef751.json b/test/data/enm/study-FCSV-7b92d52d-73ce-318d-a2dc-2c5e622ef751.json
deleted file mode 100644
index 2bee896..0000000
--- a/test/data/enm/study-FCSV-7b92d52d-73ce-318d-a2dc-2c5e622ef751.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-7b92d52d-73ce-318d-a2dc-2c5e622ef751",
- "owner": {
- "substance": {
- "uuid": "FCSV-1842b3a2-413c-327c-a07a-9905269bafb5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
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- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7bc40f11-cb13-3718-89ae-abaf405b2205.json b/test/data/enm/study-FCSV-7bc40f11-cb13-3718-89ae-abaf405b2205.json
deleted file mode 100644
index 38b6441..0000000
--- a/test/data/enm/study-FCSV-7bc40f11-cb13-3718-89ae-abaf405b2205.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-7bc40f11-cb13-3718-89ae-abaf405b2205",
- "owner": {
- "substance": {
- "uuid": "FCSV-ff7e8515-cfad-3d76-a918-d6eeab10a91d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 3.58,
- "errQualifier": "sd",
- "errorValue": 0.74
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7bd0309d-5ae2-35d7-a4bd-88d3715b325e.json b/test/data/enm/study-FCSV-7bd0309d-5ae2-35d7-a4bd-88d3715b325e.json
deleted file mode 100644
index ffc49a8..0000000
--- a/test/data/enm/study-FCSV-7bd0309d-5ae2-35d7-a4bd-88d3715b325e.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-7bd0309d-5ae2-35d7-a4bd-88d3715b325e",
- "owner": {
- "substance": {
- "uuid": "FCSV-a4df7f03-50e1-387c-b0b7-2ce62ed03a8c"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.027,
- "errQualifier": "sd",
- "errorValue": 0.007
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -5.229,
- "errQualifier": "std",
- "errorValue": 0.397
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7bf4ba9e-0b86-3002-b637-999a9b919fbc.json b/test/data/enm/study-FCSV-7bf4ba9e-0b86-3002-b637-999a9b919fbc.json
deleted file mode 100644
index 9542146..0000000
--- a/test/data/enm/study-FCSV-7bf4ba9e-0b86-3002-b637-999a9b919fbc.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-7bf4ba9e-0b86-3002-b637-999a9b919fbc",
- "owner": {
- "substance": {
- "uuid": "FCSV-4683cde2-ec2e-3a2e-974a-3ba15cd79d05"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
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- "effects": [
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 38.4,
- "errQualifier": "sd",
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- }
- },
- {
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- "conditions": {
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 10.5
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 108
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7c03ab92-8335-3eb3-9c74-c121c57c4f01.json b/test/data/enm/study-FCSV-7c03ab92-8335-3eb3-9c74-c121c57c4f01.json
deleted file mode 100644
index 03201eb..0000000
--- a/test/data/enm/study-FCSV-7c03ab92-8335-3eb3-9c74-c121c57c4f01.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-7c03ab92-8335-3eb3-9c74-c121c57c4f01",
- "owner": {
- "substance": {
- "uuid": "FCSV-7087aac7-6f1d-320f-bfde-5897fe91af64"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- "effects": [
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- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7c3db675-33fb-360b-adaa-8750da2161f5.json b/test/data/enm/study-FCSV-7c3db675-33fb-360b-adaa-8750da2161f5.json
deleted file mode 100644
index 7dae4d7..0000000
--- a/test/data/enm/study-FCSV-7c3db675-33fb-360b-adaa-8750da2161f5.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-7c3db675-33fb-360b-adaa-8750da2161f5",
- "owner": {
- "substance": {
- "uuid": "FCSV-ee07f574-0b80-31db-b1f2-535f6d6626b0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -7.62,
- "errQualifier": "sd",
- "errorValue": 1.52
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -8.07,
- "errQualifier": "sd",
- "errorValue": 4.16
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7c63057e-bf36-3f70-98cc-4b086bea62fc.json b/test/data/enm/study-FCSV-7c63057e-bf36-3f70-98cc-4b086bea62fc.json
deleted file mode 100644
index b262d88..0000000
--- a/test/data/enm/study-FCSV-7c63057e-bf36-3f70-98cc-4b086bea62fc.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-7c63057e-bf36-3f70-98cc-4b086bea62fc",
- "owner": {
- "substance": {
- "uuid": "FCSV-93c29ebf-e80e-354c-893f-923385c72858"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7c69c82b-0187-37ff-9a00-50f186402d6c.json b/test/data/enm/study-FCSV-7c69c82b-0187-37ff-9a00-50f186402d6c.json
deleted file mode 100644
index 44e32a5..0000000
--- a/test/data/enm/study-FCSV-7c69c82b-0187-37ff-9a00-50f186402d6c.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-7c69c82b-0187-37ff-9a00-50f186402d6c",
- "owner": {
- "substance": {
- "uuid": "FCSV-70406142-0fd6-30bd-873b-5cce39016ed5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 837.337,
- "errQualifier": "sd",
- "errorValue": 51.657
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.035
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7ccd41a4-c6bb-3039-a9b0-9bd92e2051fd.json b/test/data/enm/study-FCSV-7ccd41a4-c6bb-3039-a9b0-9bd92e2051fd.json
deleted file mode 100644
index dbdf18c..0000000
--- a/test/data/enm/study-FCSV-7ccd41a4-c6bb-3039-a9b0-9bd92e2051fd.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-7ccd41a4-c6bb-3039-a9b0-9bd92e2051fd",
- "owner": {
- "substance": {
- "uuid": "FCSV-924a51b9-97d3-31fb-b289-52688d9d0d3c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7cd49681-3606-306c-b7a5-bb74b11c5f03.json b/test/data/enm/study-FCSV-7cd49681-3606-306c-b7a5-bb74b11c5f03.json
deleted file mode 100644
index 8916549..0000000
--- a/test/data/enm/study-FCSV-7cd49681-3606-306c-b7a5-bb74b11c5f03.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-7cd49681-3606-306c-b7a5-bb74b11c5f03",
- "owner": {
- "substance": {
- "uuid": "FCSV-93c29ebf-e80e-354c-893f-923385c72858"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 49.22,
- "errQualifier": "sd",
- "errorValue": 35.05
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 61.86,
- "errQualifier": "sd",
- "errorValue": 9.35
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 29.15,
- "errQualifier": "sd",
- "errorValue": 14.6
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 28.51,
- "errQualifier": "sd",
- "errorValue": 9.27
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 72.5,
- "errQualifier": "sd",
- "errorValue": 2.74
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 21.05,
- "errQualifier": "sd",
- "errorValue": 3.79
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 72.5,
- "errQualifier": "sd",
- "errorValue": 26.69
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 83.75,
- "errQualifier": "sd",
- "errorValue": 5.69
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7d043672-8f5a-35e0-9c7e-98ece0083ed1.json b/test/data/enm/study-FCSV-7d043672-8f5a-35e0-9c7e-98ece0083ed1.json
deleted file mode 100644
index 5dbca45..0000000
--- a/test/data/enm/study-FCSV-7d043672-8f5a-35e0-9c7e-98ece0083ed1.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-7d043672-8f5a-35e0-9c7e-98ece0083ed1",
- "owner": {
- "substance": {
- "uuid": "FCSV-8b5b62c3-7fd2-3bba-b293-b7537e4971b1"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.256,
- "errQualifier": "sd",
- "errorValue": 0.016
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.278,
- "errQualifier": "sd",
- "errorValue": 0.018
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 543.83,
- "errQualifier": "sd",
- "errorValue": 1.39
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7d0bb4dd-ed85-30f6-ba98-1fc013bc6f4a.json b/test/data/enm/study-FCSV-7d0bb4dd-ed85-30f6-ba98-1fc013bc6f4a.json
deleted file mode 100644
index 91ddb65..0000000
--- a/test/data/enm/study-FCSV-7d0bb4dd-ed85-30f6-ba98-1fc013bc6f4a.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-7d0bb4dd-ed85-30f6-ba98-1fc013bc6f4a",
- "owner": {
- "substance": {
- "uuid": "FCSV-d6c56b3e-71a2-330b-92b6-9c90e6046eaa"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.218,
- "errQualifier": "sd",
- "errorValue": 0.011
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.28,
- "errQualifier": "sd",
- "errorValue": 0.025
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 522.6,
- "errQualifier": "sd",
- "errorValue": 0.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7d12f456-ef0b-328f-93ba-f514823d827c.json b/test/data/enm/study-FCSV-7d12f456-ef0b-328f-93ba-f514823d827c.json
deleted file mode 100644
index db94329..0000000
--- a/test/data/enm/study-FCSV-7d12f456-ef0b-328f-93ba-f514823d827c.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-7d12f456-ef0b-328f-93ba-f514823d827c",
- "owner": {
- "substance": {
- "uuid": "FCSV-3b96ad7a-bf2d-360d-881a-26094f498af6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.458,
- "errQualifier": "sd",
- "errorValue": 0.019
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -1.128,
- "errQualifier": "std",
- "errorValue": 0.06
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7d3f2f3d-f9ab-3ded-9548-7a799b765419.json b/test/data/enm/study-FCSV-7d3f2f3d-f9ab-3ded-9548-7a799b765419.json
deleted file mode 100644
index ca1aa28..0000000
--- a/test/data/enm/study-FCSV-7d3f2f3d-f9ab-3ded-9548-7a799b765419.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-7d3f2f3d-f9ab-3ded-9548-7a799b765419",
- "owner": {
- "substance": {
- "uuid": "FCSV-2a853f39-424f-3a63-91f3-1300f85ebe73"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "1-Dodecanethiol"
- }
- },
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "benzyldimethylhexadecylammonium bromide"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7d870472-2fb8-3056-8baa-21454f1b2989.json b/test/data/enm/study-FCSV-7d870472-2fb8-3056-8baa-21454f1b2989.json
deleted file mode 100644
index 504706a..0000000
--- a/test/data/enm/study-FCSV-7d870472-2fb8-3056-8baa-21454f1b2989.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-7d870472-2fb8-3056-8baa-21454f1b2989",
- "owner": {
- "substance": {
- "uuid": "FCSV-c4e9df58-f3fb-34f6-9c56-0626c12fb1b7"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.245,
- "errQualifier": "sd",
- "errorValue": 0.004
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.377,
- "errQualifier": "sd",
- "errorValue": 0.017
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 524.7,
- "errQualifier": "sd",
- "errorValue": 0.26
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7d8e6118-dc58-37d2-b909-14588382b459.json b/test/data/enm/study-FCSV-7d8e6118-dc58-37d2-b909-14588382b459.json
deleted file mode 100644
index d046da1..0000000
--- a/test/data/enm/study-FCSV-7d8e6118-dc58-37d2-b909-14588382b459.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-7d8e6118-dc58-37d2-b909-14588382b459",
- "owner": {
- "substance": {
- "uuid": "FCSV-aab0ef77-8a71-36d7-9185-d2f76b9e3567"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -6.94,
- "errQualifier": "sd",
- "errorValue": 1.33
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -6.06,
- "errQualifier": "sd",
- "errorValue": 1.05
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7dee205a-dbc9-3031-a452-f97c00ec48b0.json b/test/data/enm/study-FCSV-7dee205a-dbc9-3031-a452-f97c00ec48b0.json
deleted file mode 100644
index a6d1622..0000000
--- a/test/data/enm/study-FCSV-7dee205a-dbc9-3031-a452-f97c00ec48b0.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-7dee205a-dbc9-3031-a452-f97c00ec48b0",
- "owner": {
- "substance": {
- "uuid": "FCSV-8e1a76df-a12d-3254-ae6b-28e20153ef59"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.202,
- "errQualifier": "sd",
- "errorValue": 0.029
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.197,
- "errQualifier": "sd",
- "errorValue": 0.017
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7e7896a4-f3a3-3e01-a638-a45227f5dee2.json b/test/data/enm/study-FCSV-7e7896a4-f3a3-3e01-a638-a45227f5dee2.json
deleted file mode 100644
index 43ddb4f..0000000
--- a/test/data/enm/study-FCSV-7e7896a4-f3a3-3e01-a638-a45227f5dee2.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-7e7896a4-f3a3-3e01-a638-a45227f5dee2",
- "owner": {
- "substance": {
- "uuid": "FCSV-8a45dec8-a551-33cc-a7ac-7750d9f30389"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
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- "interpretation": {
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- },
- "effects": [
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- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Thiolated L-serine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7ec8af44-e498-3e12-b3db-d1ada9f39073.json b/test/data/enm/study-FCSV-7ec8af44-e498-3e12-b3db-d1ada9f39073.json
deleted file mode 100644
index dfbb6b2..0000000
--- a/test/data/enm/study-FCSV-7ec8af44-e498-3e12-b3db-d1ada9f39073.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-7ec8af44-e498-3e12-b3db-d1ada9f39073",
- "owner": {
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- "uuid": "FCSV-4c523ea9-f3e8-32f4-9152-f73400aedb67"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 4.358,
- "errQualifier": "sd",
- "errorValue": 1.779
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7f505d2b-2dda-3422-94ba-4e7cd06137a1.json b/test/data/enm/study-FCSV-7f505d2b-2dda-3422-94ba-4e7cd06137a1.json
deleted file mode 100644
index 298700f..0000000
--- a/test/data/enm/study-FCSV-7f505d2b-2dda-3422-94ba-4e7cd06137a1.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-7f505d2b-2dda-3422-94ba-4e7cd06137a1",
- "owner": {
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- "uuid": "FCSV-edc7f198-f391-328e-aa68-7d3f00b62af5"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
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- "effects": [
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- "endpoint": "FUNCTIONAL GROUP",
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
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- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "6-Mercaptohexanoic acid"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7fd74a5d-c0ee-3866-a3d4-53a29580fd83.json b/test/data/enm/study-FCSV-7fd74a5d-c0ee-3866-a3d4-53a29580fd83.json
deleted file mode 100644
index 34f26b2..0000000
--- a/test/data/enm/study-FCSV-7fd74a5d-c0ee-3866-a3d4-53a29580fd83.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-7fd74a5d-c0ee-3866-a3d4-53a29580fd83",
- "owner": {
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- "uuid": "FCSV-0d5c0fc7-de56-3507-b651-1c91bf030465"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "effects": [
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- "conditions": {
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- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.137,
- "errQualifier": "sd",
- "errorValue": 0.028
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.266,
- "errQualifier": "sd",
- "errorValue": 0.002
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-7fde216d-c151-3a75-bb33-698481422e42.json b/test/data/enm/study-FCSV-7fde216d-c151-3a75-bb33-698481422e42.json
deleted file mode 100644
index 4475b58..0000000
--- a/test/data/enm/study-FCSV-7fde216d-c151-3a75-bb33-698481422e42.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-7fde216d-c151-3a75-bb33-698481422e42",
- "owner": {
- "substance": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "interpretation": {
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- "effects": [
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- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 5.331,
- "errQualifier": "sd",
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- }
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diff --git a/test/data/enm/study-FCSV-7fe45a88-683c-3075-ac23-53e3045d5b52.json b/test/data/enm/study-FCSV-7fe45a88-683c-3075-ac23-53e3045d5b52.json
deleted file mode 100644
index e8300c9..0000000
--- a/test/data/enm/study-FCSV-7fe45a88-683c-3075-ac23-53e3045d5b52.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-7fe45a88-683c-3075-ac23-53e3045d5b52",
- "owner": {
- "substance": {
- "uuid": "FCSV-924a51b9-97d3-31fb-b289-52688d9d0d3c"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
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- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.167,
- "errQualifier": "sd",
- "errorValue": 0.031
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.215,
- "errQualifier": "sd",
- "errorValue": 0.033
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-800c9527-74db-3661-86f5-fe2592183750.json b/test/data/enm/study-FCSV-800c9527-74db-3661-86f5-fe2592183750.json
deleted file mode 100644
index 1d93430..0000000
--- a/test/data/enm/study-FCSV-800c9527-74db-3661-86f5-fe2592183750.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-800c9527-74db-3661-86f5-fe2592183750",
- "owner": {
- "substance": {
- "uuid": "FCSV-99734121-3347-3d4e-9bc6-67956450b140"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
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- ]
- },
- "parameters": {
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- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
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- }
- ]
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diff --git a/test/data/enm/study-FCSV-8020833d-f010-399c-b741-a1411384ec41.json b/test/data/enm/study-FCSV-8020833d-f010-399c-b741-a1411384ec41.json
deleted file mode 100644
index 21e8176..0000000
--- a/test/data/enm/study-FCSV-8020833d-f010-399c-b741-a1411384ec41.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-8020833d-f010-399c-b741-a1411384ec41",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
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- },
- "effects": [
- {
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 109.94,
- "errQualifier": "sd",
- "errorValue": 3.54
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 67.66,
- "errQualifier": "sd",
- "errorValue": 9.76
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 366.09,
- "errQualifier": "sd",
- "errorValue": 437.99
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
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- },
- "result": {
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- "loValue": 76.52,
- "errQualifier": "sd",
- "errorValue": 11.56
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 104.45,
- "errQualifier": "sd",
- "errorValue": 6.93
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 76.52,
- "errQualifier": "sd",
- "errorValue": 2.12
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 132.43,
- "errQualifier": "sd",
- "errorValue": 29.09
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8020e09b-4628-335a-885b-bcbb4346020b.json b/test/data/enm/study-FCSV-8020e09b-4628-335a-885b-bcbb4346020b.json
deleted file mode 100644
index 3960f5b..0000000
--- a/test/data/enm/study-FCSV-8020e09b-4628-335a-885b-bcbb4346020b.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-8020e09b-4628-335a-885b-bcbb4346020b",
- "owner": {
- "substance": {
- "uuid": "FCSV-8a45dec8-a551-33cc-a7ac-7750d9f30389"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 76.5,
- "errQualifier": "sd",
- "errorValue": 5.39
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 94.89,
- "errQualifier": "sd",
- "errorValue": 6.41
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 76.66,
- "errQualifier": "sd",
- "errorValue": 7.35
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 82.61,
- "errQualifier": "sd",
- "errorValue": 6.08
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 81.49,
- "errQualifier": "sd",
- "errorValue": 7.29
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 67.98,
- "errQualifier": "sd",
- "errorValue": 10.75
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 81.49,
- "errQualifier": "sd",
- "errorValue": 7.05
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 105.55,
- "errQualifier": "sd",
- "errorValue": 4.88
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-80c711cb-8bec-37ef-afff-f8e199652b52.json b/test/data/enm/study-FCSV-80c711cb-8bec-37ef-afff-f8e199652b52.json
deleted file mode 100644
index db8be88..0000000
--- a/test/data/enm/study-FCSV-80c711cb-8bec-37ef-afff-f8e199652b52.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-80c711cb-8bec-37ef-afff-f8e199652b52",
- "owner": {
- "substance": {
- "uuid": "FCSV-0e958d54-f957-37d2-91d1-ee8d9961548e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 38.4,
- "errQualifier": "sd",
- "errorValue": 2.5
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 10.5
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 108
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-80edb18f-ba3f-3afd-b007-e8c29a8b6605.json b/test/data/enm/study-FCSV-80edb18f-ba3f-3afd-b007-e8c29a8b6605.json
deleted file mode 100644
index d8c3a04..0000000
--- a/test/data/enm/study-FCSV-80edb18f-ba3f-3afd-b007-e8c29a8b6605.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-80edb18f-ba3f-3afd-b007-e8c29a8b6605",
- "owner": {
- "substance": {
- "uuid": "FCSV-ed95bb69-9fa7-3a4a-b4a4-32dd947d4d1a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-810004ff-bc02-35cd-ad07-83ba6c64e1e2.json b/test/data/enm/study-FCSV-810004ff-bc02-35cd-ad07-83ba6c64e1e2.json
deleted file mode 100644
index 1d5b2cb..0000000
--- a/test/data/enm/study-FCSV-810004ff-bc02-35cd-ad07-83ba6c64e1e2.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-810004ff-bc02-35cd-ad07-83ba6c64e1e2",
- "owner": {
- "substance": {
- "uuid": "FCSV-47e98c51-7508-362f-84d3-494bb124b849"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.203,
- "errQualifier": "sd",
- "errorValue": 0.227
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.288,
- "errQualifier": "sd",
- "errorValue": 0.013
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-810a867c-109b-3893-b749-e5c0cae4e2f0.json b/test/data/enm/study-FCSV-810a867c-109b-3893-b749-e5c0cae4e2f0.json
deleted file mode 100644
index d444fa1..0000000
--- a/test/data/enm/study-FCSV-810a867c-109b-3893-b749-e5c0cae4e2f0.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-810a867c-109b-3893-b749-e5c0cae4e2f0",
- "owner": {
- "substance": {
- "uuid": "FCSV-7087aac7-6f1d-320f-bfde-5897fe91af64"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.242,
- "errQualifier": "sd",
- "errorValue": 0.066
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.294,
- "errQualifier": "sd",
- "errorValue": 0.003
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 522.77,
- "errQualifier": "sd",
- "errorValue": 0.21
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-815620f8-294c-346f-88e6-553cd8f81176.json b/test/data/enm/study-FCSV-815620f8-294c-346f-88e6-553cd8f81176.json
deleted file mode 100644
index 0569e82..0000000
--- a/test/data/enm/study-FCSV-815620f8-294c-346f-88e6-553cd8f81176.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-815620f8-294c-346f-88e6-553cd8f81176",
- "owner": {
- "substance": {
- "uuid": "FCSV-ceed5aa6-a62e-3202-9bcf-702a94d34785"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.171,
- "errQualifier": "sd",
- "errorValue": 0.028
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.176,
- "errQualifier": "sd",
- "errorValue": 0.008
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-81afb5dc-8373-396b-b03d-2c588f20ecc3.json b/test/data/enm/study-FCSV-81afb5dc-8373-396b-b03d-2c588f20ecc3.json
deleted file mode 100644
index 671518c..0000000
--- a/test/data/enm/study-FCSV-81afb5dc-8373-396b-b03d-2c588f20ecc3.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-81afb5dc-8373-396b-b03d-2c588f20ecc3",
- "owner": {
- "substance": {
- "uuid": "FCSV-c4fe20ba-de05-36c2-9842-5433ce33bd72"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.244,
- "errQualifier": "sd",
- "errorValue": 0.01
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.276,
- "errQualifier": "sd",
- "errorValue": 0.015
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 521.7,
- "errQualifier": "sd",
- "errorValue": 0.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-82b91c35-0783-3c94-a83a-b30041d0e55d.json b/test/data/enm/study-FCSV-82b91c35-0783-3c94-a83a-b30041d0e55d.json
deleted file mode 100644
index 9e68508..0000000
--- a/test/data/enm/study-FCSV-82b91c35-0783-3c94-a83a-b30041d0e55d.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-82b91c35-0783-3c94-a83a-b30041d0e55d",
- "owner": {
- "substance": {
- "uuid": "FCSV-206b1a13-e02a-38a0-88ec-d5a8bfdabc55"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 230.517,
- "errQualifier": "sd",
- "errorValue": 26.385
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.015
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-832b6979-cc95-3201-9639-b71914942da2.json b/test/data/enm/study-FCSV-832b6979-cc95-3201-9639-b71914942da2.json
deleted file mode 100644
index 12a453a..0000000
--- a/test/data/enm/study-FCSV-832b6979-cc95-3201-9639-b71914942da2.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-832b6979-cc95-3201-9639-b71914942da2",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc2c755f-9eee-30e3-9e98-1fbb2397c980"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 1.91,
- "errQualifier": "sd",
- "errorValue": 0.452
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-835b13cc-d9ad-3643-9d84-792f19fca37b.json b/test/data/enm/study-FCSV-835b13cc-d9ad-3643-9d84-792f19fca37b.json
deleted file mode 100644
index 10ba222..0000000
--- a/test/data/enm/study-FCSV-835b13cc-d9ad-3643-9d84-792f19fca37b.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-835b13cc-d9ad-3643-9d84-792f19fca37b",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 81.94,
- "errQualifier": "sd",
- "errorValue": 7.42
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 84.87,
- "errQualifier": "sd",
- "errorValue": 8.05
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 82.49,
- "errQualifier": "sd",
- "errorValue": 6.66
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 82.2,
- "errQualifier": "sd",
- "errorValue": 9.28
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 87.02,
- "errQualifier": "sd",
- "errorValue": 8.16
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 78.57,
- "errQualifier": "sd",
- "errorValue": 10.9
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 87.02,
- "errQualifier": "sd",
- "errorValue": 4.8
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 87.48,
- "errQualifier": "sd",
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- }
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diff --git a/test/data/enm/study-FCSV-83fb3d23-2e92-3ec5-bee4-31f176722134.json b/test/data/enm/study-FCSV-83fb3d23-2e92-3ec5-bee4-31f176722134.json
deleted file mode 100644
index b4bc32c..0000000
--- a/test/data/enm/study-FCSV-83fb3d23-2e92-3ec5-bee4-31f176722134.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-83fb3d23-2e92-3ec5-bee4-31f176722134",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-84282034-4290-3be7-b443-088e8e334070.json b/test/data/enm/study-FCSV-84282034-4290-3be7-b443-088e8e334070.json
deleted file mode 100644
index 48c6e1b..0000000
--- a/test/data/enm/study-FCSV-84282034-4290-3be7-b443-088e8e334070.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-84282034-4290-3be7-b443-088e8e334070",
- "owner": {
- "substance": {
- "uuid": "FCSV-ffe19c9e-b1a1-3f38-a149-0d587fc5b172"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
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- "endpoint": "Polydispersity index",
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- "errorValue": 0.023
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- {
- "endpoint": "Polydispersity index",
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- "MEDIUM": "Human serum (Sigma #H4522)"
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- "loValue": 0.158,
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diff --git a/test/data/enm/study-FCSV-84452be5-c1f0-35ab-9b51-5142dcfc9442.json b/test/data/enm/study-FCSV-84452be5-c1f0-35ab-9b51-5142dcfc9442.json
deleted file mode 100644
index 47839a1..0000000
--- a/test/data/enm/study-FCSV-84452be5-c1f0-35ab-9b51-5142dcfc9442.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-84452be5-c1f0-35ab-9b51-5142dcfc9442",
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
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- "effects": [
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- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
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- "result": {
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- "loQualifier": "mean",
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- {
- "endpoint": "Log2 transformed",
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diff --git a/test/data/enm/study-FCSV-846bf330-233f-3cfe-a727-340dc9ef25c9.json b/test/data/enm/study-FCSV-846bf330-233f-3cfe-a727-340dc9ef25c9.json
deleted file mode 100644
index 6212bcb..0000000
--- a/test/data/enm/study-FCSV-846bf330-233f-3cfe-a727-340dc9ef25c9.json
+++ /dev/null
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-{
- "uuid": "FCSV-846bf330-233f-3cfe-a727-340dc9ef25c9",
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- }
- },
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- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
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diff --git a/test/data/enm/study-FCSV-8491a4a1-53f3-33c5-8dbc-2a932c364a1e.json b/test/data/enm/study-FCSV-8491a4a1-53f3-33c5-8dbc-2a932c364a1e.json
deleted file mode 100644
index 22a5553..0000000
--- a/test/data/enm/study-FCSV-8491a4a1-53f3-33c5-8dbc-2a932c364a1e.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-8491a4a1-53f3-33c5-8dbc-2a932c364a1e",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- },
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- "title": "4.30 Nanomaterial surface chemistry"
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- "result": {
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- "textValue": "(11-Mercaptoundecyl)-N,N,N-trimethylammonium"
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diff --git a/test/data/enm/study-FCSV-8498956e-ae2f-39d7-80b0-0d96c6e138fd.json b/test/data/enm/study-FCSV-8498956e-ae2f-39d7-80b0-0d96c6e138fd.json
deleted file mode 100644
index 4bf5c66..0000000
--- a/test/data/enm/study-FCSV-8498956e-ae2f-39d7-80b0-0d96c6e138fd.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-8498956e-ae2f-39d7-80b0-0d96c6e138fd",
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- "year": "2014",
- "owner": null
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- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
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- "endpoint": "Intensity Mean Hydrodynamic Diameter",
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- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
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diff --git a/test/data/enm/study-FCSV-84c5d416-3339-381e-af9a-b42200065b53.json b/test/data/enm/study-FCSV-84c5d416-3339-381e-af9a-b42200065b53.json
deleted file mode 100644
index b10579b..0000000
--- a/test/data/enm/study-FCSV-84c5d416-3339-381e-af9a-b42200065b53.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-84c5d416-3339-381e-af9a-b42200065b53",
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- "year": "2014",
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- "protocol": {
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- "category": {
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- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
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- "parameters": {
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diff --git a/test/data/enm/study-FCSV-85459d34-73a1-300b-8288-6bae14d946cb.json b/test/data/enm/study-FCSV-85459d34-73a1-300b-8288-6bae14d946cb.json
deleted file mode 100644
index 550bded..0000000
--- a/test/data/enm/study-FCSV-85459d34-73a1-300b-8288-6bae14d946cb.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-85459d34-73a1-300b-8288-6bae14d946cb",
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- ]
-}
diff --git a/test/data/enm/study-FCSV-8593e832-a6d3-35ee-b387-6501f644e736.json b/test/data/enm/study-FCSV-8593e832-a6d3-35ee-b387-6501f644e736.json
deleted file mode 100644
index 5b0306f..0000000
--- a/test/data/enm/study-FCSV-8593e832-a6d3-35ee-b387-6501f644e736.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-8593e832-a6d3-35ee-b387-6501f644e736",
- "owner": {
- "substance": {
- "uuid": "FCSV-b38f2b71-aa2d-3d72-af88-166a60bedee2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 2.921,
- "errQualifier": "sd",
- "errorValue": 1.048
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-85a50d6e-3f18-3261-99da-ddb636a5ac08.json b/test/data/enm/study-FCSV-85a50d6e-3f18-3261-99da-ddb636a5ac08.json
deleted file mode 100644
index 2fcd974..0000000
--- a/test/data/enm/study-FCSV-85a50d6e-3f18-3261-99da-ddb636a5ac08.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-85a50d6e-3f18-3261-99da-ddb636a5ac08",
- "owner": {
- "substance": {
- "uuid": "FCSV-9c9a7234-a74f-326f-a134-79e004c1f687"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.126,
- "errQualifier": "sd",
- "errorValue": 0.004
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -2.993,
- "errQualifier": "std",
- "errorValue": 0.048
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-85b28cdb-29a2-3303-92ea-672e79965978.json b/test/data/enm/study-FCSV-85b28cdb-29a2-3303-92ea-672e79965978.json
deleted file mode 100644
index e28e37c..0000000
--- a/test/data/enm/study-FCSV-85b28cdb-29a2-3303-92ea-672e79965978.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-85b28cdb-29a2-3303-92ea-672e79965978",
- "owner": {
- "substance": {
- "uuid": "FCSV-2de5071e-596b-3507-84fc-f9ba470cbcbf"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 56.54,
- "errQualifier": "sd",
- "errorValue": 17.47
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 72.3,
- "errQualifier": "sd",
- "errorValue": 1.97
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 38.81,
- "errQualifier": "sd",
- "errorValue": 7.25
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 52.9,
- "errQualifier": "sd",
- "errorValue": 7.28
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 61.14,
- "errQualifier": "sd",
- "errorValue": 6.12
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 46.12,
- "errQualifier": "sd",
- "errorValue": 8.18
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 61.14,
- "errQualifier": "sd",
- "errorValue": 16.87
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 83.14,
- "errQualifier": "sd",
- "errorValue": 7.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-863410cc-3c44-3bac-b70c-d6edce365dad.json b/test/data/enm/study-FCSV-863410cc-3c44-3bac-b70c-d6edce365dad.json
deleted file mode 100644
index ec36112..0000000
--- a/test/data/enm/study-FCSV-863410cc-3c44-3bac-b70c-d6edce365dad.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-863410cc-3c44-3bac-b70c-d6edce365dad",
- "owner": {
- "substance": {
- "uuid": "FCSV-a7dbc5da-6ccd-3df5-b2f1-467f625a08cb"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 38.4,
- "errQualifier": "sd",
- "errorValue": 2.5
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 10.5
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 108
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-863e8abb-da78-36c4-8872-4c336df7eb78.json b/test/data/enm/study-FCSV-863e8abb-da78-36c4-8872-4c336df7eb78.json
deleted file mode 100644
index 31e0e50..0000000
--- a/test/data/enm/study-FCSV-863e8abb-da78-36c4-8872-4c336df7eb78.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-863e8abb-da78-36c4-8872-4c336df7eb78",
- "owner": {
- "substance": {
- "uuid": "FCSV-924a51b9-97d3-31fb-b289-52688d9d0d3c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.216,
- "errQualifier": "sd",
- "errorValue": 0.065
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.282,
- "errQualifier": "sd",
- "errorValue": 0.01
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 518,
- "errQualifier": "sd",
- "errorValue": 0.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-86749e74-7688-34cf-9366-13cd612517c9.json b/test/data/enm/study-FCSV-86749e74-7688-34cf-9366-13cd612517c9.json
deleted file mode 100644
index 3c41637..0000000
--- a/test/data/enm/study-FCSV-86749e74-7688-34cf-9366-13cd612517c9.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-86749e74-7688-34cf-9366-13cd612517c9",
- "owner": {
- "substance": {
- "uuid": "FCSV-63da0f0e-51b8-3c56-b5d3-d4e0e9fb06a6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.005,
- "errQualifier": "sd",
- "errorValue": 0.003
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -7.762,
- "errQualifier": "std",
- "errorValue": 1.021
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8693636f-f6ee-3e38-9ab5-7bbc229c3400.json b/test/data/enm/study-FCSV-8693636f-f6ee-3e38-9ab5-7bbc229c3400.json
deleted file mode 100644
index ecb576c..0000000
--- a/test/data/enm/study-FCSV-8693636f-f6ee-3e38-9ab5-7bbc229c3400.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-8693636f-f6ee-3e38-9ab5-7bbc229c3400",
- "owner": {
- "substance": {
- "uuid": "FCSV-74492618-7ff6-39c9-b396-8d7465109083"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Methoxy-poly(ethylene glycol)-thiol (1kDa)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-86d482b8-31d4-31c8-80ac-27b6f1d39d4c.json b/test/data/enm/study-FCSV-86d482b8-31d4-31c8-80ac-27b6f1d39d4c.json
deleted file mode 100644
index a0078ba..0000000
--- a/test/data/enm/study-FCSV-86d482b8-31d4-31c8-80ac-27b6f1d39d4c.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-86d482b8-31d4-31c8-80ac-27b6f1d39d4c",
- "owner": {
- "substance": {
- "uuid": "FCSV-d6c56b3e-71a2-330b-92b6-9c90e6046eaa"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.019,
- "errQualifier": "sd",
- "errorValue": 0.009
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -5.737,
- "errQualifier": "std",
- "errorValue": 0.659
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-86fa7c5a-cb3f-3171-a641-5690df291a03.json b/test/data/enm/study-FCSV-86fa7c5a-cb3f-3171-a641-5690df291a03.json
deleted file mode 100644
index 74de3b9..0000000
--- a/test/data/enm/study-FCSV-86fa7c5a-cb3f-3171-a641-5690df291a03.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-86fa7c5a-cb3f-3171-a641-5690df291a03",
- "owner": {
- "substance": {
- "uuid": "FCSV-3b96ad7a-bf2d-360d-881a-26094f498af6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-870d6aed-7447-324d-865a-f7b608ce0166.json b/test/data/enm/study-FCSV-870d6aed-7447-324d-865a-f7b608ce0166.json
deleted file mode 100644
index 431dfec..0000000
--- a/test/data/enm/study-FCSV-870d6aed-7447-324d-865a-f7b608ce0166.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-870d6aed-7447-324d-865a-f7b608ce0166",
- "owner": {
- "substance": {
- "uuid": "FCSV-6046fc9f-3c73-3215-97e2-4ddcf85f41da"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.83,
- "errQualifier": "sd",
- "errorValue": 0.09
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-87695bc4-e2bb-38f8-b9f2-a2977673feaa.json b/test/data/enm/study-FCSV-87695bc4-e2bb-38f8-b9f2-a2977673feaa.json
deleted file mode 100644
index fb9c791..0000000
--- a/test/data/enm/study-FCSV-87695bc4-e2bb-38f8-b9f2-a2977673feaa.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-87695bc4-e2bb-38f8-b9f2-a2977673feaa",
- "owner": {
- "substance": {
- "uuid": "FCSV-bfa499a9-7d1a-34da-bccf-4fc30c65f03d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 24.19,
- "errQualifier": "sd",
- "errorValue": 0.78
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 41.88,
- "errQualifier": "sd",
- "errorValue": 0.95
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 22.04,
- "errQualifier": "sd",
- "errorValue": 0.9
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 39.15,
- "errQualifier": "sd",
- "errorValue": 1.27
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 25.94,
- "errQualifier": "sd",
- "errorValue": 2.83
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 35.75,
- "errQualifier": "sd",
- "errorValue": 2.37
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 25.94,
- "errQualifier": "sd",
- "errorValue": 2.04
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 45.8,
- "errQualifier": "sd",
- "errorValue": 2.13
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-87744a9f-8f59-347a-b7cb-7db7dcf4dc56.json b/test/data/enm/study-FCSV-87744a9f-8f59-347a-b7cb-7db7dcf4dc56.json
deleted file mode 100644
index 153ae9c..0000000
--- a/test/data/enm/study-FCSV-87744a9f-8f59-347a-b7cb-7db7dcf4dc56.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-87744a9f-8f59-347a-b7cb-7db7dcf4dc56",
- "owner": {
- "substance": {
- "uuid": "FCSV-43f0ea59-aa2f-31d8-8d87-19c95ec9be18"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 5.06,
- "errQualifier": "sd",
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- }
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- ]
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diff --git a/test/data/enm/study-FCSV-877cf51d-4921-3db3-a7a3-5c172872b61a.json b/test/data/enm/study-FCSV-877cf51d-4921-3db3-a7a3-5c172872b61a.json
deleted file mode 100644
index e8aca74..0000000
--- a/test/data/enm/study-FCSV-877cf51d-4921-3db3-a7a3-5c172872b61a.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-877cf51d-4921-3db3-a7a3-5c172872b61a",
- "owner": {
- "substance": {
- "uuid": "FCSV-cb2f11a0-4af8-318b-8a60-3908f45c2e65"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-878cbd23-fdf1-3942-af3c-57bd886f1553.json b/test/data/enm/study-FCSV-878cbd23-fdf1-3942-af3c-57bd886f1553.json
deleted file mode 100644
index bba6b02..0000000
--- a/test/data/enm/study-FCSV-878cbd23-fdf1-3942-af3c-57bd886f1553.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-878cbd23-fdf1-3942-af3c-57bd886f1553",
- "owner": {
- "substance": {
- "uuid": "FCSV-ae94c9b5-ffeb-3b3b-8464-1dfe3dbde073"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Citrate"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-87bfbff9-cda6-388c-a927-0d1af0d3a6c4.json b/test/data/enm/study-FCSV-87bfbff9-cda6-388c-a927-0d1af0d3a6c4.json
deleted file mode 100644
index 5f4de9b..0000000
--- a/test/data/enm/study-FCSV-87bfbff9-cda6-388c-a927-0d1af0d3a6c4.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-87bfbff9-cda6-388c-a927-0d1af0d3a6c4",
- "owner": {
- "substance": {
- "uuid": "FCSV-aab0ef77-8a71-36d7-9185-d2f76b9e3567"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-87f5d87c-e64e-3e39-ae9f-4b3ff5887dfd.json b/test/data/enm/study-FCSV-87f5d87c-e64e-3e39-ae9f-4b3ff5887dfd.json
deleted file mode 100644
index 39aa1ed..0000000
--- a/test/data/enm/study-FCSV-87f5d87c-e64e-3e39-ae9f-4b3ff5887dfd.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-87f5d87c-e64e-3e39-ae9f-4b3ff5887dfd",
- "owner": {
- "substance": {
- "uuid": "FCSV-6d5b38c4-f57f-31de-b8b4-2719792f82f2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
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- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-88615611-42b9-31c6-adfe-9855235f4bf1.json b/test/data/enm/study-FCSV-88615611-42b9-31c6-adfe-9855235f4bf1.json
deleted file mode 100644
index aac77f8..0000000
--- a/test/data/enm/study-FCSV-88615611-42b9-31c6-adfe-9855235f4bf1.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-88615611-42b9-31c6-adfe-9855235f4bf1",
- "owner": {
- "substance": {
- "uuid": "FCSV-1842b3a2-413c-327c-a07a-9905269bafb5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.1,
- "errQualifier": "sd",
- "errorValue": 0.001
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.096,
- "errQualifier": "sd",
- "errorValue": 0.016
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-88c52ddb-728c-39b7-9937-7f3a308e8e7d.json b/test/data/enm/study-FCSV-88c52ddb-728c-39b7-9937-7f3a308e8e7d.json
deleted file mode 100644
index ce16861..0000000
--- a/test/data/enm/study-FCSV-88c52ddb-728c-39b7-9937-7f3a308e8e7d.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-88c52ddb-728c-39b7-9937-7f3a308e8e7d",
- "owner": {
- "substance": {
- "uuid": "FCSV-3b96ad7a-bf2d-360d-881a-26094f498af6"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 235.484,
- "errQualifier": "sd",
- "errorValue": 1.236
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.01
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-88d6d22b-7048-3573-8d37-7a1f9eea24b7.json b/test/data/enm/study-FCSV-88d6d22b-7048-3573-8d37-7a1f9eea24b7.json
deleted file mode 100644
index 8dfd6b0..0000000
--- a/test/data/enm/study-FCSV-88d6d22b-7048-3573-8d37-7a1f9eea24b7.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-88d6d22b-7048-3573-8d37-7a1f9eea24b7",
- "owner": {
- "substance": {
- "uuid": "FCSV-6aea0743-7abb-3448-85ce-961b67fca97f"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
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- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 774.66,
- "errQualifier": "sd",
- "errorValue": 8.363
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 8,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.036
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-88dd6e3b-8d64-3025-bcc1-fa6e781c05c2.json b/test/data/enm/study-FCSV-88dd6e3b-8d64-3025-bcc1-fa6e781c05c2.json
deleted file mode 100644
index df6ec79..0000000
--- a/test/data/enm/study-FCSV-88dd6e3b-8d64-3025-bcc1-fa6e781c05c2.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-88dd6e3b-8d64-3025-bcc1-fa6e781c05c2",
- "owner": {
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
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- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.022,
- "errQualifier": "sd",
- "errorValue": 0.003
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.028,
- "errQualifier": "sd",
- "errorValue": 0.02
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-88ee43b6-8a97-3b62-a583-6a42876cfe7e.json b/test/data/enm/study-FCSV-88ee43b6-8a97-3b62-a583-6a42876cfe7e.json
deleted file mode 100644
index 1c08f5e..0000000
--- a/test/data/enm/study-FCSV-88ee43b6-8a97-3b62-a583-6a42876cfe7e.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-88ee43b6-8a97-3b62-a583-6a42876cfe7e",
- "owner": {
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "effects": [
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- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.216,
- "errQualifier": "sd",
- "errorValue": 0.027
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.194,
- "errQualifier": "sd",
- "errorValue": 0.015
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-8906c5a5-e98a-3c4b-b5e1-2e034354dd70.json b/test/data/enm/study-FCSV-8906c5a5-e98a-3c4b-b5e1-2e034354dd70.json
deleted file mode 100644
index 22d0916..0000000
--- a/test/data/enm/study-FCSV-8906c5a5-e98a-3c4b-b5e1-2e034354dd70.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-8906c5a5-e98a-3c4b-b5e1-2e034354dd70",
- "owner": {
- "substance": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 1.834,
- "errQualifier": "sd",
- "errorValue": 0.742
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-893b3a4f-3a7a-3ca6-8b98-56eff949dc5a.json b/test/data/enm/study-FCSV-893b3a4f-3a7a-3ca6-8b98-56eff949dc5a.json
deleted file mode 100644
index 1982de2..0000000
--- a/test/data/enm/study-FCSV-893b3a4f-3a7a-3ca6-8b98-56eff949dc5a.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-893b3a4f-3a7a-3ca6-8b98-56eff949dc5a",
- "owner": {
- "substance": {
- "uuid": "FCSV-cd7105f2-f630-360e-b8dc-ff42b18bb421"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "1-Dodecanethiol"
- }
- },
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "stearic acid"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8976c22d-dbe6-378a-bc46-897155990eda.json b/test/data/enm/study-FCSV-8976c22d-dbe6-378a-bc46-897155990eda.json
deleted file mode 100644
index cb7979e..0000000
--- a/test/data/enm/study-FCSV-8976c22d-dbe6-378a-bc46-897155990eda.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-8976c22d-dbe6-378a-bc46-897155990eda",
- "owner": {
- "substance": {
- "uuid": "FCSV-d1731b11-29a7-3b39-bf48-000a31d9c46b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-899abb39-bd01-3ff7-8efe-be10d63b64ac.json b/test/data/enm/study-FCSV-899abb39-bd01-3ff7-8efe-be10d63b64ac.json
deleted file mode 100644
index 065673d..0000000
--- a/test/data/enm/study-FCSV-899abb39-bd01-3ff7-8efe-be10d63b64ac.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-899abb39-bd01-3ff7-8efe-be10d63b64ac",
- "owner": {
- "substance": {
- "uuid": "FCSV-5b29295c-f2ab-3e5a-bb32-37caac38b002"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 23.09,
- "errQualifier": "sd",
- "errorValue": 1.52
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 37.75,
- "errQualifier": "sd",
- "errorValue": 2.3
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 21.22,
- "errQualifier": "sd",
- "errorValue": 0.25
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 74.66,
- "errQualifier": "sd",
- "errorValue": 46.91
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23.04,
- "errQualifier": "sd",
- "errorValue": 0.54
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31.4,
- "errQualifier": "sd",
- "errorValue": 7.28
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23.04,
- "errQualifier": "sd",
- "errorValue": 0.8
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 68.92,
- "errQualifier": "sd",
- "errorValue": 19.49
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-89be2bda-58ee-316e-84c5-c34757aac32b.json b/test/data/enm/study-FCSV-89be2bda-58ee-316e-84c5-c34757aac32b.json
deleted file mode 100644
index 415dd94..0000000
--- a/test/data/enm/study-FCSV-89be2bda-58ee-316e-84c5-c34757aac32b.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-89be2bda-58ee-316e-84c5-c34757aac32b",
- "owner": {
- "substance": {
- "uuid": "FCSV-9a56b1e5-2e22-31c4-b979-e8e9fee728c6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -2.02,
- "errQualifier": "sd",
- "errorValue": 0.38
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -3.89,
- "errQualifier": "sd",
- "errorValue": 2.53
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8a1fade0-eae6-33b0-acd8-e60031a3e03f.json b/test/data/enm/study-FCSV-8a1fade0-eae6-33b0-acd8-e60031a3e03f.json
deleted file mode 100644
index 089b06a..0000000
--- a/test/data/enm/study-FCSV-8a1fade0-eae6-33b0-acd8-e60031a3e03f.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-8a1fade0-eae6-33b0-acd8-e60031a3e03f",
- "owner": {
- "substance": {
- "uuid": "FCSV-bdd4c371-ffec-34f1-ae5b-2c60d243e867"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.28,
- "errQualifier": "sd",
- "errorValue": 0.054
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.307,
- "errQualifier": "sd",
- "errorValue": 0.084
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 544.1,
- "errQualifier": "sd",
- "errorValue": 1.57
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8a5eafaf-d3cd-336e-bbeb-101e6aa4b20f.json b/test/data/enm/study-FCSV-8a5eafaf-d3cd-336e-bbeb-101e6aa4b20f.json
deleted file mode 100644
index 7ab89f7..0000000
--- a/test/data/enm/study-FCSV-8a5eafaf-d3cd-336e-bbeb-101e6aa4b20f.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-8a5eafaf-d3cd-336e-bbeb-101e6aa4b20f",
- "owner": {
- "substance": {
- "uuid": "FCSV-3c5fb4b0-2e4e-3dae-9eb2-1dbfd202cd13"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 7.278,
- "errQualifier": "sd",
- "errorValue": 1.288
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8ac3b0d4-6cd0-3563-9b99-e398a4713062.json b/test/data/enm/study-FCSV-8ac3b0d4-6cd0-3563-9b99-e398a4713062.json
deleted file mode 100644
index 744af8c..0000000
--- a/test/data/enm/study-FCSV-8ac3b0d4-6cd0-3563-9b99-e398a4713062.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-8ac3b0d4-6cd0-3563-9b99-e398a4713062",
- "owner": {
- "substance": {
- "uuid": "FCSV-b228fc7b-c407-368a-bc1c-359c7375bb9b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8afdac83-1c56-3861-ab6d-59983f8e1737.json b/test/data/enm/study-FCSV-8afdac83-1c56-3861-ab6d-59983f8e1737.json
deleted file mode 100644
index d93d75c..0000000
--- a/test/data/enm/study-FCSV-8afdac83-1c56-3861-ab6d-59983f8e1737.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-8afdac83-1c56-3861-ab6d-59983f8e1737",
- "owner": {
- "substance": {
- "uuid": "FCSV-9a56b1e5-2e22-31c4-b979-e8e9fee728c6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.272,
- "errQualifier": "sd",
- "errorValue": 0.342
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8b9a51b3-0a4e-3d9e-9266-9353658d84d4.json b/test/data/enm/study-FCSV-8b9a51b3-0a4e-3d9e-9266-9353658d84d4.json
deleted file mode 100644
index 9f38b7b..0000000
--- a/test/data/enm/study-FCSV-8b9a51b3-0a4e-3d9e-9266-9353658d84d4.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-8b9a51b3-0a4e-3d9e-9266-9353658d84d4",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f5cd32a-3350-300b-91d0-87000ee5d7ee"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8c26b01f-3d41-30b6-9055-7efaa29e495a.json b/test/data/enm/study-FCSV-8c26b01f-3d41-30b6-9055-7efaa29e495a.json
deleted file mode 100644
index bdb7756..0000000
--- a/test/data/enm/study-FCSV-8c26b01f-3d41-30b6-9055-7efaa29e495a.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-8c26b01f-3d41-30b6-9055-7efaa29e495a",
- "owner": {
- "substance": {
- "uuid": "FCSV-c4fe20ba-de05-36c2-9842-5433ce33bd72"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8c5bcdfe-39f9-38da-ad75-5adba4db4aa3.json b/test/data/enm/study-FCSV-8c5bcdfe-39f9-38da-ad75-5adba4db4aa3.json
deleted file mode 100644
index 6538f5b..0000000
--- a/test/data/enm/study-FCSV-8c5bcdfe-39f9-38da-ad75-5adba4db4aa3.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-8c5bcdfe-39f9-38da-ad75-5adba4db4aa3",
- "owner": {
- "substance": {
- "uuid": "FCSV-ef28f16c-6ab1-3d8b-b971-37c08688701f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.371,
- "errQualifier": "sd",
- "errorValue": 0.064
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.439,
- "errQualifier": "sd",
- "errorValue": 0.056
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8c89f8b9-a382-37ae-a218-a40715465ac6.json b/test/data/enm/study-FCSV-8c89f8b9-a382-37ae-a218-a40715465ac6.json
deleted file mode 100644
index 0836eea..0000000
--- a/test/data/enm/study-FCSV-8c89f8b9-a382-37ae-a218-a40715465ac6.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-8c89f8b9-a382-37ae-a218-a40715465ac6",
- "owner": {
- "substance": {
- "uuid": "FCSV-6d5b38c4-f57f-31de-b8b4-2719792f82f2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 4.008,
- "errQualifier": "sd",
- "errorValue": 1.048
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8cd113a0-46d5-300b-a410-2042a1431fae.json b/test/data/enm/study-FCSV-8cd113a0-46d5-300b-a410-2042a1431fae.json
deleted file mode 100644
index 0cbdfb7..0000000
--- a/test/data/enm/study-FCSV-8cd113a0-46d5-300b-a410-2042a1431fae.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-8cd113a0-46d5-300b-a410-2042a1431fae",
- "owner": {
- "substance": {
- "uuid": "FCSV-9043e884-a5ba-3fa6-a103-dee0c7b1b3dd"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
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- "errQualifier": "sd",
- "errorValue": 0.032
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- },
- {
- "endpoint": "Log2 transformed",
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- "Cell": "A549"
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- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -3.954,
- "errQualifier": "std",
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diff --git a/test/data/enm/study-FCSV-8cfa97c2-a145-3115-8591-322a57cbc66a.json b/test/data/enm/study-FCSV-8cfa97c2-a145-3115-8591-322a57cbc66a.json
deleted file mode 100644
index de1b661..0000000
--- a/test/data/enm/study-FCSV-8cfa97c2-a145-3115-8591-322a57cbc66a.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-8cfa97c2-a145-3115-8591-322a57cbc66a",
- "owner": {
- "substance": {
- "uuid": "FCSV-7c42c2b4-dcbe-39a4-ae4e-0f0c41a7a5a5"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
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- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
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- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
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- },
- "reliability": {
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- "effects": [
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- "endpoint": "Core size",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
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- },
- {
- "endpoint": "Density",
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
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- {
- "endpoint": "MW",
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- "Remark": null,
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- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
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- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
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diff --git a/test/data/enm/study-FCSV-8d4344b6-664c-3036-a1b6-e5fbe17f4c0b.json b/test/data/enm/study-FCSV-8d4344b6-664c-3036-a1b6-e5fbe17f4c0b.json
deleted file mode 100644
index eb97677..0000000
--- a/test/data/enm/study-FCSV-8d4344b6-664c-3036-a1b6-e5fbe17f4c0b.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-8d4344b6-664c-3036-a1b6-e5fbe17f4c0b",
- "owner": {
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- "citation": {
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- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
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- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
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- "reliability": {
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- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
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- "effects": [
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- "endpoint": "Spectral counts",
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- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8d6b1b26-3768-318a-b393-90f1c4d078c0.json b/test/data/enm/study-FCSV-8d6b1b26-3768-318a-b393-90f1c4d078c0.json
deleted file mode 100644
index 57a2edd..0000000
--- a/test/data/enm/study-FCSV-8d6b1b26-3768-318a-b393-90f1c4d078c0.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-8d6b1b26-3768-318a-b393-90f1c4d078c0",
- "owner": {
- "substance": {
- "uuid": "FCSV-cb2f11a0-4af8-318b-8a60-3908f45c2e65"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.025,
- "errQualifier": "sd",
- "errorValue": 0.003
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
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- "errQualifier": "std",
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- }
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diff --git a/test/data/enm/study-FCSV-8d9180d5-c858-324d-9a8b-ef0c317a8796.json b/test/data/enm/study-FCSV-8d9180d5-c858-324d-9a8b-ef0c317a8796.json
deleted file mode 100644
index de8f128..0000000
--- a/test/data/enm/study-FCSV-8d9180d5-c858-324d-9a8b-ef0c317a8796.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-8d9180d5-c858-324d-9a8b-ef0c317a8796",
- "owner": {
- "substance": {
- "uuid": "FCSV-3adf8c83-83b1-3ffa-8868-b8527d83923b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8da82514-9d1c-36ea-aece-2317a1382bf5.json b/test/data/enm/study-FCSV-8da82514-9d1c-36ea-aece-2317a1382bf5.json
deleted file mode 100644
index 59e1ada..0000000
--- a/test/data/enm/study-FCSV-8da82514-9d1c-36ea-aece-2317a1382bf5.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-8da82514-9d1c-36ea-aece-2317a1382bf5",
- "owner": {
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
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- "effects": [
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- "endpoint": "FUNCTIONAL GROUP",
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- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
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- },
- "result": {
- "unit": null,
- "textValue": "1-Dodecanethiol"
- }
- },
- {
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- "TYPE": {
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- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "hexadecyltrimethylammonium bromide"
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diff --git a/test/data/enm/study-FCSV-8db48b46-4bfa-3b94-8d7d-3d03ef4f89a2.json b/test/data/enm/study-FCSV-8db48b46-4bfa-3b94-8d7d-3d03ef4f89a2.json
deleted file mode 100644
index 237502c..0000000
--- a/test/data/enm/study-FCSV-8db48b46-4bfa-3b94-8d7d-3d03ef4f89a2.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-8db48b46-4bfa-3b94-8d7d-3d03ef4f89a2",
- "owner": {
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- "uuid": "FCSV-9cc7dd73-d27f-35a0-a3f1-81a18429b76a"
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- "company": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
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- "effects": [
- {
- "endpoint": "Spectral counts",
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8dc1341b-fc11-38d1-8c3e-1443f333d06f.json b/test/data/enm/study-FCSV-8dc1341b-fc11-38d1-8c3e-1443f333d06f.json
deleted file mode 100644
index a066c84..0000000
--- a/test/data/enm/study-FCSV-8dc1341b-fc11-38d1-8c3e-1443f333d06f.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-8dc1341b-fc11-38d1-8c3e-1443f333d06f",
- "owner": {
- "substance": {
- "uuid": "FCSV-98074b22-064e-3cd7-a732-f5fa3005fa73"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8df90dbe-eb93-3d89-bc5b-ef8acf283bf4.json b/test/data/enm/study-FCSV-8df90dbe-eb93-3d89-bc5b-ef8acf283bf4.json
deleted file mode 100644
index 61eb5a1..0000000
--- a/test/data/enm/study-FCSV-8df90dbe-eb93-3d89-bc5b-ef8acf283bf4.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-8df90dbe-eb93-3d89-bc5b-ef8acf283bf4",
- "owner": {
- "substance": {
- "uuid": "FCSV-bdd4c371-ffec-34f1-ae5b-2c60d243e867"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.135,
- "errQualifier": "sd",
- "errorValue": 0.06
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.078,
- "errQualifier": "sd",
- "errorValue": 0.019
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8e24b31d-ebbf-399a-ba3b-836d1c719260.json b/test/data/enm/study-FCSV-8e24b31d-ebbf-399a-ba3b-836d1c719260.json
deleted file mode 100644
index 7d1fdf0..0000000
--- a/test/data/enm/study-FCSV-8e24b31d-ebbf-399a-ba3b-836d1c719260.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-8e24b31d-ebbf-399a-ba3b-836d1c719260",
- "owner": {
- "substance": {
- "uuid": "FCSV-62d68a47-f27e-3d76-a7cf-5cacae221ec7"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8e85f9ea-756f-3bc6-afe0-ecb1aff2d056.json b/test/data/enm/study-FCSV-8e85f9ea-756f-3bc6-afe0-ecb1aff2d056.json
deleted file mode 100644
index f81a7b7..0000000
--- a/test/data/enm/study-FCSV-8e85f9ea-756f-3bc6-afe0-ecb1aff2d056.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-8e85f9ea-756f-3bc6-afe0-ecb1aff2d056",
- "owner": {
- "substance": {
- "uuid": "FCSV-9a56b1e5-2e22-31c4-b979-e8e9fee728c6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8ea30a7c-6284-3602-a682-83fe0374deea.json b/test/data/enm/study-FCSV-8ea30a7c-6284-3602-a682-83fe0374deea.json
deleted file mode 100644
index 1eab38f..0000000
--- a/test/data/enm/study-FCSV-8ea30a7c-6284-3602-a682-83fe0374deea.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-8ea30a7c-6284-3602-a682-83fe0374deea",
- "owner": {
- "substance": {
- "uuid": "FCSV-0588dd9b-6227-307f-9e6a-6b07d4717e8c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8ee6302a-79f0-319a-bbef-e5fb86fc2d5d.json b/test/data/enm/study-FCSV-8ee6302a-79f0-319a-bbef-e5fb86fc2d5d.json
deleted file mode 100644
index 8146cf6..0000000
--- a/test/data/enm/study-FCSV-8ee6302a-79f0-319a-bbef-e5fb86fc2d5d.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-8ee6302a-79f0-319a-bbef-e5fb86fc2d5d",
- "owner": {
- "substance": {
- "uuid": "FCSV-ff7e8515-cfad-3d76-a918-d6eeab10a91d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8fcd233b-1cd8-3920-b51c-aa54581d3515.json b/test/data/enm/study-FCSV-8fcd233b-1cd8-3920-b51c-aa54581d3515.json
deleted file mode 100644
index 645a3ba..0000000
--- a/test/data/enm/study-FCSV-8fcd233b-1cd8-3920-b51c-aa54581d3515.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-8fcd233b-1cd8-3920-b51c-aa54581d3515",
- "owner": {
- "substance": {
- "uuid": "FCSV-ef28f16c-6ab1-3d8b-b971-37c08688701f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.352,
- "errQualifier": "sd",
- "errorValue": 0.055
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.348,
- "errQualifier": "sd",
- "errorValue": 0.008
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 526.13,
- "errQualifier": "sd",
- "errorValue": 2.02
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-8fe99120-9f7d-31ef-8410-84ee7c9e4350.json b/test/data/enm/study-FCSV-8fe99120-9f7d-31ef-8410-84ee7c9e4350.json
deleted file mode 100644
index f9cc833..0000000
--- a/test/data/enm/study-FCSV-8fe99120-9f7d-31ef-8410-84ee7c9e4350.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-8fe99120-9f7d-31ef-8410-84ee7c9e4350",
- "owner": {
- "substance": {
- "uuid": "FCSV-06c1d24b-426b-39ec-8047-700808302325"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 31.6,
- "errQualifier": "sd",
- "errorValue": 3.8
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9016a1bc-28d2-3146-9d07-eb4eb0f33fcd.json b/test/data/enm/study-FCSV-9016a1bc-28d2-3146-9d07-eb4eb0f33fcd.json
deleted file mode 100644
index c90488d..0000000
--- a/test/data/enm/study-FCSV-9016a1bc-28d2-3146-9d07-eb4eb0f33fcd.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-9016a1bc-28d2-3146-9d07-eb4eb0f33fcd",
- "owner": {
- "substance": {
- "uuid": "FCSV-93c29ebf-e80e-354c-893f-923385c72858"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "2-Mercaptoethanesulfonate"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-902cb4a8-0cdf-35fd-9d6b-2aa7e4542619.json b/test/data/enm/study-FCSV-902cb4a8-0cdf-35fd-9d6b-2aa7e4542619.json
deleted file mode 100644
index f075388..0000000
--- a/test/data/enm/study-FCSV-902cb4a8-0cdf-35fd-9d6b-2aa7e4542619.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-902cb4a8-0cdf-35fd-9d6b-2aa7e4542619",
- "owner": {
- "substance": {
- "uuid": "FCSV-4683cde2-ec2e-3a2e-974a-3ba15cd79d05"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9040ccc7-24a1-3ae4-a191-8fc9e4bf0ca4.json b/test/data/enm/study-FCSV-9040ccc7-24a1-3ae4-a191-8fc9e4bf0ca4.json
deleted file mode 100644
index 41e6e08..0000000
--- a/test/data/enm/study-FCSV-9040ccc7-24a1-3ae4-a191-8fc9e4bf0ca4.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-9040ccc7-24a1-3ae4-a191-8fc9e4bf0ca4",
- "owner": {
- "substance": {
- "uuid": "FCSV-bfa499a9-7d1a-34da-bccf-4fc30c65f03d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.303,
- "errQualifier": "sd",
- "errorValue": 0.008
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.316,
- "errQualifier": "sd",
- "errorValue": 0.004
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 527.13,
- "errQualifier": "sd",
- "errorValue": 0.55
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-904adcf1-d74f-391e-beac-572065358853.json b/test/data/enm/study-FCSV-904adcf1-d74f-391e-beac-572065358853.json
deleted file mode 100644
index b196fd1..0000000
--- a/test/data/enm/study-FCSV-904adcf1-d74f-391e-beac-572065358853.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-904adcf1-d74f-391e-beac-572065358853",
- "owner": {
- "substance": {
- "uuid": "FCSV-9e599ca9-9a8f-3094-a97b-3fb35b08a82a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 4.12,
- "errQualifier": "sd",
- "errorValue": 0.42
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-90b560f1-57f9-33d1-9b47-336da2e32382.json b/test/data/enm/study-FCSV-90b560f1-57f9-33d1-9b47-336da2e32382.json
deleted file mode 100644
index c4c69f6..0000000
--- a/test/data/enm/study-FCSV-90b560f1-57f9-33d1-9b47-336da2e32382.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-90b560f1-57f9-33d1-9b47-336da2e32382",
- "owner": {
- "substance": {
- "uuid": "FCSV-a4df7f03-50e1-387c-b0b7-2ce62ed03a8c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-912557fc-cf41-3f03-8e23-c0fc93bc28bc.json b/test/data/enm/study-FCSV-912557fc-cf41-3f03-8e23-c0fc93bc28bc.json
deleted file mode 100644
index f4840a6..0000000
--- a/test/data/enm/study-FCSV-912557fc-cf41-3f03-8e23-c0fc93bc28bc.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-912557fc-cf41-3f03-8e23-c0fc93bc28bc",
- "owner": {
- "substance": {
- "uuid": "FCSV-5b29295c-f2ab-3e5a-bb32-37caac38b002"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.274,
- "errQualifier": "sd",
- "errorValue": 0.006
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.327,
- "errQualifier": "sd",
- "errorValue": 0.043
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 518.57,
- "errQualifier": "sd",
- "errorValue": 0.06
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-91279481-6eeb-346b-949a-65853738b445.json b/test/data/enm/study-FCSV-91279481-6eeb-346b-949a-65853738b445.json
deleted file mode 100644
index 4aeb1f2..0000000
--- a/test/data/enm/study-FCSV-91279481-6eeb-346b-949a-65853738b445.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-91279481-6eeb-346b-949a-65853738b445",
- "owner": {
- "substance": {
- "uuid": "FCSV-9043e884-a5ba-3fa6-a103-dee0c7b1b3dd"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 76.53,
- "errQualifier": "sd",
- "errorValue": 4.06
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 100.73,
- "errQualifier": "sd",
- "errorValue": 3.31
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 69.74,
- "errQualifier": "sd",
- "errorValue": 5.78
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 87.48,
- "errQualifier": "sd",
- "errorValue": 11.4
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 82.81,
- "errQualifier": "sd",
- "errorValue": 5.8
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 68.98,
- "errQualifier": "sd",
- "errorValue": 9.04
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 82.81,
- "errQualifier": "sd",
- "errorValue": 4.72
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 110.74,
- "errQualifier": "sd",
- "errorValue": 3.65
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-91293291-0e43-34e6-b34f-d6deb55ce8d3.json b/test/data/enm/study-FCSV-91293291-0e43-34e6-b34f-d6deb55ce8d3.json
deleted file mode 100644
index db7adf8..0000000
--- a/test/data/enm/study-FCSV-91293291-0e43-34e6-b34f-d6deb55ce8d3.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-91293291-0e43-34e6-b34f-d6deb55ce8d3",
- "owner": {
- "substance": {
- "uuid": "FCSV-cf1d4fd3-f16b-3680-96fa-0f5e4b9dd485"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 183.16,
- "errQualifier": "sd",
- "errorValue": 265.6
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 43.77,
- "errQualifier": "sd",
- "errorValue": 2
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 299.33,
- "errQualifier": "sd",
- "errorValue": 458.46
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31.39,
- "errQualifier": "sd",
- "errorValue": 2.42
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 281.85,
- "errQualifier": "sd",
- "errorValue": 104.06
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 27.01,
- "errQualifier": "sd",
- "errorValue": 3.05
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 281.85,
- "errQualifier": "sd",
- "errorValue": 387.14
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 74.93,
- "errQualifier": "sd",
- "errorValue": 0.43
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-912dda58-f26b-3273-afa9-8230e0143479.json b/test/data/enm/study-FCSV-912dda58-f26b-3273-afa9-8230e0143479.json
deleted file mode 100644
index 32402c7..0000000
--- a/test/data/enm/study-FCSV-912dda58-f26b-3273-afa9-8230e0143479.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-912dda58-f26b-3273-afa9-8230e0143479",
- "owner": {
- "substance": {
- "uuid": "FCSV-9b1b9ad6-e41d-3ddd-8bea-561af1fc27aa"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 2.602,
- "errQualifier": "sd",
- "errorValue": 0.963
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9191cdb1-a0e0-308e-80f2-ce6aee57d22d.json b/test/data/enm/study-FCSV-9191cdb1-a0e0-308e-80f2-ce6aee57d22d.json
deleted file mode 100644
index f41bec8..0000000
--- a/test/data/enm/study-FCSV-9191cdb1-a0e0-308e-80f2-ce6aee57d22d.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-9191cdb1-a0e0-308e-80f2-ce6aee57d22d",
- "owner": {
- "substance": {
- "uuid": "FCSV-7087aac7-6f1d-320f-bfde-5897fe91af64"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-91968a66-9099-39a4-b30a-74dd06edf757.json b/test/data/enm/study-FCSV-91968a66-9099-39a4-b30a-74dd06edf757.json
deleted file mode 100644
index 97b5ec2..0000000
--- a/test/data/enm/study-FCSV-91968a66-9099-39a4-b30a-74dd06edf757.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-91968a66-9099-39a4-b30a-74dd06edf757",
- "owner": {
- "substance": {
- "uuid": "FCSV-7ad8c003-d0ee-3ea6-9374-b6e4d2f33401"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Octadecylamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-91de3ce1-b571-3713-8403-5fa8e9a37111.json b/test/data/enm/study-FCSV-91de3ce1-b571-3713-8403-5fa8e9a37111.json
deleted file mode 100644
index 10b4d3d..0000000
--- a/test/data/enm/study-FCSV-91de3ce1-b571-3713-8403-5fa8e9a37111.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-91de3ce1-b571-3713-8403-5fa8e9a37111",
- "owner": {
- "substance": {
- "uuid": "FCSV-fb5e6048-8ee1-351d-915b-d1669681357e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 33.6,
- "errQualifier": "sd",
- "errorValue": 12.04
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 58.95,
- "errQualifier": "sd",
- "errorValue": 0.08
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 16.66,
- "errQualifier": "sd",
- "errorValue": 13.27
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 33.85,
- "errQualifier": "sd",
- "errorValue": 8.97
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 28.99,
- "errQualifier": "sd",
- "errorValue": 12.67
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 26.12,
- "errQualifier": "sd",
- "errorValue": 3.72
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 28.99,
- "errQualifier": "sd",
- "errorValue": 2.76
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 87.33,
- "errQualifier": "sd",
- "errorValue": 12.34
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-920b32ec-b7d5-3208-a4c3-236f82fa392a.json b/test/data/enm/study-FCSV-920b32ec-b7d5-3208-a4c3-236f82fa392a.json
deleted file mode 100644
index 7814f52..0000000
--- a/test/data/enm/study-FCSV-920b32ec-b7d5-3208-a4c3-236f82fa392a.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-920b32ec-b7d5-3208-a4c3-236f82fa392a",
- "owner": {
- "substance": {
- "uuid": "FCSV-7c56798c-f7cd-37d3-8a67-ead57f36db31"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.014,
- "errQualifier": "sd",
- "errorValue": 0.014
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -6.142,
- "errQualifier": "std",
- "errorValue": 1.406
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-921b64d2-8271-3bb5-80a4-49b48d0597b1.json b/test/data/enm/study-FCSV-921b64d2-8271-3bb5-80a4-49b48d0597b1.json
deleted file mode 100644
index 4e33028..0000000
--- a/test/data/enm/study-FCSV-921b64d2-8271-3bb5-80a4-49b48d0597b1.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-921b64d2-8271-3bb5-80a4-49b48d0597b1",
- "owner": {
- "substance": {
- "uuid": "FCSV-62d68a47-f27e-3d76-a7cf-5cacae221ec7"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 689.286,
- "errQualifier": "sd",
- "errorValue": 60.729
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.008
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9249eeb8-97be-3f97-9569-b70e5fa13698.json b/test/data/enm/study-FCSV-9249eeb8-97be-3f97-9569-b70e5fa13698.json
deleted file mode 100644
index 5d7b36e..0000000
--- a/test/data/enm/study-FCSV-9249eeb8-97be-3f97-9569-b70e5fa13698.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-9249eeb8-97be-3f97-9569-b70e5fa13698",
- "owner": {
- "substance": {
- "uuid": "FCSV-1a71d2b3-8121-3790-a66b-774b12829bb3"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.241,
- "errQualifier": "sd",
- "errorValue": 0.06
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.414,
- "errQualifier": "sd",
- "errorValue": 0.018
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 522.73,
- "errQualifier": "sd",
- "errorValue": 0.21
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-934993ac-cac7-3f4e-bf09-d897307af6e2.json b/test/data/enm/study-FCSV-934993ac-cac7-3f4e-bf09-d897307af6e2.json
deleted file mode 100644
index 5c1973a..0000000
--- a/test/data/enm/study-FCSV-934993ac-cac7-3f4e-bf09-d897307af6e2.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-934993ac-cac7-3f4e-bf09-d897307af6e2",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f0e4035-24d4-3a81-b20b-bd156f210616"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 1.808,
- "errQualifier": "sd",
- "errorValue": 0.46
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-935509eb-930a-3b78-819f-ddfada80fb16.json b/test/data/enm/study-FCSV-935509eb-930a-3b78-819f-ddfada80fb16.json
deleted file mode 100644
index d281b12..0000000
--- a/test/data/enm/study-FCSV-935509eb-930a-3b78-819f-ddfada80fb16.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-935509eb-930a-3b78-819f-ddfada80fb16",
- "owner": {
- "substance": {
- "uuid": "FCSV-07629748-9b8e-381b-a4e6-79b495404e02"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Citrate"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-937fa256-97c9-3e65-a573-a59213ac1593.json b/test/data/enm/study-FCSV-937fa256-97c9-3e65-a573-a59213ac1593.json
deleted file mode 100644
index 8ae218c..0000000
--- a/test/data/enm/study-FCSV-937fa256-97c9-3e65-a573-a59213ac1593.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-937fa256-97c9-3e65-a573-a59213ac1593",
- "owner": {
- "substance": {
- "uuid": "FCSV-3adf8c83-83b1-3ffa-8868-b8527d83923b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "(11-Mercaptoundecyl)-N,N,N-trimethylammonium"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-94001a46-eb63-365f-84d9-8a57011d8956.json b/test/data/enm/study-FCSV-94001a46-eb63-365f-84d9-8a57011d8956.json
deleted file mode 100644
index 59c8178..0000000
--- a/test/data/enm/study-FCSV-94001a46-eb63-365f-84d9-8a57011d8956.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-94001a46-eb63-365f-84d9-8a57011d8956",
- "owner": {
- "substance": {
- "uuid": "FCSV-c4e9df58-f3fb-34f6-9c56-0626c12fb1b7"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9418cd42-5fcd-37b7-93c7-31a57bb14e3e.json b/test/data/enm/study-FCSV-9418cd42-5fcd-37b7-93c7-31a57bb14e3e.json
deleted file mode 100644
index adec2ee..0000000
--- a/test/data/enm/study-FCSV-9418cd42-5fcd-37b7-93c7-31a57bb14e3e.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-9418cd42-5fcd-37b7-93c7-31a57bb14e3e",
- "owner": {
- "substance": {
- "uuid": "FCSV-07ecc16e-528e-3904-bb96-0812dff8ea65"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "1-Dodecanethiol"
- }
- },
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "1,2-dioleoyl-3-trimethylammonium-propane"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-942e0772-3012-3107-a09e-02b287fc96d3.json b/test/data/enm/study-FCSV-942e0772-3012-3107-a09e-02b287fc96d3.json
deleted file mode 100644
index 73edbb9..0000000
--- a/test/data/enm/study-FCSV-942e0772-3012-3107-a09e-02b287fc96d3.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-942e0772-3012-3107-a09e-02b287fc96d3",
- "owner": {
- "substance": {
- "uuid": "FCSV-a153cba3-a82d-3e3c-bcbd-335cc5155f44"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9476f9db-39df-3d43-9781-d7c788763c6e.json b/test/data/enm/study-FCSV-9476f9db-39df-3d43-9781-d7c788763c6e.json
deleted file mode 100644
index 3fb247f..0000000
--- a/test/data/enm/study-FCSV-9476f9db-39df-3d43-9781-d7c788763c6e.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-9476f9db-39df-3d43-9781-d7c788763c6e",
- "owner": {
- "substance": {
- "uuid": "FCSV-3adf8c83-83b1-3ffa-8868-b8527d83923b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 31.6,
- "errQualifier": "sd",
- "errorValue": 3.8
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-948aef9b-4a51-3580-a6c2-f278ae66ba47.json b/test/data/enm/study-FCSV-948aef9b-4a51-3580-a6c2-f278ae66ba47.json
deleted file mode 100644
index 6a09ba0..0000000
--- a/test/data/enm/study-FCSV-948aef9b-4a51-3580-a6c2-f278ae66ba47.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-948aef9b-4a51-3580-a6c2-f278ae66ba47",
- "owner": {
- "substance": {
- "uuid": "FCSV-6aea0743-7abb-3448-85ce-961b67fca97f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 81.01,
- "errQualifier": "sd",
- "errorValue": 2.09
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 108.27,
- "errQualifier": "sd",
- "errorValue": 2.16
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 68.59,
- "errQualifier": "sd",
- "errorValue": 16.54
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 244.57,
- "errQualifier": "sd",
- "errorValue": 239.33
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 87.28,
- "errQualifier": "sd",
- "errorValue": 20.37
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 88.72,
- "errQualifier": "sd",
- "errorValue": 7.88
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 87.28,
- "errQualifier": "sd",
- "errorValue": 1.91
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 121.04,
- "errQualifier": "sd",
- "errorValue": 13.6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9490351e-af3e-3e4a-81f9-bca1f3a537e6.json b/test/data/enm/study-FCSV-9490351e-af3e-3e4a-81f9-bca1f3a537e6.json
deleted file mode 100644
index 6f6c18f..0000000
--- a/test/data/enm/study-FCSV-9490351e-af3e-3e4a-81f9-bca1f3a537e6.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-9490351e-af3e-3e4a-81f9-bca1f3a537e6",
- "owner": {
- "substance": {
- "uuid": "FCSV-6405ef25-683e-3763-a4e3-f56eb93174e4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-94aab4c9-2ae4-3d23-96d8-df3cadfe37f2.json b/test/data/enm/study-FCSV-94aab4c9-2ae4-3d23-96d8-df3cadfe37f2.json
deleted file mode 100644
index 971b15a..0000000
--- a/test/data/enm/study-FCSV-94aab4c9-2ae4-3d23-96d8-df3cadfe37f2.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-94aab4c9-2ae4-3d23-96d8-df3cadfe37f2",
- "owner": {
- "substance": {
- "uuid": "FCSV-ee07f574-0b80-31db-b1f2-535f6d6626b0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
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- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Poly(vinyl alcohol)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-94b5f31e-61a7-3f1b-b89f-24d4310fe924.json b/test/data/enm/study-FCSV-94b5f31e-61a7-3f1b-b89f-24d4310fe924.json
deleted file mode 100644
index 45e8869..0000000
--- a/test/data/enm/study-FCSV-94b5f31e-61a7-3f1b-b89f-24d4310fe924.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-94b5f31e-61a7-3f1b-b89f-24d4310fe924",
- "owner": {
- "substance": {
- "uuid": "FCSV-47e98c51-7508-362f-84d3-494bb124b849"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 34.33,
- "errQualifier": "sd",
- "errorValue": 21.22
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 52,
- "errQualifier": "sd",
- "errorValue": 5.26
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 19.29,
- "errQualifier": "sd",
- "errorValue": 3.7
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 22.58,
- "errQualifier": "sd",
- "errorValue": 10.91
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 49.98,
- "errQualifier": "sd",
- "errorValue": 4.8
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 19.23,
- "errQualifier": "sd",
- "errorValue": 9.24
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loValue": 49.98,
- "errQualifier": "sd",
- "errorValue": 46.28
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 67.07,
- "errQualifier": "sd",
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- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-94d66c14-a96c-301c-a611-b4f1c33cf3a8.json b/test/data/enm/study-FCSV-94d66c14-a96c-301c-a611-b4f1c33cf3a8.json
deleted file mode 100644
index edfc1fb..0000000
--- a/test/data/enm/study-FCSV-94d66c14-a96c-301c-a611-b4f1c33cf3a8.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-94d66c14-a96c-301c-a611-b4f1c33cf3a8",
- "owner": {
- "substance": {
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- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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diff --git a/test/data/enm/study-FCSV-94fdd043-a71c-3db4-9e90-938ef777a411.json b/test/data/enm/study-FCSV-94fdd043-a71c-3db4-9e90-938ef777a411.json
deleted file mode 100644
index 2372737..0000000
--- a/test/data/enm/study-FCSV-94fdd043-a71c-3db4-9e90-938ef777a411.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-94fdd043-a71c-3db4-9e90-938ef777a411",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
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- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
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diff --git a/test/data/enm/study-FCSV-951a4235-fe0f-30d4-8701-5fd126717490.json b/test/data/enm/study-FCSV-951a4235-fe0f-30d4-8701-5fd126717490.json
deleted file mode 100644
index d1e4a07..0000000
--- a/test/data/enm/study-FCSV-951a4235-fe0f-30d4-8701-5fd126717490.json
+++ /dev/null
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-{
- "uuid": "FCSV-951a4235-fe0f-30d4-8701-5fd126717490",
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- "year": "2014",
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diff --git a/test/data/enm/study-FCSV-953b2cd9-f78f-3d77-9587-79781c5aca42.json b/test/data/enm/study-FCSV-953b2cd9-f78f-3d77-9587-79781c5aca42.json
deleted file mode 100644
index 30b099c..0000000
--- a/test/data/enm/study-FCSV-953b2cd9-f78f-3d77-9587-79781c5aca42.json
+++ /dev/null
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-{
- "uuid": "FCSV-953b2cd9-f78f-3d77-9587-79781c5aca42",
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- },
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- "year": "2014",
- "owner": null
- },
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- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
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diff --git a/test/data/enm/study-FCSV-957da91b-298d-31a0-b950-1cb727cd3079.json b/test/data/enm/study-FCSV-957da91b-298d-31a0-b950-1cb727cd3079.json
deleted file mode 100644
index 340c77c..0000000
--- a/test/data/enm/study-FCSV-957da91b-298d-31a0-b950-1cb727cd3079.json
+++ /dev/null
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-{
- "uuid": "FCSV-957da91b-298d-31a0-b950-1cb727cd3079",
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- "year": "2014",
- "owner": null
- },
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- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
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diff --git a/test/data/enm/study-FCSV-95f29c87-d4c7-31ca-8274-dff74479ef24.json b/test/data/enm/study-FCSV-95f29c87-d4c7-31ca-8274-dff74479ef24.json
deleted file mode 100644
index f57710d..0000000
--- a/test/data/enm/study-FCSV-95f29c87-d4c7-31ca-8274-dff74479ef24.json
+++ /dev/null
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-{
- "uuid": "FCSV-95f29c87-d4c7-31ca-8274-dff74479ef24",
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diff --git a/test/data/enm/study-FCSV-9613e875-e726-367c-bac6-ccecfa1bee1e.json b/test/data/enm/study-FCSV-9613e875-e726-367c-bac6-ccecfa1bee1e.json
deleted file mode 100644
index 55d7f7e..0000000
--- a/test/data/enm/study-FCSV-9613e875-e726-367c-bac6-ccecfa1bee1e.json
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-{
- "uuid": "FCSV-9613e875-e726-367c-bac6-ccecfa1bee1e",
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diff --git a/test/data/enm/study-FCSV-96162508-fde3-3aef-a932-6d8518f797df.json b/test/data/enm/study-FCSV-96162508-fde3-3aef-a932-6d8518f797df.json
deleted file mode 100644
index 1b5df23..0000000
--- a/test/data/enm/study-FCSV-96162508-fde3-3aef-a932-6d8518f797df.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/study-FCSV-96196eb8-e43b-37db-b38d-7520995423b1.json b/test/data/enm/study-FCSV-96196eb8-e43b-37db-b38d-7520995423b1.json
deleted file mode 100644
index a0370c0..0000000
--- a/test/data/enm/study-FCSV-96196eb8-e43b-37db-b38d-7520995423b1.json
+++ /dev/null
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-{
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- "year": "2014",
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- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
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diff --git a/test/data/enm/study-FCSV-961fe8aa-11d7-3151-93ab-ec1898f4b37f.json b/test/data/enm/study-FCSV-961fe8aa-11d7-3151-93ab-ec1898f4b37f.json
deleted file mode 100644
index 5542c2e..0000000
--- a/test/data/enm/study-FCSV-961fe8aa-11d7-3151-93ab-ec1898f4b37f.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-961fe8aa-11d7-3151-93ab-ec1898f4b37f",
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- "year": "2014",
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-96a18bc9-fa4e-3f5e-87e2-7216b60bd9ce.json b/test/data/enm/study-FCSV-96a18bc9-fa4e-3f5e-87e2-7216b60bd9ce.json
deleted file mode 100644
index 425bfa5..0000000
--- a/test/data/enm/study-FCSV-96a18bc9-fa4e-3f5e-87e2-7216b60bd9ce.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-96a18bc9-fa4e-3f5e-87e2-7216b60bd9ce",
- "owner": {
- "substance": {
- "uuid": "FCSV-c975883b-640e-38a6-aabe-7596e3abcd95"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -18.3,
- "errQualifier": "sd",
- "errorValue": 1.69
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -7.57,
- "errQualifier": "sd",
- "errorValue": 0.38
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-96a3906a-6a82-397e-8da6-070b26c9f736.json b/test/data/enm/study-FCSV-96a3906a-6a82-397e-8da6-070b26c9f736.json
deleted file mode 100644
index f273c70..0000000
--- a/test/data/enm/study-FCSV-96a3906a-6a82-397e-8da6-070b26c9f736.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-96a3906a-6a82-397e-8da6-070b26c9f736",
- "owner": {
- "substance": {
- "uuid": "FCSV-9043e884-a5ba-3fa6-a103-dee0c7b1b3dd"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 3.02,
- "errQualifier": "sd",
- "errorValue": 0.55
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-96c843f5-ebf0-38e0-9b1a-be1053da0c6f.json b/test/data/enm/study-FCSV-96c843f5-ebf0-38e0-9b1a-be1053da0c6f.json
deleted file mode 100644
index 47f62b1..0000000
--- a/test/data/enm/study-FCSV-96c843f5-ebf0-38e0-9b1a-be1053da0c6f.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-96c843f5-ebf0-38e0-9b1a-be1053da0c6f",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc2c755f-9eee-30e3-9e98-1fbb2397c980"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 456.87,
- "errQualifier": "sd",
- "errorValue": 1.993
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.029
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-96e69e8a-2d57-36da-a29e-fb25655bee5a.json b/test/data/enm/study-FCSV-96e69e8a-2d57-36da-a29e-fb25655bee5a.json
deleted file mode 100644
index 9345e18..0000000
--- a/test/data/enm/study-FCSV-96e69e8a-2d57-36da-a29e-fb25655bee5a.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-96e69e8a-2d57-36da-a29e-fb25655bee5a",
- "owner": {
- "substance": {
- "uuid": "FCSV-a7dbc5da-6ccd-3df5-b2f1-467f625a08cb"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "4-Mercaptobenzoic acid"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-96f2e687-cfda-3ad9-a825-ce963f793662.json b/test/data/enm/study-FCSV-96f2e687-cfda-3ad9-a825-ce963f793662.json
deleted file mode 100644
index 3244f71..0000000
--- a/test/data/enm/study-FCSV-96f2e687-cfda-3ad9-a825-ce963f793662.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-96f2e687-cfda-3ad9-a825-ce963f793662",
- "owner": {
- "substance": {
- "uuid": "FCSV-43f0ea59-aa2f-31d8-8d87-19c95ec9be18"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-971af5da-789c-320d-b367-7c9506135746.json b/test/data/enm/study-FCSV-971af5da-789c-320d-b367-7c9506135746.json
deleted file mode 100644
index 5179781..0000000
--- a/test/data/enm/study-FCSV-971af5da-789c-320d-b367-7c9506135746.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-971af5da-789c-320d-b367-7c9506135746",
- "owner": {
- "substance": {
- "uuid": "FCSV-06c1d24b-426b-39ec-8047-700808302325"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "16-Mercaptohexadecanoic acid"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9727c19d-603d-3c07-8643-7bbe7d32bef7.json b/test/data/enm/study-FCSV-9727c19d-603d-3c07-8643-7bbe7d32bef7.json
deleted file mode 100644
index fb94471..0000000
--- a/test/data/enm/study-FCSV-9727c19d-603d-3c07-8643-7bbe7d32bef7.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-9727c19d-603d-3c07-8643-7bbe7d32bef7",
- "owner": {
- "substance": {
- "uuid": "FCSV-4c523ea9-f3e8-32f4-9152-f73400aedb67"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 239.102,
- "errQualifier": "sd",
- "errorValue": 1.064
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.103
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-97729567-c11c-32d8-b6e8-bf50c8f16bbe.json b/test/data/enm/study-FCSV-97729567-c11c-32d8-b6e8-bf50c8f16bbe.json
deleted file mode 100644
index 2bfa197..0000000
--- a/test/data/enm/study-FCSV-97729567-c11c-32d8-b6e8-bf50c8f16bbe.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-97729567-c11c-32d8-b6e8-bf50c8f16bbe",
- "owner": {
- "substance": {
- "uuid": "FCSV-47e98c51-7508-362f-84d3-494bb124b849"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.015,
- "errQualifier": "sd",
- "errorValue": 0.007
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -6.104,
- "errQualifier": "std",
- "errorValue": 0.721
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9782038d-dde7-3c0b-afaa-7d10defc063e.json b/test/data/enm/study-FCSV-9782038d-dde7-3c0b-afaa-7d10defc063e.json
deleted file mode 100644
index 08f2219..0000000
--- a/test/data/enm/study-FCSV-9782038d-dde7-3c0b-afaa-7d10defc063e.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-9782038d-dde7-3c0b-afaa-7d10defc063e",
- "owner": {
- "substance": {
- "uuid": "FCSV-9294730f-3d55-36da-80b9-eb2df162e805"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-97a6eb15-9ac4-3d7f-9523-f8c9f864a19a.json b/test/data/enm/study-FCSV-97a6eb15-9ac4-3d7f-9523-f8c9f864a19a.json
deleted file mode 100644
index 524c967..0000000
--- a/test/data/enm/study-FCSV-97a6eb15-9ac4-3d7f-9523-f8c9f864a19a.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-97a6eb15-9ac4-3d7f-9523-f8c9f864a19a",
- "owner": {
- "substance": {
- "uuid": "FCSV-8b5b62c3-7fd2-3bba-b293-b7537e4971b1"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.055,
- "errQualifier": "sd",
- "errorValue": 0.01
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.055,
- "errQualifier": "sd",
- "errorValue": 0.012
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-97c74545-a8cd-322e-9933-a48c65d3d44b.json b/test/data/enm/study-FCSV-97c74545-a8cd-322e-9933-a48c65d3d44b.json
deleted file mode 100644
index 71a365f..0000000
--- a/test/data/enm/study-FCSV-97c74545-a8cd-322e-9933-a48c65d3d44b.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-97c74545-a8cd-322e-9933-a48c65d3d44b",
- "owner": {
- "substance": {
- "uuid": "FCSV-de6203a6-aea6-3910-8f49-598f80ab6a17"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 238.461,
- "errQualifier": "sd",
- "errorValue": 12.859
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.066
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-97e398ad-3a79-3529-bbc8-55903d7ae5c2.json b/test/data/enm/study-FCSV-97e398ad-3a79-3529-bbc8-55903d7ae5c2.json
deleted file mode 100644
index 07562cd..0000000
--- a/test/data/enm/study-FCSV-97e398ad-3a79-3529-bbc8-55903d7ae5c2.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-97e398ad-3a79-3529-bbc8-55903d7ae5c2",
- "owner": {
- "substance": {
- "uuid": "FCSV-3b96ad7a-bf2d-360d-881a-26094f498af6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.193,
- "errQualifier": "sd",
- "errorValue": 0.012
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.237,
- "errQualifier": "sd",
- "errorValue": 0.029
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-97e89a69-396c-3ba3-97ab-bb13c9589b1e.json b/test/data/enm/study-FCSV-97e89a69-396c-3ba3-97ab-bb13c9589b1e.json
deleted file mode 100644
index 9103ad6..0000000
--- a/test/data/enm/study-FCSV-97e89a69-396c-3ba3-97ab-bb13c9589b1e.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-97e89a69-396c-3ba3-97ab-bb13c9589b1e",
- "owner": {
- "substance": {
- "uuid": "FCSV-064f1803-3b9e-3f44-a5f6-60b1f573830c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Thiolated amino-poly(ethylene glycol) (3kDa)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-97ff1097-ae45-3090-b6d8-9981900a6662.json b/test/data/enm/study-FCSV-97ff1097-ae45-3090-b6d8-9981900a6662.json
deleted file mode 100644
index 7791c47..0000000
--- a/test/data/enm/study-FCSV-97ff1097-ae45-3090-b6d8-9981900a6662.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-97ff1097-ae45-3090-b6d8-9981900a6662",
- "owner": {
- "substance": {
- "uuid": "FCSV-1a71d2b3-8121-3790-a66b-774b12829bb3"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "5,5'-Dithiobis(2-nitrobenzoic acid)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-987b513e-4b32-356d-aa0b-169fae7dfe2f.json b/test/data/enm/study-FCSV-987b513e-4b32-356d-aa0b-169fae7dfe2f.json
deleted file mode 100644
index 8148d9e..0000000
--- a/test/data/enm/study-FCSV-987b513e-4b32-356d-aa0b-169fae7dfe2f.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-987b513e-4b32-356d-aa0b-169fae7dfe2f",
- "owner": {
- "substance": {
- "uuid": "FCSV-7087aac7-6f1d-320f-bfde-5897fe91af64"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 23.12,
- "errQualifier": "sd",
- "errorValue": 0.74
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 43.62,
- "errQualifier": "sd",
- "errorValue": 0.74
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23.11,
- "errQualifier": "sd",
- "errorValue": 1.15
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 36.92,
- "errQualifier": "sd",
- "errorValue": 5.92
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23.95,
- "errQualifier": "sd",
- "errorValue": 1.11
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 32.34,
- "errQualifier": "sd",
- "errorValue": 8.57
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23.95,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 47.82,
- "errQualifier": "sd",
- "errorValue": 2.66
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-98d0b3e6-885f-3e34-ae87-07518473ae59.json b/test/data/enm/study-FCSV-98d0b3e6-885f-3e34-ae87-07518473ae59.json
deleted file mode 100644
index cffeb6e..0000000
--- a/test/data/enm/study-FCSV-98d0b3e6-885f-3e34-ae87-07518473ae59.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-98d0b3e6-885f-3e34-ae87-07518473ae59",
- "owner": {
- "substance": {
- "uuid": "FCSV-80a36fc5-9a73-358c-829b-2e69eea82125"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 926.901,
- "errQualifier": "sd",
- "errorValue": 97.629
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.02
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-98f6cd25-a9ef-3cb1-aa6b-e036b0a6ec80.json b/test/data/enm/study-FCSV-98f6cd25-a9ef-3cb1-aa6b-e036b0a6ec80.json
deleted file mode 100644
index 1d674e0..0000000
--- a/test/data/enm/study-FCSV-98f6cd25-a9ef-3cb1-aa6b-e036b0a6ec80.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-98f6cd25-a9ef-3cb1-aa6b-e036b0a6ec80",
- "owner": {
- "substance": {
- "uuid": "FCSV-5c14595c-0e23-3f37-aaad-9988eba09196"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -18.46,
- "errQualifier": "sd",
- "errorValue": 4.45
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -6.78,
- "errQualifier": "sd",
- "errorValue": 1.36
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-98ff1d42-288f-3468-b84e-83f6c5910fd9.json b/test/data/enm/study-FCSV-98ff1d42-288f-3468-b84e-83f6c5910fd9.json
deleted file mode 100644
index f13f307..0000000
--- a/test/data/enm/study-FCSV-98ff1d42-288f-3468-b84e-83f6c5910fd9.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-98ff1d42-288f-3468-b84e-83f6c5910fd9",
- "owner": {
- "substance": {
- "uuid": "FCSV-f0cbcba3-1cb5-3fa5-82cc-bfd9d1afa21d"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
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- "guideline": [
- ""
- ]
- },
- "parameters": {
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- },
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- },
- "interpretation": {
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- "effects": [
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- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Peptide sequence 'CFGAILS'"
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-994df969-c9d9-31e3-b263-2d8352febabd.json b/test/data/enm/study-FCSV-994df969-c9d9-31e3-b263-2d8352febabd.json
deleted file mode 100644
index 30e5eaf..0000000
--- a/test/data/enm/study-FCSV-994df969-c9d9-31e3-b263-2d8352febabd.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-994df969-c9d9-31e3-b263-2d8352febabd",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
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- "result": {
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- "textValue": "Bis(p-sulfonatophenyl)phenylphosphine"
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diff --git a/test/data/enm/study-FCSV-99866f7f-bab4-3d6c-a903-f74e5e8b0d9c.json b/test/data/enm/study-FCSV-99866f7f-bab4-3d6c-a903-f74e5e8b0d9c.json
deleted file mode 100644
index a4f0008..0000000
--- a/test/data/enm/study-FCSV-99866f7f-bab4-3d6c-a903-f74e5e8b0d9c.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-99866f7f-bab4-3d6c-a903-f74e5e8b0d9c",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- "citation": {
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- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "PC_UNKNOWN_SECTION",
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- "title": "4.99 Physico chemical properties (other)"
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- "MEDIUM": "Human serum (Sigma #H4522)"
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- "result": {
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- "errQualifier": "sd",
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- {
- "endpoint": "Protein density",
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diff --git a/test/data/enm/study-FCSV-99884ad6-e3f0-3474-acb6-5af7c2cabf10.json b/test/data/enm/study-FCSV-99884ad6-e3f0-3474-acb6-5af7c2cabf10.json
deleted file mode 100644
index 000b30b..0000000
--- a/test/data/enm/study-FCSV-99884ad6-e3f0-3474-acb6-5af7c2cabf10.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
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diff --git a/test/data/enm/study-FCSV-9a39fe45-5ebd-30dd-adc5-22feb5317c24.json b/test/data/enm/study-FCSV-9a39fe45-5ebd-30dd-adc5-22feb5317c24.json
deleted file mode 100644
index 59c3599..0000000
--- a/test/data/enm/study-FCSV-9a39fe45-5ebd-30dd-adc5-22feb5317c24.json
+++ /dev/null
@@ -1,63 +0,0 @@
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diff --git a/test/data/enm/study-FCSV-9a70104f-07cc-392f-96cb-f81864180068.json b/test/data/enm/study-FCSV-9a70104f-07cc-392f-96cb-f81864180068.json
deleted file mode 100644
index 0658a0a..0000000
--- a/test/data/enm/study-FCSV-9a70104f-07cc-392f-96cb-f81864180068.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9ab4666b-3870-36f4-91d4-b719d5d80dbb.json b/test/data/enm/study-FCSV-9ab4666b-3870-36f4-91d4-b719d5d80dbb.json
deleted file mode 100644
index 2f79b0e..0000000
--- a/test/data/enm/study-FCSV-9ab4666b-3870-36f4-91d4-b719d5d80dbb.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-9ab4666b-3870-36f4-91d4-b719d5d80dbb",
- "owner": {
- "substance": {
- "uuid": "FCSV-f0cbcba3-1cb5-3fa5-82cc-bfd9d1afa21d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.211,
- "errQualifier": "sd",
- "errorValue": 0.005
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.225,
- "errQualifier": "sd",
- "errorValue": 0.015
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 523.87,
- "errQualifier": "sd",
- "errorValue": 0.25
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9af0f1c6-d18b-3efb-a645-60467ea20b86.json b/test/data/enm/study-FCSV-9af0f1c6-d18b-3efb-a645-60467ea20b86.json
deleted file mode 100644
index 02d36bb..0000000
--- a/test/data/enm/study-FCSV-9af0f1c6-d18b-3efb-a645-60467ea20b86.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-9af0f1c6-d18b-3efb-a645-60467ea20b86",
- "owner": {
- "substance": {
- "uuid": "FCSV-1c9a58a0-cd91-3636-8f7c-4fd886f8593a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.218,
- "errQualifier": "sd",
- "errorValue": 0.0009158
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.229,
- "errQualifier": "sd",
- "errorValue": 0.011
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 523.8,
- "errQualifier": "sd",
- "errorValue": 0.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9af19959-7d0b-3200-b5b9-1d9103a912f5.json b/test/data/enm/study-FCSV-9af19959-7d0b-3200-b5b9-1d9103a912f5.json
deleted file mode 100644
index c1c8244..0000000
--- a/test/data/enm/study-FCSV-9af19959-7d0b-3200-b5b9-1d9103a912f5.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-9af19959-7d0b-3200-b5b9-1d9103a912f5",
- "owner": {
- "substance": {
- "uuid": "FCSV-1a71d2b3-8121-3790-a66b-774b12829bb3"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.108,
- "errQualifier": "sd",
- "errorValue": 0.019
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.248,
- "errQualifier": "sd",
- "errorValue": 0.002
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9afa2281-e7e7-33e7-b234-a4a3ef415b6b.json b/test/data/enm/study-FCSV-9afa2281-e7e7-33e7-b234-a4a3ef415b6b.json
deleted file mode 100644
index 86fdb18..0000000
--- a/test/data/enm/study-FCSV-9afa2281-e7e7-33e7-b234-a4a3ef415b6b.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-9afa2281-e7e7-33e7-b234-a4a3ef415b6b",
- "owner": {
- "substance": {
- "uuid": "FCSV-3c5fb4b0-2e4e-3dae-9eb2-1dbfd202cd13"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9b05b1c3-b904-3ed3-9430-f14017c4209a.json b/test/data/enm/study-FCSV-9b05b1c3-b904-3ed3-9430-f14017c4209a.json
deleted file mode 100644
index a306b1d..0000000
--- a/test/data/enm/study-FCSV-9b05b1c3-b904-3ed3-9430-f14017c4209a.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-9b05b1c3-b904-3ed3-9430-f14017c4209a",
- "owner": {
- "substance": {
- "uuid": "FCSV-6d5b38c4-f57f-31de-b8b4-2719792f82f2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -5.01,
- "errQualifier": "sd",
- "errorValue": 4.74
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -9.26,
- "errQualifier": "sd",
- "errorValue": 0.83
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9b1c251b-6793-34bb-baad-bebe2441d970.json b/test/data/enm/study-FCSV-9b1c251b-6793-34bb-baad-bebe2441d970.json
deleted file mode 100644
index 5d5445e..0000000
--- a/test/data/enm/study-FCSV-9b1c251b-6793-34bb-baad-bebe2441d970.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-9b1c251b-6793-34bb-baad-bebe2441d970",
- "owner": {
- "substance": {
- "uuid": "FCSV-0588dd9b-6227-307f-9e6a-6b07d4717e8c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9b205fb1-8e36-340d-add7-bb7e761d99fc.json b/test/data/enm/study-FCSV-9b205fb1-8e36-340d-add7-bb7e761d99fc.json
deleted file mode 100644
index 47a9e0d..0000000
--- a/test/data/enm/study-FCSV-9b205fb1-8e36-340d-add7-bb7e761d99fc.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-9b205fb1-8e36-340d-add7-bb7e761d99fc",
- "owner": {
- "substance": {
- "uuid": "FCSV-ded649fa-97e1-3ec6-bb3d-623506389ee0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.118,
- "errQualifier": "sd",
- "errorValue": 0.021
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -3.08,
- "errQualifier": "std",
- "errorValue": 0.261
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9b21839c-d5fc-3e1d-8b3e-63eb037412f3.json b/test/data/enm/study-FCSV-9b21839c-d5fc-3e1d-8b3e-63eb037412f3.json
deleted file mode 100644
index 32cdf91..0000000
--- a/test/data/enm/study-FCSV-9b21839c-d5fc-3e1d-8b3e-63eb037412f3.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-9b21839c-d5fc-3e1d-8b3e-63eb037412f3",
- "owner": {
- "substance": {
- "uuid": "FCSV-bfa499a9-7d1a-34da-bccf-4fc30c65f03d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "2-Naphthalenethiol"
- }
- },
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "ethanolamine-modified poly(styrene-co-maleic anhydride)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9b2bb35f-82d3-300a-81f7-7c2a0ac6664c.json b/test/data/enm/study-FCSV-9b2bb35f-82d3-300a-81f7-7c2a0ac6664c.json
deleted file mode 100644
index bf85415..0000000
--- a/test/data/enm/study-FCSV-9b2bb35f-82d3-300a-81f7-7c2a0ac6664c.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-9b2bb35f-82d3-300a-81f7-7c2a0ac6664c",
- "owner": {
- "substance": {
- "uuid": "FCSV-d677545a-5079-3793-8990-4061a6b254c5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Carboxymethyl-poly(ethylene glycol)-thiol (5kDa)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9b347aa3-2a75-3295-bcac-c08fa9856727.json b/test/data/enm/study-FCSV-9b347aa3-2a75-3295-bcac-c08fa9856727.json
deleted file mode 100644
index 685e1d3..0000000
--- a/test/data/enm/study-FCSV-9b347aa3-2a75-3295-bcac-c08fa9856727.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-9b347aa3-2a75-3295-bcac-c08fa9856727",
- "owner": {
- "substance": {
- "uuid": "FCSV-0fe5f223-9c02-363c-a23c-70f1f36ffbec"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 25.22,
- "errQualifier": "sd",
- "errorValue": 5.25
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 38.8,
- "errQualifier": "sd",
- "errorValue": 0.76
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 21.32,
- "errQualifier": "sd",
- "errorValue": 1.65
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 36.99,
- "errQualifier": "sd",
- "errorValue": 1.97
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23.12,
- "errQualifier": "sd",
- "errorValue": 1.47
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 34.38,
- "errQualifier": "sd",
- "errorValue": 2.08
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23.12,
- "errQualifier": "sd",
- "errorValue": 2.53
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 41.33,
- "errQualifier": "sd",
- "errorValue": 0.82
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9b5e473c-2aea-31ea-beca-d59c2380f974.json b/test/data/enm/study-FCSV-9b5e473c-2aea-31ea-beca-d59c2380f974.json
deleted file mode 100644
index 799aff2..0000000
--- a/test/data/enm/study-FCSV-9b5e473c-2aea-31ea-beca-d59c2380f974.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-9b5e473c-2aea-31ea-beca-d59c2380f974",
- "owner": {
- "substance": {
- "uuid": "FCSV-e5b47d9a-ba9d-3310-8f92-72aad8f0364d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 38.4,
- "errQualifier": "sd",
- "errorValue": 2.5
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 10.5
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 108
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9b77bb83-76ea-3415-a89f-cb67910da456.json b/test/data/enm/study-FCSV-9b77bb83-76ea-3415-a89f-cb67910da456.json
deleted file mode 100644
index 77de766..0000000
--- a/test/data/enm/study-FCSV-9b77bb83-76ea-3415-a89f-cb67910da456.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-9b77bb83-76ea-3415-a89f-cb67910da456",
- "owner": {
- "substance": {
- "uuid": "FCSV-31bd6c7b-3247-3db9-93b6-59e0d3ecefa9"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 4.39,
- "errQualifier": "sd",
- "errorValue": 0.95
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9b7cba27-7a42-3118-900d-4b4f9a3801b8.json b/test/data/enm/study-FCSV-9b7cba27-7a42-3118-900d-4b4f9a3801b8.json
deleted file mode 100644
index 190da8c..0000000
--- a/test/data/enm/study-FCSV-9b7cba27-7a42-3118-900d-4b4f9a3801b8.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
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- "uuid": "FCSV-6d5b38c4-f57f-31de-b8b4-2719792f82f2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Hexadecyltrimethylammonium bromide"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9b8131df-0b85-32da-930a-e2c0b0fa2290.json b/test/data/enm/study-FCSV-9b8131df-0b85-32da-930a-e2c0b0fa2290.json
deleted file mode 100644
index 55cc140..0000000
--- a/test/data/enm/study-FCSV-9b8131df-0b85-32da-930a-e2c0b0fa2290.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-9b8131df-0b85-32da-930a-e2c0b0fa2290",
- "owner": {
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- "uuid": "FCSV-206b1a13-e02a-38a0-88ec-d5a8bfdabc55"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
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- },
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- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9c155e7f-e6dd-337a-b4fa-cd535cf300ff.json b/test/data/enm/study-FCSV-9c155e7f-e6dd-337a-b4fa-cd535cf300ff.json
deleted file mode 100644
index 65e8562..0000000
--- a/test/data/enm/study-FCSV-9c155e7f-e6dd-337a-b4fa-cd535cf300ff.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-9c155e7f-e6dd-337a-b4fa-cd535cf300ff",
- "owner": {
- "substance": {
- "uuid": "FCSV-9043e884-a5ba-3fa6-a103-dee0c7b1b3dd"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -33.47,
- "errQualifier": "sd",
- "errorValue": 1.4
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -9.63,
- "errQualifier": "sd",
- "errorValue": 3.83
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9c2c9362-120e-3f28-9ac6-f30979197b12.json b/test/data/enm/study-FCSV-9c2c9362-120e-3f28-9ac6-f30979197b12.json
deleted file mode 100644
index 433413e..0000000
--- a/test/data/enm/study-FCSV-9c2c9362-120e-3f28-9ac6-f30979197b12.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-9c2c9362-120e-3f28-9ac6-f30979197b12",
- "owner": {
- "substance": {
- "uuid": "FCSV-a153cba3-a82d-3e3c-bcbd-335cc5155f44"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.016,
- "errQualifier": "sd",
- "errorValue": 0.008
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -5.964,
- "errQualifier": "std",
- "errorValue": 0.705
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9c51d581-db5d-3878-9a08-d1fa3f67040e.json b/test/data/enm/study-FCSV-9c51d581-db5d-3878-9a08-d1fa3f67040e.json
deleted file mode 100644
index 5060eac..0000000
--- a/test/data/enm/study-FCSV-9c51d581-db5d-3878-9a08-d1fa3f67040e.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-9c51d581-db5d-3878-9a08-d1fa3f67040e",
- "owner": {
- "substance": {
- "uuid": "FCSV-770a2d39-1509-3c93-b28f-1d3e345de450"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
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- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -12.31,
- "errQualifier": "sd",
- "errorValue": 12.05
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -8.99,
- "errQualifier": "sd",
- "errorValue": 7.82
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9cc787d5-09ae-373b-b948-eef3684537e8.json b/test/data/enm/study-FCSV-9cc787d5-09ae-373b-b948-eef3684537e8.json
deleted file mode 100644
index b29643e..0000000
--- a/test/data/enm/study-FCSV-9cc787d5-09ae-373b-b948-eef3684537e8.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-9cc787d5-09ae-373b-b948-eef3684537e8",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc488cf3-986d-34cf-9ee7-12f98873dfe4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
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- "effects": [
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- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 44.18,
- "errQualifier": "sd",
- "errorValue": 1.24
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 64.29,
- "errQualifier": "sd",
- "errorValue": 8.69
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 42.92,
- "errQualifier": "sd",
- "errorValue": 1.53
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 33.88,
- "errQualifier": "sd",
- "errorValue": 24.37
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 46.12,
- "errQualifier": "sd",
- "errorValue": 1.76
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 24.6,
- "errQualifier": "sd",
- "errorValue": 14.79
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 46.12,
- "errQualifier": "sd",
- "errorValue": 2.06
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 81.11,
- "errQualifier": "sd",
- "errorValue": 17.64
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9ce7dc8c-aa17-385a-ae5a-dcf1e363b79c.json b/test/data/enm/study-FCSV-9ce7dc8c-aa17-385a-ae5a-dcf1e363b79c.json
deleted file mode 100644
index 6e2d561..0000000
--- a/test/data/enm/study-FCSV-9ce7dc8c-aa17-385a-ae5a-dcf1e363b79c.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-9ce7dc8c-aa17-385a-ae5a-dcf1e363b79c",
- "owner": {
- "substance": {
- "uuid": "FCSV-bdd4c371-ffec-34f1-ae5b-2c60d243e867"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": 9.82,
- "errQualifier": "sd",
- "errorValue": 2.08
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -2.23,
- "errQualifier": "sd",
- "errorValue": 3.47
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9d042091-bc23-3d3d-a515-a678b42a3978.json b/test/data/enm/study-FCSV-9d042091-bc23-3d3d-a515-a678b42a3978.json
deleted file mode 100644
index b211709..0000000
--- a/test/data/enm/study-FCSV-9d042091-bc23-3d3d-a515-a678b42a3978.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-9d042091-bc23-3d3d-a515-a678b42a3978",
- "owner": {
- "substance": {
- "uuid": "FCSV-9e599ca9-9a8f-3094-a97b-3fb35b08a82a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 610.302,
- "errQualifier": "sd",
- "errorValue": 20.846
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.026
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diff --git a/test/data/enm/study-FCSV-9d1b33fb-88c4-350b-9529-1612c945509b.json b/test/data/enm/study-FCSV-9d1b33fb-88c4-350b-9529-1612c945509b.json
deleted file mode 100644
index bce5b01..0000000
--- a/test/data/enm/study-FCSV-9d1b33fb-88c4-350b-9529-1612c945509b.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-9d1b33fb-88c4-350b-9529-1612c945509b",
- "owner": {
- "substance": {
- "uuid": "FCSV-d63a1ea0-3194-3019-a9e0-0960e63b5819"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 59.3,
- "errQualifier": "sd",
- "errorValue": 6.4
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9d458659-cc51-378d-800b-1c427e3d009d.json b/test/data/enm/study-FCSV-9d458659-cc51-378d-800b-1c427e3d009d.json
deleted file mode 100644
index 5e06d43..0000000
--- a/test/data/enm/study-FCSV-9d458659-cc51-378d-800b-1c427e3d009d.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-9d458659-cc51-378d-800b-1c427e3d009d",
- "owner": {
- "substance": {
- "uuid": "FCSV-9cc7dd73-d27f-35a0-a3f1-81a18429b76a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Thiolated L-alanine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9dfe9062-80b7-3a10-bb2a-763869bf86cc.json b/test/data/enm/study-FCSV-9dfe9062-80b7-3a10-bb2a-763869bf86cc.json
deleted file mode 100644
index 0bfedf8..0000000
--- a/test/data/enm/study-FCSV-9dfe9062-80b7-3a10-bb2a-763869bf86cc.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-9dfe9062-80b7-3a10-bb2a-763869bf86cc",
- "owner": {
- "substance": {
- "uuid": "FCSV-ef28f16c-6ab1-3d8b-b971-37c08688701f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.007,
- "errQualifier": "sd",
- "errorValue": 0.004
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -7.072,
- "errQualifier": "std",
- "errorValue": 0.765
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9e0b0af8-ae57-34b3-9037-cb235db96390.json b/test/data/enm/study-FCSV-9e0b0af8-ae57-34b3-9037-cb235db96390.json
deleted file mode 100644
index ff20c64..0000000
--- a/test/data/enm/study-FCSV-9e0b0af8-ae57-34b3-9037-cb235db96390.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-9e0b0af8-ae57-34b3-9037-cb235db96390",
- "owner": {
- "substance": {
- "uuid": "FCSV-9a56b1e5-2e22-31c4-b979-e8e9fee728c6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 42.4,
- "errQualifier": "sd",
- "errorValue": 1.21
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 64.65,
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- "errorValue": 28.48
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- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loValue": 39.16,
- "errQualifier": "sd",
- "errorValue": 4.67
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- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loValue": 135.24,
- "errQualifier": "sd",
- "errorValue": 145.01
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- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
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- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loValue": 43.53,
- "errQualifier": "sd",
- "errorValue": 6.32
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- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
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- "result": {
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- "loValue": 34.06,
- "errQualifier": "sd",
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- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
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- "result": {
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- "loValue": 43.53,
- "errQualifier": "sd",
- "errorValue": 4
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- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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diff --git a/test/data/enm/study-FCSV-9e3a6851-1887-3001-b2e6-67e9a87d1e34.json b/test/data/enm/study-FCSV-9e3a6851-1887-3001-b2e6-67e9a87d1e34.json
deleted file mode 100644
index f2f0ae9..0000000
--- a/test/data/enm/study-FCSV-9e3a6851-1887-3001-b2e6-67e9a87d1e34.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-9e3a6851-1887-3001-b2e6-67e9a87d1e34",
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- "year": "2014",
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- },
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- "category": {
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- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
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- "endpoint": "Bicinchoninic Acid (BCA) Assay",
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- "parameters": {
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- "effects": [
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diff --git a/test/data/enm/study-FCSV-9e445914-9cdf-3ae7-a99c-c6a9af8ab275.json b/test/data/enm/study-FCSV-9e445914-9cdf-3ae7-a99c-c6a9af8ab275.json
deleted file mode 100644
index 2be6c12..0000000
--- a/test/data/enm/study-FCSV-9e445914-9cdf-3ae7-a99c-c6a9af8ab275.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
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- }
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- "citation": {
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- "year": "2014",
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- },
- "protocol": {
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- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
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- "endpoint": "Bicinchoninic Acid (BCA) Assay",
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diff --git a/test/data/enm/study-FCSV-9e4a6504-53cb-3ab0-8835-d885c020d5c4.json b/test/data/enm/study-FCSV-9e4a6504-53cb-3ab0-8835-d885c020d5c4.json
deleted file mode 100644
index 735696d..0000000
--- a/test/data/enm/study-FCSV-9e4a6504-53cb-3ab0-8835-d885c020d5c4.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
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- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "PROTEOMICS_SECTION",
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- "title": "8.100 Proteomics"
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- "endpoint": "Solution-based digestion protocol for serum protein isolates",
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- ]
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- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
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- "effects": [
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- "endpoint": "Spectral counts",
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- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9ebc84cd-b14b-30e0-9899-5b178440479e.json b/test/data/enm/study-FCSV-9ebc84cd-b14b-30e0-9899-5b178440479e.json
deleted file mode 100644
index daf8a58..0000000
--- a/test/data/enm/study-FCSV-9ebc84cd-b14b-30e0-9899-5b178440479e.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-9ebc84cd-b14b-30e0-9899-5b178440479e",
- "owner": {
- "substance": {
- "uuid": "FCSV-ffe19c9e-b1a1-3f38-a149-0d587fc5b172"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9ebed2e0-7cac-3373-bd9c-2b56739c480f.json b/test/data/enm/study-FCSV-9ebed2e0-7cac-3373-bd9c-2b56739c480f.json
deleted file mode 100644
index 5e693c3..0000000
--- a/test/data/enm/study-FCSV-9ebed2e0-7cac-3373-bd9c-2b56739c480f.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-9ebed2e0-7cac-3373-bd9c-2b56739c480f",
- "owner": {
- "substance": {
- "uuid": "FCSV-cf1d4fd3-f16b-3680-96fa-0f5e4b9dd485"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.77,
- "errQualifier": "sd",
- "errorValue": 0.008
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.355,
- "errQualifier": "sd",
- "errorValue": 0.011
- }
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- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
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- "result": {
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- "loQualifier": "mean",
- "loValue": 544.1,
- "errQualifier": "sd",
- "errorValue": 12.16
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9ee6cb9a-eb47-3238-a1bf-962eb6ccedae.json b/test/data/enm/study-FCSV-9ee6cb9a-eb47-3238-a1bf-962eb6ccedae.json
deleted file mode 100644
index a95098e..0000000
--- a/test/data/enm/study-FCSV-9ee6cb9a-eb47-3238-a1bf-962eb6ccedae.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-9ee6cb9a-eb47-3238-a1bf-962eb6ccedae",
- "owner": {
- "substance": {
- "uuid": "FCSV-a153cba3-a82d-3e3c-bcbd-335cc5155f44"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
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- "r_studyResultType": "experimental result",
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- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Core size",
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- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
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- },
- "result": {
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- {
- "endpoint": "Mol/NP",
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- "PHRASEOTHER_PERCENTILE": null,
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- "result": {
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- "endpoint": "SA/NP",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
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-}
diff --git a/test/data/enm/study-FCSV-9ef1a81f-30c2-3f8b-80ad-77ab1674fad7.json b/test/data/enm/study-FCSV-9ef1a81f-30c2-3f8b-80ad-77ab1674fad7.json
deleted file mode 100644
index 0107e5f..0000000
--- a/test/data/enm/study-FCSV-9ef1a81f-30c2-3f8b-80ad-77ab1674fad7.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-9ef1a81f-30c2-3f8b-80ad-77ab1674fad7",
- "owner": {
- "substance": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.238,
- "errQualifier": "sd",
- "errorValue": 0.021
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.273,
- "errQualifier": "sd",
- "errorValue": 0.02
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
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- "result": {
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- "loQualifier": "mean",
- "loValue": 541.2,
- "errQualifier": "sd",
- "errorValue": 1.06
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9ef9b6b1-9ea4-346b-b1e1-db86dc824988.json b/test/data/enm/study-FCSV-9ef9b6b1-9ea4-346b-b1e1-db86dc824988.json
deleted file mode 100644
index d6dde7e..0000000
--- a/test/data/enm/study-FCSV-9ef9b6b1-9ea4-346b-b1e1-db86dc824988.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-9ef9b6b1-9ea4-346b-b1e1-db86dc824988",
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
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- },
- "effects": [
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- "endpoint": "ZETA POTENTIAL",
- "conditions": {
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- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -17.95,
- "errQualifier": "sd",
- "errorValue": 3.82
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -7.37,
- "errQualifier": "sd",
- "errorValue": 1.31
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9f0cc80f-3c7f-359a-9c18-4393247fbb26.json b/test/data/enm/study-FCSV-9f0cc80f-3c7f-359a-9c18-4393247fbb26.json
deleted file mode 100644
index 8b6ae3c..0000000
--- a/test/data/enm/study-FCSV-9f0cc80f-3c7f-359a-9c18-4393247fbb26.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-9f0cc80f-3c7f-359a-9c18-4393247fbb26",
- "owner": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
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- "reliability": {
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- "effects": [
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- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
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- {
- "endpoint": "Density",
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
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- "Remark": null,
- "SEQ_NUM": null
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- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
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- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
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- "SEQ_NUM": null
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- "result": {
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- "endpoint": "SA/NP",
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
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-}
diff --git a/test/data/enm/study-FCSV-9f18d505-2643-3152-ba6b-b3f6ccf2ad70.json b/test/data/enm/study-FCSV-9f18d505-2643-3152-ba6b-b3f6ccf2ad70.json
deleted file mode 100644
index 6f99587..0000000
--- a/test/data/enm/study-FCSV-9f18d505-2643-3152-ba6b-b3f6ccf2ad70.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-9f18d505-2643-3152-ba6b-b3f6ccf2ad70",
- "owner": {
- "substance": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
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- "endpoint": "",
- "guideline": [
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- ]
- },
- "parameters": {
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- "testmat_form": null
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- "reliability": {
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- "r_studyResultType": "experimental result",
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- "effects": [
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
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- },
- "result": {
- "unit": null,
- "textValue": "Stearic acid"
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diff --git a/test/data/enm/study-FCSV-9f4fa4bf-062a-3a53-ac7b-fbf743a89bae.json b/test/data/enm/study-FCSV-9f4fa4bf-062a-3a53-ac7b-fbf743a89bae.json
deleted file mode 100644
index 2967b51..0000000
--- a/test/data/enm/study-FCSV-9f4fa4bf-062a-3a53-ac7b-fbf743a89bae.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-9f4fa4bf-062a-3a53-ac7b-fbf743a89bae",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
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- },
- "parameters": {
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- },
- "result": {
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- "loQualifier": "mean",
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- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
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- "result": {
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- "loQualifier": "mean",
- "loValue": -5.14,
- "errQualifier": "sd",
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diff --git a/test/data/enm/study-FCSV-9f579199-f67c-31fb-b5b9-15ecb42b60ba.json b/test/data/enm/study-FCSV-9f579199-f67c-31fb-b5b9-15ecb42b60ba.json
deleted file mode 100644
index ba0e00f..0000000
--- a/test/data/enm/study-FCSV-9f579199-f67c-31fb-b5b9-15ecb42b60ba.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-9f579199-f67c-31fb-b5b9-15ecb42b60ba",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
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- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- },
- "effects": [
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- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 2.34,
- "errQualifier": "sd",
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- }
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diff --git a/test/data/enm/study-FCSV-9f980962-310b-31cc-b6be-d086001474b8.json b/test/data/enm/study-FCSV-9f980962-310b-31cc-b6be-d086001474b8.json
deleted file mode 100644
index ff781d0..0000000
--- a/test/data/enm/study-FCSV-9f980962-310b-31cc-b6be-d086001474b8.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-9f980962-310b-31cc-b6be-d086001474b8",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
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- },
- "reliability": {
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- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -25.26,
- "errQualifier": "sd",
- "errorValue": 3.49
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -8.5,
- "errQualifier": "sd",
- "errorValue": 0.92
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-9fceec29-b5e8-31d8-9347-dd0900364ad5.json b/test/data/enm/study-FCSV-9fceec29-b5e8-31d8-9347-dd0900364ad5.json
deleted file mode 100644
index a7cc0a5..0000000
--- a/test/data/enm/study-FCSV-9fceec29-b5e8-31d8-9347-dd0900364ad5.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-9fceec29-b5e8-31d8-9347-dd0900364ad5",
- "owner": {
- "substance": {
- "uuid": "FCSV-3adf8c83-83b1-3ffa-8868-b8527d83923b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 91.86,
- "errQualifier": "sd",
- "errorValue": 22.29
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 122.28,
- "errQualifier": "sd",
- "errorValue": 6.78
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 64.67,
- "errQualifier": "sd",
- "errorValue": 27.34
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 495.82,
- "errQualifier": "sd",
- "errorValue": 653.28
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 136.68,
- "errQualifier": "sd",
- "errorValue": 2.43
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 66.11,
- "errQualifier": "sd",
- "errorValue": 28.8
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 136.68,
- "errQualifier": "sd",
- "errorValue": 38.41
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 163.85,
- "errQualifier": "sd",
- "errorValue": 34.41
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a0467ded-c793-3223-b355-a3dc2d81b271.json b/test/data/enm/study-FCSV-a0467ded-c793-3223-b355-a3dc2d81b271.json
deleted file mode 100644
index 9bbb95d..0000000
--- a/test/data/enm/study-FCSV-a0467ded-c793-3223-b355-a3dc2d81b271.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-a0467ded-c793-3223-b355-a3dc2d81b271",
- "owner": {
- "substance": {
- "uuid": "FCSV-1c9a58a0-cd91-3636-8f7c-4fd886f8593a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 31.6,
- "errQualifier": "sd",
- "errorValue": 3.8
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a090cb6a-1e46-3973-a36a-9f8f18d6ee37.json b/test/data/enm/study-FCSV-a090cb6a-1e46-3973-a36a-9f8f18d6ee37.json
deleted file mode 100644
index 6ab0873..0000000
--- a/test/data/enm/study-FCSV-a090cb6a-1e46-3973-a36a-9f8f18d6ee37.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-a090cb6a-1e46-3973-a36a-9f8f18d6ee37",
- "owner": {
- "substance": {
- "uuid": "FCSV-d677545a-5079-3793-8990-4061a6b254c5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 45.72,
- "errQualifier": "sd",
- "errorValue": 0.75
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 44.6,
- "errQualifier": "sd",
- "errorValue": 1.54
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 46.42,
- "errQualifier": "sd",
- "errorValue": 0.53
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 43.94,
- "errQualifier": "sd",
- "errorValue": 1.24
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 50.95,
- "errQualifier": "sd",
- "errorValue": 1.38
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 41.77,
- "errQualifier": "sd",
- "errorValue": 1.76
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 50.95,
- "errQualifier": "sd",
- "errorValue": 2.45
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 46.96,
- "errQualifier": "sd",
- "errorValue": 0.37
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a094c81d-0874-36db-809a-23f015767770.json b/test/data/enm/study-FCSV-a094c81d-0874-36db-809a-23f015767770.json
deleted file mode 100644
index 52f4b3f..0000000
--- a/test/data/enm/study-FCSV-a094c81d-0874-36db-809a-23f015767770.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-a094c81d-0874-36db-809a-23f015767770",
- "owner": {
- "substance": {
- "uuid": "FCSV-ed95bb69-9fa7-3a4a-b4a4-32dd947d4d1a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 1.7,
- "errQualifier": "sd",
- "errorValue": 0.722
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a100161d-2141-3e86-ae1f-12f07b4e28ba.json b/test/data/enm/study-FCSV-a100161d-2141-3e86-ae1f-12f07b4e28ba.json
deleted file mode 100644
index 671c2fd..0000000
--- a/test/data/enm/study-FCSV-a100161d-2141-3e86-ae1f-12f07b4e28ba.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-a100161d-2141-3e86-ae1f-12f07b4e28ba",
- "owner": {
- "substance": {
- "uuid": "FCSV-ee07f574-0b80-31db-b1f2-535f6d6626b0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 830.177,
- "errQualifier": "sd",
- "errorValue": 67.762
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.053
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a1283cb8-b393-31d7-a122-17b07ffbe983.json b/test/data/enm/study-FCSV-a1283cb8-b393-31d7-a122-17b07ffbe983.json
deleted file mode 100644
index 62a9a2c..0000000
--- a/test/data/enm/study-FCSV-a1283cb8-b393-31d7-a122-17b07ffbe983.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-a1283cb8-b393-31d7-a122-17b07ffbe983",
- "owner": {
- "substance": {
- "uuid": "FCSV-05f4c488-5326-3d8a-be41-c57c468b2fa4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a14367e0-3154-3219-a63b-ded8c23594c4.json b/test/data/enm/study-FCSV-a14367e0-3154-3219-a63b-ded8c23594c4.json
deleted file mode 100644
index 92218d1..0000000
--- a/test/data/enm/study-FCSV-a14367e0-3154-3219-a63b-ded8c23594c4.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-a14367e0-3154-3219-a63b-ded8c23594c4",
- "owner": {
- "substance": {
- "uuid": "FCSV-07ecc16e-528e-3904-bb96-0812dff8ea65"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 658.749,
- "errQualifier": "sd",
- "errorValue": 40.708
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.007
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a159f6dc-8a3c-309c-ac82-ca7c4b03e8b6.json b/test/data/enm/study-FCSV-a159f6dc-8a3c-309c-ac82-ca7c4b03e8b6.json
deleted file mode 100644
index ebc0275..0000000
--- a/test/data/enm/study-FCSV-a159f6dc-8a3c-309c-ac82-ca7c4b03e8b6.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-a159f6dc-8a3c-309c-ac82-ca7c4b03e8b6",
- "owner": {
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- "uuid": "FCSV-a3c8dce5-07ab-3ca6-91a0-84072fc24aed"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
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- },
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- },
- "result": {
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- {
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- "loValue": 19.1
- }
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- {
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- "result": {
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- "loQualifier": "",
- "loValue": 197
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- {
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- "PHRASEOTHER_PERCENTILE": null,
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- "result": {
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- "endpoint": "SA/NP",
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- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
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diff --git a/test/data/enm/study-FCSV-a1cc54aa-1ed3-3c46-927b-81088d643632.json b/test/data/enm/study-FCSV-a1cc54aa-1ed3-3c46-927b-81088d643632.json
deleted file mode 100644
index cbf5b02..0000000
--- a/test/data/enm/study-FCSV-a1cc54aa-1ed3-3c46-927b-81088d643632.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-a1cc54aa-1ed3-3c46-927b-81088d643632",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
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- "loValue": 197
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- {
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- "result": {
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diff --git a/test/data/enm/study-FCSV-a22a4681-18a0-3476-bc59-d25e5544c60f.json b/test/data/enm/study-FCSV-a22a4681-18a0-3476-bc59-d25e5544c60f.json
deleted file mode 100644
index e9b3050..0000000
--- a/test/data/enm/study-FCSV-a22a4681-18a0-3476-bc59-d25e5544c60f.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-a22a4681-18a0-3476-bc59-d25e5544c60f",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
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- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- },
- "parameters": {
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- },
- "result": {
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- "loQualifier": "mean",
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- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
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- "PHRASEOTHER_PERCENTILE": null,
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- "errQualifier": "sd",
- "errorValue": 2.99
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
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- "Remark": null,
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- "result": {
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- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
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- "PHRASEOTHER_PERCENTILE": null,
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- "result": {
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- "loValue": 66.65,
- "errQualifier": "sd",
- "errorValue": 3.42
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
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- "PHRASEOTHER_PERCENTILE": null,
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- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 44.6,
- "errQualifier": "sd",
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- }
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- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
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- "result": {
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- "errQualifier": "sd",
- "errorValue": 2.96
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- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
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- "result": {
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- "loValue": 44.6,
- "errQualifier": "sd",
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- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
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- "SEQ_NUM": null
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- "result": {
- "unit": "nm",
- "loValue": 73.43,
- "errQualifier": "sd",
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- }
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diff --git a/test/data/enm/study-FCSV-a27ac896-fa14-3954-9f23-48c0a93b6ac9.json b/test/data/enm/study-FCSV-a27ac896-fa14-3954-9f23-48c0a93b6ac9.json
deleted file mode 100644
index e950c0f..0000000
--- a/test/data/enm/study-FCSV-a27ac896-fa14-3954-9f23-48c0a93b6ac9.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-a27ac896-fa14-3954-9f23-48c0a93b6ac9",
- "owner": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- },
- "citation": {
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- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
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- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
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- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
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- "result": {
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- "loValue": 0.05,
- "errQualifier": "sd",
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diff --git a/test/data/enm/study-FCSV-a29e4fd6-5280-35cb-9835-c7b61cda6cf4.json b/test/data/enm/study-FCSV-a29e4fd6-5280-35cb-9835-c7b61cda6cf4.json
deleted file mode 100644
index 2cabd10..0000000
--- a/test/data/enm/study-FCSV-a29e4fd6-5280-35cb-9835-c7b61cda6cf4.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-a29e4fd6-5280-35cb-9835-c7b61cda6cf4",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
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- "result": {
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diff --git a/test/data/enm/study-FCSV-a2dec9e7-5ad0-36ae-879d-0ad9a33a90ca.json b/test/data/enm/study-FCSV-a2dec9e7-5ad0-36ae-879d-0ad9a33a90ca.json
deleted file mode 100644
index 8eb65a5..0000000
--- a/test/data/enm/study-FCSV-a2dec9e7-5ad0-36ae-879d-0ad9a33a90ca.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-a2dec9e7-5ad0-36ae-879d-0ad9a33a90ca",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
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- "citation": {
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- "year": "2014",
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- },
- "protocol": {
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- "category": {
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- "title": "4.30 Nanomaterial surface chemistry"
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- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
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- "loValue": "FUNCTIONALIZATION"
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- },
- "result": {
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- "textValue": "N-(2-Mercaptopropionyl)glycine"
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diff --git a/test/data/enm/study-FCSV-a2f0be21-6350-3095-89f5-78d47eebd697.json b/test/data/enm/study-FCSV-a2f0be21-6350-3095-89f5-78d47eebd697.json
deleted file mode 100644
index 279997f..0000000
--- a/test/data/enm/study-FCSV-a2f0be21-6350-3095-89f5-78d47eebd697.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
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- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
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- },
- "protocol": {
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- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
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- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
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- {
- "endpoint": "Polydispersity index",
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diff --git a/test/data/enm/study-FCSV-a38399b2-73ba-3121-8ef2-19adb31090dd.json b/test/data/enm/study-FCSV-a38399b2-73ba-3121-8ef2-19adb31090dd.json
deleted file mode 100644
index 800acbe..0000000
--- a/test/data/enm/study-FCSV-a38399b2-73ba-3121-8ef2-19adb31090dd.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-a38399b2-73ba-3121-8ef2-19adb31090dd",
- "owner": {
- "substance": {
- "uuid": "FCSV-ccd3915e-0b1d-38f4-98b3-02b1a16aace7"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 38.4,
- "errQualifier": "sd",
- "errorValue": 2.5
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 10.5
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 108
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a3ab45ec-c8c4-38a3-b305-e6d950b4796d.json b/test/data/enm/study-FCSV-a3ab45ec-c8c4-38a3-b305-e6d950b4796d.json
deleted file mode 100644
index 7ec8978..0000000
--- a/test/data/enm/study-FCSV-a3ab45ec-c8c4-38a3-b305-e6d950b4796d.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-a3ab45ec-c8c4-38a3-b305-e6d950b4796d",
- "owner": {
- "substance": {
- "uuid": "FCSV-d1731b11-29a7-3b39-bf48-000a31d9c46b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": 19.6,
- "errQualifier": "sd",
- "errorValue": 2.4
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -6.52,
- "errQualifier": "sd",
- "errorValue": 1.57
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a3c15653-f37a-380b-949a-105c7ad1b4c9.json b/test/data/enm/study-FCSV-a3c15653-f37a-380b-949a-105c7ad1b4c9.json
deleted file mode 100644
index ffa316b..0000000
--- a/test/data/enm/study-FCSV-a3c15653-f37a-380b-949a-105c7ad1b4c9.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-a3c15653-f37a-380b-949a-105c7ad1b4c9",
- "owner": {
- "substance": {
- "uuid": "FCSV-05f4c488-5326-3d8a-be41-c57c468b2fa4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.04,
- "errQualifier": "sd",
- "errorValue": 0.004
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.044,
- "errQualifier": "sd",
- "errorValue": 0.012
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a3cedaf8-6eed-3420-9c64-a74d106757c9.json b/test/data/enm/study-FCSV-a3cedaf8-6eed-3420-9c64-a74d106757c9.json
deleted file mode 100644
index d3cab47..0000000
--- a/test/data/enm/study-FCSV-a3cedaf8-6eed-3420-9c64-a74d106757c9.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-a3cedaf8-6eed-3420-9c64-a74d106757c9",
- "owner": {
- "substance": {
- "uuid": "FCSV-c975883b-640e-38a6-aabe-7596e3abcd95"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 3.302,
- "errQualifier": "sd",
- "errorValue": 0.781
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a4005882-10f8-3b4f-943a-1b341fede94a.json b/test/data/enm/study-FCSV-a4005882-10f8-3b4f-943a-1b341fede94a.json
deleted file mode 100644
index dcbfe74..0000000
--- a/test/data/enm/study-FCSV-a4005882-10f8-3b4f-943a-1b341fede94a.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-a4005882-10f8-3b4f-943a-1b341fede94a",
- "owner": {
- "substance": {
- "uuid": "FCSV-6046fc9f-3c73-3215-97e2-4ddcf85f41da"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 38.4,
- "errQualifier": "sd",
- "errorValue": 2.5
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 10.5
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 108
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
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- "result": {
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- "loValue": 0.0
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- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a4243298-b647-3aea-a7a9-caaccf4ca60a.json b/test/data/enm/study-FCSV-a4243298-b647-3aea-a7a9-caaccf4ca60a.json
deleted file mode 100644
index 134f1cd..0000000
--- a/test/data/enm/study-FCSV-a4243298-b647-3aea-a7a9-caaccf4ca60a.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-a4243298-b647-3aea-a7a9-caaccf4ca60a",
- "owner": {
- "substance": {
- "uuid": "FCSV-6d5b38c4-f57f-31de-b8b4-2719792f82f2"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- "effects": [
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- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.465,
- "errQualifier": "sd",
- "errorValue": 0.018
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 0.371,
- "errQualifier": "sd",
- "errorValue": 0.013
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-a4336b7e-1a31-3596-b140-52f7ed53994a.json b/test/data/enm/study-FCSV-a4336b7e-1a31-3596-b140-52f7ed53994a.json
deleted file mode 100644
index 609a538..0000000
--- a/test/data/enm/study-FCSV-a4336b7e-1a31-3596-b140-52f7ed53994a.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-a4336b7e-1a31-3596-b140-52f7ed53994a",
- "owner": {
- "substance": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
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- "interpretation": {
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- "effects": [
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- "endpoint": "Core size",
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
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- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
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- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
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- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
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- {
- "endpoint": "Mol/NP",
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- "Remark": null,
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- "result": {
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- "endpoint": "SA/NP",
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- "PHRASEOTHER_PERCENTILE": null,
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- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-a4431f3e-c6c7-32fb-8407-c0e72cba3e4a.json b/test/data/enm/study-FCSV-a4431f3e-c6c7-32fb-8407-c0e72cba3e4a.json
deleted file mode 100644
index 7edfa29..0000000
--- a/test/data/enm/study-FCSV-a4431f3e-c6c7-32fb-8407-c0e72cba3e4a.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-a4431f3e-c6c7-32fb-8407-c0e72cba3e4a",
- "owner": {
- "substance": {
- "uuid": "FCSV-f3d54c07-7dd4-3124-b5bf-341eb9eb4e82"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
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- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "11-Amino-1-undecanethiol"
- }
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diff --git a/test/data/enm/study-FCSV-a4dbbfaa-5c34-3983-8d56-e327c7e4d1fc.json b/test/data/enm/study-FCSV-a4dbbfaa-5c34-3983-8d56-e327c7e4d1fc.json
deleted file mode 100644
index 19d4043..0000000
--- a/test/data/enm/study-FCSV-a4dbbfaa-5c34-3983-8d56-e327c7e4d1fc.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-a4dbbfaa-5c34-3983-8d56-e327c7e4d1fc",
- "owner": {
- "substance": {
- "uuid": "FCSV-815715e8-0cc8-3641-897c-4530d961cfe0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 59.3,
- "errQualifier": "sd",
- "errorValue": 6.4
- }
- },
- {
- "endpoint": "Density",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
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- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
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- }
- },
- {
- "endpoint": "Mol/NP",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a4efd232-f947-3b48-9734-b9f036b21630.json b/test/data/enm/study-FCSV-a4efd232-f947-3b48-9734-b9f036b21630.json
deleted file mode 100644
index e4ffeda..0000000
--- a/test/data/enm/study-FCSV-a4efd232-f947-3b48-9734-b9f036b21630.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-a4efd232-f947-3b48-9734-b9f036b21630",
- "owner": {
- "substance": {
- "uuid": "FCSV-31bd6c7b-3247-3db9-93b6-59e0d3ecefa9"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a4fdcb02-bb15-30e0-8b87-792d0b2b86bf.json b/test/data/enm/study-FCSV-a4fdcb02-bb15-30e0-8b87-792d0b2b86bf.json
deleted file mode 100644
index 9c8e490..0000000
--- a/test/data/enm/study-FCSV-a4fdcb02-bb15-30e0-8b87-792d0b2b86bf.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-a4fdcb02-bb15-30e0-8b87-792d0b2b86bf",
- "owner": {
- "substance": {
- "uuid": "FCSV-eec391e5-065c-32c1-89ca-3eb40260c1a8"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 7.78,
- "errQualifier": "sd",
- "errorValue": 0.21
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a5014279-0892-31fc-b1b3-00aeb4591ea2.json b/test/data/enm/study-FCSV-a5014279-0892-31fc-b1b3-00aeb4591ea2.json
deleted file mode 100644
index 0c687c5..0000000
--- a/test/data/enm/study-FCSV-a5014279-0892-31fc-b1b3-00aeb4591ea2.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-a5014279-0892-31fc-b1b3-00aeb4591ea2",
- "owner": {
- "substance": {
- "uuid": "FCSV-74492618-7ff6-39c9-b396-8d7465109083"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 26.27,
- "errQualifier": "sd",
- "errorValue": 0.95
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 29.68,
- "errQualifier": "sd",
- "errorValue": 4.28
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 25.78,
- "errQualifier": "sd",
- "errorValue": 0.25
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 26.52,
- "errQualifier": "sd",
- "errorValue": 0.65
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 29.82,
- "errQualifier": "sd",
- "errorValue": 0.24
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 25.06,
- "errQualifier": "sd",
- "errorValue": 0.92
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 29.82,
- "errQualifier": "sd",
- "errorValue": 2.09
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31.06,
- "errQualifier": "sd",
- "errorValue": 4.87
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a531e655-98ec-3e38-9e22-07456321bcaa.json b/test/data/enm/study-FCSV-a531e655-98ec-3e38-9e22-07456321bcaa.json
deleted file mode 100644
index 89a8388..0000000
--- a/test/data/enm/study-FCSV-a531e655-98ec-3e38-9e22-07456321bcaa.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-a531e655-98ec-3e38-9e22-07456321bcaa",
- "owner": {
- "substance": {
- "uuid": "FCSV-de6203a6-aea6-3910-8f49-598f80ab6a17"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a537ec5f-208d-3f9a-b604-7b49c228b181.json b/test/data/enm/study-FCSV-a537ec5f-208d-3f9a-b604-7b49c228b181.json
deleted file mode 100644
index bd0acb7..0000000
--- a/test/data/enm/study-FCSV-a537ec5f-208d-3f9a-b604-7b49c228b181.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-a537ec5f-208d-3f9a-b604-7b49c228b181",
- "owner": {
- "substance": {
- "uuid": "FCSV-43f0ea59-aa2f-31d8-8d87-19c95ec9be18"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -28.93,
- "errQualifier": "sd",
- "errorValue": 5.73
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -7.91,
- "errQualifier": "sd",
- "errorValue": 2.11
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a5396268-36b4-3fdb-a408-cf8a31efd357.json b/test/data/enm/study-FCSV-a5396268-36b4-3fdb-a408-cf8a31efd357.json
deleted file mode 100644
index 3338eac..0000000
--- a/test/data/enm/study-FCSV-a5396268-36b4-3fdb-a408-cf8a31efd357.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-a5396268-36b4-3fdb-a408-cf8a31efd357",
- "owner": {
- "substance": {
- "uuid": "FCSV-770a2d39-1509-3c93-b28f-1d3e345de450"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 239.634,
- "errQualifier": "sd",
- "errorValue": 5.259
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.007
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a551d14c-a9d1-3062-b9c8-53f552675559.json b/test/data/enm/study-FCSV-a551d14c-a9d1-3062-b9c8-53f552675559.json
deleted file mode 100644
index 8061391..0000000
--- a/test/data/enm/study-FCSV-a551d14c-a9d1-3062-b9c8-53f552675559.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-a551d14c-a9d1-3062-b9c8-53f552675559",
- "owner": {
- "substance": {
- "uuid": "FCSV-4c523ea9-f3e8-32f4-9152-f73400aedb67"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.017,
- "errQualifier": "sd",
- "errorValue": 0.002
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -5.916,
- "errQualifier": "std",
- "errorValue": 0.17
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a56fa628-7e02-3625-abe3-e754f2b461df.json b/test/data/enm/study-FCSV-a56fa628-7e02-3625-abe3-e754f2b461df.json
deleted file mode 100644
index 93dcee7..0000000
--- a/test/data/enm/study-FCSV-a56fa628-7e02-3625-abe3-e754f2b461df.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-a56fa628-7e02-3625-abe3-e754f2b461df",
- "owner": {
- "substance": {
- "uuid": "FCSV-a4df7f03-50e1-387c-b0b7-2ce62ed03a8c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 488.293,
- "errQualifier": "sd",
- "errorValue": 69.992
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.042
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a629ce23-75b0-3d50-a53d-f0db8f1347fc.json b/test/data/enm/study-FCSV-a629ce23-75b0-3d50-a53d-f0db8f1347fc.json
deleted file mode 100644
index bb184a0..0000000
--- a/test/data/enm/study-FCSV-a629ce23-75b0-3d50-a53d-f0db8f1347fc.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-a629ce23-75b0-3d50-a53d-f0db8f1347fc",
- "owner": {
- "substance": {
- "uuid": "FCSV-de6203a6-aea6-3910-8f49-598f80ab6a17"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "2-Naphthalenethiol"
- }
- },
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "urea-modified poly(styrene co-maleic anhydride)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a62b0c7f-b293-39e7-b190-881f0891e7a7.json b/test/data/enm/study-FCSV-a62b0c7f-b293-39e7-b190-881f0891e7a7.json
deleted file mode 100644
index 02b672f..0000000
--- a/test/data/enm/study-FCSV-a62b0c7f-b293-39e7-b190-881f0891e7a7.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-a62b0c7f-b293-39e7-b190-881f0891e7a7",
- "owner": {
- "substance": {
- "uuid": "FCSV-fb5e6048-8ee1-351d-915b-d1669681357e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": 25.83,
- "errQualifier": "sd",
- "errorValue": 4.08
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -5.46,
- "errQualifier": "sd",
- "errorValue": 1.39
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a6402965-8825-357d-8e12-b9044fab864d.json b/test/data/enm/study-FCSV-a6402965-8825-357d-8e12-b9044fab864d.json
deleted file mode 100644
index a57478f..0000000
--- a/test/data/enm/study-FCSV-a6402965-8825-357d-8e12-b9044fab864d.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-a6402965-8825-357d-8e12-b9044fab864d",
- "owner": {
- "substance": {
- "uuid": "FCSV-9b1b9ad6-e41d-3ddd-8bea-561af1fc27aa"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.015,
- "errQualifier": "sd",
- "errorValue": 0.004
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -6.022,
- "errQualifier": "std",
- "errorValue": 0.412
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a6519c2d-d4e3-38c2-bca1-ea988a1b8b64.json b/test/data/enm/study-FCSV-a6519c2d-d4e3-38c2-bca1-ea988a1b8b64.json
deleted file mode 100644
index 078ed06..0000000
--- a/test/data/enm/study-FCSV-a6519c2d-d4e3-38c2-bca1-ea988a1b8b64.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-a6519c2d-d4e3-38c2-bca1-ea988a1b8b64",
- "owner": {
- "substance": {
- "uuid": "FCSV-c975883b-640e-38a6-aabe-7596e3abcd95"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.498,
- "errQualifier": "sd",
- "errorValue": 0.048
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.363,
- "errQualifier": "sd",
- "errorValue": 0.025
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 553.17,
- "errQualifier": "sd",
- "errorValue": 8.87
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a6b7cb43-d3bd-3335-a8a2-2a437223c310.json b/test/data/enm/study-FCSV-a6b7cb43-d3bd-3335-a8a2-2a437223c310.json
deleted file mode 100644
index 4c7fb14..0000000
--- a/test/data/enm/study-FCSV-a6b7cb43-d3bd-3335-a8a2-2a437223c310.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-a6b7cb43-d3bd-3335-a8a2-2a437223c310",
- "owner": {
- "substance": {
- "uuid": "FCSV-5c14595c-0e23-3f37-aaad-9988eba09196"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.125,
- "errQualifier": "sd",
- "errorValue": 0.031
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.193,
- "errQualifier": "sd",
- "errorValue": 0.016
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a6c55b2b-c457-36a2-94d7-dd332e77b754.json b/test/data/enm/study-FCSV-a6c55b2b-c457-36a2-94d7-dd332e77b754.json
deleted file mode 100644
index e817514..0000000
--- a/test/data/enm/study-FCSV-a6c55b2b-c457-36a2-94d7-dd332e77b754.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-a6c55b2b-c457-36a2-94d7-dd332e77b754",
- "owner": {
- "substance": {
- "uuid": "FCSV-064f1803-3b9e-3f44-a5f6-60b1f573830c"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a6dd6e78-23df-3ef5-b7bd-dda5d65b7d6c.json b/test/data/enm/study-FCSV-a6dd6e78-23df-3ef5-b7bd-dda5d65b7d6c.json
deleted file mode 100644
index d7aa87b..0000000
--- a/test/data/enm/study-FCSV-a6dd6e78-23df-3ef5-b7bd-dda5d65b7d6c.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-a6dd6e78-23df-3ef5-b7bd-dda5d65b7d6c",
- "owner": {
- "substance": {
- "uuid": "FCSV-ef28f16c-6ab1-3d8b-b971-37c08688701f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "(11-Mercaptoundecyl)tetra(ethylene glycol)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a77d2aa5-afab-3be9-9a31-715dadcecef7.json b/test/data/enm/study-FCSV-a77d2aa5-afab-3be9-9a31-715dadcecef7.json
deleted file mode 100644
index c6f6d14..0000000
--- a/test/data/enm/study-FCSV-a77d2aa5-afab-3be9-9a31-715dadcecef7.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-a77d2aa5-afab-3be9-9a31-715dadcecef7",
- "owner": {
- "substance": {
- "uuid": "FCSV-6aea0743-7abb-3448-85ce-961b67fca97f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "pH": null
- },
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- "loQualifier": "mean",
- "loValue": 19.11,
- "errQualifier": "sd",
- "errorValue": 7.2
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -11.47,
- "errQualifier": "sd",
- "errorValue": 3.18
- }
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diff --git a/test/data/enm/study-FCSV-a78046c2-0eba-3fb2-a37a-65b834e32fa9.json b/test/data/enm/study-FCSV-a78046c2-0eba-3fb2-a37a-65b834e32fa9.json
deleted file mode 100644
index c42e11e..0000000
--- a/test/data/enm/study-FCSV-a78046c2-0eba-3fb2-a37a-65b834e32fa9.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-a78046c2-0eba-3fb2-a37a-65b834e32fa9",
- "owner": {
- "substance": {
- "uuid": "FCSV-47e98c51-7508-362f-84d3-494bb124b849"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
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- "reliability": {
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 4.017,
- "errQualifier": "sd",
- "errorValue": 1.215
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-a78082d8-e193-3038-8cba-e6649277a2b1.json b/test/data/enm/study-FCSV-a78082d8-e193-3038-8cba-e6649277a2b1.json
deleted file mode 100644
index 09589f3..0000000
--- a/test/data/enm/study-FCSV-a78082d8-e193-3038-8cba-e6649277a2b1.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-a78082d8-e193-3038-8cba-e6649277a2b1",
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
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- ""
- ]
- },
- "parameters": {
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- "r_studyResultType": "experimental result",
- "r_value": null
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- "interpretation": {
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- "effects": [
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- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
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- "loValue": "FUNCTIONALIZATION"
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- },
- "result": {
- "unit": null,
- "textValue": "Methoxy-poly(ethylene glycol)-thiol (5kDa)"
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- ]
-}
diff --git a/test/data/enm/study-FCSV-a785cb40-279d-3cbd-b758-43cb3757970e.json b/test/data/enm/study-FCSV-a785cb40-279d-3cbd-b758-43cb3757970e.json
deleted file mode 100644
index 5387bb0..0000000
--- a/test/data/enm/study-FCSV-a785cb40-279d-3cbd-b758-43cb3757970e.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-a785cb40-279d-3cbd-b758-43cb3757970e",
- "owner": {
- "substance": {
- "uuid": "FCSV-8e1a76df-a12d-3254-ae6b-28e20153ef59"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
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- "effects": [
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- },
- "result": {
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- "loQualifier": "mean",
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- {
- "endpoint": "Density",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
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- "Remark": null,
- "SEQ_NUM": null
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- "result": {
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- {
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- "endpoint": "SA/NP",
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- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
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diff --git a/test/data/enm/study-FCSV-a7c6607a-acba-365c-bb5f-d14c26542dc9.json b/test/data/enm/study-FCSV-a7c6607a-acba-365c-bb5f-d14c26542dc9.json
deleted file mode 100644
index b529190..0000000
--- a/test/data/enm/study-FCSV-a7c6607a-acba-365c-bb5f-d14c26542dc9.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-a7c6607a-acba-365c-bb5f-d14c26542dc9",
- "owner": {
- "substance": {
- "uuid": "FCSV-99734121-3347-3d4e-9bc6-67956450b140"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 0.209,
- "errQualifier": "sd",
- "errorValue": 0.061
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.288,
- "errQualifier": "sd",
- "errorValue": 0.004
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
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- "result": {
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- "loQualifier": "mean",
- "loValue": 523.33,
- "errQualifier": "sd",
- "errorValue": 0.15
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- ]
-}
diff --git a/test/data/enm/study-FCSV-a7e33cb1-4b0a-3477-b057-ae9ac5fc7e03.json b/test/data/enm/study-FCSV-a7e33cb1-4b0a-3477-b057-ae9ac5fc7e03.json
deleted file mode 100644
index b634ebb..0000000
--- a/test/data/enm/study-FCSV-a7e33cb1-4b0a-3477-b057-ae9ac5fc7e03.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-a7e33cb1-4b0a-3477-b057-ae9ac5fc7e03",
- "owner": {
- "substance": {
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
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- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforMSDS": "false",
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- },
- "interpretation": {
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- "effects": [
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- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 4.791,
- "errQualifier": "sd",
- "errorValue": 0.642
- }
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diff --git a/test/data/enm/study-FCSV-a7f00478-653b-34ba-bb59-2febd1aaaa9d.json b/test/data/enm/study-FCSV-a7f00478-653b-34ba-bb59-2febd1aaaa9d.json
deleted file mode 100644
index 97d18ce..0000000
--- a/test/data/enm/study-FCSV-a7f00478-653b-34ba-bb59-2febd1aaaa9d.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-a7f00478-653b-34ba-bb59-2febd1aaaa9d",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
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- "r_studyResultType": "experimental result",
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- "effects": [
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- "result": {
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- "loValue": 14.9,
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- {
- "endpoint": "Density",
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
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- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
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- "result": {
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- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
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diff --git a/test/data/enm/study-FCSV-a855ae96-25bc-3573-bb32-1f5f22ff6d3b.json b/test/data/enm/study-FCSV-a855ae96-25bc-3573-bb32-1f5f22ff6d3b.json
deleted file mode 100644
index f9dc482..0000000
--- a/test/data/enm/study-FCSV-a855ae96-25bc-3573-bb32-1f5f22ff6d3b.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-a855ae96-25bc-3573-bb32-1f5f22ff6d3b",
- "owner": {
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
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- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- "parameters": {
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- "loQualifier": "mean",
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- {
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- "errQualifier": "sd",
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- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
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- "loQualifier": "mean",
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- "errQualifier": "sd",
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-}
diff --git a/test/data/enm/study-FCSV-a8a82abc-c5f3-37d8-80ae-4cd03d5ae33f.json b/test/data/enm/study-FCSV-a8a82abc-c5f3-37d8-80ae-4cd03d5ae33f.json
deleted file mode 100644
index 6513a0a..0000000
--- a/test/data/enm/study-FCSV-a8a82abc-c5f3-37d8-80ae-4cd03d5ae33f.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-a8a82abc-c5f3-37d8-80ae-4cd03d5ae33f",
- "owner": {
- "substance": {
- "uuid": "FCSV-0fe5f223-9c02-363c-a23c-70f1f36ffbec"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 259.044,
- "errQualifier": "sd",
- "errorValue": 9.797
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.049
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a8b23568-058a-382d-8126-f0ef820c2960.json b/test/data/enm/study-FCSV-a8b23568-058a-382d-8126-f0ef820c2960.json
deleted file mode 100644
index a01567f..0000000
--- a/test/data/enm/study-FCSV-a8b23568-058a-382d-8126-f0ef820c2960.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-a8b23568-058a-382d-8126-f0ef820c2960",
- "owner": {
- "substance": {
- "uuid": "FCSV-a3c8dce5-07ab-3ca6-91a0-84072fc24aed"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a8c44672-9c98-3c92-aa09-3798e1ef9c32.json b/test/data/enm/study-FCSV-a8c44672-9c98-3c92-aa09-3798e1ef9c32.json
deleted file mode 100644
index fd29e7d..0000000
--- a/test/data/enm/study-FCSV-a8c44672-9c98-3c92-aa09-3798e1ef9c32.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-a8c44672-9c98-3c92-aa09-3798e1ef9c32",
- "owner": {
- "substance": {
- "uuid": "FCSV-acbbde2e-0238-3d4c-a2f4-7629ad478e6a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Hexadecylamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a8e58e9b-6aaa-38cd-b4c5-1d133b631548.json b/test/data/enm/study-FCSV-a8e58e9b-6aaa-38cd-b4c5-1d133b631548.json
deleted file mode 100644
index 08e03d3..0000000
--- a/test/data/enm/study-FCSV-a8e58e9b-6aaa-38cd-b4c5-1d133b631548.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-a8e58e9b-6aaa-38cd-b4c5-1d133b631548",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f5e6fcb-23b9-3222-aa6e-4afcbba47715"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a92ad728-db13-3acf-b227-47a8ff3c12cb.json b/test/data/enm/study-FCSV-a92ad728-db13-3acf-b227-47a8ff3c12cb.json
deleted file mode 100644
index fe53df8..0000000
--- a/test/data/enm/study-FCSV-a92ad728-db13-3acf-b227-47a8ff3c12cb.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-a92ad728-db13-3acf-b227-47a8ff3c12cb",
- "owner": {
- "substance": {
- "uuid": "FCSV-de6203a6-aea6-3910-8f49-598f80ab6a17"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.118,
- "errQualifier": "sd",
- "errorValue": 0.017
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.132,
- "errQualifier": "sd",
- "errorValue": 0.021
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a970f99e-89a9-3627-9d59-5b63e81c6e81.json b/test/data/enm/study-FCSV-a970f99e-89a9-3627-9d59-5b63e81c6e81.json
deleted file mode 100644
index d7c6b23..0000000
--- a/test/data/enm/study-FCSV-a970f99e-89a9-3627-9d59-5b63e81c6e81.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-a970f99e-89a9-3627-9d59-5b63e81c6e81",
- "owner": {
- "substance": {
- "uuid": "FCSV-b38f2b71-aa2d-3d72-af88-166a60bedee2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Pluronic F-127"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a991fc1c-8d34-327a-be9a-908e45ffb9f8.json b/test/data/enm/study-FCSV-a991fc1c-8d34-327a-be9a-908e45ffb9f8.json
deleted file mode 100644
index 18d4682..0000000
--- a/test/data/enm/study-FCSV-a991fc1c-8d34-327a-be9a-908e45ffb9f8.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-a991fc1c-8d34-327a-be9a-908e45ffb9f8",
- "owner": {
- "substance": {
- "uuid": "FCSV-1c9a58a0-cd91-3636-8f7c-4fd886f8593a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 2.4,
- "errQualifier": "sd",
- "errorValue": 1.085
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a9c33c94-9433-3c98-8239-ddf4aad3643f.json b/test/data/enm/study-FCSV-a9c33c94-9433-3c98-8239-ddf4aad3643f.json
deleted file mode 100644
index 127a782..0000000
--- a/test/data/enm/study-FCSV-a9c33c94-9433-3c98-8239-ddf4aad3643f.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-a9c33c94-9433-3c98-8239-ddf4aad3643f",
- "owner": {
- "substance": {
- "uuid": "FCSV-fb5e6048-8ee1-351d-915b-d1669681357e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "1-Dodecanethiol"
- }
- },
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "octadecylamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a9d1fd9d-7074-30f5-b00c-fd649414610d.json b/test/data/enm/study-FCSV-a9d1fd9d-7074-30f5-b00c-fd649414610d.json
deleted file mode 100644
index 329996f..0000000
--- a/test/data/enm/study-FCSV-a9d1fd9d-7074-30f5-b00c-fd649414610d.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-a9d1fd9d-7074-30f5-b00c-fd649414610d",
- "owner": {
- "substance": {
- "uuid": "FCSV-ef28f16c-6ab1-3d8b-b971-37c08688701f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 222.046,
- "errQualifier": "sd",
- "errorValue": 45.351
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 2
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.02
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-a9f46914-3528-3bfc-a1c6-b3dfa9dffd5f.json b/test/data/enm/study-FCSV-a9f46914-3528-3bfc-a1c6-b3dfa9dffd5f.json
deleted file mode 100644
index 30e36c6..0000000
--- a/test/data/enm/study-FCSV-a9f46914-3528-3bfc-a1c6-b3dfa9dffd5f.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-a9f46914-3528-3bfc-a1c6-b3dfa9dffd5f",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f5cd32a-3350-300b-91d0-87000ee5d7ee"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "6-Amino-1-hexanethiol"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-aa48e72a-4943-3833-b652-a790a0e4f02f.json b/test/data/enm/study-FCSV-aa48e72a-4943-3833-b652-a790a0e4f02f.json
deleted file mode 100644
index beec953..0000000
--- a/test/data/enm/study-FCSV-aa48e72a-4943-3833-b652-a790a0e4f02f.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-aa48e72a-4943-3833-b652-a790a0e4f02f",
- "owner": {
- "substance": {
- "uuid": "FCSV-c4fe20ba-de05-36c2-9842-5433ce33bd72"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-aa59baee-5462-38a6-a1d9-177b69aaddfe.json b/test/data/enm/study-FCSV-aa59baee-5462-38a6-a1d9-177b69aaddfe.json
deleted file mode 100644
index 5187e32..0000000
--- a/test/data/enm/study-FCSV-aa59baee-5462-38a6-a1d9-177b69aaddfe.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-aa59baee-5462-38a6-a1d9-177b69aaddfe",
- "owner": {
- "substance": {
- "uuid": "FCSV-2ed7ebf8-d11d-3f39-8f05-b0132ec4d7e0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.052,
- "errQualifier": "sd",
- "errorValue": 0.028
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -4.263,
- "errQualifier": "std",
- "errorValue": 0.765
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-aa6e6486-9157-367d-8d97-2730f71df9b7.json b/test/data/enm/study-FCSV-aa6e6486-9157-367d-8d97-2730f71df9b7.json
deleted file mode 100644
index 7e2019f..0000000
--- a/test/data/enm/study-FCSV-aa6e6486-9157-367d-8d97-2730f71df9b7.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-aa6e6486-9157-367d-8d97-2730f71df9b7",
- "owner": {
- "substance": {
- "uuid": "FCSV-edc7f198-f391-328e-aa68-7d3f00b62af5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 274.936,
- "errQualifier": "sd",
- "errorValue": 38.596
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 2
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.053
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-aa729c74-fb60-3f61-a8b5-0dbd719c50e1.json b/test/data/enm/study-FCSV-aa729c74-fb60-3f61-a8b5-0dbd719c50e1.json
deleted file mode 100644
index 51f4575..0000000
--- a/test/data/enm/study-FCSV-aa729c74-fb60-3f61-a8b5-0dbd719c50e1.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-aa729c74-fb60-3f61-a8b5-0dbd719c50e1",
- "owner": {
- "substance": {
- "uuid": "FCSV-e4b9ce55-bbeb-368b-a1d4-e591b7df742e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.233,
- "errQualifier": "sd",
- "errorValue": 0.011
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.167,
- "errQualifier": "sd",
- "errorValue": 0.007
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-aab0d788-2996-39b3-8e2e-0378bcfaf320.json b/test/data/enm/study-FCSV-aab0d788-2996-39b3-8e2e-0378bcfaf320.json
deleted file mode 100644
index 93b8c8f..0000000
--- a/test/data/enm/study-FCSV-aab0d788-2996-39b3-8e2e-0378bcfaf320.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-aab0d788-2996-39b3-8e2e-0378bcfaf320",
- "owner": {
- "substance": {
- "uuid": "FCSV-4c523ea9-f3e8-32f4-9152-f73400aedb67"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-aafdefc3-26bf-3153-80f6-97cd2d42938e.json b/test/data/enm/study-FCSV-aafdefc3-26bf-3153-80f6-97cd2d42938e.json
deleted file mode 100644
index 6e548fc..0000000
--- a/test/data/enm/study-FCSV-aafdefc3-26bf-3153-80f6-97cd2d42938e.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-aafdefc3-26bf-3153-80f6-97cd2d42938e",
- "owner": {
- "substance": {
- "uuid": "FCSV-6405ef25-683e-3763-a4e3-f56eb93174e4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.113,
- "errQualifier": "sd",
- "errorValue": 0.009
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.129,
- "errQualifier": "sd",
- "errorValue": 0.006
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ab20662a-6678-3f65-bdd2-dbfa99536590.json b/test/data/enm/study-FCSV-ab20662a-6678-3f65-bdd2-dbfa99536590.json
deleted file mode 100644
index ecdbec9..0000000
--- a/test/data/enm/study-FCSV-ab20662a-6678-3f65-bdd2-dbfa99536590.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-ab20662a-6678-3f65-bdd2-dbfa99536590",
- "owner": {
- "substance": {
- "uuid": "FCSV-9df9ed76-5f94-3ecb-b661-a56e168a71bf"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.128,
- "errQualifier": "sd",
- "errorValue": 0.019
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.125,
- "errQualifier": "sd",
- "errorValue": 0.02
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ab307f0b-73df-3ce4-8ba7-92a64c53a907.json b/test/data/enm/study-FCSV-ab307f0b-73df-3ce4-8ba7-92a64c53a907.json
deleted file mode 100644
index 68c9acd..0000000
--- a/test/data/enm/study-FCSV-ab307f0b-73df-3ce4-8ba7-92a64c53a907.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-ab307f0b-73df-3ce4-8ba7-92a64c53a907",
- "owner": {
- "substance": {
- "uuid": "FCSV-2b9a077f-bef3-3ffd-a83a-77dd85db129a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 28.09,
- "errQualifier": "sd",
- "errorValue": 1.13
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 51.18,
- "errQualifier": "sd",
- "errorValue": 25.2
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 28.56,
- "errQualifier": "sd",
- "errorValue": 1.25
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 33.77,
- "errQualifier": "sd",
- "errorValue": 3.9
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31.55,
- "errQualifier": "sd",
- "errorValue": 1.66
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31.5,
- "errQualifier": "sd",
- "errorValue": 4.9
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31.55,
- "errQualifier": "sd",
- "errorValue": 0.74
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 40.08,
- "errQualifier": "sd",
- "errorValue": 2.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ab77fa85-c3f3-338e-94ae-d7eefd4faeb0.json b/test/data/enm/study-FCSV-ab77fa85-c3f3-338e-94ae-d7eefd4faeb0.json
deleted file mode 100644
index 1c36c4d..0000000
--- a/test/data/enm/study-FCSV-ab77fa85-c3f3-338e-94ae-d7eefd4faeb0.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-ab77fa85-c3f3-338e-94ae-d7eefd4faeb0",
- "owner": {
- "substance": {
- "uuid": "FCSV-2de5071e-596b-3507-84fc-f9ba470cbcbf"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Thiolated poly(L-lysine)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-abc10ee8-47a8-3ff4-ae6c-f2e59057b91c.json b/test/data/enm/study-FCSV-abc10ee8-47a8-3ff4-ae6c-f2e59057b91c.json
deleted file mode 100644
index 28dd081..0000000
--- a/test/data/enm/study-FCSV-abc10ee8-47a8-3ff4-ae6c-f2e59057b91c.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-abc10ee8-47a8-3ff4-ae6c-f2e59057b91c",
- "owner": {
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- "uuid": "FCSV-1180669a-fc30-3bc1-b53e-6a200c4248e4"
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
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- "reliability": {
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- "effects": [
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- "endpoint": "ATOMIC COMPOSITION",
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- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
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- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
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- }
- ]
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diff --git a/test/data/enm/study-FCSV-abc74a96-cca2-37c5-a408-96e10b93202f.json b/test/data/enm/study-FCSV-abc74a96-cca2-37c5-a408-96e10b93202f.json
deleted file mode 100644
index 22622f7..0000000
--- a/test/data/enm/study-FCSV-abc74a96-cca2-37c5-a408-96e10b93202f.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-abc74a96-cca2-37c5-a408-96e10b93202f",
- "owner": {
- "substance": {
- "uuid": "FCSV-6d5b38c4-f57f-31de-b8b4-2719792f82f2"
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
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- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ac398b7b-bfe6-3319-b504-012ac7fa628c.json b/test/data/enm/study-FCSV-ac398b7b-bfe6-3319-b504-012ac7fa628c.json
deleted file mode 100644
index 8173bda..0000000
--- a/test/data/enm/study-FCSV-ac398b7b-bfe6-3319-b504-012ac7fa628c.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-ac398b7b-bfe6-3319-b504-012ac7fa628c",
- "owner": {
- "substance": {
- "uuid": "FCSV-206b1a13-e02a-38a0-88ec-d5a8bfdabc55"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -3.07,
- "errQualifier": "sd",
- "errorValue": 1.08
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -5.35,
- "errQualifier": "sd",
- "errorValue": 0.79
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ac3afa8a-3eca-37e3-af26-aef0da0128eb.json b/test/data/enm/study-FCSV-ac3afa8a-3eca-37e3-af26-aef0da0128eb.json
deleted file mode 100644
index fa7cf97..0000000
--- a/test/data/enm/study-FCSV-ac3afa8a-3eca-37e3-af26-aef0da0128eb.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-ac3afa8a-3eca-37e3-af26-aef0da0128eb",
- "owner": {
- "substance": {
- "uuid": "FCSV-4026a85b-f254-3d35-bd77-c634d38e4a22"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.321,
- "errQualifier": "sd",
- "errorValue": 0.176
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.273,
- "errQualifier": "sd",
- "errorValue": 0.009
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ac501399-cde9-31ca-a953-64dfd0aa806b.json b/test/data/enm/study-FCSV-ac501399-cde9-31ca-a953-64dfd0aa806b.json
deleted file mode 100644
index 5f1562b..0000000
--- a/test/data/enm/study-FCSV-ac501399-cde9-31ca-a953-64dfd0aa806b.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-ac501399-cde9-31ca-a953-64dfd0aa806b",
- "owner": {
- "substance": {
- "uuid": "FCSV-cd7105f2-f630-360e-b8dc-ff42b18bb421"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -29.37,
- "errQualifier": "sd",
- "errorValue": 4.37
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -6.1,
- "errQualifier": "sd",
- "errorValue": 1.64
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ac8a0107-00ba-3bb3-826f-7650a69d32de.json b/test/data/enm/study-FCSV-ac8a0107-00ba-3bb3-826f-7650a69d32de.json
deleted file mode 100644
index e277f68..0000000
--- a/test/data/enm/study-FCSV-ac8a0107-00ba-3bb3-826f-7650a69d32de.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-ac8a0107-00ba-3bb3-826f-7650a69d32de",
- "owner": {
- "substance": {
- "uuid": "FCSV-ef28f16c-6ab1-3d8b-b971-37c08688701f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-aca5f78f-39ea-32cc-8777-669518f65b53.json b/test/data/enm/study-FCSV-aca5f78f-39ea-32cc-8777-669518f65b53.json
deleted file mode 100644
index 2828e40..0000000
--- a/test/data/enm/study-FCSV-aca5f78f-39ea-32cc-8777-669518f65b53.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-aca5f78f-39ea-32cc-8777-669518f65b53",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f0e4035-24d4-3a81-b20b-bd156f210616"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.084,
- "errQualifier": "sd",
- "errorValue": 0.009
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.083,
- "errQualifier": "sd",
- "errorValue": 0.011
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-acfe6a88-6bba-3636-8639-d1bbbb289fdd.json b/test/data/enm/study-FCSV-acfe6a88-6bba-3636-8639-d1bbbb289fdd.json
deleted file mode 100644
index 0567e93..0000000
--- a/test/data/enm/study-FCSV-acfe6a88-6bba-3636-8639-d1bbbb289fdd.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-acfe6a88-6bba-3636-8639-d1bbbb289fdd",
- "owner": {
- "substance": {
- "uuid": "FCSV-7087aac7-6f1d-320f-bfde-5897fe91af64"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 4.523,
- "errQualifier": "sd",
- "errorValue": 0.619
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ad5e2f76-4589-3507-a075-85e128069008.json b/test/data/enm/study-FCSV-ad5e2f76-4589-3507-a075-85e128069008.json
deleted file mode 100644
index be772b6..0000000
--- a/test/data/enm/study-FCSV-ad5e2f76-4589-3507-a075-85e128069008.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-ad5e2f76-4589-3507-a075-85e128069008",
- "owner": {
- "substance": {
- "uuid": "FCSV-06c1d24b-426b-39ec-8047-700808302325"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 460.851,
- "errQualifier": "sd",
- "errorValue": 23.324
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.06
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ad924b58-77ed-3680-be4b-bbb5d740cfd5.json b/test/data/enm/study-FCSV-ad924b58-77ed-3680-be4b-bbb5d740cfd5.json
deleted file mode 100644
index fac5974..0000000
--- a/test/data/enm/study-FCSV-ad924b58-77ed-3680-be4b-bbb5d740cfd5.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-ad924b58-77ed-3680-be4b-bbb5d740cfd5",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f5e6fcb-23b9-3222-aa6e-4afcbba47715"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 3.07,
- "errQualifier": "sd",
- "errorValue": 0.74
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ad9e0fc1-61c5-3a32-b924-f272f9a0db83.json b/test/data/enm/study-FCSV-ad9e0fc1-61c5-3a32-b924-f272f9a0db83.json
deleted file mode 100644
index fd3b52b..0000000
--- a/test/data/enm/study-FCSV-ad9e0fc1-61c5-3a32-b924-f272f9a0db83.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-ad9e0fc1-61c5-3a32-b924-f272f9a0db83",
- "owner": {
- "substance": {
- "uuid": "FCSV-ff7e8515-cfad-3d76-a918-d6eeab10a91d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-add752a5-b79b-3f78-9b34-ff0bd004ef32.json b/test/data/enm/study-FCSV-add752a5-b79b-3f78-9b34-ff0bd004ef32.json
deleted file mode 100644
index 84193e4..0000000
--- a/test/data/enm/study-FCSV-add752a5-b79b-3f78-9b34-ff0bd004ef32.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-add752a5-b79b-3f78-9b34-ff0bd004ef32",
- "owner": {
- "substance": {
- "uuid": "FCSV-47e98c51-7508-362f-84d3-494bb124b849"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.256,
- "errQualifier": "sd",
- "errorValue": 0.075
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.424,
- "errQualifier": "sd",
- "errorValue": 0.024
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 518.03,
- "errQualifier": "sd",
- "errorValue": 0.87
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-adf77f30-ee23-39c9-a5b8-aa48762ba537.json b/test/data/enm/study-FCSV-adf77f30-ee23-39c9-a5b8-aa48762ba537.json
deleted file mode 100644
index 43b7768..0000000
--- a/test/data/enm/study-FCSV-adf77f30-ee23-39c9-a5b8-aa48762ba537.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-adf77f30-ee23-39c9-a5b8-aa48762ba537",
- "owner": {
- "substance": {
- "uuid": "FCSV-1c9a58a0-cd91-3636-8f7c-4fd886f8593a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Peptide sequence 'CALNN'"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ae224991-49f6-35d0-b874-d485fed70bf8.json b/test/data/enm/study-FCSV-ae224991-49f6-35d0-b874-d485fed70bf8.json
deleted file mode 100644
index b6a3985..0000000
--- a/test/data/enm/study-FCSV-ae224991-49f6-35d0-b874-d485fed70bf8.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-ae224991-49f6-35d0-b874-d485fed70bf8",
- "owner": {
- "substance": {
- "uuid": "FCSV-ffe19c9e-b1a1-3f38-a149-0d587fc5b172"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ae3bb801-ed8c-386c-97bb-002708caded5.json b/test/data/enm/study-FCSV-ae3bb801-ed8c-386c-97bb-002708caded5.json
deleted file mode 100644
index 7f27281..0000000
--- a/test/data/enm/study-FCSV-ae3bb801-ed8c-386c-97bb-002708caded5.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-ae3bb801-ed8c-386c-97bb-002708caded5",
- "owner": {
- "substance": {
- "uuid": "FCSV-1842b3a2-413c-327c-a07a-9905269bafb5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ae8dd949-973b-399e-9e34-372bccff6fec.json b/test/data/enm/study-FCSV-ae8dd949-973b-399e-9e34-372bccff6fec.json
deleted file mode 100644
index 71c4655..0000000
--- a/test/data/enm/study-FCSV-ae8dd949-973b-399e-9e34-372bccff6fec.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-ae8dd949-973b-399e-9e34-372bccff6fec",
- "owner": {
- "substance": {
- "uuid": "FCSV-edc7f198-f391-328e-aa68-7d3f00b62af5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-aef9fcc3-43d5-3b20-8894-96ac92ccada7.json b/test/data/enm/study-FCSV-aef9fcc3-43d5-3b20-8894-96ac92ccada7.json
deleted file mode 100644
index 6c1245d..0000000
--- a/test/data/enm/study-FCSV-aef9fcc3-43d5-3b20-8894-96ac92ccada7.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-aef9fcc3-43d5-3b20-8894-96ac92ccada7",
- "owner": {
- "substance": {
- "uuid": "FCSV-206b1a13-e02a-38a0-88ec-d5a8bfdabc55"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.188,
- "errQualifier": "sd",
- "errorValue": 0.053
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.299,
- "errQualifier": "sd",
- "errorValue": 0.067
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-af1b9c25-dcf3-36de-ba20-06627f218d84.json b/test/data/enm/study-FCSV-af1b9c25-dcf3-36de-ba20-06627f218d84.json
deleted file mode 100644
index 0db65fa..0000000
--- a/test/data/enm/study-FCSV-af1b9c25-dcf3-36de-ba20-06627f218d84.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-af1b9c25-dcf3-36de-ba20-06627f218d84",
- "owner": {
- "substance": {
- "uuid": "FCSV-a3c8dce5-07ab-3ca6-91a0-84072fc24aed"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 4.049,
- "errQualifier": "sd",
- "errorValue": 0.229
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-af200471-3083-3ad7-8454-65c0bf67b288.json b/test/data/enm/study-FCSV-af200471-3083-3ad7-8454-65c0bf67b288.json
deleted file mode 100644
index 82ef24c..0000000
--- a/test/data/enm/study-FCSV-af200471-3083-3ad7-8454-65c0bf67b288.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-af200471-3083-3ad7-8454-65c0bf67b288",
- "owner": {
- "substance": {
- "uuid": "FCSV-d63a1ea0-3194-3019-a9e0-0960e63b5819"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-af6e6d70-3193-3a44-90ba-aa3597d7d108.json b/test/data/enm/study-FCSV-af6e6d70-3193-3a44-90ba-aa3597d7d108.json
deleted file mode 100644
index fc4eeb6..0000000
--- a/test/data/enm/study-FCSV-af6e6d70-3193-3a44-90ba-aa3597d7d108.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-af6e6d70-3193-3a44-90ba-aa3597d7d108",
- "owner": {
- "substance": {
- "uuid": "FCSV-7c42c2b4-dcbe-39a4-ae4e-0f0c41a7a5a5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 250.959,
- "errQualifier": "sd",
- "errorValue": 13.232
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.073
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b00fbaf0-34bd-3b31-a619-aed633393790.json b/test/data/enm/study-FCSV-b00fbaf0-34bd-3b31-a619-aed633393790.json
deleted file mode 100644
index 13f4bee..0000000
--- a/test/data/enm/study-FCSV-b00fbaf0-34bd-3b31-a619-aed633393790.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-b00fbaf0-34bd-3b31-a619-aed633393790",
- "owner": {
- "substance": {
- "uuid": "FCSV-a7f3867d-85fc-33ab-8167-66b73c818f31"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
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- "r_studyResultType": "experimental result",
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- },
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- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 447.135,
- "errQualifier": "sd",
- "errorValue": 3.927
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.021
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b059c1b2-84de-346d-b624-a19fe8f101f4.json b/test/data/enm/study-FCSV-b059c1b2-84de-346d-b624-a19fe8f101f4.json
deleted file mode 100644
index db07175..0000000
--- a/test/data/enm/study-FCSV-b059c1b2-84de-346d-b624-a19fe8f101f4.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-b059c1b2-84de-346d-b624-a19fe8f101f4",
- "owner": {
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- "uuid": "FCSV-70406142-0fd6-30bd-873b-5cce39016ed5"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
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- "r_studyResultType": "experimental result",
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- },
- "effects": [
- {
- "endpoint": "Spectral counts",
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- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b0afd1e5-85f9-394f-8016-53bbdd53fa49.json b/test/data/enm/study-FCSV-b0afd1e5-85f9-394f-8016-53bbdd53fa49.json
deleted file mode 100644
index 5b593b0..0000000
--- a/test/data/enm/study-FCSV-b0afd1e5-85f9-394f-8016-53bbdd53fa49.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-b0afd1e5-85f9-394f-8016-53bbdd53fa49",
- "owner": {
- "substance": {
- "uuid": "FCSV-4dd1bf89-e885-3128-abe2-9a87fbbd0242"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.053,
- "errQualifier": "sd",
- "errorValue": 0.04
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
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diff --git a/test/data/enm/study-FCSV-b0b70427-aa36-37e5-abb1-7a66f034a3e0.json b/test/data/enm/study-FCSV-b0b70427-aa36-37e5-abb1-7a66f034a3e0.json
deleted file mode 100644
index cc95134..0000000
--- a/test/data/enm/study-FCSV-b0b70427-aa36-37e5-abb1-7a66f034a3e0.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-b0b70427-aa36-37e5-abb1-7a66f034a3e0",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- "year": "2014",
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- },
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- "category": {
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diff --git a/test/data/enm/study-FCSV-b0e05090-e05d-339c-a288-b5d8f16c727d.json b/test/data/enm/study-FCSV-b0e05090-e05d-339c-a288-b5d8f16c727d.json
deleted file mode 100644
index f1571c7..0000000
--- a/test/data/enm/study-FCSV-b0e05090-e05d-339c-a288-b5d8f16c727d.json
+++ /dev/null
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-{
- "uuid": "FCSV-b0e05090-e05d-339c-a288-b5d8f16c727d",
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diff --git a/test/data/enm/study-FCSV-b11368d1-c347-329d-8bf6-70377759f84d.json b/test/data/enm/study-FCSV-b11368d1-c347-329d-8bf6-70377759f84d.json
deleted file mode 100644
index 3f58498..0000000
--- a/test/data/enm/study-FCSV-b11368d1-c347-329d-8bf6-70377759f84d.json
+++ /dev/null
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-{
- "uuid": "FCSV-b11368d1-c347-329d-8bf6-70377759f84d",
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- "year": "2014",
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- "category": {
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diff --git a/test/data/enm/study-FCSV-b11380bd-265e-3e9e-a23d-3589dddec7da.json b/test/data/enm/study-FCSV-b11380bd-265e-3e9e-a23d-3589dddec7da.json
deleted file mode 100644
index 8179943..0000000
--- a/test/data/enm/study-FCSV-b11380bd-265e-3e9e-a23d-3589dddec7da.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
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- "endpoint": "Bicinchoninic Acid (BCA) Assay",
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diff --git a/test/data/enm/study-FCSV-b1205cbd-e174-302b-9cb4-36c1d8ac75ec.json b/test/data/enm/study-FCSV-b1205cbd-e174-302b-9cb4-36c1d8ac75ec.json
deleted file mode 100644
index 19cf2e5..0000000
--- a/test/data/enm/study-FCSV-b1205cbd-e174-302b-9cb4-36c1d8ac75ec.json
+++ /dev/null
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-{
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- "category": {
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diff --git a/test/data/enm/study-FCSV-b14b3c67-1eda-330b-bf9f-20c5e720acb0.json b/test/data/enm/study-FCSV-b14b3c67-1eda-330b-bf9f-20c5e720acb0.json
deleted file mode 100644
index 581dde7..0000000
--- a/test/data/enm/study-FCSV-b14b3c67-1eda-330b-bf9f-20c5e720acb0.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/study-FCSV-b15b4370-a854-3565-a84d-53b17c5e513c.json b/test/data/enm/study-FCSV-b15b4370-a854-3565-a84d-53b17c5e513c.json
deleted file mode 100644
index 113e1c5..0000000
--- a/test/data/enm/study-FCSV-b15b4370-a854-3565-a84d-53b17c5e513c.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
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- "title": "4.29 Nanomaterial zeta potential"
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diff --git a/test/data/enm/study-FCSV-b1a38c8d-0410-3983-8446-913659ada18a.json b/test/data/enm/study-FCSV-b1a38c8d-0410-3983-8446-913659ada18a.json
deleted file mode 100644
index d2efd6e..0000000
--- a/test/data/enm/study-FCSV-b1a38c8d-0410-3983-8446-913659ada18a.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-b1a38c8d-0410-3983-8446-913659ada18a",
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- "year": "2014",
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- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
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diff --git a/test/data/enm/study-FCSV-b21399f1-4b1d-398d-8312-0c76da24b328.json b/test/data/enm/study-FCSV-b21399f1-4b1d-398d-8312-0c76da24b328.json
deleted file mode 100644
index 60e29a0..0000000
--- a/test/data/enm/study-FCSV-b21399f1-4b1d-398d-8312-0c76da24b328.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
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- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 462.138,
- "errQualifier": "sd",
- "errorValue": 6.828
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.015
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b23c13e0-7af7-32a9-aa14-c2780c8a1d21.json b/test/data/enm/study-FCSV-b23c13e0-7af7-32a9-aa14-c2780c8a1d21.json
deleted file mode 100644
index 1b87f0c..0000000
--- a/test/data/enm/study-FCSV-b23c13e0-7af7-32a9-aa14-c2780c8a1d21.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-b23c13e0-7af7-32a9-aa14-c2780c8a1d21",
- "owner": {
- "substance": {
- "uuid": "FCSV-d6c56b3e-71a2-330b-92b6-9c90e6046eaa"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Thiolated L-threonine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b26c5d41-1ba0-3e03-873e-7c634e382973.json b/test/data/enm/study-FCSV-b26c5d41-1ba0-3e03-873e-7c634e382973.json
deleted file mode 100644
index ca54438..0000000
--- a/test/data/enm/study-FCSV-b26c5d41-1ba0-3e03-873e-7c634e382973.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-b26c5d41-1ba0-3e03-873e-7c634e382973",
- "owner": {
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- "uuid": "FCSV-de7a4a31-ee94-313e-bfc4-acc11f0b56ec"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.102,
- "errQualifier": "sd",
- "errorValue": 0.009
- }
- },
- {
- "endpoint": "Log2 transformed",
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- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -3.291,
- "errQualifier": "std",
- "errorValue": 0.13
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b26eb174-9fba-360e-846a-9f06dd656982.json b/test/data/enm/study-FCSV-b26eb174-9fba-360e-846a-9f06dd656982.json
deleted file mode 100644
index 0c07ea5..0000000
--- a/test/data/enm/study-FCSV-b26eb174-9fba-360e-846a-9f06dd656982.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-b26eb174-9fba-360e-846a-9f06dd656982",
- "owner": {
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- "uuid": "FCSV-924a51b9-97d3-31fb-b289-52688d9d0d3c"
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
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- },
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- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
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- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -22.2,
- "errQualifier": "sd",
- "errorValue": 4.69
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
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- "MEDIUM": "Human serum (Sigma #H4522)",
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- "pH": null
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- "result": {
- "unit": "mV",
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- }
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diff --git a/test/data/enm/study-FCSV-b28a6e14-bca0-320a-b228-cf2ba3b25061.json b/test/data/enm/study-FCSV-b28a6e14-bca0-320a-b228-cf2ba3b25061.json
deleted file mode 100644
index 331ae7f..0000000
--- a/test/data/enm/study-FCSV-b28a6e14-bca0-320a-b228-cf2ba3b25061.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-b28a6e14-bca0-320a-b228-cf2ba3b25061",
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- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
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- },
- "reliability": {
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- },
- "effects": [
- {
- "endpoint": "Spectral counts",
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- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b2ac8863-ce4e-325c-85ea-d53529010256.json b/test/data/enm/study-FCSV-b2ac8863-ce4e-325c-85ea-d53529010256.json
deleted file mode 100644
index e90b86e..0000000
--- a/test/data/enm/study-FCSV-b2ac8863-ce4e-325c-85ea-d53529010256.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-b2ac8863-ce4e-325c-85ea-d53529010256",
- "owner": {
- "substance": {
- "uuid": "FCSV-9bf04ec0-f6b6-30a6-8970-19a51968532e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -36.08,
- "errQualifier": "sd",
- "errorValue": 4.92
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -11.58,
- "errQualifier": "sd",
- "errorValue": 2.66
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b34adcc6-64c8-31a3-adb5-c7bad51a0f11.json b/test/data/enm/study-FCSV-b34adcc6-64c8-31a3-adb5-c7bad51a0f11.json
deleted file mode 100644
index 2ddc36c..0000000
--- a/test/data/enm/study-FCSV-b34adcc6-64c8-31a3-adb5-c7bad51a0f11.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-b34adcc6-64c8-31a3-adb5-c7bad51a0f11",
- "owner": {
- "substance": {
- "uuid": "FCSV-130b04ab-86e6-38d6-9276-e2db1b4dcffb"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 38.77,
- "errQualifier": "sd",
- "errorValue": 0.29
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 61.91,
- "errQualifier": "sd",
- "errorValue": 1.61
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 36.59,
- "errQualifier": "sd",
- "errorValue": 9.64
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 24.51,
- "errQualifier": "sd",
- "errorValue": 5.55
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 45.01,
- "errQualifier": "sd",
- "errorValue": 10.98
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 19.74,
- "errQualifier": "sd",
- "errorValue": 3.98
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 45.01,
- "errQualifier": "sd",
- "errorValue": 1.82
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 72.2,
- "errQualifier": "sd",
- "errorValue": 1.77
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b3782a0c-efb1-3fc8-a2ca-3b8e302f1498.json b/test/data/enm/study-FCSV-b3782a0c-efb1-3fc8-a2ca-3b8e302f1498.json
deleted file mode 100644
index 4ee18ed..0000000
--- a/test/data/enm/study-FCSV-b3782a0c-efb1-3fc8-a2ca-3b8e302f1498.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-b3782a0c-efb1-3fc8-a2ca-3b8e302f1498",
- "owner": {
- "substance": {
- "uuid": "FCSV-4c523ea9-f3e8-32f4-9152-f73400aedb67"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
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- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
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- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.201,
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- {
- "endpoint": "Polydispersity index",
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- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 0.214,
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diff --git a/test/data/enm/study-FCSV-b3a1d0d3-b215-30f4-abc9-4447faac08f9.json b/test/data/enm/study-FCSV-b3a1d0d3-b215-30f4-abc9-4447faac08f9.json
deleted file mode 100644
index e2b08f7..0000000
--- a/test/data/enm/study-FCSV-b3a1d0d3-b215-30f4-abc9-4447faac08f9.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-b3a1d0d3-b215-30f4-abc9-4447faac08f9",
- "owner": {
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- "uuid": "FCSV-8dc5c24b-2e89-3833-b94d-920674a956a0"
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
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- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
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- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
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- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.236,
- "errQualifier": "sd",
- "errorValue": 0.071
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
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- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
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- "loQualifier": "mean",
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- "errQualifier": "sd",
- "errorValue": 0.006
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
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- "MEDIUM": " "
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- "result": {
- "unit": "nm",
- "loQualifier": "mean",
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- }
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diff --git a/test/data/enm/study-FCSV-b3bf9410-d0c1-364b-a77e-502b9f2f593a.json b/test/data/enm/study-FCSV-b3bf9410-d0c1-364b-a77e-502b9f2f593a.json
deleted file mode 100644
index 474b81e..0000000
--- a/test/data/enm/study-FCSV-b3bf9410-d0c1-364b-a77e-502b9f2f593a.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-b3bf9410-d0c1-364b-a77e-502b9f2f593a",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc488cf3-986d-34cf-9ee7-12f98873dfe4"
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
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- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b3e9b8ae-0930-3d79-8981-7a506fda1b2d.json b/test/data/enm/study-FCSV-b3e9b8ae-0930-3d79-8981-7a506fda1b2d.json
deleted file mode 100644
index 537481f..0000000
--- a/test/data/enm/study-FCSV-b3e9b8ae-0930-3d79-8981-7a506fda1b2d.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-b3e9b8ae-0930-3d79-8981-7a506fda1b2d",
- "owner": {
- "substance": {
- "uuid": "FCSV-3b96ad7a-bf2d-360d-881a-26094f498af6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b41b3b01-af83-3ab4-b2a3-4e9382d471ee.json b/test/data/enm/study-FCSV-b41b3b01-af83-3ab4-b2a3-4e9382d471ee.json
deleted file mode 100644
index b017bb1..0000000
--- a/test/data/enm/study-FCSV-b41b3b01-af83-3ab4-b2a3-4e9382d471ee.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-b41b3b01-af83-3ab4-b2a3-4e9382d471ee",
- "owner": {
- "substance": {
- "uuid": "FCSV-7087aac7-6f1d-320f-bfde-5897fe91af64"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "FUNCTIONAL GROUP",
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- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "16-Mercaptohexadecanoic acid"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b42a0404-db17-366c-bbff-e33ebe52af85.json b/test/data/enm/study-FCSV-b42a0404-db17-366c-bbff-e33ebe52af85.json
deleted file mode 100644
index 8fb517c..0000000
--- a/test/data/enm/study-FCSV-b42a0404-db17-366c-bbff-e33ebe52af85.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-b42a0404-db17-366c-bbff-e33ebe52af85",
- "owner": {
- "substance": {
- "uuid": "FCSV-05f4c488-5326-3d8a-be41-c57c468b2fa4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
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- },
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- "effects": [
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- "endpoint": "Core size",
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 59.3,
- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Density",
- "conditions": {
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- },
- "result": {
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- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
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- "Remark": null,
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- "result": {
- "unit": "g/mol",
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- "loValue": 197
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- {
- "endpoint": "Mol/NP",
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- "Remark": null,
- "SEQ_NUM": null
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- {
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
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diff --git a/test/data/enm/study-FCSV-b42b9514-9693-3b87-b40e-6920a55ffb8e.json b/test/data/enm/study-FCSV-b42b9514-9693-3b87-b40e-6920a55ffb8e.json
deleted file mode 100644
index c537c49..0000000
--- a/test/data/enm/study-FCSV-b42b9514-9693-3b87-b40e-6920a55ffb8e.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-b42b9514-9693-3b87-b40e-6920a55ffb8e",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -21.78,
- "errQualifier": "sd",
- "errorValue": 6.81
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -9.11,
- "errQualifier": "sd",
- "errorValue": 1.11
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b431d8f6-660b-35bd-aafe-ee1cdcb1d2ec.json b/test/data/enm/study-FCSV-b431d8f6-660b-35bd-aafe-ee1cdcb1d2ec.json
deleted file mode 100644
index f35e71a..0000000
--- a/test/data/enm/study-FCSV-b431d8f6-660b-35bd-aafe-ee1cdcb1d2ec.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-b431d8f6-660b-35bd-aafe-ee1cdcb1d2ec",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- "parameters": {
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- "Type of method": "DLS",
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- "effects": [
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- "endpoint": "Polydispersity index",
- "conditions": {
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- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.115,
- "errQualifier": "sd",
- "errorValue": 0.013
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 0.093,
- "errQualifier": "sd",
- "errorValue": 0.026
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- ]
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diff --git a/test/data/enm/study-FCSV-b43890ff-2d4b-3829-af43-c13222108b22.json b/test/data/enm/study-FCSV-b43890ff-2d4b-3829-af43-c13222108b22.json
deleted file mode 100644
index 3410129..0000000
--- a/test/data/enm/study-FCSV-b43890ff-2d4b-3829-af43-c13222108b22.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-b43890ff-2d4b-3829-af43-c13222108b22",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
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- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
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- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- },
- "parameters": {
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- "testmat_form": null
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- "reliability": {
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- "effects": [
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- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 0.372,
- "errQualifier": "sd",
- "errorValue": 0.238
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diff --git a/test/data/enm/study-FCSV-b4898c62-ec8c-35dc-9ae5-16151428b75b.json b/test/data/enm/study-FCSV-b4898c62-ec8c-35dc-9ae5-16151428b75b.json
deleted file mode 100644
index bc8b646..0000000
--- a/test/data/enm/study-FCSV-b4898c62-ec8c-35dc-9ae5-16151428b75b.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-b4898c62-ec8c-35dc-9ae5-16151428b75b",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
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- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "effects": [
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- "TYPE": {
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- "loValue": "CORE"
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- "result": {
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- "textValue": "[Au]"
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diff --git a/test/data/enm/study-FCSV-b4ac4c18-224e-385d-b332-fd0235f25d40.json b/test/data/enm/study-FCSV-b4ac4c18-224e-385d-b332-fd0235f25d40.json
deleted file mode 100644
index ec0dbe0..0000000
--- a/test/data/enm/study-FCSV-b4ac4c18-224e-385d-b332-fd0235f25d40.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-b4ac4c18-224e-385d-b332-fd0235f25d40",
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- },
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- "year": "2014",
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- },
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- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
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- "result": {
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- "textValue": "[Au]"
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diff --git a/test/data/enm/study-FCSV-b4da9958-a1b9-3bc1-bdac-5ecd8cae5fae.json b/test/data/enm/study-FCSV-b4da9958-a1b9-3bc1-bdac-5ecd8cae5fae.json
deleted file mode 100644
index 63b75be..0000000
--- a/test/data/enm/study-FCSV-b4da9958-a1b9-3bc1-bdac-5ecd8cae5fae.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-b4da9958-a1b9-3bc1-bdac-5ecd8cae5fae",
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- "year": "2014",
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- },
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- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
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- "endpoint": "Bicinchoninic Acid (BCA) Assay",
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diff --git a/test/data/enm/study-FCSV-b4e069ae-eb33-3da9-b01b-b20accf1cae3.json b/test/data/enm/study-FCSV-b4e069ae-eb33-3da9-b01b-b20accf1cae3.json
deleted file mode 100644
index 2b2b7aa..0000000
--- a/test/data/enm/study-FCSV-b4e069ae-eb33-3da9-b01b-b20accf1cae3.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-b4e069ae-eb33-3da9-b01b-b20accf1cae3",
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- "title": "4.26 Nanomaterial crystallite and grain size"
- },
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- "loValue": 0.087,
- "errQualifier": "sd",
- "errorValue": 0.025
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b5183d27-2e45-37c9-984a-f7f9347979e8.json b/test/data/enm/study-FCSV-b5183d27-2e45-37c9-984a-f7f9347979e8.json
deleted file mode 100644
index 6ed48ba..0000000
--- a/test/data/enm/study-FCSV-b5183d27-2e45-37c9-984a-f7f9347979e8.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-b5183d27-2e45-37c9-984a-f7f9347979e8",
- "owner": {
- "substance": {
- "uuid": "FCSV-8e1a76df-a12d-3254-ae6b-28e20153ef59"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 743.369,
- "errQualifier": "sd",
- "errorValue": 125.858
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 8,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.026
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b52283ea-c3af-3428-9fb3-6c277d796ee4.json b/test/data/enm/study-FCSV-b52283ea-c3af-3428-9fb3-6c277d796ee4.json
deleted file mode 100644
index 3c05f72..0000000
--- a/test/data/enm/study-FCSV-b52283ea-c3af-3428-9fb3-6c277d796ee4.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-b52283ea-c3af-3428-9fb3-6c277d796ee4",
- "owner": {
- "substance": {
- "uuid": "FCSV-8a45dec8-a551-33cc-a7ac-7750d9f30389"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 2.389,
- "errQualifier": "sd",
- "errorValue": 0.655
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b55edfef-60af-3fb3-bd03-babc2b7c5917.json b/test/data/enm/study-FCSV-b55edfef-60af-3fb3-bd03-babc2b7c5917.json
deleted file mode 100644
index 243d2ff..0000000
--- a/test/data/enm/study-FCSV-b55edfef-60af-3fb3-bd03-babc2b7c5917.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-b55edfef-60af-3fb3-bd03-babc2b7c5917",
- "owner": {
- "substance": {
- "uuid": "FCSV-07629748-9b8e-381b-a4e6-79b495404e02"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b55f70a2-7dc5-3a10-878f-58333168fb65.json b/test/data/enm/study-FCSV-b55f70a2-7dc5-3a10-878f-58333168fb65.json
deleted file mode 100644
index 102ea8e..0000000
--- a/test/data/enm/study-FCSV-b55f70a2-7dc5-3a10-878f-58333168fb65.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-b55f70a2-7dc5-3a10-878f-58333168fb65",
- "owner": {
- "substance": {
- "uuid": "FCSV-a4df7f03-50e1-387c-b0b7-2ce62ed03a8c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -30.57,
- "errQualifier": "sd",
- "errorValue": 5.04
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -10.6,
- "errQualifier": "sd",
- "errorValue": 1.88
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b5e692d7-4feb-39fb-9293-907e970372c1.json b/test/data/enm/study-FCSV-b5e692d7-4feb-39fb-9293-907e970372c1.json
deleted file mode 100644
index f34ef2c..0000000
--- a/test/data/enm/study-FCSV-b5e692d7-4feb-39fb-9293-907e970372c1.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-b5e692d7-4feb-39fb-9293-907e970372c1",
- "owner": {
- "substance": {
- "uuid": "FCSV-064f1803-3b9e-3f44-a5f6-60b1f573830c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 34.16,
- "errQualifier": "sd",
- "errorValue": 0.33
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
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- "errorValue": 0.9
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
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- },
- "result": {
- "unit": "nm",
- "loValue": 34.69,
- "errQualifier": "sd",
- "errorValue": 0.64
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 34.82,
- "errQualifier": "sd",
- "errorValue": 0.93
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 36.95,
- "errQualifier": "sd",
- "errorValue": 0.85
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 32.84,
- "errQualifier": "sd",
- "errorValue": 0.46
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 36.95,
- "errQualifier": "sd",
- "errorValue": 0.35
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 38.28,
- "errQualifier": "sd",
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- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-b6184b85-cd3c-33b7-80f2-f2e0d5c8fdbe.json b/test/data/enm/study-FCSV-b6184b85-cd3c-33b7-80f2-f2e0d5c8fdbe.json
deleted file mode 100644
index 9f48231..0000000
--- a/test/data/enm/study-FCSV-b6184b85-cd3c-33b7-80f2-f2e0d5c8fdbe.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-b6184b85-cd3c-33b7-80f2-f2e0d5c8fdbe",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
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- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
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- "result": {
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- "loQualifier": "mean",
- "loValue": -9.35,
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- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -5.04,
- "errQualifier": "sd",
- "errorValue": 4.42
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-b63a3c77-2f63-3667-8c53-43e25ba6c569.json b/test/data/enm/study-FCSV-b63a3c77-2f63-3667-8c53-43e25ba6c569.json
deleted file mode 100644
index 200fa12..0000000
--- a/test/data/enm/study-FCSV-b63a3c77-2f63-3667-8c53-43e25ba6c569.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-b63a3c77-2f63-3667-8c53-43e25ba6c569",
- "owner": {
- "substance": {
- "uuid": "FCSV-8619e6db-2c01-389e-b05b-e75273d18359"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
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- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
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- "r_studyResultType": "experimental result",
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- },
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- "effects": [
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- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
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- }
- ]
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diff --git a/test/data/enm/study-FCSV-b7044b47-e2b6-3404-bc23-099c9fc31031.json b/test/data/enm/study-FCSV-b7044b47-e2b6-3404-bc23-099c9fc31031.json
deleted file mode 100644
index a32b8c5..0000000
--- a/test/data/enm/study-FCSV-b7044b47-e2b6-3404-bc23-099c9fc31031.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-b7044b47-e2b6-3404-bc23-099c9fc31031",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
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- "effects": [
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- "pH": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": -27.52,
- "errQualifier": "sd",
- "errorValue": 3.9
- }
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- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -10.96,
- "errQualifier": "sd",
- "errorValue": 4.01
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-b713f1f2-6c54-34aa-bcbc-47aa676fba07.json b/test/data/enm/study-FCSV-b713f1f2-6c54-34aa-bcbc-47aa676fba07.json
deleted file mode 100644
index 969007f..0000000
--- a/test/data/enm/study-FCSV-b713f1f2-6c54-34aa-bcbc-47aa676fba07.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-b713f1f2-6c54-34aa-bcbc-47aa676fba07",
- "owner": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 1.18,
- "errQualifier": "sd",
- "errorValue": 0.24
- }
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diff --git a/test/data/enm/study-FCSV-b77da7ac-1e06-392f-9c4f-1f8a145e4a2f.json b/test/data/enm/study-FCSV-b77da7ac-1e06-392f-9c4f-1f8a145e4a2f.json
deleted file mode 100644
index 1a91da3..0000000
--- a/test/data/enm/study-FCSV-b77da7ac-1e06-392f-9c4f-1f8a145e4a2f.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-b77da7ac-1e06-392f-9c4f-1f8a145e4a2f",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Core size",
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Density",
- "conditions": {
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "",
- "loValue": 0.0
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- {
- "endpoint": "SA/NP",
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
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diff --git a/test/data/enm/study-FCSV-b7a71128-a7b0-3ee2-b7d9-ee26d4b08c0a.json b/test/data/enm/study-FCSV-b7a71128-a7b0-3ee2-b7d9-ee26d4b08c0a.json
deleted file mode 100644
index d45afd8..0000000
--- a/test/data/enm/study-FCSV-b7a71128-a7b0-3ee2-b7d9-ee26d4b08c0a.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-b7a71128-a7b0-3ee2-b7d9-ee26d4b08c0a",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
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- },
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- "effects": [
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- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
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- {
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- "loQualifier": "",
- "loValue": 19.1
- }
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- {
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- "result": {
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- {
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- "result": {
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- ]
-}
diff --git a/test/data/enm/study-FCSV-b8187d95-4992-3ef0-a3b3-e058e34332be.json b/test/data/enm/study-FCSV-b8187d95-4992-3ef0-a3b3-e058e34332be.json
deleted file mode 100644
index 91a0cde..0000000
--- a/test/data/enm/study-FCSV-b8187d95-4992-3ef0-a3b3-e058e34332be.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-b8187d95-4992-3ef0-a3b3-e058e34332be",
- "owner": {
- "substance": {
- "uuid": "FCSV-c975883b-640e-38a6-aabe-7596e3abcd95"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.301,
- "errQualifier": "sd",
- "errorValue": 0.141
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.184,
- "errQualifier": "sd",
- "errorValue": 0.022
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b823a135-1a2e-3009-a40c-b8710fa1204b.json b/test/data/enm/study-FCSV-b823a135-1a2e-3009-a40c-b8710fa1204b.json
deleted file mode 100644
index ebfb80c..0000000
--- a/test/data/enm/study-FCSV-b823a135-1a2e-3009-a40c-b8710fa1204b.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-b823a135-1a2e-3009-a40c-b8710fa1204b",
- "owner": {
- "substance": {
- "uuid": "FCSV-d677545a-5079-3793-8990-4061a6b254c5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.142,
- "errQualifier": "sd",
- "errorValue": 0.125
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b84e82b8-3116-3508-9e62-90171b5aadab.json b/test/data/enm/study-FCSV-b84e82b8-3116-3508-9e62-90171b5aadab.json
deleted file mode 100644
index 18a2908..0000000
--- a/test/data/enm/study-FCSV-b84e82b8-3116-3508-9e62-90171b5aadab.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-b84e82b8-3116-3508-9e62-90171b5aadab",
- "owner": {
- "substance": {
- "uuid": "FCSV-c4e9df58-f3fb-34f6-9c56-0626c12fb1b7"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 39.44,
- "errQualifier": "sd",
- "errorValue": 1.04
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 55.07,
- "errQualifier": "sd",
- "errorValue": 6.42
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 35.03,
- "errQualifier": "sd",
- "errorValue": 4.58
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 19.34,
- "errQualifier": "sd",
- "errorValue": 1.62
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 44.08,
- "errQualifier": "sd",
- "errorValue": 4.51
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 16.36,
- "errQualifier": "sd",
- "errorValue": 1.15
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 44.08,
- "errQualifier": "sd",
- "errorValue": 1.84
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 68,
- "errQualifier": "sd",
- "errorValue": 6.23
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b89d5374-27cc-32f1-bd41-ea6a74f89357.json b/test/data/enm/study-FCSV-b89d5374-27cc-32f1-bd41-ea6a74f89357.json
deleted file mode 100644
index 2b5d9d8..0000000
--- a/test/data/enm/study-FCSV-b89d5374-27cc-32f1-bd41-ea6a74f89357.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-b89d5374-27cc-32f1-bd41-ea6a74f89357",
- "owner": {
- "substance": {
- "uuid": "FCSV-bfa499a9-7d1a-34da-bccf-4fc30c65f03d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 6.209,
- "errQualifier": "sd",
- "errorValue": 3.044
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b8e8601b-61cb-38b6-87c3-0f8b257c4b01.json b/test/data/enm/study-FCSV-b8e8601b-61cb-38b6-87c3-0f8b257c4b01.json
deleted file mode 100644
index d931e60..0000000
--- a/test/data/enm/study-FCSV-b8e8601b-61cb-38b6-87c3-0f8b257c4b01.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-b8e8601b-61cb-38b6-87c3-0f8b257c4b01",
- "owner": {
- "substance": {
- "uuid": "FCSV-bdd4c371-ffec-34f1-ae5b-2c60d243e867"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.355,
- "errQualifier": "sd",
- "errorValue": 0.335
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b914df95-e3c8-3bcc-aee1-f8b55f200f7d.json b/test/data/enm/study-FCSV-b914df95-e3c8-3bcc-aee1-f8b55f200f7d.json
deleted file mode 100644
index faac958..0000000
--- a/test/data/enm/study-FCSV-b914df95-e3c8-3bcc-aee1-f8b55f200f7d.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-b914df95-e3c8-3bcc-aee1-f8b55f200f7d",
- "owner": {
- "substance": {
- "uuid": "FCSV-43f0ea59-aa2f-31d8-8d87-19c95ec9be18"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.273,
- "errQualifier": "sd",
- "errorValue": 0.014
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.303,
- "errQualifier": "sd",
- "errorValue": 0.029
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 517.7,
- "errQualifier": "sd",
- "errorValue": 0.26
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b93096ce-a550-3127-9d82-e0bed12a4032.json b/test/data/enm/study-FCSV-b93096ce-a550-3127-9d82-e0bed12a4032.json
deleted file mode 100644
index 2cd1f51..0000000
--- a/test/data/enm/study-FCSV-b93096ce-a550-3127-9d82-e0bed12a4032.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-b93096ce-a550-3127-9d82-e0bed12a4032",
- "owner": {
- "substance": {
- "uuid": "FCSV-de7a4a31-ee94-313e-bfc4-acc11f0b56ec"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Ag]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b945de3d-ffc6-3eda-ba70-11031bad3792.json b/test/data/enm/study-FCSV-b945de3d-ffc6-3eda-ba70-11031bad3792.json
deleted file mode 100644
index 475c9dc..0000000
--- a/test/data/enm/study-FCSV-b945de3d-ffc6-3eda-ba70-11031bad3792.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-b945de3d-ffc6-3eda-ba70-11031bad3792",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f5cd32a-3350-300b-91d0-87000ee5d7ee"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b94e532f-3bfd-3b3e-a0dc-3fc3424d6079.json b/test/data/enm/study-FCSV-b94e532f-3bfd-3b3e-a0dc-3fc3424d6079.json
deleted file mode 100644
index ec41a8f..0000000
--- a/test/data/enm/study-FCSV-b94e532f-3bfd-3b3e-a0dc-3fc3424d6079.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-b94e532f-3bfd-3b3e-a0dc-3fc3424d6079",
- "owner": {
- "substance": {
- "uuid": "FCSV-de6203a6-aea6-3910-8f49-598f80ab6a17"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.304,
- "errQualifier": "sd",
- "errorValue": 0.005
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.311,
- "errQualifier": "sd",
- "errorValue": 0.004
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 527.13,
- "errQualifier": "sd",
- "errorValue": 0.51
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b95a7fda-2885-373b-a363-16779a2758e5.json b/test/data/enm/study-FCSV-b95a7fda-2885-373b-a363-16779a2758e5.json
deleted file mode 100644
index f87243b..0000000
--- a/test/data/enm/study-FCSV-b95a7fda-2885-373b-a363-16779a2758e5.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-b95a7fda-2885-373b-a363-16779a2758e5",
- "owner": {
- "substance": {
- "uuid": "FCSV-4026a85b-f254-3d35-bd77-c634d38e4a22"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.293,
- "errQualifier": "sd",
- "errorValue": 0.082
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.504,
- "errQualifier": "sd",
- "errorValue": 0.015
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 520.6,
- "errQualifier": "sd",
- "errorValue": 0.66
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b99ae7e0-5ee4-366b-9046-91dd87086d5c.json b/test/data/enm/study-FCSV-b99ae7e0-5ee4-366b-9046-91dd87086d5c.json
deleted file mode 100644
index 7c5ce33..0000000
--- a/test/data/enm/study-FCSV-b99ae7e0-5ee4-366b-9046-91dd87086d5c.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-b99ae7e0-5ee4-366b-9046-91dd87086d5c",
- "owner": {
- "substance": {
- "uuid": "FCSV-1180669a-fc30-3bc1-b53e-6a200c4248e4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b9a50179-8b81-3bde-8f21-91cdb9189e25.json b/test/data/enm/study-FCSV-b9a50179-8b81-3bde-8f21-91cdb9189e25.json
deleted file mode 100644
index c5797d6..0000000
--- a/test/data/enm/study-FCSV-b9a50179-8b81-3bde-8f21-91cdb9189e25.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-b9a50179-8b81-3bde-8f21-91cdb9189e25",
- "owner": {
- "substance": {
- "uuid": "FCSV-9a56b1e5-2e22-31c4-b979-e8e9fee728c6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.322,
- "errQualifier": "sd",
- "errorValue": 0.006
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 0.397,
- "errQualifier": "sd",
- "errorValue": 0.035
- }
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- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
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- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 526.9,
- "errQualifier": "sd",
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-b9a8ad63-a63a-3a3a-884c-7fb4c398c7cf.json b/test/data/enm/study-FCSV-b9a8ad63-a63a-3a3a-884c-7fb4c398c7cf.json
deleted file mode 100644
index 660416c..0000000
--- a/test/data/enm/study-FCSV-b9a8ad63-a63a-3a3a-884c-7fb4c398c7cf.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-b9a8ad63-a63a-3a3a-884c-7fb4c398c7cf",
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
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- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
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- "title": "4.99 Physico chemical properties (other)"
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- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
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- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
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- "loQualifier": "mean",
- "loValue": 0.229,
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- "errorValue": 0.01
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- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
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- "MEDIUM": "Human serum (Sigma #H4522)"
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- "loQualifier": "mean",
- "loValue": 0.27,
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diff --git a/test/data/enm/study-FCSV-b9b2b6f4-facc-398d-a804-d2a486650326.json b/test/data/enm/study-FCSV-b9b2b6f4-facc-398d-a804-d2a486650326.json
deleted file mode 100644
index 727d1ef..0000000
--- a/test/data/enm/study-FCSV-b9b2b6f4-facc-398d-a804-d2a486650326.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-b9b2b6f4-facc-398d-a804-d2a486650326",
- "owner": {
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
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- "doi: 10.1021/nn406018q"
- ]
- },
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- "testmat_form": null
- },
- "reliability": {
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- "loQualifier": "mean",
- "loValue": 0.043,
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- {
- "endpoint": "Polydispersity index",
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- "MEDIUM": "Human serum (Sigma #H4522)"
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- "result": {
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- "loQualifier": "mean",
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diff --git a/test/data/enm/study-FCSV-ba0e918e-80e9-375f-baba-7f17b7cd7e00.json b/test/data/enm/study-FCSV-ba0e918e-80e9-375f-baba-7f17b7cd7e00.json
deleted file mode 100644
index 8bdb429..0000000
--- a/test/data/enm/study-FCSV-ba0e918e-80e9-375f-baba-7f17b7cd7e00.json
+++ /dev/null
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-{
- "uuid": "FCSV-ba0e918e-80e9-375f-baba-7f17b7cd7e00",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
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- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
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- "doi: 10.1021/nn406018q"
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- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
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- "SEQ_NUM": null
- },
- "result": {
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- "endpoint": "Density",
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- "Remark": null,
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- "result": {
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- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
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- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
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- {
- "endpoint": "Mol/NP",
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- "loValue": 0.0
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- "result": {
- "unit": "cm^2/NP",
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diff --git a/test/data/enm/study-FCSV-ba509f05-395d-3c29-9f75-9e5a7f2c0d60.json b/test/data/enm/study-FCSV-ba509f05-395d-3c29-9f75-9e5a7f2c0d60.json
deleted file mode 100644
index e3f47fc..0000000
--- a/test/data/enm/study-FCSV-ba509f05-395d-3c29-9f75-9e5a7f2c0d60.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-ba509f05-395d-3c29-9f75-9e5a7f2c0d60",
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- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
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- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- },
- "parameters": {
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- "Type of method": "ICP-AES",
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- "effects": [
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- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
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- "result": {
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- "loQualifier": "mean",
- "loValue": 0.012,
- "errQualifier": "sd",
- "errorValue": 0.008
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
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- "result": {
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- "loQualifier": "mean",
- "loValue": -6.426,
- "errQualifier": "std",
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diff --git a/test/data/enm/study-FCSV-ba52a5bd-c1b4-36b8-ab05-d73427f70d65.json b/test/data/enm/study-FCSV-ba52a5bd-c1b4-36b8-ab05-d73427f70d65.json
deleted file mode 100644
index 28058d0..0000000
--- a/test/data/enm/study-FCSV-ba52a5bd-c1b4-36b8-ab05-d73427f70d65.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-ba52a5bd-c1b4-36b8-ab05-d73427f70d65",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- "citation": {
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- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
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- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- {
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- "loQualifier": "mean",
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diff --git a/test/data/enm/study-FCSV-bafa7dbd-ba6b-31b2-bb23-b8efe6558935.json b/test/data/enm/study-FCSV-bafa7dbd-ba6b-31b2-bb23-b8efe6558935.json
deleted file mode 100644
index d123f21..0000000
--- a/test/data/enm/study-FCSV-bafa7dbd-ba6b-31b2-bb23-b8efe6558935.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-bafa7dbd-ba6b-31b2-bb23-b8efe6558935",
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- "citation": {
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- "year": "2014",
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- },
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- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
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- "result": {
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diff --git a/test/data/enm/study-FCSV-bafc610b-e83d-3a1c-a17a-733c8d007a66.json b/test/data/enm/study-FCSV-bafc610b-e83d-3a1c-a17a-733c8d007a66.json
deleted file mode 100644
index 7d27a90..0000000
--- a/test/data/enm/study-FCSV-bafc610b-e83d-3a1c-a17a-733c8d007a66.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-bafc610b-e83d-3a1c-a17a-733c8d007a66",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- "year": "2014",
- "owner": null
- },
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- "category": {
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- "title": "7.99 Toxicity (other)"
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- "endpoint": "Bicinchoninic Acid (BCA) Assay",
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diff --git a/test/data/enm/study-FCSV-bb000300-1d3b-35dc-9cb5-01f4cefc31d9.json b/test/data/enm/study-FCSV-bb000300-1d3b-35dc-9cb5-01f4cefc31d9.json
deleted file mode 100644
index 99c0cf6..0000000
--- a/test/data/enm/study-FCSV-bb000300-1d3b-35dc-9cb5-01f4cefc31d9.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-bb000300-1d3b-35dc-9cb5-01f4cefc31d9",
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- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
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- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
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- "endpoint": "TEM",
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- "parameters": {
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diff --git a/test/data/enm/study-FCSV-bb1efb08-234a-3c89-8352-e7f72785a02e.json b/test/data/enm/study-FCSV-bb1efb08-234a-3c89-8352-e7f72785a02e.json
deleted file mode 100644
index 042d9de..0000000
--- a/test/data/enm/study-FCSV-bb1efb08-234a-3c89-8352-e7f72785a02e.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-bb1efb08-234a-3c89-8352-e7f72785a02e",
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diff --git a/test/data/enm/study-FCSV-bb647692-f1e0-3c97-9997-5b07d2c495fa.json b/test/data/enm/study-FCSV-bb647692-f1e0-3c97-9997-5b07d2c495fa.json
deleted file mode 100644
index 794be6c..0000000
--- a/test/data/enm/study-FCSV-bb647692-f1e0-3c97-9997-5b07d2c495fa.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
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diff --git a/test/data/enm/study-FCSV-bb70e58e-589f-3349-9d3a-b1321ca37bd5.json b/test/data/enm/study-FCSV-bb70e58e-589f-3349-9d3a-b1321ca37bd5.json
deleted file mode 100644
index b59a4c2..0000000
--- a/test/data/enm/study-FCSV-bb70e58e-589f-3349-9d3a-b1321ca37bd5.json
+++ /dev/null
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-{
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-bb7493a6-a0f7-3ab2-9ccc-ed9766a4767e.json b/test/data/enm/study-FCSV-bb7493a6-a0f7-3ab2-9ccc-ed9766a4767e.json
deleted file mode 100644
index c734011..0000000
--- a/test/data/enm/study-FCSV-bb7493a6-a0f7-3ab2-9ccc-ed9766a4767e.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-bb7493a6-a0f7-3ab2-9ccc-ed9766a4767e",
- "owner": {
- "substance": {
- "uuid": "FCSV-8619e6db-2c01-389e-b05b-e75273d18359"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-bb795ff5-8fe2-3edc-8e08-14e23ccd8a96.json b/test/data/enm/study-FCSV-bb795ff5-8fe2-3edc-8e08-14e23ccd8a96.json
deleted file mode 100644
index ca37751..0000000
--- a/test/data/enm/study-FCSV-bb795ff5-8fe2-3edc-8e08-14e23ccd8a96.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-bb795ff5-8fe2-3edc-8e08-14e23ccd8a96",
- "owner": {
- "substance": {
- "uuid": "FCSV-93c29ebf-e80e-354c-893f-923385c72858"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-bbd6f992-fe9b-3560-b011-8174f23e943f.json b/test/data/enm/study-FCSV-bbd6f992-fe9b-3560-b011-8174f23e943f.json
deleted file mode 100644
index d7e60c4..0000000
--- a/test/data/enm/study-FCSV-bbd6f992-fe9b-3560-b011-8174f23e943f.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-bbd6f992-fe9b-3560-b011-8174f23e943f",
- "owner": {
- "substance": {
- "uuid": "FCSV-d1731b11-29a7-3b39-bf48-000a31d9c46b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.191,
- "errQualifier": "sd",
- "errorValue": 0.03
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.308,
- "errQualifier": "sd",
- "errorValue": 0.033
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-bc0de82b-6462-3c68-84d7-a308b769cddb.json b/test/data/enm/study-FCSV-bc0de82b-6462-3c68-84d7-a308b769cddb.json
deleted file mode 100644
index 45b008e..0000000
--- a/test/data/enm/study-FCSV-bc0de82b-6462-3c68-84d7-a308b769cddb.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-bc0de82b-6462-3c68-84d7-a308b769cddb",
- "owner": {
- "substance": {
- "uuid": "FCSV-d677545a-5079-3793-8990-4061a6b254c5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.005,
- "errQualifier": "sd",
- "errorValue": 0.008
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -7.742,
- "errQualifier": "std",
- "errorValue": 2.499
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-bc7d2436-26a2-39d0-a938-8504cdfe6d5d.json b/test/data/enm/study-FCSV-bc7d2436-26a2-39d0-a938-8504cdfe6d5d.json
deleted file mode 100644
index 5f40898..0000000
--- a/test/data/enm/study-FCSV-bc7d2436-26a2-39d0-a938-8504cdfe6d5d.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-bc7d2436-26a2-39d0-a938-8504cdfe6d5d",
- "owner": {
- "substance": {
- "uuid": "FCSV-50aee86c-a3a2-3c46-86bf-5ac25485fc13"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.239,
- "errQualifier": "sd",
- "errorValue": 0.004
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.381,
- "errQualifier": "sd",
- "errorValue": 0.012
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 524.5,
- "errQualifier": "sd",
- "errorValue": 0.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-bca73fcc-5eb8-33d6-881a-83ede6574146.json b/test/data/enm/study-FCSV-bca73fcc-5eb8-33d6-881a-83ede6574146.json
deleted file mode 100644
index 36925ec..0000000
--- a/test/data/enm/study-FCSV-bca73fcc-5eb8-33d6-881a-83ede6574146.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-bca73fcc-5eb8-33d6-881a-83ede6574146",
- "owner": {
- "substance": {
- "uuid": "FCSV-b228fc7b-c407-368a-bc1c-359c7375bb9b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 48.39,
- "errQualifier": "sd",
- "errorValue": 0.28
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 48.76,
- "errQualifier": "sd",
- "errorValue": 1.37
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 48.25,
- "errQualifier": "sd",
- "errorValue": 1.98
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 46.38,
- "errQualifier": "sd",
- "errorValue": 0.89
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 54.21,
- "errQualifier": "sd",
- "errorValue": 1.14
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 44.05,
- "errQualifier": "sd",
- "errorValue": 1.26
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 54.21,
- "errQualifier": "sd",
- "errorValue": 3.79
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 51.09,
- "errQualifier": "sd",
- "errorValue": 2.29
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-bce0ea48-6572-331a-be1e-2e7f06857932.json b/test/data/enm/study-FCSV-bce0ea48-6572-331a-be1e-2e7f06857932.json
deleted file mode 100644
index 19bf25d..0000000
--- a/test/data/enm/study-FCSV-bce0ea48-6572-331a-be1e-2e7f06857932.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-bce0ea48-6572-331a-be1e-2e7f06857932",
- "owner": {
- "substance": {
- "uuid": "FCSV-9bf04ec0-f6b6-30a6-8970-19a51968532e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-bcf5b80e-489e-3365-aac0-8450d93be79c.json b/test/data/enm/study-FCSV-bcf5b80e-489e-3365-aac0-8450d93be79c.json
deleted file mode 100644
index 69375a8..0000000
--- a/test/data/enm/study-FCSV-bcf5b80e-489e-3365-aac0-8450d93be79c.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-bcf5b80e-489e-3365-aac0-8450d93be79c",
- "owner": {
- "substance": {
- "uuid": "FCSV-ff7e8515-cfad-3d76-a918-d6eeab10a91d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": 12.19,
- "errQualifier": "sd",
- "errorValue": 3.54
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -6.48,
- "errQualifier": "sd",
- "errorValue": 2.91
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-bd330e58-97cb-30cf-8079-3677d032c17e.json b/test/data/enm/study-FCSV-bd330e58-97cb-30cf-8079-3677d032c17e.json
deleted file mode 100644
index 5962c93..0000000
--- a/test/data/enm/study-FCSV-bd330e58-97cb-30cf-8079-3677d032c17e.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-bd330e58-97cb-30cf-8079-3677d032c17e",
- "owner": {
- "substance": {
- "uuid": "FCSV-a7f3867d-85fc-33ab-8167-66b73c818f31"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 40.47,
- "errQualifier": "sd",
- "errorValue": 0.9
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 68.42,
- "errQualifier": "sd",
- "errorValue": 3.09
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 29.57,
- "errQualifier": "sd",
- "errorValue": 11.07
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 46.03,
- "errQualifier": "sd",
- "errorValue": 23.02
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 55.68,
- "errQualifier": "sd",
- "errorValue": 10.52
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 25.45,
- "errQualifier": "sd",
- "errorValue": 16.82
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 55.68,
- "errQualifier": "sd",
- "errorValue": 4.21
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 104.54,
- "errQualifier": "sd",
- "errorValue": 28.03
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-bd4134e3-1f1e-36b1-964b-ead3debc811f.json b/test/data/enm/study-FCSV-bd4134e3-1f1e-36b1-964b-ead3debc811f.json
deleted file mode 100644
index e25fed9..0000000
--- a/test/data/enm/study-FCSV-bd4134e3-1f1e-36b1-964b-ead3debc811f.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-bd4134e3-1f1e-36b1-964b-ead3debc811f",
- "owner": {
- "substance": {
- "uuid": "FCSV-0fe5f223-9c02-363c-a23c-70f1f36ffbec"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-bd55db82-9fd4-32ea-b47b-f5682c8ff4e3.json b/test/data/enm/study-FCSV-bd55db82-9fd4-32ea-b47b-f5682c8ff4e3.json
deleted file mode 100644
index ab70e99..0000000
--- a/test/data/enm/study-FCSV-bd55db82-9fd4-32ea-b47b-f5682c8ff4e3.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-bd55db82-9fd4-32ea-b47b-f5682c8ff4e3",
- "owner": {
- "substance": {
- "uuid": "FCSV-7ad8c003-d0ee-3ea6-9374-b6e4d2f33401"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.097,
- "errQualifier": "sd",
- "errorValue": 0.026
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -3.371,
- "errQualifier": "std",
- "errorValue": 0.384
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-bd8ee00a-130c-3174-a06f-6d442775d760.json b/test/data/enm/study-FCSV-bd8ee00a-130c-3174-a06f-6d442775d760.json
deleted file mode 100644
index 8cc4e77..0000000
--- a/test/data/enm/study-FCSV-bd8ee00a-130c-3174-a06f-6d442775d760.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-bd8ee00a-130c-3174-a06f-6d442775d760",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f5cd32a-3350-300b-91d0-87000ee5d7ee"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.497,
- "errQualifier": "sd",
- "errorValue": 0.08
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -1.009,
- "errQualifier": "std",
- "errorValue": 0.233
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-bda85014-7954-3bff-b965-2baf7d64f9db.json b/test/data/enm/study-FCSV-bda85014-7954-3bff-b965-2baf7d64f9db.json
deleted file mode 100644
index 519c9a6..0000000
--- a/test/data/enm/study-FCSV-bda85014-7954-3bff-b965-2baf7d64f9db.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-bda85014-7954-3bff-b965-2baf7d64f9db",
- "owner": {
- "substance": {
- "uuid": "FCSV-2b9a077f-bef3-3ffd-a83a-77dd85db129a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-bdbfb5d8-281d-3193-8354-9771e698c8c0.json b/test/data/enm/study-FCSV-bdbfb5d8-281d-3193-8354-9771e698c8c0.json
deleted file mode 100644
index 346d77e..0000000
--- a/test/data/enm/study-FCSV-bdbfb5d8-281d-3193-8354-9771e698c8c0.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-bdbfb5d8-281d-3193-8354-9771e698c8c0",
- "owner": {
- "substance": {
- "uuid": "FCSV-c2bce3a6-e09a-3fdc-a1f5-2281b22bb892"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 468.291,
- "errQualifier": "sd",
- "errorValue": 12.915
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.026
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-be057030-4bde-39ab-af19-f9103812e707.json b/test/data/enm/study-FCSV-be057030-4bde-39ab-af19-f9103812e707.json
deleted file mode 100644
index ee12f84..0000000
--- a/test/data/enm/study-FCSV-be057030-4bde-39ab-af19-f9103812e707.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-be057030-4bde-39ab-af19-f9103812e707",
- "owner": {
- "substance": {
- "uuid": "FCSV-74492618-7ff6-39c9-b396-8d7465109083"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-be0e1f98-4324-3e4a-869d-9202feba537a.json b/test/data/enm/study-FCSV-be0e1f98-4324-3e4a-869d-9202feba537a.json
deleted file mode 100644
index ea0d722..0000000
--- a/test/data/enm/study-FCSV-be0e1f98-4324-3e4a-869d-9202feba537a.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-be0e1f98-4324-3e4a-869d-9202feba537a",
- "owner": {
- "substance": {
- "uuid": "FCSV-5c14595c-0e23-3f37-aaad-9988eba09196"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.017,
- "errQualifier": "sd",
- "errorValue": 0.004
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -5.86,
- "errQualifier": "std",
- "errorValue": 0.339
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-be430e3a-3ab6-36c6-bcaa-57ea48a3053e.json b/test/data/enm/study-FCSV-be430e3a-3ab6-36c6-bcaa-57ea48a3053e.json
deleted file mode 100644
index 4b029cd..0000000
--- a/test/data/enm/study-FCSV-be430e3a-3ab6-36c6-bcaa-57ea48a3053e.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-be430e3a-3ab6-36c6-bcaa-57ea48a3053e",
- "owner": {
- "substance": {
- "uuid": "FCSV-9cc7dd73-d27f-35a0-a3f1-81a18429b76a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 247.019,
- "errQualifier": "sd",
- "errorValue": 15.077
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.022
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-be833d6d-b0fb-382a-a055-9e92c9ee5898.json b/test/data/enm/study-FCSV-be833d6d-b0fb-382a-a055-9e92c9ee5898.json
deleted file mode 100644
index ea62b96..0000000
--- a/test/data/enm/study-FCSV-be833d6d-b0fb-382a-a055-9e92c9ee5898.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-be833d6d-b0fb-382a-a055-9e92c9ee5898",
- "owner": {
- "substance": {
- "uuid": "FCSV-6aea0743-7abb-3448-85ce-961b67fca97f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.582,
- "errQualifier": "sd",
- "errorValue": 0.031
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -0.78,
- "errQualifier": "std",
- "errorValue": 0.078
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-bebd68f0-4319-3926-8467-1c831180d9aa.json b/test/data/enm/study-FCSV-bebd68f0-4319-3926-8467-1c831180d9aa.json
deleted file mode 100644
index 21af97c..0000000
--- a/test/data/enm/study-FCSV-bebd68f0-4319-3926-8467-1c831180d9aa.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-bebd68f0-4319-3926-8467-1c831180d9aa",
- "owner": {
- "substance": {
- "uuid": "FCSV-d1731b11-29a7-3b39-bf48-000a31d9c46b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 1.215,
- "errQualifier": "sd",
- "errorValue": 0.245
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-bf0159c3-cd3a-36d8-8275-669acc3d2b43.json b/test/data/enm/study-FCSV-bf0159c3-cd3a-36d8-8275-669acc3d2b43.json
deleted file mode 100644
index d661c8e..0000000
--- a/test/data/enm/study-FCSV-bf0159c3-cd3a-36d8-8275-669acc3d2b43.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-bf0159c3-cd3a-36d8-8275-669acc3d2b43",
- "owner": {
- "substance": {
- "uuid": "FCSV-d63a1ea0-3194-3019-a9e0-0960e63b5819"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.209,
- "errQualifier": "sd",
- "errorValue": 0.025
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.315,
- "errQualifier": "sd",
- "errorValue": 0.037
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 539.08,
- "errQualifier": "sd",
- "errorValue": 1.26
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-bf390bb6-6209-342a-b72b-019aeebda116.json b/test/data/enm/study-FCSV-bf390bb6-6209-342a-b72b-019aeebda116.json
deleted file mode 100644
index 7833a7c..0000000
--- a/test/data/enm/study-FCSV-bf390bb6-6209-342a-b72b-019aeebda116.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-bf390bb6-6209-342a-b72b-019aeebda116",
- "owner": {
- "substance": {
- "uuid": "FCSV-de7a4a31-ee94-313e-bfc4-acc11f0b56ec"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-bf510912-1531-3e75-8bfa-5d05a57388a0.json b/test/data/enm/study-FCSV-bf510912-1531-3e75-8bfa-5d05a57388a0.json
deleted file mode 100644
index baf0779..0000000
--- a/test/data/enm/study-FCSV-bf510912-1531-3e75-8bfa-5d05a57388a0.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-bf510912-1531-3e75-8bfa-5d05a57388a0",
- "owner": {
- "substance": {
- "uuid": "FCSV-cf1d4fd3-f16b-3680-96fa-0f5e4b9dd485"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-bf9f24b5-37de-30fc-93a9-44db0e75c8c4.json b/test/data/enm/study-FCSV-bf9f24b5-37de-30fc-93a9-44db0e75c8c4.json
deleted file mode 100644
index 90d5800..0000000
--- a/test/data/enm/study-FCSV-bf9f24b5-37de-30fc-93a9-44db0e75c8c4.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-bf9f24b5-37de-30fc-93a9-44db0e75c8c4",
- "owner": {
- "substance": {
- "uuid": "FCSV-6b15ab65-c2d3-3e58-ac04-18d8e1d45a7a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c07c1c6a-c367-3d66-a619-3057fc619d97.json b/test/data/enm/study-FCSV-c07c1c6a-c367-3d66-a619-3057fc619d97.json
deleted file mode 100644
index dc4106c..0000000
--- a/test/data/enm/study-FCSV-c07c1c6a-c367-3d66-a619-3057fc619d97.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-c07c1c6a-c367-3d66-a619-3057fc619d97",
- "owner": {
- "substance": {
- "uuid": "FCSV-b228fc7b-c407-368a-bc1c-359c7375bb9b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -9.71,
- "errQualifier": "sd",
- "errorValue": 6.15
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -2.94,
- "errQualifier": "sd",
- "errorValue": 0.93
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c080009b-8ca3-354d-a0b7-ea44e45ed59c.json b/test/data/enm/study-FCSV-c080009b-8ca3-354d-a0b7-ea44e45ed59c.json
deleted file mode 100644
index 8dd0a56..0000000
--- a/test/data/enm/study-FCSV-c080009b-8ca3-354d-a0b7-ea44e45ed59c.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-c080009b-8ca3-354d-a0b7-ea44e45ed59c",
- "owner": {
- "substance": {
- "uuid": "FCSV-a4df7f03-50e1-387c-b0b7-2ce62ed03a8c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Thiolated L-methionine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c131513f-1227-3c35-91bd-5e122ce8a0b8.json b/test/data/enm/study-FCSV-c131513f-1227-3c35-91bd-5e122ce8a0b8.json
deleted file mode 100644
index 4ee371d..0000000
--- a/test/data/enm/study-FCSV-c131513f-1227-3c35-91bd-5e122ce8a0b8.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-c131513f-1227-3c35-91bd-5e122ce8a0b8",
- "owner": {
- "substance": {
- "uuid": "FCSV-6b15ab65-c2d3-3e58-ac04-18d8e1d45a7a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -21.75,
- "errQualifier": "sd",
- "errorValue": 5.5
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -10.09,
- "errQualifier": "sd",
- "errorValue": 1.32
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c1994336-9594-3241-a196-cf97741443c2.json b/test/data/enm/study-FCSV-c1994336-9594-3241-a196-cf97741443c2.json
deleted file mode 100644
index 396930b..0000000
--- a/test/data/enm/study-FCSV-c1994336-9594-3241-a196-cf97741443c2.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-c1994336-9594-3241-a196-cf97741443c2",
- "owner": {
- "substance": {
- "uuid": "FCSV-9964d099-d8aa-3a89-863c-d69fc921bee2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.172,
- "errQualifier": "sd",
- "errorValue": 0.041
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.14,
- "errQualifier": "sd",
- "errorValue": 0.032
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c1e75aa7-3823-36dc-83cf-3d8c93970b1a.json b/test/data/enm/study-FCSV-c1e75aa7-3823-36dc-83cf-3d8c93970b1a.json
deleted file mode 100644
index f99a10a..0000000
--- a/test/data/enm/study-FCSV-c1e75aa7-3823-36dc-83cf-3d8c93970b1a.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-c1e75aa7-3823-36dc-83cf-3d8c93970b1a",
- "owner": {
- "substance": {
- "uuid": "FCSV-07629748-9b8e-381b-a4e6-79b495404e02"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 5.3,
- "errQualifier": "sd",
- "errorValue": 0.44
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c2326bbb-2d3e-3511-afed-fab5879af615.json b/test/data/enm/study-FCSV-c2326bbb-2d3e-3511-afed-fab5879af615.json
deleted file mode 100644
index ae79b03..0000000
--- a/test/data/enm/study-FCSV-c2326bbb-2d3e-3511-afed-fab5879af615.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-c2326bbb-2d3e-3511-afed-fab5879af615",
- "owner": {
- "substance": {
- "uuid": "FCSV-6ed95128-c2b8-3cfe-a0b4-29d2b06c6bc6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Carboxymethyl-poly(ethylene glycol)-thiol (5kDa) (low density)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c35aa81b-8dd4-39d2-b84b-d8c8219089e8.json b/test/data/enm/study-FCSV-c35aa81b-8dd4-39d2-b84b-d8c8219089e8.json
deleted file mode 100644
index 90fe7a5..0000000
--- a/test/data/enm/study-FCSV-c35aa81b-8dd4-39d2-b84b-d8c8219089e8.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-c35aa81b-8dd4-39d2-b84b-d8c8219089e8",
- "owner": {
- "substance": {
- "uuid": "FCSV-2a853f39-424f-3a63-91f3-1300f85ebe73"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": 13.49,
- "errQualifier": "sd",
- "errorValue": 3.51
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -9.7,
- "errQualifier": "sd",
- "errorValue": 3.94
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c361e844-8bd1-337b-bd06-a9b55d29aaaa.json b/test/data/enm/study-FCSV-c361e844-8bd1-337b-bd06-a9b55d29aaaa.json
deleted file mode 100644
index 07459d3..0000000
--- a/test/data/enm/study-FCSV-c361e844-8bd1-337b-bd06-a9b55d29aaaa.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-c361e844-8bd1-337b-bd06-a9b55d29aaaa",
- "owner": {
- "substance": {
- "uuid": "FCSV-9b1b9ad6-e41d-3ddd-8bea-561af1fc27aa"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
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- },
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- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 235.665,
- "errQualifier": "sd",
- "errorValue": 3.452
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
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- "result": {
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- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
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- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
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diff --git a/test/data/enm/study-FCSV-c36bff37-d777-30d1-b084-ce62c6df2481.json b/test/data/enm/study-FCSV-c36bff37-d777-30d1-b084-ce62c6df2481.json
deleted file mode 100644
index 36adc03..0000000
--- a/test/data/enm/study-FCSV-c36bff37-d777-30d1-b084-ce62c6df2481.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-c36bff37-d777-30d1-b084-ce62c6df2481",
- "owner": {
- "substance": {
- "uuid": "FCSV-eec391e5-065c-32c1-89ca-3eb40260c1a8"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- "parameters": {
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- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.744,
- "errQualifier": "sd",
- "errorValue": 0.397
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": -0.427,
- "errQualifier": "std",
- "errorValue": 0.77
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-c3b79fad-633a-39f9-abb1-ac6a5cbd2f64.json b/test/data/enm/study-FCSV-c3b79fad-633a-39f9-abb1-ac6a5cbd2f64.json
deleted file mode 100644
index 0b1141f..0000000
--- a/test/data/enm/study-FCSV-c3b79fad-633a-39f9-abb1-ac6a5cbd2f64.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-c3b79fad-633a-39f9-abb1-ac6a5cbd2f64",
- "owner": {
- "substance": {
- "uuid": "FCSV-9df9ed76-5f94-3ecb-b661-a56e168a71bf"
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
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- ""
- ]
- },
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- "TYPE": {
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- },
- "result": {
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- "textValue": "Amino-poly(ethylene glycol)-thiol (5kDa)"
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- }
- ]
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diff --git a/test/data/enm/study-FCSV-c453f960-56e1-3c52-b674-45ebdae09a57.json b/test/data/enm/study-FCSV-c453f960-56e1-3c52-b674-45ebdae09a57.json
deleted file mode 100644
index 53a35a8..0000000
--- a/test/data/enm/study-FCSV-c453f960-56e1-3c52-b674-45ebdae09a57.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-c453f960-56e1-3c52-b674-45ebdae09a57",
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- "uuid": "FCSV-d63a1ea0-3194-3019-a9e0-0960e63b5819"
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
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- },
- "reliability": {
- "r_isRobustStudy": "false",
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- "result": {
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- "loQualifier": "mean",
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- "errQualifier": "sd",
- "errorValue": 2.89
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -8.97,
- "errQualifier": "sd",
- "errorValue": 1.16
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c4633659-4266-3651-86c0-9b7a4c3824ff.json b/test/data/enm/study-FCSV-c4633659-4266-3651-86c0-9b7a4c3824ff.json
deleted file mode 100644
index 4f6cb27..0000000
--- a/test/data/enm/study-FCSV-c4633659-4266-3651-86c0-9b7a4c3824ff.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-c4633659-4266-3651-86c0-9b7a4c3824ff",
- "owner": {
- "substance": {
- "uuid": "FCSV-1f4a28c8-ecc6-342f-8cbf-1ed579dd34f4"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
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- "reliability": {
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- "Remark": null,
- "TYPE": {
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- "loValue": "CORE"
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- },
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- "textValue": "[Ag]"
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diff --git a/test/data/enm/study-FCSV-c4a148fe-4dc7-33c3-b1cc-118db231cad0.json b/test/data/enm/study-FCSV-c4a148fe-4dc7-33c3-b1cc-118db231cad0.json
deleted file mode 100644
index f3ce817..0000000
--- a/test/data/enm/study-FCSV-c4a148fe-4dc7-33c3-b1cc-118db231cad0.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-c4a148fe-4dc7-33c3-b1cc-118db231cad0",
- "owner": {
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- "uuid": "FCSV-5c14595c-0e23-3f37-aaad-9988eba09196"
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
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- "r_studyResultType": "experimental result",
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- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Core size",
- "conditions": {
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
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- "errQualifier": "sd",
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- },
- {
- "endpoint": "Density",
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- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
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- "Remark": null,
- "SEQ_NUM": null
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- "result": {
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- "loQualifier": "",
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- }
- },
- {
- "endpoint": "SA/NP",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
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diff --git a/test/data/enm/study-FCSV-c4bd281f-3e3d-3098-b446-c29058e05000.json b/test/data/enm/study-FCSV-c4bd281f-3e3d-3098-b446-c29058e05000.json
deleted file mode 100644
index baa6190..0000000
--- a/test/data/enm/study-FCSV-c4bd281f-3e3d-3098-b446-c29058e05000.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-c4bd281f-3e3d-3098-b446-c29058e05000",
- "owner": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
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- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- "parameters": {
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- "Type of method": "ICP-AES",
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- "effects": [
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- "conditions": {
- "Cell": "A549"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 0.617,
- "errQualifier": "sd",
- "errorValue": 0.077
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
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- "result": {
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- "loQualifier": "mean",
- "loValue": -0.698,
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- "errorValue": 0.18
- }
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diff --git a/test/data/enm/study-FCSV-c50ad51d-e653-3ba8-9c6b-aa770cfe643c.json b/test/data/enm/study-FCSV-c50ad51d-e653-3ba8-9c6b-aa770cfe643c.json
deleted file mode 100644
index f97f541..0000000
--- a/test/data/enm/study-FCSV-c50ad51d-e653-3ba8-9c6b-aa770cfe643c.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-c50ad51d-e653-3ba8-9c6b-aa770cfe643c",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
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- ]
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- }
- },
- "result": {
- "unit": null,
- "textValue": "Thiolated poly(ethyleneimine)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c56e4402-6bfe-38ab-b1e6-0f5ce7c5f1bb.json b/test/data/enm/study-FCSV-c56e4402-6bfe-38ab-b1e6-0f5ce7c5f1bb.json
deleted file mode 100644
index 9450890..0000000
--- a/test/data/enm/study-FCSV-c56e4402-6bfe-38ab-b1e6-0f5ce7c5f1bb.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-c56e4402-6bfe-38ab-b1e6-0f5ce7c5f1bb",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
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- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -37.05,
- "errQualifier": "sd",
- "errorValue": 1.09
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": -10.66,
- "errQualifier": "sd",
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diff --git a/test/data/enm/study-FCSV-c57f3724-3bad-35b7-a6b5-cc75cb2c4b5c.json b/test/data/enm/study-FCSV-c57f3724-3bad-35b7-a6b5-cc75cb2c4b5c.json
deleted file mode 100644
index ef5dea9..0000000
--- a/test/data/enm/study-FCSV-c57f3724-3bad-35b7-a6b5-cc75cb2c4b5c.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-c57f3724-3bad-35b7-a6b5-cc75cb2c4b5c",
- "owner": {
- "substance": {
- "uuid": "FCSV-a7dbc5da-6ccd-3df5-b2f1-467f625a08cb"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c5ba0dbb-8bad-3aba-8a1a-9816d7c994d6.json b/test/data/enm/study-FCSV-c5ba0dbb-8bad-3aba-8a1a-9816d7c994d6.json
deleted file mode 100644
index 60710da..0000000
--- a/test/data/enm/study-FCSV-c5ba0dbb-8bad-3aba-8a1a-9816d7c994d6.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-c5ba0dbb-8bad-3aba-8a1a-9816d7c994d6",
- "owner": {
- "substance": {
- "uuid": "FCSV-0e958d54-f957-37d2-91d1-ee8d9961548e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.434,
- "errQualifier": "sd",
- "errorValue": 0.019
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -1.204,
- "errQualifier": "std",
- "errorValue": 0.064
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c5f50c22-dd04-3dbf-aa5f-1b3bbfb107a0.json b/test/data/enm/study-FCSV-c5f50c22-dd04-3dbf-aa5f-1b3bbfb107a0.json
deleted file mode 100644
index cd00f33..0000000
--- a/test/data/enm/study-FCSV-c5f50c22-dd04-3dbf-aa5f-1b3bbfb107a0.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-c5f50c22-dd04-3dbf-aa5f-1b3bbfb107a0",
- "owner": {
- "substance": {
- "uuid": "FCSV-9cc7dd73-d27f-35a0-a3f1-81a18429b76a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.022,
- "errQualifier": "sd",
- "errorValue": 0.003
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -5.505,
- "errQualifier": "std",
- "errorValue": 0.222
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c623b0c9-5a99-3889-8446-9004f87fecc3.json b/test/data/enm/study-FCSV-c623b0c9-5a99-3889-8446-9004f87fecc3.json
deleted file mode 100644
index 0b12c71..0000000
--- a/test/data/enm/study-FCSV-c623b0c9-5a99-3889-8446-9004f87fecc3.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-c623b0c9-5a99-3889-8446-9004f87fecc3",
- "owner": {
- "substance": {
- "uuid": "FCSV-aab0ef77-8a71-36d7-9185-d2f76b9e3567"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.213,
- "errQualifier": "sd",
- "errorValue": 0.04
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.178,
- "errQualifier": "sd",
- "errorValue": 0.016
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c67af91e-899d-3119-87a8-f6e8a8d443d4.json b/test/data/enm/study-FCSV-c67af91e-899d-3119-87a8-f6e8a8d443d4.json
deleted file mode 100644
index 84d438f..0000000
--- a/test/data/enm/study-FCSV-c67af91e-899d-3119-87a8-f6e8a8d443d4.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-c67af91e-899d-3119-87a8-f6e8a8d443d4",
- "owner": {
- "substance": {
- "uuid": "FCSV-ded649fa-97e1-3ec6-bb3d-623506389ee0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c6a732b8-281a-34af-aa83-c8b4e46bc07f.json b/test/data/enm/study-FCSV-c6a732b8-281a-34af-aa83-c8b4e46bc07f.json
deleted file mode 100644
index 9c15af7..0000000
--- a/test/data/enm/study-FCSV-c6a732b8-281a-34af-aa83-c8b4e46bc07f.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-c6a732b8-281a-34af-aa83-c8b4e46bc07f",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc488cf3-986d-34cf-9ee7-12f98873dfe4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.194,
- "errQualifier": "sd",
- "errorValue": 0.046
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.353,
- "errQualifier": "sd",
- "errorValue": 0.065
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 523.03,
- "errQualifier": "sd",
- "errorValue": 0.21
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c6afa419-a735-3ca5-97b1-005f10e4a662.json b/test/data/enm/study-FCSV-c6afa419-a735-3ca5-97b1-005f10e4a662.json
deleted file mode 100644
index b69f88f..0000000
--- a/test/data/enm/study-FCSV-c6afa419-a735-3ca5-97b1-005f10e4a662.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-c6afa419-a735-3ca5-97b1-005f10e4a662",
- "owner": {
- "substance": {
- "uuid": "FCSV-de6203a6-aea6-3910-8f49-598f80ab6a17"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 4.499,
- "errQualifier": "sd",
- "errorValue": 1.098
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-c6b1e2c2-bca8-3b09-a205-949cbcbcc8bd.json b/test/data/enm/study-FCSV-c6b1e2c2-bca8-3b09-a205-949cbcbcc8bd.json
deleted file mode 100644
index f1e67b1..0000000
--- a/test/data/enm/study-FCSV-c6b1e2c2-bca8-3b09-a205-949cbcbcc8bd.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-c6b1e2c2-bca8-3b09-a205-949cbcbcc8bd",
- "owner": {
- "substance": {
- "uuid": "FCSV-815715e8-0cc8-3641-897c-4530d961cfe0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 73.95,
- "errQualifier": "sd",
- "errorValue": 3.07
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 105.18,
- "errQualifier": "sd",
- "errorValue": 2.03
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 73.09,
- "errQualifier": "sd",
- "errorValue": 5.8
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 102.81,
- "errQualifier": "sd",
- "errorValue": 3.02
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 78.94,
- "errQualifier": "sd",
- "errorValue": 6.5
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 97.46,
- "errQualifier": "sd",
- "errorValue": 4.93
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 78.94,
- "errQualifier": "sd",
- "errorValue": 3.68
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 106.02,
- "errQualifier": "sd",
- "errorValue": 1.51
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c6c58a39-1c8f-3521-b926-92a209943dbf.json b/test/data/enm/study-FCSV-c6c58a39-1c8f-3521-b926-92a209943dbf.json
deleted file mode 100644
index 098aa56..0000000
--- a/test/data/enm/study-FCSV-c6c58a39-1c8f-3521-b926-92a209943dbf.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-c6c58a39-1c8f-3521-b926-92a209943dbf",
- "owner": {
- "substance": {
- "uuid": "FCSV-ff7d2c8c-3d2f-316a-b890-6f9e7d88df4c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Methoxy-poly(ethylene glycol)-thiol (20kDa) (low density)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c6e6506a-fded-3c04-879c-20e371359833.json b/test/data/enm/study-FCSV-c6e6506a-fded-3c04-879c-20e371359833.json
deleted file mode 100644
index 19ead92..0000000
--- a/test/data/enm/study-FCSV-c6e6506a-fded-3c04-879c-20e371359833.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-c6e6506a-fded-3c04-879c-20e371359833",
- "owner": {
- "substance": {
- "uuid": "FCSV-0542c513-7015-3169-a1c1-e00f811a7ba0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.006,
- "errQualifier": "sd",
- "errorValue": 0.003
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -7.459,
- "errQualifier": "std",
- "errorValue": 0.674
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c70ebd26-bc4a-3345-8f14-5d1d53faeae0.json b/test/data/enm/study-FCSV-c70ebd26-bc4a-3345-8f14-5d1d53faeae0.json
deleted file mode 100644
index 8eec6eb..0000000
--- a/test/data/enm/study-FCSV-c70ebd26-bc4a-3345-8f14-5d1d53faeae0.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-c70ebd26-bc4a-3345-8f14-5d1d53faeae0",
- "owner": {
- "substance": {
- "uuid": "FCSV-2ed7ebf8-d11d-3f39-8f05-b0132ec4d7e0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c7524fd7-6b2e-39b6-8ba6-bc6e6739d138.json b/test/data/enm/study-FCSV-c7524fd7-6b2e-39b6-8ba6-bc6e6739d138.json
deleted file mode 100644
index 803f7c9..0000000
--- a/test/data/enm/study-FCSV-c7524fd7-6b2e-39b6-8ba6-bc6e6739d138.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-c7524fd7-6b2e-39b6-8ba6-bc6e6739d138",
- "owner": {
- "substance": {
- "uuid": "FCSV-ff7e8515-cfad-3d76-a918-d6eeab10a91d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.41,
- "errQualifier": "sd",
- "errorValue": 0.035
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.31,
- "errQualifier": "sd",
- "errorValue": 0.015
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c78490e8-81b3-3981-b187-acb5639e4b9e.json b/test/data/enm/study-FCSV-c78490e8-81b3-3981-b187-acb5639e4b9e.json
deleted file mode 100644
index c19a8a8..0000000
--- a/test/data/enm/study-FCSV-c78490e8-81b3-3981-b187-acb5639e4b9e.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-c78490e8-81b3-3981-b187-acb5639e4b9e",
- "owner": {
- "substance": {
- "uuid": "FCSV-74492618-7ff6-39c9-b396-8d7465109083"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.282,
- "errQualifier": "sd",
- "errorValue": 0.031
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.303,
- "errQualifier": "sd",
- "errorValue": 0.048
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 523.5,
- "errQualifier": "sd",
- "errorValue": 0.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c841fe15-fb44-3d0b-974b-5609a8f2d387.json b/test/data/enm/study-FCSV-c841fe15-fb44-3d0b-974b-5609a8f2d387.json
deleted file mode 100644
index e7cdce4..0000000
--- a/test/data/enm/study-FCSV-c841fe15-fb44-3d0b-974b-5609a8f2d387.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-c841fe15-fb44-3d0b-974b-5609a8f2d387",
- "owner": {
- "substance": {
- "uuid": "FCSV-45779e93-a25d-39cc-9294-afc0b59f3cd6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 258.61,
- "errQualifier": "sd",
- "errorValue": 16.624
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.008
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c8746690-8cc3-37a7-a92a-016bdaee9d6b.json b/test/data/enm/study-FCSV-c8746690-8cc3-37a7-a92a-016bdaee9d6b.json
deleted file mode 100644
index d3d8510..0000000
--- a/test/data/enm/study-FCSV-c8746690-8cc3-37a7-a92a-016bdaee9d6b.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-c8746690-8cc3-37a7-a92a-016bdaee9d6b",
- "owner": {
- "substance": {
- "uuid": "FCSV-9505d90b-f90b-3c94-a6cc-e4ee4c8ec46f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.463,
- "errQualifier": "sd",
- "errorValue": 0.389
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c889407c-55e8-3548-bfbb-116a3bf8e4fd.json b/test/data/enm/study-FCSV-c889407c-55e8-3548-bfbb-116a3bf8e4fd.json
deleted file mode 100644
index 337a42b..0000000
--- a/test/data/enm/study-FCSV-c889407c-55e8-3548-bfbb-116a3bf8e4fd.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-c889407c-55e8-3548-bfbb-116a3bf8e4fd",
- "owner": {
- "substance": {
- "uuid": "FCSV-45779e93-a25d-39cc-9294-afc0b59f3cd6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 1.67,
- "errQualifier": "sd",
- "errorValue": 0.078
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c8d29f8c-2d7c-3b08-b9ff-ec97f7d56af6.json b/test/data/enm/study-FCSV-c8d29f8c-2d7c-3b08-b9ff-ec97f7d56af6.json
deleted file mode 100644
index 7f71649..0000000
--- a/test/data/enm/study-FCSV-c8d29f8c-2d7c-3b08-b9ff-ec97f7d56af6.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-c8d29f8c-2d7c-3b08-b9ff-ec97f7d56af6",
- "owner": {
- "substance": {
- "uuid": "FCSV-8dc5c24b-2e89-3833-b94d-920674a956a0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 22.63,
- "errQualifier": "sd",
- "errorValue": 1.06
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 45.52,
- "errQualifier": "sd",
- "errorValue": 2.94
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 21.04,
- "errQualifier": "sd",
- "errorValue": 0.75
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 44.96,
- "errQualifier": "sd",
- "errorValue": 3.05
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 22.4,
- "errQualifier": "sd",
- "errorValue": 0.51
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 39.05,
- "errQualifier": "sd",
- "errorValue": 2.64
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 22.4,
- "errQualifier": "sd",
- "errorValue": 1.42
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 51.1,
- "errQualifier": "sd",
- "errorValue": 5.92
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c959036a-4caa-3223-b95c-cbed468229aa.json b/test/data/enm/study-FCSV-c959036a-4caa-3223-b95c-cbed468229aa.json
deleted file mode 100644
index 7824d70..0000000
--- a/test/data/enm/study-FCSV-c959036a-4caa-3223-b95c-cbed468229aa.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-c959036a-4caa-3223-b95c-cbed468229aa",
- "owner": {
- "substance": {
- "uuid": "FCSV-45779e93-a25d-39cc-9294-afc0b59f3cd6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.211,
- "errQualifier": "sd",
- "errorValue": 0.003
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.264,
- "errQualifier": "sd",
- "errorValue": 0.048
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 519.07,
- "errQualifier": "sd",
- "errorValue": 0.49
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c980e9f7-bbcf-3930-bff4-3cee5b5e5187.json b/test/data/enm/study-FCSV-c980e9f7-bbcf-3930-bff4-3cee5b5e5187.json
deleted file mode 100644
index 9b93b80..0000000
--- a/test/data/enm/study-FCSV-c980e9f7-bbcf-3930-bff4-3cee5b5e5187.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-c980e9f7-bbcf-3930-bff4-3cee5b5e5187",
- "owner": {
- "substance": {
- "uuid": "FCSV-47e98c51-7508-362f-84d3-494bb124b849"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 265.51,
- "errQualifier": "sd",
- "errorValue": 8.544
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.064
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-c9f52c12-9b98-3a83-852d-dbb866cbff1e.json b/test/data/enm/study-FCSV-c9f52c12-9b98-3a83-852d-dbb866cbff1e.json
deleted file mode 100644
index 8d81ce4..0000000
--- a/test/data/enm/study-FCSV-c9f52c12-9b98-3a83-852d-dbb866cbff1e.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-c9f52c12-9b98-3a83-852d-dbb866cbff1e",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc2c755f-9eee-30e3-9e98-1fbb2397c980"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_value": null
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- "effects": [
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- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 31.6,
- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
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- },
- "result": {
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- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
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- "endpoint": "SA/NP",
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- "SEQ_NUM": null
- },
- "result": {
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- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ca0e19fb-d7f1-3beb-81e4-a862acf63690.json b/test/data/enm/study-FCSV-ca0e19fb-d7f1-3beb-81e4-a862acf63690.json
deleted file mode 100644
index e2643fb..0000000
--- a/test/data/enm/study-FCSV-ca0e19fb-d7f1-3beb-81e4-a862acf63690.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-ca0e19fb-d7f1-3beb-81e4-a862acf63690",
- "owner": {
- "substance": {
- "uuid": "FCSV-a153cba3-a82d-3e3c-bcbd-335cc5155f44"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- },
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- },
- "effects": [
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- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.23,
- "errQualifier": "sd",
- "errorValue": 0.129
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.201,
- "errQualifier": "sd",
- "errorValue": 0.025
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ca1a9255-2f77-3830-a12b-297670751f01.json b/test/data/enm/study-FCSV-ca1a9255-2f77-3830-a12b-297670751f01.json
deleted file mode 100644
index 26018fc..0000000
--- a/test/data/enm/study-FCSV-ca1a9255-2f77-3830-a12b-297670751f01.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-ca1a9255-2f77-3830-a12b-297670751f01",
- "owner": {
- "substance": {
- "uuid": "FCSV-a7dbc5da-6ccd-3df5-b2f1-467f625a08cb"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "effects": [
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- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 6.05,
- "errQualifier": "sd",
- "errorValue": 0.79
- }
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diff --git a/test/data/enm/study-FCSV-ca4f81ad-4bac-3a30-82de-fc6acd72a43c.json b/test/data/enm/study-FCSV-ca4f81ad-4bac-3a30-82de-fc6acd72a43c.json
deleted file mode 100644
index e54124e..0000000
--- a/test/data/enm/study-FCSV-ca4f81ad-4bac-3a30-82de-fc6acd72a43c.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-ca4f81ad-4bac-3a30-82de-fc6acd72a43c",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
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- "effects": [
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- "result": {
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- "loQualifier": "mean",
- "loValue": 0.222,
- "errQualifier": "sd",
- "errorValue": 0.006
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- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.291,
- "errQualifier": "sd",
- "errorValue": 0.01
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- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
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- "result": {
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- "loValue": 522.47,
- "errQualifier": "sd",
- "errorValue": 0.21
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- }
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diff --git a/test/data/enm/study-FCSV-ca594a9d-10f8-3ec3-b9fc-e61acd52a99c.json b/test/data/enm/study-FCSV-ca594a9d-10f8-3ec3-b9fc-e61acd52a99c.json
deleted file mode 100644
index 7d50a30..0000000
--- a/test/data/enm/study-FCSV-ca594a9d-10f8-3ec3-b9fc-e61acd52a99c.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-ca594a9d-10f8-3ec3-b9fc-e61acd52a99c",
- "owner": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 252.069,
- "errQualifier": "sd",
- "errorValue": 34.575
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
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diff --git a/test/data/enm/study-FCSV-ca76f47a-a412-3403-b9a7-0849ae4a53d8.json b/test/data/enm/study-FCSV-ca76f47a-a412-3403-b9a7-0849ae4a53d8.json
deleted file mode 100644
index 75be701..0000000
--- a/test/data/enm/study-FCSV-ca76f47a-a412-3403-b9a7-0849ae4a53d8.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-ca76f47a-a412-3403-b9a7-0849ae4a53d8",
- "owner": {
- "substance": {
- "uuid": "FCSV-0d5c0fc7-de56-3507-b651-1c91bf030465"
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
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- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
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- "effects": [
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- "conditions": {
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- "Remark": null,
- "pH": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": -20.4,
- "errQualifier": "sd",
- "errorValue": 6.18
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- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": -8.73,
- "errQualifier": "sd",
- "errorValue": 1.11
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diff --git a/test/data/enm/study-FCSV-cb1c6792-61a7-39f0-b08e-8a864b177b0d.json b/test/data/enm/study-FCSV-cb1c6792-61a7-39f0-b08e-8a864b177b0d.json
deleted file mode 100644
index 0e05eec..0000000
--- a/test/data/enm/study-FCSV-cb1c6792-61a7-39f0-b08e-8a864b177b0d.json
+++ /dev/null
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-{
- "uuid": "FCSV-cb1c6792-61a7-39f0-b08e-8a864b177b0d",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
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- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
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- "parameters": {
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- "Type of method": "DLS",
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- "result": {
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- "loQualifier": "mean",
- "loValue": 0.1,
- "errQualifier": "sd",
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- }
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- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 0.27,
- "errQualifier": "sd",
- "errorValue": 0.004
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diff --git a/test/data/enm/study-FCSV-cb35a264-24a7-3d3c-93b6-9c4679148c96.json b/test/data/enm/study-FCSV-cb35a264-24a7-3d3c-93b6-9c4679148c96.json
deleted file mode 100644
index 7401c39..0000000
--- a/test/data/enm/study-FCSV-cb35a264-24a7-3d3c-93b6-9c4679148c96.json
+++ /dev/null
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-{
- "uuid": "FCSV-cb35a264-24a7-3d3c-93b6-9c4679148c96",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
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- ""
- ]
- },
- "parameters": {
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- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
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- "effects": [
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
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- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "3-Mercaptopropionic acid"
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- ]
-}
diff --git a/test/data/enm/study-FCSV-cb4f7ee2-0320-31f3-a709-13084f999d9b.json b/test/data/enm/study-FCSV-cb4f7ee2-0320-31f3-a709-13084f999d9b.json
deleted file mode 100644
index 796455c..0000000
--- a/test/data/enm/study-FCSV-cb4f7ee2-0320-31f3-a709-13084f999d9b.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-cb4f7ee2-0320-31f3-a709-13084f999d9b",
- "owner": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
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- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Ag]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-cbd557b9-7a53-3bcc-b978-9b325996038a.json b/test/data/enm/study-FCSV-cbd557b9-7a53-3bcc-b978-9b325996038a.json
deleted file mode 100644
index b132ed6..0000000
--- a/test/data/enm/study-FCSV-cbd557b9-7a53-3bcc-b978-9b325996038a.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-cbd557b9-7a53-3bcc-b978-9b325996038a",
- "owner": {
- "substance": {
- "uuid": "FCSV-62d68a47-f27e-3d76-a7cf-5cacae221ec7"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Amino-poly(ethylene glycol)-thiol (5kDa)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-cbf15de6-2565-32e0-be98-3531501dadbb.json b/test/data/enm/study-FCSV-cbf15de6-2565-32e0-be98-3531501dadbb.json
deleted file mode 100644
index eb5b964..0000000
--- a/test/data/enm/study-FCSV-cbf15de6-2565-32e0-be98-3531501dadbb.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-cbf15de6-2565-32e0-be98-3531501dadbb",
- "owner": {
- "substance": {
- "uuid": "FCSV-50aee86c-a3a2-3c46-86bf-5ac25485fc13"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": 19.93,
- "errQualifier": "sd",
- "errorValue": 3.51
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -9.61,
- "errQualifier": "sd",
- "errorValue": 3.54
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-cc033080-b0f0-3b18-8b73-cedb239b11aa.json b/test/data/enm/study-FCSV-cc033080-b0f0-3b18-8b73-cedb239b11aa.json
deleted file mode 100644
index 2d1acf1..0000000
--- a/test/data/enm/study-FCSV-cc033080-b0f0-3b18-8b73-cedb239b11aa.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-cc033080-b0f0-3b18-8b73-cedb239b11aa",
- "owner": {
- "substance": {
- "uuid": "FCSV-45779e93-a25d-39cc-9294-afc0b59f3cd6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-cc1e4387-a681-325f-a15f-5fd498836ca4.json b/test/data/enm/study-FCSV-cc1e4387-a681-325f-a15f-5fd498836ca4.json
deleted file mode 100644
index 26a6702..0000000
--- a/test/data/enm/study-FCSV-cc1e4387-a681-325f-a15f-5fd498836ca4.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-cc1e4387-a681-325f-a15f-5fd498836ca4",
- "owner": {
- "substance": {
- "uuid": "FCSV-2b9a077f-bef3-3ffd-a83a-77dd85db129a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-cc8b0a78-19a1-39c1-8a90-a0f54e6b2310.json b/test/data/enm/study-FCSV-cc8b0a78-19a1-39c1-8a90-a0f54e6b2310.json
deleted file mode 100644
index ba07a00..0000000
--- a/test/data/enm/study-FCSV-cc8b0a78-19a1-39c1-8a90-a0f54e6b2310.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-cc8b0a78-19a1-39c1-8a90-a0f54e6b2310",
- "owner": {
- "substance": {
- "uuid": "FCSV-9043e884-a5ba-3fa6-a103-dee0c7b1b3dd"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Thiolated L-tryptophan"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-cc8ba55c-62ce-3d76-ba60-db33a4ae83ef.json b/test/data/enm/study-FCSV-cc8ba55c-62ce-3d76-ba60-db33a4ae83ef.json
deleted file mode 100644
index b4a09ba..0000000
--- a/test/data/enm/study-FCSV-cc8ba55c-62ce-3d76-ba60-db33a4ae83ef.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-cc8ba55c-62ce-3d76-ba60-db33a4ae83ef",
- "owner": {
- "substance": {
- "uuid": "FCSV-ffe19c9e-b1a1-3f38-a149-0d587fc5b172"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ccbeaaae-d483-34dd-be2d-32eba9b44a62.json b/test/data/enm/study-FCSV-ccbeaaae-d483-34dd-be2d-32eba9b44a62.json
deleted file mode 100644
index 61babf4..0000000
--- a/test/data/enm/study-FCSV-ccbeaaae-d483-34dd-be2d-32eba9b44a62.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-ccbeaaae-d483-34dd-be2d-32eba9b44a62",
- "owner": {
- "substance": {
- "uuid": "FCSV-2b9a077f-bef3-3ffd-a83a-77dd85db129a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.168,
- "errQualifier": "sd",
- "errorValue": 0.036
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.163,
- "errQualifier": "sd",
- "errorValue": 0.008
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ccf9ad6a-e23d-3bf3-b073-731ae4252c15.json b/test/data/enm/study-FCSV-ccf9ad6a-e23d-3bf3-b073-731ae4252c15.json
deleted file mode 100644
index 165590a..0000000
--- a/test/data/enm/study-FCSV-ccf9ad6a-e23d-3bf3-b073-731ae4252c15.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-ccf9ad6a-e23d-3bf3-b073-731ae4252c15",
- "owner": {
- "substance": {
- "uuid": "FCSV-130b04ab-86e6-38d6-9276-e2db1b4dcffb"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.245,
- "errQualifier": "sd",
- "errorValue": 0.076
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.376,
- "errQualifier": "sd",
- "errorValue": 0.012
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 522.33,
- "errQualifier": "sd",
- "errorValue": 0.23
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-cd6f398c-533c-395c-9a68-ecb19e4e23c7.json b/test/data/enm/study-FCSV-cd6f398c-533c-395c-9a68-ecb19e4e23c7.json
deleted file mode 100644
index 68671e8..0000000
--- a/test/data/enm/study-FCSV-cd6f398c-533c-395c-9a68-ecb19e4e23c7.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-cd6f398c-533c-395c-9a68-ecb19e4e23c7",
- "owner": {
- "substance": {
- "uuid": "FCSV-e5b47d9a-ba9d-3310-8f92-72aad8f0364d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ce0b214c-f85d-3e7f-90df-ba43c49d311b.json b/test/data/enm/study-FCSV-ce0b214c-f85d-3e7f-90df-ba43c49d311b.json
deleted file mode 100644
index 7a5a241..0000000
--- a/test/data/enm/study-FCSV-ce0b214c-f85d-3e7f-90df-ba43c49d311b.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-ce0b214c-f85d-3e7f-90df-ba43c49d311b",
- "owner": {
- "substance": {
- "uuid": "FCSV-e4b9ce55-bbeb-368b-a1d4-e591b7df742e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 3.615,
- "errQualifier": "sd",
- "errorValue": 0.619
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ce176f78-6009-3e9e-9fb1-48a6723d56f2.json b/test/data/enm/study-FCSV-ce176f78-6009-3e9e-9fb1-48a6723d56f2.json
deleted file mode 100644
index b4f671d..0000000
--- a/test/data/enm/study-FCSV-ce176f78-6009-3e9e-9fb1-48a6723d56f2.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-ce176f78-6009-3e9e-9fb1-48a6723d56f2",
- "owner": {
- "substance": {
- "uuid": "FCSV-4026a85b-f254-3d35-bd77-c634d38e4a22"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -26.65,
- "errQualifier": "sd",
- "errorValue": 5.04
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -8.74,
- "errQualifier": "sd",
- "errorValue": 0.79
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ce4ec6c2-0620-3459-9970-aa3f0949d072.json b/test/data/enm/study-FCSV-ce4ec6c2-0620-3459-9970-aa3f0949d072.json
deleted file mode 100644
index e58fe77..0000000
--- a/test/data/enm/study-FCSV-ce4ec6c2-0620-3459-9970-aa3f0949d072.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-ce4ec6c2-0620-3459-9970-aa3f0949d072",
- "owner": {
- "substance": {
- "uuid": "FCSV-1a71d2b3-8121-3790-a66b-774b12829bb3"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loValue": 0.0
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- },
- {
- "endpoint": "SA/NP",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ce593159-597a-32c2-986b-97ad2a22adbb.json b/test/data/enm/study-FCSV-ce593159-597a-32c2-986b-97ad2a22adbb.json
deleted file mode 100644
index b3b4e54..0000000
--- a/test/data/enm/study-FCSV-ce593159-597a-32c2-986b-97ad2a22adbb.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-ce593159-597a-32c2-986b-97ad2a22adbb",
- "owner": {
- "substance": {
- "uuid": "FCSV-6ed95128-c2b8-3cfe-a0b4-29d2b06c6bc6"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.224,
- "errQualifier": "sd",
- "errorValue": 0.012
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.276,
- "errQualifier": "sd",
- "errorValue": 0.092
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 540.13,
- "errQualifier": "sd",
- "errorValue": 1.07
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ce73229d-49cc-32b0-bb7b-1d4d8057e354.json b/test/data/enm/study-FCSV-ce73229d-49cc-32b0-bb7b-1d4d8057e354.json
deleted file mode 100644
index 845eaa4..0000000
--- a/test/data/enm/study-FCSV-ce73229d-49cc-32b0-bb7b-1d4d8057e354.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-ce73229d-49cc-32b0-bb7b-1d4d8057e354",
- "owner": {
- "substance": {
- "uuid": "FCSV-1842b3a2-413c-327c-a07a-9905269bafb5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.258,
- "errQualifier": "sd",
- "errorValue": 0.028
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.343,
- "errQualifier": "sd",
- "errorValue": 0.077
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 539.93,
- "errQualifier": "sd",
- "errorValue": 1.27
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-cebd923a-59ab-313f-9d83-22e23dd5da9d.json b/test/data/enm/study-FCSV-cebd923a-59ab-313f-9d83-22e23dd5da9d.json
deleted file mode 100644
index 07b931e..0000000
--- a/test/data/enm/study-FCSV-cebd923a-59ab-313f-9d83-22e23dd5da9d.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-cebd923a-59ab-313f-9d83-22e23dd5da9d",
- "owner": {
- "substance": {
- "uuid": "FCSV-a153cba3-a82d-3e3c-bcbd-335cc5155f44"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.237,
- "errQualifier": "sd",
- "errorValue": 0.072
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.301,
- "errQualifier": "sd",
- "errorValue": 0.007
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
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- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 519.13,
- "errQualifier": "sd",
- "errorValue": 0.31
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-cedf33f3-d153-3e30-b960-0135ee562594.json b/test/data/enm/study-FCSV-cedf33f3-d153-3e30-b960-0135ee562594.json
deleted file mode 100644
index 344586d..0000000
--- a/test/data/enm/study-FCSV-cedf33f3-d153-3e30-b960-0135ee562594.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-cedf33f3-d153-3e30-b960-0135ee562594",
- "owner": {
- "substance": {
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
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- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
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- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Core size",
- "conditions": {
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
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- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
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- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
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- ]
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diff --git a/test/data/enm/study-FCSV-cf03c1de-991a-3797-a0bb-e90b3a9a631b.json b/test/data/enm/study-FCSV-cf03c1de-991a-3797-a0bb-e90b3a9a631b.json
deleted file mode 100644
index 9724139..0000000
--- a/test/data/enm/study-FCSV-cf03c1de-991a-3797-a0bb-e90b3a9a631b.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-cf03c1de-991a-3797-a0bb-e90b3a9a631b",
- "owner": {
- "substance": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
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- "testmat_form": null
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- "reliability": {
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- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 5.754,
- "errQualifier": "sd",
- "errorValue": 0.658
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- }
- ]
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diff --git a/test/data/enm/study-FCSV-cf1bdc2a-ebaa-3fe2-8e67-40878294bbd7.json b/test/data/enm/study-FCSV-cf1bdc2a-ebaa-3fe2-8e67-40878294bbd7.json
deleted file mode 100644
index 0869215..0000000
--- a/test/data/enm/study-FCSV-cf1bdc2a-ebaa-3fe2-8e67-40878294bbd7.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-cf1bdc2a-ebaa-3fe2-8e67-40878294bbd7",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
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- "endpoint": "Description",
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- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-cf36f2d9-3862-3acc-94f6-4676919f97f3.json b/test/data/enm/study-FCSV-cf36f2d9-3862-3acc-94f6-4676919f97f3.json
deleted file mode 100644
index edc2c48..0000000
--- a/test/data/enm/study-FCSV-cf36f2d9-3862-3acc-94f6-4676919f97f3.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-cf36f2d9-3862-3acc-94f6-4676919f97f3",
- "owner": {
- "substance": {
- "uuid": "FCSV-7c56798c-f7cd-37d3-8a67-ead57f36db31"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 30.74,
- "errQualifier": "sd",
- "errorValue": 15.48
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 60.99,
- "errQualifier": "sd",
- "errorValue": 10.36
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31.15,
- "errQualifier": "sd",
- "errorValue": 17.74
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 33.7,
- "errQualifier": "sd",
- "errorValue": 17.5
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 47.92,
- "errQualifier": "sd",
- "errorValue": 1.85
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31.03,
- "errQualifier": "sd",
- "errorValue": 17.44
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 47.92,
- "errQualifier": "sd",
- "errorValue": 23.31
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 64.65,
- "errQualifier": "sd",
- "errorValue": 19.58
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-cf5391cc-0770-31c6-ba97-2d2640605ae6.json b/test/data/enm/study-FCSV-cf5391cc-0770-31c6-ba97-2d2640605ae6.json
deleted file mode 100644
index b408508..0000000
--- a/test/data/enm/study-FCSV-cf5391cc-0770-31c6-ba97-2d2640605ae6.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-cf5391cc-0770-31c6-ba97-2d2640605ae6",
- "owner": {
- "substance": {
- "uuid": "FCSV-ae94c9b5-ffeb-3b3b-8464-1dfe3dbde073"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 18.65,
- "errQualifier": "sd",
- "errorValue": 0.55
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 54.03,
- "errQualifier": "sd",
- "errorValue": 3.34
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 19.47,
- "errQualifier": "sd",
- "errorValue": 3.23
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 38.58,
- "errQualifier": "sd",
- "errorValue": 8.58
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 28.3,
- "errQualifier": "sd",
- "errorValue": 2.03
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 32.35,
- "errQualifier": "sd",
- "errorValue": 9.29
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 28.3,
- "errQualifier": "sd",
- "errorValue": 11.7
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 64.47,
- "errQualifier": "sd",
- "errorValue": 4.93
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-cfae88bf-ecc5-3887-b46a-00930c485f65.json b/test/data/enm/study-FCSV-cfae88bf-ecc5-3887-b46a-00930c485f65.json
deleted file mode 100644
index babc2a8..0000000
--- a/test/data/enm/study-FCSV-cfae88bf-ecc5-3887-b46a-00930c485f65.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-cfae88bf-ecc5-3887-b46a-00930c485f65",
- "owner": {
- "substance": {
- "uuid": "FCSV-9e599ca9-9a8f-3094-a97b-3fb35b08a82a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 38.4,
- "errQualifier": "sd",
- "errorValue": 2.5
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 10.5
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 108
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-cfb90d7d-f85c-30c2-b145-3da71fac2910.json b/test/data/enm/study-FCSV-cfb90d7d-f85c-30c2-b145-3da71fac2910.json
deleted file mode 100644
index 175ca4e..0000000
--- a/test/data/enm/study-FCSV-cfb90d7d-f85c-30c2-b145-3da71fac2910.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-cfb90d7d-f85c-30c2-b145-3da71fac2910",
- "owner": {
- "substance": {
- "uuid": "FCSV-c975883b-640e-38a6-aabe-7596e3abcd95"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 237.624,
- "errQualifier": "sd",
- "errorValue": 14.168
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.058
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d096aebe-20b3-3d1e-84bf-ef4112f1c60e.json b/test/data/enm/study-FCSV-d096aebe-20b3-3d1e-84bf-ef4112f1c60e.json
deleted file mode 100644
index f9beea1..0000000
--- a/test/data/enm/study-FCSV-d096aebe-20b3-3d1e-84bf-ef4112f1c60e.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-d096aebe-20b3-3d1e-84bf-ef4112f1c60e",
- "owner": {
- "substance": {
- "uuid": "FCSV-6b272721-ed04-31bd-a4d4-cb6496140e85"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 42.9,
- "errQualifier": "sd",
- "errorValue": 2.72
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 50.05,
- "errQualifier": "sd",
- "errorValue": 2.99
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 41.71,
- "errQualifier": "sd",
- "errorValue": 1.12
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 15.44,
- "errQualifier": "sd",
- "errorValue": 2.54
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 44.73,
- "errQualifier": "sd",
- "errorValue": 2.03
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 13.15,
- "errQualifier": "sd",
- "errorValue": 2.5
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 44.73,
- "errQualifier": "sd",
- "errorValue": 3.37
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 65.41,
- "errQualifier": "sd",
- "errorValue": 3.19
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d0f53f59-07c3-335a-8a12-85e6afd74d18.json b/test/data/enm/study-FCSV-d0f53f59-07c3-335a-8a12-85e6afd74d18.json
deleted file mode 100644
index 21bcbdd..0000000
--- a/test/data/enm/study-FCSV-d0f53f59-07c3-335a-8a12-85e6afd74d18.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-d0f53f59-07c3-335a-8a12-85e6afd74d18",
- "owner": {
- "substance": {
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- "code": "PC_GRANULOMETRY_SECTION",
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- },
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diff --git a/test/data/enm/study-FCSV-d0f73aac-eea4-3727-9b27-dda1a3aa4903.json b/test/data/enm/study-FCSV-d0f73aac-eea4-3727-9b27-dda1a3aa4903.json
deleted file mode 100644
index 43e3c5d..0000000
--- a/test/data/enm/study-FCSV-d0f73aac-eea4-3727-9b27-dda1a3aa4903.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-d0f73aac-eea4-3727-9b27-dda1a3aa4903",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- },
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- "year": "2014",
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- },
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- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
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- "result": {
- "unit": "nm",
- "loValue": 113.66,
- "errQualifier": "sd",
- "errorValue": 118.06
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- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
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- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
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- "result": {
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- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
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- "MEDIUM": "Human serum (Sigma #H4522)",
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "errorValue": 0.7
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- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
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- "result": {
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- "errQualifier": "sd",
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- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
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- "result": {
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diff --git a/test/data/enm/study-FCSV-d127072e-740f-3751-865a-5bc3c85663ca.json b/test/data/enm/study-FCSV-d127072e-740f-3751-865a-5bc3c85663ca.json
deleted file mode 100644
index 4e2242c..0000000
--- a/test/data/enm/study-FCSV-d127072e-740f-3751-865a-5bc3c85663ca.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-d127072e-740f-3751-865a-5bc3c85663ca",
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- "owner": null
- },
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- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
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- "endpoint": "DLS",
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- "effects": [
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- "pH": null
- },
- "result": {
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- "loQualifier": "mean",
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- "MEDIUM": "Human serum (Sigma #H4522)",
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diff --git a/test/data/enm/study-FCSV-d1351a90-3e8d-3f80-acbe-aea1d4155105.json b/test/data/enm/study-FCSV-d1351a90-3e8d-3f80-acbe-aea1d4155105.json
deleted file mode 100644
index 81b7d26..0000000
--- a/test/data/enm/study-FCSV-d1351a90-3e8d-3f80-acbe-aea1d4155105.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-d1351a90-3e8d-3f80-acbe-aea1d4155105",
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- },
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- "year": "2014",
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- "category": {
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- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
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- "parameters": {
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diff --git a/test/data/enm/study-FCSV-d1386a55-1179-3ecf-ba91-8a4145793e06.json b/test/data/enm/study-FCSV-d1386a55-1179-3ecf-ba91-8a4145793e06.json
deleted file mode 100644
index 977fa13..0000000
--- a/test/data/enm/study-FCSV-d1386a55-1179-3ecf-ba91-8a4145793e06.json
+++ /dev/null
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-{
- "uuid": "FCSV-d1386a55-1179-3ecf-ba91-8a4145793e06",
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- "result": {
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diff --git a/test/data/enm/study-FCSV-d14478f5-a012-32b5-bb6c-813ba90d38c8.json b/test/data/enm/study-FCSV-d14478f5-a012-32b5-bb6c-813ba90d38c8.json
deleted file mode 100644
index 98989d0..0000000
--- a/test/data/enm/study-FCSV-d14478f5-a012-32b5-bb6c-813ba90d38c8.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/study-FCSV-d146e10c-a0a5-3881-8c30-0d1c74059c2f.json b/test/data/enm/study-FCSV-d146e10c-a0a5-3881-8c30-0d1c74059c2f.json
deleted file mode 100644
index 8ec1487..0000000
--- a/test/data/enm/study-FCSV-d146e10c-a0a5-3881-8c30-0d1c74059c2f.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
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- "endpoint": "Bicinchoninic Acid (BCA) Assay",
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- "effects": [
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- "result": {
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diff --git a/test/data/enm/study-FCSV-d1aac751-f813-3858-8a4f-8f97ff74cddc.json b/test/data/enm/study-FCSV-d1aac751-f813-3858-8a4f-8f97ff74cddc.json
deleted file mode 100644
index 70a1279..0000000
--- a/test/data/enm/study-FCSV-d1aac751-f813-3858-8a4f-8f97ff74cddc.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-d1aac751-f813-3858-8a4f-8f97ff74cddc",
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- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Ag]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d1be8b96-c11e-355a-ab8a-c84aa4ee38ae.json b/test/data/enm/study-FCSV-d1be8b96-c11e-355a-ab8a-c84aa4ee38ae.json
deleted file mode 100644
index 94b9994..0000000
--- a/test/data/enm/study-FCSV-d1be8b96-c11e-355a-ab8a-c84aa4ee38ae.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-d1be8b96-c11e-355a-ab8a-c84aa4ee38ae",
- "owner": {
- "substance": {
- "uuid": "FCSV-74492618-7ff6-39c9-b396-8d7465109083"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 239.056,
- "errQualifier": "sd",
- "errorValue": 1.344
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.006
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d1fedfa2-4e8f-3674-8ae5-55028250eeeb.json b/test/data/enm/study-FCSV-d1fedfa2-4e8f-3674-8ae5-55028250eeeb.json
deleted file mode 100644
index 125907c..0000000
--- a/test/data/enm/study-FCSV-d1fedfa2-4e8f-3674-8ae5-55028250eeeb.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-d1fedfa2-4e8f-3674-8ae5-55028250eeeb",
- "owner": {
- "substance": {
- "uuid": "FCSV-9964d099-d8aa-3a89-863c-d69fc921bee2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 22.74,
- "errQualifier": "sd",
- "errorValue": 0.91
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 41.93,
- "errQualifier": "sd",
- "errorValue": 0.83
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 32.56,
- "errQualifier": "sd",
- "errorValue": 20.73
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 114.85,
- "errQualifier": "sd",
- "errorValue": 130.69
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 40.11,
- "errQualifier": "sd",
- "errorValue": 1.41
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 37.84,
- "errQualifier": "sd",
- "errorValue": 2.82
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 40.11,
- "errQualifier": "sd",
- "errorValue": 30.03
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 64.81,
- "errQualifier": "sd",
- "errorValue": 32.82
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d1ff9be7-4a0c-3cb0-b3aa-c7569c00d290.json b/test/data/enm/study-FCSV-d1ff9be7-4a0c-3cb0-b3aa-c7569c00d290.json
deleted file mode 100644
index bc96b11..0000000
--- a/test/data/enm/study-FCSV-d1ff9be7-4a0c-3cb0-b3aa-c7569c00d290.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-d1ff9be7-4a0c-3cb0-b3aa-c7569c00d290",
- "owner": {
- "substance": {
- "uuid": "FCSV-8dc5c24b-2e89-3833-b94d-920674a956a0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -21.13,
- "errQualifier": "sd",
- "errorValue": 1.84
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -8.35,
- "errQualifier": "sd",
- "errorValue": 2.31
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d24878e4-29cd-3f05-b2b9-bf4d2b5f64c4.json b/test/data/enm/study-FCSV-d24878e4-29cd-3f05-b2b9-bf4d2b5f64c4.json
deleted file mode 100644
index 8ebad34..0000000
--- a/test/data/enm/study-FCSV-d24878e4-29cd-3f05-b2b9-bf4d2b5f64c4.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-d24878e4-29cd-3f05-b2b9-bf4d2b5f64c4",
- "owner": {
- "substance": {
- "uuid": "FCSV-7c42c2b4-dcbe-39a4-ae4e-0f0c41a7a5a5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 3.541,
- "errQualifier": "sd",
- "errorValue": 1.291
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d24f57e9-c3f0-3fe4-88cd-8b7ff679539f.json b/test/data/enm/study-FCSV-d24f57e9-c3f0-3fe4-88cd-8b7ff679539f.json
deleted file mode 100644
index 9f7af69..0000000
--- a/test/data/enm/study-FCSV-d24f57e9-c3f0-3fe4-88cd-8b7ff679539f.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-d24f57e9-c3f0-3fe4-88cd-8b7ff679539f",
- "owner": {
- "substance": {
- "uuid": "FCSV-70406142-0fd6-30bd-873b-5cce39016ed5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -30.7,
- "errQualifier": "sd",
- "errorValue": 5.23
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -9.68,
- "errQualifier": "sd",
- "errorValue": 1.54
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d276ea4a-a7e8-34bd-818c-a91f3f5b3e54.json b/test/data/enm/study-FCSV-d276ea4a-a7e8-34bd-818c-a91f3f5b3e54.json
deleted file mode 100644
index 60a8477..0000000
--- a/test/data/enm/study-FCSV-d276ea4a-a7e8-34bd-818c-a91f3f5b3e54.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-d276ea4a-a7e8-34bd-818c-a91f3f5b3e54",
- "owner": {
- "substance": {
- "uuid": "FCSV-8a45dec8-a551-33cc-a7ac-7750d9f30389"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d2815d0a-c5cf-35db-a4aa-44305850d8d9.json b/test/data/enm/study-FCSV-d2815d0a-c5cf-35db-a4aa-44305850d8d9.json
deleted file mode 100644
index c1a0282..0000000
--- a/test/data/enm/study-FCSV-d2815d0a-c5cf-35db-a4aa-44305850d8d9.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-d2815d0a-c5cf-35db-a4aa-44305850d8d9",
- "owner": {
- "substance": {
- "uuid": "FCSV-5c14595c-0e23-3f37-aaad-9988eba09196"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 3.835,
- "errQualifier": "sd",
- "errorValue": 0.399
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d2c53ee8-4d19-3ccd-ae69-57611b2b2b30.json b/test/data/enm/study-FCSV-d2c53ee8-4d19-3ccd-ae69-57611b2b2b30.json
deleted file mode 100644
index f465347..0000000
--- a/test/data/enm/study-FCSV-d2c53ee8-4d19-3ccd-ae69-57611b2b2b30.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-d2c53ee8-4d19-3ccd-ae69-57611b2b2b30",
- "owner": {
- "substance": {
- "uuid": "FCSV-ff7e8515-cfad-3d76-a918-d6eeab10a91d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.507,
- "errQualifier": "sd",
- "errorValue": 0.059
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -0.98,
- "errQualifier": "std",
- "errorValue": 0.168
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d2cd2f10-7905-308e-a47f-8471a38cfed5.json b/test/data/enm/study-FCSV-d2cd2f10-7905-308e-a47f-8471a38cfed5.json
deleted file mode 100644
index ac65118..0000000
--- a/test/data/enm/study-FCSV-d2cd2f10-7905-308e-a47f-8471a38cfed5.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-d2cd2f10-7905-308e-a47f-8471a38cfed5",
- "owner": {
- "substance": {
- "uuid": "FCSV-6b272721-ed04-31bd-a4d4-cb6496140e85"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
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- },
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- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.058,
- "errQualifier": "sd",
- "errorValue": 0.03
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.282,
- "errQualifier": "sd",
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- }
- }
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diff --git a/test/data/enm/study-FCSV-d2ecb7cc-5af7-35b6-9c66-ecc065e7a838.json b/test/data/enm/study-FCSV-d2ecb7cc-5af7-35b6-9c66-ecc065e7a838.json
deleted file mode 100644
index a754181..0000000
--- a/test/data/enm/study-FCSV-d2ecb7cc-5af7-35b6-9c66-ecc065e7a838.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-d2ecb7cc-5af7-35b6-9c66-ecc065e7a838",
- "owner": {
- "substance": {
- "uuid": "FCSV-ae94c9b5-ffeb-3b3b-8464-1dfe3dbde073"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
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- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
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- },
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- "effects": [
- {
- "endpoint": "Spectral counts",
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- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d2f2b53f-f680-3583-833e-cf85631d5405.json b/test/data/enm/study-FCSV-d2f2b53f-f680-3583-833e-cf85631d5405.json
deleted file mode 100644
index af373d0..0000000
--- a/test/data/enm/study-FCSV-d2f2b53f-f680-3583-833e-cf85631d5405.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-d2f2b53f-f680-3583-833e-cf85631d5405",
- "owner": {
- "substance": {
- "uuid": "FCSV-2b9a077f-bef3-3ffd-a83a-77dd85db129a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 1.951,
- "errQualifier": "sd",
- "errorValue": 0.62
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d320e005-4c4f-37fe-8f44-4fddcad581db.json b/test/data/enm/study-FCSV-d320e005-4c4f-37fe-8f44-4fddcad581db.json
deleted file mode 100644
index fc49c28..0000000
--- a/test/data/enm/study-FCSV-d320e005-4c4f-37fe-8f44-4fddcad581db.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-d320e005-4c4f-37fe-8f44-4fddcad581db",
- "owner": {
- "substance": {
- "uuid": "FCSV-130b04ab-86e6-38d6-9276-e2db1b4dcffb"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.014,
- "errQualifier": "sd",
- "errorValue": 0.006
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -6.142,
- "errQualifier": "std",
- "errorValue": 0.594
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d32aed46-63be-33aa-a7e2-fd9669e77c83.json b/test/data/enm/study-FCSV-d32aed46-63be-33aa-a7e2-fd9669e77c83.json
deleted file mode 100644
index 18c165e..0000000
--- a/test/data/enm/study-FCSV-d32aed46-63be-33aa-a7e2-fd9669e77c83.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-d32aed46-63be-33aa-a7e2-fd9669e77c83",
- "owner": {
- "substance": {
- "uuid": "FCSV-7087aac7-6f1d-320f-bfde-5897fe91af64"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.018,
- "errQualifier": "sd",
- "errorValue": 0.011
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -5.778,
- "errQualifier": "std",
- "errorValue": 0.877
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d32db4b5-9c98-3364-9b68-8c0bed745c62.json b/test/data/enm/study-FCSV-d32db4b5-9c98-3364-9b68-8c0bed745c62.json
deleted file mode 100644
index d5e0567..0000000
--- a/test/data/enm/study-FCSV-d32db4b5-9c98-3364-9b68-8c0bed745c62.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-d32db4b5-9c98-3364-9b68-8c0bed745c62",
- "owner": {
- "substance": {
- "uuid": "FCSV-cb2f11a0-4af8-318b-8a60-3908f45c2e65"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
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- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": 18.93,
- "errQualifier": "sd",
- "errorValue": 6.2
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -5.52,
- "errQualifier": "sd",
- "errorValue": 2.15
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d34092b1-0537-3894-9033-7ef5da80a25e.json b/test/data/enm/study-FCSV-d34092b1-0537-3894-9033-7ef5da80a25e.json
deleted file mode 100644
index 2acf9e3..0000000
--- a/test/data/enm/study-FCSV-d34092b1-0537-3894-9033-7ef5da80a25e.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-d34092b1-0537-3894-9033-7ef5da80a25e",
- "owner": {
- "substance": {
- "uuid": "FCSV-ffe19c9e-b1a1-3f38-a149-0d587fc5b172"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
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- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 31.2,
- "errQualifier": "sd",
- "errorValue": 0.66
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 33.05,
- "errQualifier": "sd",
- "errorValue": 1.67
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
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- "Remark": null,
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- },
- "result": {
- "unit": "nm",
- "loValue": 31.84,
- "errQualifier": "sd",
- "errorValue": 0.66
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 53.41,
- "errQualifier": "sd",
- "errorValue": 18.99
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 33.38,
- "errQualifier": "sd",
- "errorValue": 0.7
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 30.48,
- "errQualifier": "sd",
- "errorValue": 0.14
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 33.38,
- "errQualifier": "sd",
- "errorValue": 0.6
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 57.18,
- "errQualifier": "sd",
- "errorValue": 21.12
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d3961157-296b-3d3c-aab5-7359514e2e6b.json b/test/data/enm/study-FCSV-d3961157-296b-3d3c-aab5-7359514e2e6b.json
deleted file mode 100644
index 41247e4..0000000
--- a/test/data/enm/study-FCSV-d3961157-296b-3d3c-aab5-7359514e2e6b.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-d3961157-296b-3d3c-aab5-7359514e2e6b",
- "owner": {
- "substance": {
- "uuid": "FCSV-3c5fb4b0-2e4e-3dae-9eb2-1dbfd202cd13"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.201,
- "errQualifier": "sd",
- "errorValue": 0.027
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.115,
- "errQualifier": "sd",
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- ]
-}
diff --git a/test/data/enm/study-FCSV-d41ab2a2-6f6f-3467-bf50-d21993550db6.json b/test/data/enm/study-FCSV-d41ab2a2-6f6f-3467-bf50-d21993550db6.json
deleted file mode 100644
index cec8868..0000000
--- a/test/data/enm/study-FCSV-d41ab2a2-6f6f-3467-bf50-d21993550db6.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-d41ab2a2-6f6f-3467-bf50-d21993550db6",
- "owner": {
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- "uuid": "FCSV-ee07f574-0b80-31db-b1f2-535f6d6626b0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "conditions": {
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 95.37,
- "errQualifier": "sd",
- "errorValue": 3.58
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 106.12,
- "errQualifier": "sd",
- "errorValue": 4.97
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
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- },
- "result": {
- "unit": "nm",
- "loValue": 94.5,
- "errQualifier": "sd",
- "errorValue": 8.07
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 102.13,
- "errQualifier": "sd",
- "errorValue": 3.94
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 98.7,
- "errQualifier": "sd",
- "errorValue": 4.96
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 91.66,
- "errQualifier": "sd",
- "errorValue": 2.12
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 98.7,
- "errQualifier": "sd",
- "errorValue": 5.82
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 108.76,
- "errQualifier": "sd",
- "errorValue": 5.51
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d458cfc0-a664-3a58-90d0-2795fb572312.json b/test/data/enm/study-FCSV-d458cfc0-a664-3a58-90d0-2795fb572312.json
deleted file mode 100644
index c8655c7..0000000
--- a/test/data/enm/study-FCSV-d458cfc0-a664-3a58-90d0-2795fb572312.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-d458cfc0-a664-3a58-90d0-2795fb572312",
- "owner": {
- "substance": {
- "uuid": "FCSV-6046fc9f-3c73-3215-97e2-4ddcf85f41da"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 688.476,
- "errQualifier": "sd",
- "errorValue": 50.036
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.006
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d471cef1-160a-3124-97da-301ada8a28d3.json b/test/data/enm/study-FCSV-d471cef1-160a-3124-97da-301ada8a28d3.json
deleted file mode 100644
index 6ff556a..0000000
--- a/test/data/enm/study-FCSV-d471cef1-160a-3124-97da-301ada8a28d3.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-d471cef1-160a-3124-97da-301ada8a28d3",
- "owner": {
- "substance": {
- "uuid": "FCSV-4026a85b-f254-3d35-bd77-c634d38e4a22"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d4ad6677-83ab-3aba-a2c1-61ef6aba6792.json b/test/data/enm/study-FCSV-d4ad6677-83ab-3aba-a2c1-61ef6aba6792.json
deleted file mode 100644
index 76b88f0..0000000
--- a/test/data/enm/study-FCSV-d4ad6677-83ab-3aba-a2c1-61ef6aba6792.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-d4ad6677-83ab-3aba-a2c1-61ef6aba6792",
- "owner": {
- "substance": {
- "uuid": "FCSV-064f1803-3b9e-3f44-a5f6-60b1f573830c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.436,
- "errQualifier": "sd",
- "errorValue": 0.471
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d4c6db0c-af68-306f-9153-f9c014fe14c3.json b/test/data/enm/study-FCSV-d4c6db0c-af68-306f-9153-f9c014fe14c3.json
deleted file mode 100644
index 247219f..0000000
--- a/test/data/enm/study-FCSV-d4c6db0c-af68-306f-9153-f9c014fe14c3.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-d4c6db0c-af68-306f-9153-f9c014fe14c3",
- "owner": {
- "substance": {
- "uuid": "FCSV-9cc7dd73-d27f-35a0-a3f1-81a18429b76a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.147,
- "errQualifier": "sd",
- "errorValue": 0.068
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.184,
- "errQualifier": "sd",
- "errorValue": 0.028
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d4e6efa1-d2ef-3197-9575-a29b10c88269.json b/test/data/enm/study-FCSV-d4e6efa1-d2ef-3197-9575-a29b10c88269.json
deleted file mode 100644
index 410c9f7..0000000
--- a/test/data/enm/study-FCSV-d4e6efa1-d2ef-3197-9575-a29b10c88269.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-d4e6efa1-d2ef-3197-9575-a29b10c88269",
- "owner": {
- "substance": {
- "uuid": "FCSV-9964d099-d8aa-3a89-863c-d69fc921bee2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d580ade9-9be8-378e-a75f-20e779c7de19.json b/test/data/enm/study-FCSV-d580ade9-9be8-378e-a75f-20e779c7de19.json
deleted file mode 100644
index da739e1..0000000
--- a/test/data/enm/study-FCSV-d580ade9-9be8-378e-a75f-20e779c7de19.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-d580ade9-9be8-378e-a75f-20e779c7de19",
- "owner": {
- "substance": {
- "uuid": "FCSV-3adf8c83-83b1-3ffa-8868-b8527d83923b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.498,
- "errQualifier": "sd",
- "errorValue": 0.119
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.651,
- "errQualifier": "sd",
- "errorValue": 0.047
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 528.02,
- "errQualifier": "sd",
- "errorValue": 1.41
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d5b393ff-93aa-3d51-8884-a16f03afefb0.json b/test/data/enm/study-FCSV-d5b393ff-93aa-3d51-8884-a16f03afefb0.json
deleted file mode 100644
index 01931bb..0000000
--- a/test/data/enm/study-FCSV-d5b393ff-93aa-3d51-8884-a16f03afefb0.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-d5b393ff-93aa-3d51-8884-a16f03afefb0",
- "owner": {
- "substance": {
- "uuid": "FCSV-06c1d24b-426b-39ec-8047-700808302325"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -33.48,
- "errQualifier": "sd",
- "errorValue": 0.04
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -8.81,
- "errQualifier": "sd",
- "errorValue": 1.23
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d5f75857-56e9-3e29-8fab-cce56494effd.json b/test/data/enm/study-FCSV-d5f75857-56e9-3e29-8fab-cce56494effd.json
deleted file mode 100644
index 2079400..0000000
--- a/test/data/enm/study-FCSV-d5f75857-56e9-3e29-8fab-cce56494effd.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-d5f75857-56e9-3e29-8fab-cce56494effd",
- "owner": {
- "substance": {
- "uuid": "FCSV-6d8b8701-7fca-3936-a45e-66c17012fc75"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -21.45,
- "errQualifier": "sd",
- "errorValue": 10.62
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -9.77,
- "errQualifier": "sd",
- "errorValue": 1.25
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d5f82e41-f127-38b4-baa7-f8ffa6ac5824.json b/test/data/enm/study-FCSV-d5f82e41-f127-38b4-baa7-f8ffa6ac5824.json
deleted file mode 100644
index f320df7..0000000
--- a/test/data/enm/study-FCSV-d5f82e41-f127-38b4-baa7-f8ffa6ac5824.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-d5f82e41-f127-38b4-baa7-f8ffa6ac5824",
- "owner": {
- "substance": {
- "uuid": "FCSV-4683cde2-ec2e-3a2e-974a-3ba15cd79d05"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.132,
- "errQualifier": "sd",
- "errorValue": 0.019
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -2.916,
- "errQualifier": "std",
- "errorValue": 0.209
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d6e973d8-90fa-347a-afd4-f796d4003e6a.json b/test/data/enm/study-FCSV-d6e973d8-90fa-347a-afd4-f796d4003e6a.json
deleted file mode 100644
index f906062..0000000
--- a/test/data/enm/study-FCSV-d6e973d8-90fa-347a-afd4-f796d4003e6a.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-d6e973d8-90fa-347a-afd4-f796d4003e6a",
- "owner": {
- "substance": {
- "uuid": "FCSV-7087aac7-6f1d-320f-bfde-5897fe91af64"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 266.518,
- "errQualifier": "sd",
- "errorValue": 7.118
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.033
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d6f8467c-a997-3595-96cd-affdb352245f.json b/test/data/enm/study-FCSV-d6f8467c-a997-3595-96cd-affdb352245f.json
deleted file mode 100644
index 4e82378..0000000
--- a/test/data/enm/study-FCSV-d6f8467c-a997-3595-96cd-affdb352245f.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-d6f8467c-a997-3595-96cd-affdb352245f",
- "owner": {
- "substance": {
- "uuid": "FCSV-50aee86c-a3a2-3c46-86bf-5ac25485fc13"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d6f87e4e-152e-332e-98dc-66f37af086fa.json b/test/data/enm/study-FCSV-d6f87e4e-152e-332e-98dc-66f37af086fa.json
deleted file mode 100644
index 49298c0..0000000
--- a/test/data/enm/study-FCSV-d6f87e4e-152e-332e-98dc-66f37af086fa.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-d6f87e4e-152e-332e-98dc-66f37af086fa",
- "owner": {
- "substance": {
- "uuid": "FCSV-9964d099-d8aa-3a89-863c-d69fc921bee2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d7038407-4445-3e9a-8d9b-22dfbdd6b998.json b/test/data/enm/study-FCSV-d7038407-4445-3e9a-8d9b-22dfbdd6b998.json
deleted file mode 100644
index 27861a3..0000000
--- a/test/data/enm/study-FCSV-d7038407-4445-3e9a-8d9b-22dfbdd6b998.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-d7038407-4445-3e9a-8d9b-22dfbdd6b998",
- "owner": {
- "substance": {
- "uuid": "FCSV-edc7f198-f391-328e-aa68-7d3f00b62af5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d76101c0-f4f9-3f5b-9752-37946b8cc962.json b/test/data/enm/study-FCSV-d76101c0-f4f9-3f5b-9752-37946b8cc962.json
deleted file mode 100644
index 319c513..0000000
--- a/test/data/enm/study-FCSV-d76101c0-f4f9-3f5b-9752-37946b8cc962.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-d76101c0-f4f9-3f5b-9752-37946b8cc962",
- "owner": {
- "substance": {
- "uuid": "FCSV-6405ef25-683e-3763-a4e3-f56eb93174e4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 239.381,
- "errQualifier": "sd",
- "errorValue": 16.632
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.044
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d7e266ac-6626-3d1b-8ec9-5d6fbb124577.json b/test/data/enm/study-FCSV-d7e266ac-6626-3d1b-8ec9-5d6fbb124577.json
deleted file mode 100644
index b0d9f8f..0000000
--- a/test/data/enm/study-FCSV-d7e266ac-6626-3d1b-8ec9-5d6fbb124577.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-d7e266ac-6626-3d1b-8ec9-5d6fbb124577",
- "owner": {
- "substance": {
- "uuid": "FCSV-2a853f39-424f-3a63-91f3-1300f85ebe73"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d85a8061-1a69-349a-b291-25ef8b321043.json b/test/data/enm/study-FCSV-d85a8061-1a69-349a-b291-25ef8b321043.json
deleted file mode 100644
index 9bc8ee2..0000000
--- a/test/data/enm/study-FCSV-d85a8061-1a69-349a-b291-25ef8b321043.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-d85a8061-1a69-349a-b291-25ef8b321043",
- "owner": {
- "substance": {
- "uuid": "FCSV-0fe5f223-9c02-363c-a23c-70f1f36ffbec"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.207,
- "errQualifier": "sd",
- "errorValue": 0.071
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.265,
- "errQualifier": "sd",
- "errorValue": 0.006
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 519.87,
- "errQualifier": "sd",
- "errorValue": 0.15
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d8743dde-a7e3-3e5b-85eb-b21da70c37c8.json b/test/data/enm/study-FCSV-d8743dde-a7e3-3e5b-85eb-b21da70c37c8.json
deleted file mode 100644
index d67f06c..0000000
--- a/test/data/enm/study-FCSV-d8743dde-a7e3-3e5b-85eb-b21da70c37c8.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-d8743dde-a7e3-3e5b-85eb-b21da70c37c8",
- "owner": {
- "substance": {
- "uuid": "FCSV-6aea0743-7abb-3448-85ce-961b67fca97f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.282,
- "errQualifier": "sd",
- "errorValue": 0.005
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.378,
- "errQualifier": "sd",
- "errorValue": 0.076
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 542.67,
- "errQualifier": "sd",
- "errorValue": 0.21
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d8b05422-362d-30bc-aa07-c48fcb3b23e4.json b/test/data/enm/study-FCSV-d8b05422-362d-30bc-aa07-c48fcb3b23e4.json
deleted file mode 100644
index 9bd75ac..0000000
--- a/test/data/enm/study-FCSV-d8b05422-362d-30bc-aa07-c48fcb3b23e4.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-d8b05422-362d-30bc-aa07-c48fcb3b23e4",
- "owner": {
- "substance": {
- "uuid": "FCSV-74492618-7ff6-39c9-b396-8d7465109083"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.08,
- "errQualifier": "sd",
- "errorValue": 0.102
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d8c65092-3340-3cdf-9dff-446f337f811b.json b/test/data/enm/study-FCSV-d8c65092-3340-3cdf-9dff-446f337f811b.json
deleted file mode 100644
index 0cfe63a..0000000
--- a/test/data/enm/study-FCSV-d8c65092-3340-3cdf-9dff-446f337f811b.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-d8c65092-3340-3cdf-9dff-446f337f811b",
- "owner": {
- "substance": {
- "uuid": "FCSV-43f0ea59-aa2f-31d8-8d87-19c95ec9be18"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 20.05,
- "errQualifier": "sd",
- "errorValue": 2.86
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 58.53,
- "errQualifier": "sd",
- "errorValue": 3.6
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 4.34,
- "errQualifier": "sd",
- "errorValue": 0.82
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 123.73,
- "errQualifier": "sd",
- "errorValue": 71.99
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31.64,
- "errQualifier": "sd",
- "errorValue": 0.85
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 38.72,
- "errQualifier": "sd",
- "errorValue": 7.14
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31.64,
- "errQualifier": "sd",
- "errorValue": 10.11
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 114.95,
- "errQualifier": "sd",
- "errorValue": 23.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d8c9c230-e6ef-3b50-afe8-0c7b5d5fd735.json b/test/data/enm/study-FCSV-d8c9c230-e6ef-3b50-afe8-0c7b5d5fd735.json
deleted file mode 100644
index c184569..0000000
--- a/test/data/enm/study-FCSV-d8c9c230-e6ef-3b50-afe8-0c7b5d5fd735.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-d8c9c230-e6ef-3b50-afe8-0c7b5d5fd735",
- "owner": {
- "substance": {
- "uuid": "FCSV-1f4a28c8-ecc6-342f-8cbf-1ed579dd34f4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 747.973,
- "errQualifier": "sd",
- "errorValue": 103.623
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 12,
- "errQualifier": "sd",
- "errorValue": 2
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.019
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d8dc0e19-1011-3405-81a4-cd7b79e4356e.json b/test/data/enm/study-FCSV-d8dc0e19-1011-3405-81a4-cd7b79e4356e.json
deleted file mode 100644
index 92643f3..0000000
--- a/test/data/enm/study-FCSV-d8dc0e19-1011-3405-81a4-cd7b79e4356e.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-d8dc0e19-1011-3405-81a4-cd7b79e4356e",
- "owner": {
- "substance": {
- "uuid": "FCSV-0588dd9b-6227-307f-9e6a-6b07d4717e8c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 261.392,
- "errQualifier": "sd",
- "errorValue": 6.832
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.043
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d8e4d507-da97-340c-9dfd-7af6c346f1f3.json b/test/data/enm/study-FCSV-d8e4d507-da97-340c-9dfd-7af6c346f1f3.json
deleted file mode 100644
index b3659ea..0000000
--- a/test/data/enm/study-FCSV-d8e4d507-da97-340c-9dfd-7af6c346f1f3.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-d8e4d507-da97-340c-9dfd-7af6c346f1f3",
- "owner": {
- "substance": {
- "uuid": "FCSV-06c1d24b-426b-39ec-8047-700808302325"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.05,
- "errQualifier": "sd",
- "errorValue": 0.039
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -4.326,
- "errQualifier": "std",
- "errorValue": 1.138
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d9158cde-064f-37e7-a005-176277a768df.json b/test/data/enm/study-FCSV-d9158cde-064f-37e7-a005-176277a768df.json
deleted file mode 100644
index 70e69dc..0000000
--- a/test/data/enm/study-FCSV-d9158cde-064f-37e7-a005-176277a768df.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-d9158cde-064f-37e7-a005-176277a768df",
- "owner": {
- "substance": {
- "uuid": "FCSV-9964d099-d8aa-3a89-863c-d69fc921bee2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d9d7b341-b818-3238-9309-960d01b03966.json b/test/data/enm/study-FCSV-d9d7b341-b818-3238-9309-960d01b03966.json
deleted file mode 100644
index 61ea536..0000000
--- a/test/data/enm/study-FCSV-d9d7b341-b818-3238-9309-960d01b03966.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-d9d7b341-b818-3238-9309-960d01b03966",
- "owner": {
- "substance": {
- "uuid": "FCSV-6d5b38c4-f57f-31de-b8b4-2719792f82f2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.017,
- "errQualifier": "sd",
- "errorValue": 0.003
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -5.862,
- "errQualifier": "std",
- "errorValue": 0.238
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-d9e8f8a4-6fff-356d-aed3-b65f55613092.json b/test/data/enm/study-FCSV-d9e8f8a4-6fff-356d-aed3-b65f55613092.json
deleted file mode 100644
index 1e1bf58..0000000
--- a/test/data/enm/study-FCSV-d9e8f8a4-6fff-356d-aed3-b65f55613092.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-d9e8f8a4-6fff-356d-aed3-b65f55613092",
- "owner": {
- "substance": {
- "uuid": "FCSV-6ed95128-c2b8-3cfe-a0b4-29d2b06c6bc6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 962.673,
- "errQualifier": "sd",
- "errorValue": 37.465
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.005
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-da294c31-42f8-3126-8a04-2bbe33d3023a.json b/test/data/enm/study-FCSV-da294c31-42f8-3126-8a04-2bbe33d3023a.json
deleted file mode 100644
index 7b02a45..0000000
--- a/test/data/enm/study-FCSV-da294c31-42f8-3126-8a04-2bbe33d3023a.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-da294c31-42f8-3126-8a04-2bbe33d3023a",
- "owner": {
- "substance": {
- "uuid": "FCSV-1c9a58a0-cd91-3636-8f7c-4fd886f8593a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-da758505-71ff-34f3-ac22-00c81604766f.json b/test/data/enm/study-FCSV-da758505-71ff-34f3-ac22-00c81604766f.json
deleted file mode 100644
index a8ce327..0000000
--- a/test/data/enm/study-FCSV-da758505-71ff-34f3-ac22-00c81604766f.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-da758505-71ff-34f3-ac22-00c81604766f",
- "owner": {
- "substance": {
- "uuid": "FCSV-e4b9ce55-bbeb-368b-a1d4-e591b7df742e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": 19.23,
- "errQualifier": "sd",
- "errorValue": 3.75
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -10.03,
- "errQualifier": "sd",
- "errorValue": 3.97
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-dab7e7c2-3025-36d1-9a97-046b4cbfe387.json b/test/data/enm/study-FCSV-dab7e7c2-3025-36d1-9a97-046b4cbfe387.json
deleted file mode 100644
index 97420da..0000000
--- a/test/data/enm/study-FCSV-dab7e7c2-3025-36d1-9a97-046b4cbfe387.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-dab7e7c2-3025-36d1-9a97-046b4cbfe387",
- "owner": {
- "substance": {
- "uuid": "FCSV-9294730f-3d55-36da-80b9-eb2df162e805"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 1.592,
- "errQualifier": "sd",
- "errorValue": 0.585
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-dad5bae8-5011-3abf-b912-65b618772efa.json b/test/data/enm/study-FCSV-dad5bae8-5011-3abf-b912-65b618772efa.json
deleted file mode 100644
index ef60c4d..0000000
--- a/test/data/enm/study-FCSV-dad5bae8-5011-3abf-b912-65b618772efa.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-dad5bae8-5011-3abf-b912-65b618772efa",
- "owner": {
- "substance": {
- "uuid": "FCSV-6aea0743-7abb-3448-85ce-961b67fca97f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 2.274,
- "errQualifier": "sd",
- "errorValue": 0.507
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-daf67929-3542-3460-91d4-c0f9658c20b4.json b/test/data/enm/study-FCSV-daf67929-3542-3460-91d4-c0f9658c20b4.json
deleted file mode 100644
index fee32e4..0000000
--- a/test/data/enm/study-FCSV-daf67929-3542-3460-91d4-c0f9658c20b4.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-daf67929-3542-3460-91d4-c0f9658c20b4",
- "owner": {
- "substance": {
- "uuid": "FCSV-4dd1bf89-e885-3128-abe2-9a87fbbd0242"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 75.6,
- "errQualifier": "sd",
- "errorValue": 1.1
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 53.41,
- "errQualifier": "sd",
- "errorValue": 46.28
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 68.01,
- "errQualifier": "sd",
- "errorValue": 8.74
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 40.19,
- "errQualifier": "sd",
- "errorValue": 37.71
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 80.93,
- "errQualifier": "sd",
- "errorValue": 10.69
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 33.97,
- "errQualifier": "sd",
- "errorValue": 33.7
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 80.93,
- "errQualifier": "sd",
- "errorValue": 1.07
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 57.9,
- "errQualifier": "sd",
- "errorValue": 50.14
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-db1fd657-5fb0-35b1-b078-f251570b80f7.json b/test/data/enm/study-FCSV-db1fd657-5fb0-35b1-b078-f251570b80f7.json
deleted file mode 100644
index 367c84e..0000000
--- a/test/data/enm/study-FCSV-db1fd657-5fb0-35b1-b078-f251570b80f7.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-db1fd657-5fb0-35b1-b078-f251570b80f7",
- "owner": {
- "substance": {
- "uuid": "FCSV-ae94c9b5-ffeb-3b3b-8464-1dfe3dbde073"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 5.488,
- "errQualifier": "sd",
- "errorValue": 0.427
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-dbca7df2-2667-3094-a537-012c87f7c2a8.json b/test/data/enm/study-FCSV-dbca7df2-2667-3094-a537-012c87f7c2a8.json
deleted file mode 100644
index 10d0259..0000000
--- a/test/data/enm/study-FCSV-dbca7df2-2667-3094-a537-012c87f7c2a8.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-dbca7df2-2667-3094-a537-012c87f7c2a8",
- "owner": {
- "substance": {
- "uuid": "FCSV-3adf8c83-83b1-3ffa-8868-b8527d83923b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-dd5498ba-7787-3b4a-b5c3-358f78c7f7dc.json b/test/data/enm/study-FCSV-dd5498ba-7787-3b4a-b5c3-358f78c7f7dc.json
deleted file mode 100644
index 433a1e1..0000000
--- a/test/data/enm/study-FCSV-dd5498ba-7787-3b4a-b5c3-358f78c7f7dc.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-dd5498ba-7787-3b4a-b5c3-358f78c7f7dc",
- "owner": {
- "substance": {
- "uuid": "FCSV-b38f2b71-aa2d-3d72-af88-166a60bedee2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.216,
- "errQualifier": "sd",
- "errorValue": 0.032
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.197,
- "errQualifier": "sd",
- "errorValue": 0.015
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diff --git a/test/data/enm/study-FCSV-dd6c41c4-5b7c-3bdf-b0e9-8e15b77b2dce.json b/test/data/enm/study-FCSV-dd6c41c4-5b7c-3bdf-b0e9-8e15b77b2dce.json
deleted file mode 100644
index 999c7e9..0000000
--- a/test/data/enm/study-FCSV-dd6c41c4-5b7c-3bdf-b0e9-8e15b77b2dce.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-dd6c41c4-5b7c-3bdf-b0e9-8e15b77b2dce",
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
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- "errQualifier": "sd",
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- {
- "endpoint": "Log2 transformed",
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- "loQualifier": "mean",
- "loValue": -2.043,
- "errQualifier": "std",
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diff --git a/test/data/enm/study-FCSV-dd97debf-b900-39c3-9032-57bff884d762.json b/test/data/enm/study-FCSV-dd97debf-b900-39c3-9032-57bff884d762.json
deleted file mode 100644
index 4dd417b..0000000
--- a/test/data/enm/study-FCSV-dd97debf-b900-39c3-9032-57bff884d762.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
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- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
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- "result": {
- "unit": null,
- "textValue": "1-Dodecanethiol"
- }
- },
- {
- "endpoint": "FUNCTIONAL GROUP",
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- "COATING_DESCRIPTION": null,
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- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "1,2-dioleoyl-3-trimethylammonium-propane"
- }
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diff --git a/test/data/enm/study-FCSV-dde1271e-4034-3c9c-88b1-fd9eada86b93.json b/test/data/enm/study-FCSV-dde1271e-4034-3c9c-88b1-fd9eada86b93.json
deleted file mode 100644
index 0a68292..0000000
--- a/test/data/enm/study-FCSV-dde1271e-4034-3c9c-88b1-fd9eada86b93.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
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- "year": "2014",
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- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
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- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
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- "reliability": {
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- "effects": [
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- "endpoint": "Spectral counts",
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-de1a44e3-f832-39e6-9e8e-b00f7c6b74fd.json b/test/data/enm/study-FCSV-de1a44e3-f832-39e6-9e8e-b00f7c6b74fd.json
deleted file mode 100644
index 003036e..0000000
--- a/test/data/enm/study-FCSV-de1a44e3-f832-39e6-9e8e-b00f7c6b74fd.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-de1a44e3-f832-39e6-9e8e-b00f7c6b74fd",
- "owner": {
- "substance": {
- "uuid": "FCSV-4dd1bf89-e885-3128-abe2-9a87fbbd0242"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": 22.78,
- "errQualifier": "sd",
- "errorValue": 3.88
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -5.43,
- "errQualifier": "sd",
- "errorValue": 4.73
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-de678e5c-2a47-3cf6-99ed-3c5e936cfb6a.json b/test/data/enm/study-FCSV-de678e5c-2a47-3cf6-99ed-3c5e936cfb6a.json
deleted file mode 100644
index bcc2617..0000000
--- a/test/data/enm/study-FCSV-de678e5c-2a47-3cf6-99ed-3c5e936cfb6a.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-de678e5c-2a47-3cf6-99ed-3c5e936cfb6a",
- "owner": {
- "substance": {
- "uuid": "FCSV-ff7e8515-cfad-3d76-a918-d6eeab10a91d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-dea3be08-75cb-3c10-b445-c906715411b5.json b/test/data/enm/study-FCSV-dea3be08-75cb-3c10-b445-c906715411b5.json
deleted file mode 100644
index af1f5b6..0000000
--- a/test/data/enm/study-FCSV-dea3be08-75cb-3c10-b445-c906715411b5.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-dea3be08-75cb-3c10-b445-c906715411b5",
- "owner": {
- "substance": {
- "uuid": "FCSV-3c5fb4b0-2e4e-3dae-9eb2-1dbfd202cd13"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.01,
- "errQualifier": "sd",
- "errorValue": 0.008
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -6.611,
- "errQualifier": "std",
- "errorValue": 1.171
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ded39d52-c1ee-396a-83ce-97ce18551c1e.json b/test/data/enm/study-FCSV-ded39d52-c1ee-396a-83ce-97ce18551c1e.json
deleted file mode 100644
index b9bb284..0000000
--- a/test/data/enm/study-FCSV-ded39d52-c1ee-396a-83ce-97ce18551c1e.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-ded39d52-c1ee-396a-83ce-97ce18551c1e",
- "owner": {
- "substance": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.254,
- "errQualifier": "sd",
- "errorValue": 0.014
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.253,
- "errQualifier": "sd",
- "errorValue": 0.008
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 521.03,
- "errQualifier": "sd",
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- }
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- ]
-}
diff --git a/test/data/enm/study-FCSV-df20bc4f-07d8-3b02-96e9-2fef03b4ec6e.json b/test/data/enm/study-FCSV-df20bc4f-07d8-3b02-96e9-2fef03b4ec6e.json
deleted file mode 100644
index 0edd9b3..0000000
--- a/test/data/enm/study-FCSV-df20bc4f-07d8-3b02-96e9-2fef03b4ec6e.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-df20bc4f-07d8-3b02-96e9-2fef03b4ec6e",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
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- "doi: 10.1021/nn406018q"
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- "parameters": {
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- "Type of method": "ICP-AES",
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- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "effects": [
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- "endpoint": "Net cell association",
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- "Cell": "A549"
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- "result": {
- "unit": "mL/ug(Mg)",
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- "errQualifier": "sd",
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- {
- "endpoint": "Log2 transformed",
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- "loQualifier": "mean",
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diff --git a/test/data/enm/study-FCSV-df2955a3-9b7c-38ca-b5da-4ff12d824f64.json b/test/data/enm/study-FCSV-df2955a3-9b7c-38ca-b5da-4ff12d824f64.json
deleted file mode 100644
index 000b549..0000000
--- a/test/data/enm/study-FCSV-df2955a3-9b7c-38ca-b5da-4ff12d824f64.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
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- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
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- "TYPE": {
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- "loValue": "FUNCTIONALIZATION"
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- "result": {
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- "textValue": "N-Acetyl-L-cysteine"
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diff --git a/test/data/enm/study-FCSV-df4b175c-514d-35e0-b592-3e77d5b15c97.json b/test/data/enm/study-FCSV-df4b175c-514d-35e0-b592-3e77d5b15c97.json
deleted file mode 100644
index c303e13..0000000
--- a/test/data/enm/study-FCSV-df4b175c-514d-35e0-b592-3e77d5b15c97.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-df4b175c-514d-35e0-b592-3e77d5b15c97",
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- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
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- "endpoint": "Solution-based digestion protocol for serum protein isolates",
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- "doi: 10.1021/nn406018q"
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- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
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- "effects": [
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- "endpoint": "Spectral counts",
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- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-df54e7ee-8b9d-3562-9043-8a5f05806361.json b/test/data/enm/study-FCSV-df54e7ee-8b9d-3562-9043-8a5f05806361.json
deleted file mode 100644
index e5774ff..0000000
--- a/test/data/enm/study-FCSV-df54e7ee-8b9d-3562-9043-8a5f05806361.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-df54e7ee-8b9d-3562-9043-8a5f05806361",
- "owner": {
- "substance": {
- "uuid": "FCSV-8619e6db-2c01-389e-b05b-e75273d18359"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.7,
- "errQualifier": "sd",
- "errorValue": 0.296
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
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diff --git a/test/data/enm/study-FCSV-df55da6c-2b4c-3f1f-98b7-8edf27c2a8ab.json b/test/data/enm/study-FCSV-df55da6c-2b4c-3f1f-98b7-8edf27c2a8ab.json
deleted file mode 100644
index b6f41d7..0000000
--- a/test/data/enm/study-FCSV-df55da6c-2b4c-3f1f-98b7-8edf27c2a8ab.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
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diff --git a/test/data/enm/study-FCSV-df6e5051-0385-3760-9206-8108f9420cc8.json b/test/data/enm/study-FCSV-df6e5051-0385-3760-9206-8108f9420cc8.json
deleted file mode 100644
index dddc2cd..0000000
--- a/test/data/enm/study-FCSV-df6e5051-0385-3760-9206-8108f9420cc8.json
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-{
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diff --git a/test/data/enm/study-FCSV-df81134b-f33f-3a8c-b188-78d518a69a72.json b/test/data/enm/study-FCSV-df81134b-f33f-3a8c-b188-78d518a69a72.json
deleted file mode 100644
index 76ccfda..0000000
--- a/test/data/enm/study-FCSV-df81134b-f33f-3a8c-b188-78d518a69a72.json
+++ /dev/null
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-{
- "uuid": "FCSV-df81134b-f33f-3a8c-b188-78d518a69a72",
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deleted file mode 100644
index 002e8e0..0000000
--- a/test/data/enm/study-FCSV-dfe2382d-caa7-3a9f-a395-b1da0a8204f4.json
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diff --git a/test/data/enm/study-FCSV-e02c6059-2034-316a-9b86-f30d73861914.json b/test/data/enm/study-FCSV-e02c6059-2034-316a-9b86-f30d73861914.json
deleted file mode 100644
index 6199ef4..0000000
--- a/test/data/enm/study-FCSV-e02c6059-2034-316a-9b86-f30d73861914.json
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-{
- "uuid": "FCSV-e02c6059-2034-316a-9b86-f30d73861914",
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- "conditions": {
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- "result": {
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diff --git a/test/data/enm/study-FCSV-e087252d-2511-3ef4-b8eb-187c11460f3f.json b/test/data/enm/study-FCSV-e087252d-2511-3ef4-b8eb-187c11460f3f.json
deleted file mode 100644
index ea519ab..0000000
--- a/test/data/enm/study-FCSV-e087252d-2511-3ef4-b8eb-187c11460f3f.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/study-FCSV-e087cfc3-52a3-38a9-a2ca-1c9b2dbbb06f.json b/test/data/enm/study-FCSV-e087cfc3-52a3-38a9-a2ca-1c9b2dbbb06f.json
deleted file mode 100644
index 853c510..0000000
--- a/test/data/enm/study-FCSV-e087cfc3-52a3-38a9-a2ca-1c9b2dbbb06f.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/study-FCSV-e0c8d110-3cb0-33a6-b319-3b2ac6d4b705.json b/test/data/enm/study-FCSV-e0c8d110-3cb0-33a6-b319-3b2ac6d4b705.json
deleted file mode 100644
index d3fdd94..0000000
--- a/test/data/enm/study-FCSV-e0c8d110-3cb0-33a6-b319-3b2ac6d4b705.json
+++ /dev/null
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-{
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- "doi: 10.1021/nn406018q"
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- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.276,
- "errQualifier": "sd",
- "errorValue": 0.002
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.534,
- "errQualifier": "sd",
- "errorValue": 0.147
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 543.47,
- "errQualifier": "sd",
- "errorValue": 0.21
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e0d66de3-cb23-3b51-b27a-54324d4fb98f.json b/test/data/enm/study-FCSV-e0d66de3-cb23-3b51-b27a-54324d4fb98f.json
deleted file mode 100644
index bd6d3f3..0000000
--- a/test/data/enm/study-FCSV-e0d66de3-cb23-3b51-b27a-54324d4fb98f.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-e0d66de3-cb23-3b51-b27a-54324d4fb98f",
- "owner": {
- "substance": {
- "uuid": "FCSV-2de5071e-596b-3507-84fc-f9ba470cbcbf"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 5.361,
- "errQualifier": "sd",
- "errorValue": 1.138
- }
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diff --git a/test/data/enm/study-FCSV-e0fdf31b-bf9e-3d9a-970f-1fb13ed9b963.json b/test/data/enm/study-FCSV-e0fdf31b-bf9e-3d9a-970f-1fb13ed9b963.json
deleted file mode 100644
index b813e4f..0000000
--- a/test/data/enm/study-FCSV-e0fdf31b-bf9e-3d9a-970f-1fb13ed9b963.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-e0fdf31b-bf9e-3d9a-970f-1fb13ed9b963",
- "owner": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
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- ]
- },
- "parameters": {
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- "testmat_form": null
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- "reliability": {
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- },
- "effects": [
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- "endpoint": "Autot (ICP-AES)",
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- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
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- "loQualifier": "mean",
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- {
- "endpoint": "Total surface area (SAtot)",
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- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
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- "loValue": 11,
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- }
- },
- {
- "endpoint": "Protein density",
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- "MEDIUM": "Human serum (Sigma #H4522)"
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- "result": {
- "unit": "ug/cm^2",
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diff --git a/test/data/enm/study-FCSV-e10ee022-607a-3de1-a09f-27b86e2c965c.json b/test/data/enm/study-FCSV-e10ee022-607a-3de1-a09f-27b86e2c965c.json
deleted file mode 100644
index 41dee21..0000000
--- a/test/data/enm/study-FCSV-e10ee022-607a-3de1-a09f-27b86e2c965c.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-e10ee022-607a-3de1-a09f-27b86e2c965c",
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- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
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- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
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- "reliability": {
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- "effects": [
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- "endpoint": "ZETA POTENTIAL",
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- },
- "result": {
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diff --git a/test/data/enm/study-FCSV-e139a372-bb63-32da-bb83-6f6aa453c3d8.json b/test/data/enm/study-FCSV-e139a372-bb63-32da-bb83-6f6aa453c3d8.json
deleted file mode 100644
index c9bc8b3..0000000
--- a/test/data/enm/study-FCSV-e139a372-bb63-32da-bb83-6f6aa453c3d8.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-e139a372-bb63-32da-bb83-6f6aa453c3d8",
- "owner": {
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- "uuid": "FCSV-47e98c51-7508-362f-84d3-494bb124b849"
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- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
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- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
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- },
- "effects": [
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- "endpoint": "Spectral counts",
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- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e163d83f-1d6e-3b22-95b1-15f94c23f4aa.json b/test/data/enm/study-FCSV-e163d83f-1d6e-3b22-95b1-15f94c23f4aa.json
deleted file mode 100644
index 632af48..0000000
--- a/test/data/enm/study-FCSV-e163d83f-1d6e-3b22-95b1-15f94c23f4aa.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-e163d83f-1d6e-3b22-95b1-15f94c23f4aa",
- "owner": {
- "substance": {
- "uuid": "FCSV-2de5071e-596b-3507-84fc-f9ba470cbcbf"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e1683cee-61fa-3cd2-a5a6-4ac763a1533d.json b/test/data/enm/study-FCSV-e1683cee-61fa-3cd2-a5a6-4ac763a1533d.json
deleted file mode 100644
index 3fd4478..0000000
--- a/test/data/enm/study-FCSV-e1683cee-61fa-3cd2-a5a6-4ac763a1533d.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-e1683cee-61fa-3cd2-a5a6-4ac763a1533d",
- "owner": {
- "substance": {
- "uuid": "FCSV-6d5b38c4-f57f-31de-b8b4-2719792f82f2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.326,
- "errQualifier": "sd",
- "errorValue": 0.078
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.366,
- "errQualifier": "sd",
- "errorValue": 0.007
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 518.9,
- "errQualifier": "sd",
- "errorValue": 1.04
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e19a3766-9961-3dae-961c-54bcbada12c1.json b/test/data/enm/study-FCSV-e19a3766-9961-3dae-961c-54bcbada12c1.json
deleted file mode 100644
index 174334f..0000000
--- a/test/data/enm/study-FCSV-e19a3766-9961-3dae-961c-54bcbada12c1.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-e19a3766-9961-3dae-961c-54bcbada12c1",
- "owner": {
- "substance": {
- "uuid": "FCSV-ef28f16c-6ab1-3d8b-b971-37c08688701f"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.568,
- "errQualifier": "sd",
- "errorValue": 0.437
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e1aa918e-77e7-38e6-a95b-7babc9fc2093.json b/test/data/enm/study-FCSV-e1aa918e-77e7-38e6-a95b-7babc9fc2093.json
deleted file mode 100644
index a2cfd5f..0000000
--- a/test/data/enm/study-FCSV-e1aa918e-77e7-38e6-a95b-7babc9fc2093.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-e1aa918e-77e7-38e6-a95b-7babc9fc2093",
- "owner": {
- "substance": {
- "uuid": "FCSV-4026a85b-f254-3d35-bd77-c634d38e4a22"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 29.87,
- "errQualifier": "sd",
- "errorValue": 13.95
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 67.7,
- "errQualifier": "sd",
- "errorValue": 4.57
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 32.13,
- "errQualifier": "sd",
- "errorValue": 22.42
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 25.71,
- "errQualifier": "sd",
- "errorValue": 8.68
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 55.65,
- "errQualifier": "sd",
- "errorValue": 1.56
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20.54,
- "errQualifier": "sd",
- "errorValue": 6.06
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 55.65,
- "errQualifier": "sd",
- "errorValue": 31.99
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 84.29,
- "errQualifier": "sd",
- "errorValue": 3.12
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e1bf8278-a84e-3f14-a0e6-ac52d2086e90.json b/test/data/enm/study-FCSV-e1bf8278-a84e-3f14-a0e6-ac52d2086e90.json
deleted file mode 100644
index 2285869..0000000
--- a/test/data/enm/study-FCSV-e1bf8278-a84e-3f14-a0e6-ac52d2086e90.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-e1bf8278-a84e-3f14-a0e6-ac52d2086e90",
- "owner": {
- "substance": {
- "uuid": "FCSV-cb2f11a0-4af8-318b-8a60-3908f45c2e65"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.249,
- "errQualifier": "sd",
- "errorValue": 0.008
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.343,
- "errQualifier": "sd",
- "errorValue": 0.023
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 525.63,
- "errQualifier": "sd",
- "errorValue": 0.12
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e1e099b5-a15b-3788-ad63-49c687c75547.json b/test/data/enm/study-FCSV-e1e099b5-a15b-3788-ad63-49c687c75547.json
deleted file mode 100644
index 00dc8a9..0000000
--- a/test/data/enm/study-FCSV-e1e099b5-a15b-3788-ad63-49c687c75547.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-e1e099b5-a15b-3788-ad63-49c687c75547",
- "owner": {
- "substance": {
- "uuid": "FCSV-31bd6c7b-3247-3db9-93b6-59e0d3ecefa9"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "2-Mercaptoethanesulfonate"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e1e65abf-3026-31e8-8bf9-3afa8a4220e0.json b/test/data/enm/study-FCSV-e1e65abf-3026-31e8-8bf9-3afa8a4220e0.json
deleted file mode 100644
index f88f266..0000000
--- a/test/data/enm/study-FCSV-e1e65abf-3026-31e8-8bf9-3afa8a4220e0.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-e1e65abf-3026-31e8-8bf9-3afa8a4220e0",
- "owner": {
- "substance": {
- "uuid": "FCSV-4026a85b-f254-3d35-bd77-c634d38e4a22"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e279979f-a064-384e-bb64-2bb88ca883d9.json b/test/data/enm/study-FCSV-e279979f-a064-384e-bb64-2bb88ca883d9.json
deleted file mode 100644
index 23a72cd..0000000
--- a/test/data/enm/study-FCSV-e279979f-a064-384e-bb64-2bb88ca883d9.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-e279979f-a064-384e-bb64-2bb88ca883d9",
- "owner": {
- "substance": {
- "uuid": "FCSV-4dd1bf89-e885-3128-abe2-9a87fbbd0242"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.273,
- "errQualifier": "sd",
- "errorValue": 0.007
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.435,
- "errQualifier": "sd",
- "errorValue": 0.052
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 542,
- "errQualifier": "sd",
- "errorValue": 0.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e30c1169-808c-3bad-a229-875911f8ad16.json b/test/data/enm/study-FCSV-e30c1169-808c-3bad-a229-875911f8ad16.json
deleted file mode 100644
index 939a685..0000000
--- a/test/data/enm/study-FCSV-e30c1169-808c-3bad-a229-875911f8ad16.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-e30c1169-808c-3bad-a229-875911f8ad16",
- "owner": {
- "substance": {
- "uuid": "FCSV-7ad8c003-d0ee-3ea6-9374-b6e4d2f33401"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 1.085,
- "errQualifier": "sd",
- "errorValue": 0.642
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e326ad5a-c2f7-38be-8130-5de15d3f6699.json b/test/data/enm/study-FCSV-e326ad5a-c2f7-38be-8130-5de15d3f6699.json
deleted file mode 100644
index 19a76e6..0000000
--- a/test/data/enm/study-FCSV-e326ad5a-c2f7-38be-8130-5de15d3f6699.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-e326ad5a-c2f7-38be-8130-5de15d3f6699",
- "owner": {
- "substance": {
- "uuid": "FCSV-8b5b62c3-7fd2-3bba-b293-b7537e4971b1"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 75.37,
- "errQualifier": "sd",
- "errorValue": 3.5
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 93.52,
- "errQualifier": "sd",
- "errorValue": 1.01
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 75.26,
- "errQualifier": "sd",
- "errorValue": 4.54
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 89.71,
- "errQualifier": "sd",
- "errorValue": 1.87
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 79.04,
- "errQualifier": "sd",
- "errorValue": 4.66
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 84.48,
- "errQualifier": "sd",
- "errorValue": 2.36
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 79.04,
- "errQualifier": "sd",
- "errorValue": 4.17
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 95.2,
- "errQualifier": "sd",
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- }
- }
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-}
diff --git a/test/data/enm/study-FCSV-e339ae7e-feaf-30ab-8214-af9adb52e835.json b/test/data/enm/study-FCSV-e339ae7e-feaf-30ab-8214-af9adb52e835.json
deleted file mode 100644
index 7c4057b..0000000
--- a/test/data/enm/study-FCSV-e339ae7e-feaf-30ab-8214-af9adb52e835.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-e339ae7e-feaf-30ab-8214-af9adb52e835",
- "owner": {
- "substance": {
- "uuid": "FCSV-6b272721-ed04-31bd-a4d4-cb6496140e85"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e34eb9a1-fc40-3126-b05b-c88d9ea0b7d2.json b/test/data/enm/study-FCSV-e34eb9a1-fc40-3126-b05b-c88d9ea0b7d2.json
deleted file mode 100644
index 8510838..0000000
--- a/test/data/enm/study-FCSV-e34eb9a1-fc40-3126-b05b-c88d9ea0b7d2.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-e34eb9a1-fc40-3126-b05b-c88d9ea0b7d2",
- "owner": {
- "substance": {
- "uuid": "FCSV-7c42c2b4-dcbe-39a4-ae4e-0f0c41a7a5a5"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e35304f2-bab5-307c-a2b7-3526a1c01213.json b/test/data/enm/study-FCSV-e35304f2-bab5-307c-a2b7-3526a1c01213.json
deleted file mode 100644
index 541365d..0000000
--- a/test/data/enm/study-FCSV-e35304f2-bab5-307c-a2b7-3526a1c01213.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-e35304f2-bab5-307c-a2b7-3526a1c01213",
- "owner": {
- "substance": {
- "uuid": "FCSV-ed95bb69-9fa7-3a4a-b4a4-32dd947d4d1a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.25,
- "errQualifier": "sd",
- "errorValue": 0.059
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.419,
- "errQualifier": "sd",
- "errorValue": 0.017
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 521.84,
- "errQualifier": "sd",
- "errorValue": 0.26
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e4051f2e-a5be-3f3d-941c-b534f6c7e4fd.json b/test/data/enm/study-FCSV-e4051f2e-a5be-3f3d-941c-b534f6c7e4fd.json
deleted file mode 100644
index 755b753..0000000
--- a/test/data/enm/study-FCSV-e4051f2e-a5be-3f3d-941c-b534f6c7e4fd.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-e4051f2e-a5be-3f3d-941c-b534f6c7e4fd",
- "owner": {
- "substance": {
- "uuid": "FCSV-b228fc7b-c407-368a-bc1c-359c7375bb9b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.001,
- "errQualifier": "sd",
- "errorValue": 0.002
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -9.671,
- "errQualifier": "std",
- "errorValue": 2.499
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e4f80d25-1ca8-3c62-99ca-7601eb8db2cb.json b/test/data/enm/study-FCSV-e4f80d25-1ca8-3c62-99ca-7601eb8db2cb.json
deleted file mode 100644
index 2d0655d..0000000
--- a/test/data/enm/study-FCSV-e4f80d25-1ca8-3c62-99ca-7601eb8db2cb.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-e4f80d25-1ca8-3c62-99ca-7601eb8db2cb",
- "owner": {
- "substance": {
- "uuid": "FCSV-206b1a13-e02a-38a0-88ec-d5a8bfdabc55"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 34.96,
- "errQualifier": "sd",
- "errorValue": 2.24
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 44.75,
- "errQualifier": "sd",
- "errorValue": 12.66
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 96.53,
- "errQualifier": "sd",
- "errorValue": 111.18
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 29.93,
- "errQualifier": "sd",
- "errorValue": 1.71
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 65.69,
- "errQualifier": "sd",
- "errorValue": 1.24
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 25.8,
- "errQualifier": "sd",
- "errorValue": 0.7
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 65.69,
- "errQualifier": "sd",
- "errorValue": 52.04
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 64.33,
- "errQualifier": "sd",
- "errorValue": 21.27
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e5071ff9-35a7-3c23-bd2c-6c48072da49d.json b/test/data/enm/study-FCSV-e5071ff9-35a7-3c23-bd2c-6c48072da49d.json
deleted file mode 100644
index 7474019..0000000
--- a/test/data/enm/study-FCSV-e5071ff9-35a7-3c23-bd2c-6c48072da49d.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-e5071ff9-35a7-3c23-bd2c-6c48072da49d",
- "owner": {
- "substance": {
- "uuid": "FCSV-c2bce3a6-e09a-3fdc-a1f5-2281b22bb892"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.00045,
- "errQualifier": "sd",
- "errorValue": 0.00053
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -11.123,
- "errQualifier": "std",
- "errorValue": 1.696
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e584fefc-e12b-3c4a-90f4-c5e388c9b646.json b/test/data/enm/study-FCSV-e584fefc-e12b-3c4a-90f4-c5e388c9b646.json
deleted file mode 100644
index f5e8d7e..0000000
--- a/test/data/enm/study-FCSV-e584fefc-e12b-3c4a-90f4-c5e388c9b646.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-e584fefc-e12b-3c4a-90f4-c5e388c9b646",
- "owner": {
- "substance": {
- "uuid": "FCSV-4c523ea9-f3e8-32f4-9152-f73400aedb67"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.235,
- "errQualifier": "sd",
- "errorValue": 0.035
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.259,
- "errQualifier": "sd",
- "errorValue": 0.024
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 520.03,
- "errQualifier": "sd",
- "errorValue": 1.27
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e59c040d-e9d2-3fbd-a258-85d7f2f4834e.json b/test/data/enm/study-FCSV-e59c040d-e9d2-3fbd-a258-85d7f2f4834e.json
deleted file mode 100644
index 54aa2eb..0000000
--- a/test/data/enm/study-FCSV-e59c040d-e9d2-3fbd-a258-85d7f2f4834e.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-e59c040d-e9d2-3fbd-a258-85d7f2f4834e",
- "owner": {
- "substance": {
- "uuid": "FCSV-ccd3915e-0b1d-38f4-98b3-02b1a16aace7"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.31,
- "errQualifier": "sd",
- "errorValue": 0.065
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -1.691,
- "errQualifier": "std",
- "errorValue": 0.302
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e5b2fe0b-f166-3e71-8f59-277fb116c18a.json b/test/data/enm/study-FCSV-e5b2fe0b-f166-3e71-8f59-277fb116c18a.json
deleted file mode 100644
index 5b64f1b..0000000
--- a/test/data/enm/study-FCSV-e5b2fe0b-f166-3e71-8f59-277fb116c18a.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-e5b2fe0b-f166-3e71-8f59-277fb116c18a",
- "owner": {
- "substance": {
- "uuid": "FCSV-9df9ed76-5f94-3ecb-b661-a56e168a71bf"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e5b47b68-6418-3d77-9262-b2c83423985d.json b/test/data/enm/study-FCSV-e5b47b68-6418-3d77-9262-b2c83423985d.json
deleted file mode 100644
index 306de6f..0000000
--- a/test/data/enm/study-FCSV-e5b47b68-6418-3d77-9262-b2c83423985d.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-e5b47b68-6418-3d77-9262-b2c83423985d",
- "owner": {
- "substance": {
- "uuid": "FCSV-5c14595c-0e23-3f37-aaad-9988eba09196"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Thiolated L-threonine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e5d53a21-7973-3808-a71f-d583ff966da2.json b/test/data/enm/study-FCSV-e5d53a21-7973-3808-a71f-d583ff966da2.json
deleted file mode 100644
index faaa6da..0000000
--- a/test/data/enm/study-FCSV-e5d53a21-7973-3808-a71f-d583ff966da2.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-e5d53a21-7973-3808-a71f-d583ff966da2",
- "owner": {
- "substance": {
- "uuid": "FCSV-ff7d2c8c-3d2f-316a-b890-6f9e7d88df4c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.232,
- "errQualifier": "sd",
- "errorValue": 0.01
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.294,
- "errQualifier": "sd",
- "errorValue": 0.061
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 518.9,
- "errQualifier": "sd",
- "errorValue": 0.35
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e60c3939-0b0d-3a79-a095-cd17c0b1a1f3.json b/test/data/enm/study-FCSV-e60c3939-0b0d-3a79-a095-cd17c0b1a1f3.json
deleted file mode 100644
index 9581a07..0000000
--- a/test/data/enm/study-FCSV-e60c3939-0b0d-3a79-a095-cd17c0b1a1f3.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-e60c3939-0b0d-3a79-a095-cd17c0b1a1f3",
- "owner": {
- "substance": {
- "uuid": "FCSV-5b29295c-f2ab-3e5a-bb32-37caac38b002"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.02,
- "errQualifier": "sd",
- "errorValue": 0.004
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -5.676,
- "errQualifier": "std",
- "errorValue": 0.326
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e681bfc1-9fa1-383b-81f6-cb3b87f25cb4.json b/test/data/enm/study-FCSV-e681bfc1-9fa1-383b-81f6-cb3b87f25cb4.json
deleted file mode 100644
index eb7705a..0000000
--- a/test/data/enm/study-FCSV-e681bfc1-9fa1-383b-81f6-cb3b87f25cb4.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-e681bfc1-9fa1-383b-81f6-cb3b87f25cb4",
- "owner": {
- "substance": {
- "uuid": "FCSV-6b272721-ed04-31bd-a4d4-cb6496140e85"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.212,
- "errQualifier": "sd",
- "errorValue": 0.061
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.382,
- "errQualifier": "sd",
- "errorValue": 0.029
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 523.27,
- "errQualifier": "sd",
- "errorValue": 0.15
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e75b2536-884a-319d-93f8-3b9bc4c47c63.json b/test/data/enm/study-FCSV-e75b2536-884a-319d-93f8-3b9bc4c47c63.json
deleted file mode 100644
index 719dd31..0000000
--- a/test/data/enm/study-FCSV-e75b2536-884a-319d-93f8-3b9bc4c47c63.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-e75b2536-884a-319d-93f8-3b9bc4c47c63",
- "owner": {
- "substance": {
- "uuid": "FCSV-f3d54c07-7dd4-3124-b5bf-341eb9eb4e82"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": 16.35,
- "errQualifier": "sd",
- "errorValue": 2.26
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -7.95,
- "errQualifier": "sd",
- "errorValue": 1.16
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e7611960-09bf-3fdc-98c5-f773f4d71ad7.json b/test/data/enm/study-FCSV-e7611960-09bf-3fdc-98c5-f773f4d71ad7.json
deleted file mode 100644
index b26229a..0000000
--- a/test/data/enm/study-FCSV-e7611960-09bf-3fdc-98c5-f773f4d71ad7.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-e7611960-09bf-3fdc-98c5-f773f4d71ad7",
- "owner": {
- "substance": {
- "uuid": "FCSV-7c42c2b4-dcbe-39a4-ae4e-0f0c41a7a5a5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e76cba39-0623-3722-8b18-f65048858ef2.json b/test/data/enm/study-FCSV-e76cba39-0623-3722-8b18-f65048858ef2.json
deleted file mode 100644
index 7657662..0000000
--- a/test/data/enm/study-FCSV-e76cba39-0623-3722-8b18-f65048858ef2.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-e76cba39-0623-3722-8b18-f65048858ef2",
- "owner": {
- "substance": {
- "uuid": "FCSV-6d5b38c4-f57f-31de-b8b4-2719792f82f2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 15.6,
- "errQualifier": "sd",
- "errorValue": 1.43
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 59.7,
- "errQualifier": "sd",
- "errorValue": 9.77
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 2.75,
- "errQualifier": "sd",
- "errorValue": 0.93
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 69.66,
- "errQualifier": "sd",
- "errorValue": 62.47
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 35.99,
- "errQualifier": "sd",
- "errorValue": 0.75
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 17.68,
- "errQualifier": "sd",
- "errorValue": 6.07
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 35.99,
- "errQualifier": "sd",
- "errorValue": 7.94
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 105.1,
- "errQualifier": "sd",
- "errorValue": 38.29
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e7823c45-5d2e-31ec-9d26-a6c0847f9d7c.json b/test/data/enm/study-FCSV-e7823c45-5d2e-31ec-9d26-a6c0847f9d7c.json
deleted file mode 100644
index b3dd077..0000000
--- a/test/data/enm/study-FCSV-e7823c45-5d2e-31ec-9d26-a6c0847f9d7c.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-e7823c45-5d2e-31ec-9d26-a6c0847f9d7c",
- "owner": {
- "substance": {
- "uuid": "FCSV-9043e884-a5ba-3fa6-a103-dee0c7b1b3dd"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e7871bf5-2b01-30f7-9fd9-572515a34fac.json b/test/data/enm/study-FCSV-e7871bf5-2b01-30f7-9fd9-572515a34fac.json
deleted file mode 100644
index 7f1db85..0000000
--- a/test/data/enm/study-FCSV-e7871bf5-2b01-30f7-9fd9-572515a34fac.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-e7871bf5-2b01-30f7-9fd9-572515a34fac",
- "owner": {
- "substance": {
- "uuid": "FCSV-0d5c0fc7-de56-3507-b651-1c91bf030465"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 22.71,
- "errQualifier": "sd",
- "errorValue": 0.12
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 57.25,
- "errQualifier": "sd",
- "errorValue": 7.28
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 28.97,
- "errQualifier": "sd",
- "errorValue": 11.9
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 159.47,
- "errQualifier": "sd",
- "errorValue": 214.51
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 30.78,
- "errQualifier": "sd",
- "errorValue": 0.04
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 33.03,
- "errQualifier": "sd",
- "errorValue": 13.3
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 30.78,
- "errQualifier": "sd",
- "errorValue": 12.81
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 83.08,
- "errQualifier": "sd",
- "errorValue": 6.85
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e7972493-1040-372a-9786-2cd28899bde3.json b/test/data/enm/study-FCSV-e7972493-1040-372a-9786-2cd28899bde3.json
deleted file mode 100644
index f97f6dc..0000000
--- a/test/data/enm/study-FCSV-e7972493-1040-372a-9786-2cd28899bde3.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-e7972493-1040-372a-9786-2cd28899bde3",
- "owner": {
- "substance": {
- "uuid": "FCSV-bfa499a9-7d1a-34da-bccf-4fc30c65f03d"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.128,
- "errQualifier": "sd",
- "errorValue": 0.024
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.118,
- "errQualifier": "sd",
- "errorValue": 0.018
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e7bb66a7-d701-3f0a-8b7b-1bd85346ef10.json b/test/data/enm/study-FCSV-e7bb66a7-d701-3f0a-8b7b-1bd85346ef10.json
deleted file mode 100644
index d2eebe5..0000000
--- a/test/data/enm/study-FCSV-e7bb66a7-d701-3f0a-8b7b-1bd85346ef10.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-e7bb66a7-d701-3f0a-8b7b-1bd85346ef10",
- "owner": {
- "substance": {
- "uuid": "FCSV-ffe19c9e-b1a1-3f38-a149-0d587fc5b172"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.013,
- "errQualifier": "sd",
- "errorValue": 0.096
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e7d2cf35-b34a-3a13-8dbc-bc7e40b1ac2d.json b/test/data/enm/study-FCSV-e7d2cf35-b34a-3a13-8dbc-bc7e40b1ac2d.json
deleted file mode 100644
index 447b1f0..0000000
--- a/test/data/enm/study-FCSV-e7d2cf35-b34a-3a13-8dbc-bc7e40b1ac2d.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-e7d2cf35-b34a-3a13-8dbc-bc7e40b1ac2d",
- "owner": {
- "substance": {
- "uuid": "FCSV-6405ef25-683e-3763-a4e3-f56eb93174e4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "2-Naphthalenethiol"
- }
- },
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "(4'-aminoacetophenone)-modified poly(styrene-co-maleic anhydride)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e7ded596-b99d-37dc-975d-2d9d35bac338.json b/test/data/enm/study-FCSV-e7ded596-b99d-37dc-975d-2d9d35bac338.json
deleted file mode 100644
index 7baa59b..0000000
--- a/test/data/enm/study-FCSV-e7ded596-b99d-37dc-975d-2d9d35bac338.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-e7ded596-b99d-37dc-975d-2d9d35bac338",
- "owner": {
- "substance": {
- "uuid": "FCSV-770a2d39-1509-3c93-b28f-1d3e345de450"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 39.24,
- "errQualifier": "sd",
- "errorValue": 1.68
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 39.99,
- "errQualifier": "sd",
- "errorValue": 2.29
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 38.68,
- "errQualifier": "sd",
- "errorValue": 2.18
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 39.88,
- "errQualifier": "sd",
- "errorValue": 1.69
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 42.28,
- "errQualifier": "sd",
- "errorValue": 3.27
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 37.82,
- "errQualifier": "sd",
- "errorValue": 1.86
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 42.28,
- "errQualifier": "sd",
- "errorValue": 0.85
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 42.65,
- "errQualifier": "sd",
- "errorValue": 1.82
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e7ef4a21-1bde-3010-aa12-a018d911cc4f.json b/test/data/enm/study-FCSV-e7ef4a21-1bde-3010-aa12-a018d911cc4f.json
deleted file mode 100644
index efd4d87..0000000
--- a/test/data/enm/study-FCSV-e7ef4a21-1bde-3010-aa12-a018d911cc4f.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-e7ef4a21-1bde-3010-aa12-a018d911cc4f",
- "owner": {
- "substance": {
- "uuid": "FCSV-9c9a7234-a74f-326f-a134-79e004c1f687"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 38.4,
- "errQualifier": "sd",
- "errorValue": 2.5
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 10.5
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 108
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e81d3b28-8a8e-372b-9b53-9196ea67df2f.json b/test/data/enm/study-FCSV-e81d3b28-8a8e-372b-9b53-9196ea67df2f.json
deleted file mode 100644
index a371ca5..0000000
--- a/test/data/enm/study-FCSV-e81d3b28-8a8e-372b-9b53-9196ea67df2f.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-e81d3b28-8a8e-372b-9b53-9196ea67df2f",
- "owner": {
- "substance": {
- "uuid": "FCSV-c2bce3a6-e09a-3fdc-a1f5-2281b22bb892"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e832825b-13bd-3480-a703-20f468c2a4c4.json b/test/data/enm/study-FCSV-e832825b-13bd-3480-a703-20f468c2a4c4.json
deleted file mode 100644
index ff49732..0000000
--- a/test/data/enm/study-FCSV-e832825b-13bd-3480-a703-20f468c2a4c4.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-e832825b-13bd-3480-a703-20f468c2a4c4",
- "owner": {
- "substance": {
- "uuid": "FCSV-7c56798c-f7cd-37d3-8a67-ead57f36db31"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e85722df-5306-36c4-8574-35d4cbd566a5.json b/test/data/enm/study-FCSV-e85722df-5306-36c4-8574-35d4cbd566a5.json
deleted file mode 100644
index d3fd337..0000000
--- a/test/data/enm/study-FCSV-e85722df-5306-36c4-8574-35d4cbd566a5.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-e85722df-5306-36c4-8574-35d4cbd566a5",
- "owner": {
- "substance": {
- "uuid": "FCSV-6d5b38c4-f57f-31de-b8b4-2719792f82f2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 213.324,
- "errQualifier": "sd",
- "errorValue": 4.554
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.069
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e8686db7-c2de-3795-a6e5-106ae8c7adb6.json b/test/data/enm/study-FCSV-e8686db7-c2de-3795-a6e5-106ae8c7adb6.json
deleted file mode 100644
index e59fc13..0000000
--- a/test/data/enm/study-FCSV-e8686db7-c2de-3795-a6e5-106ae8c7adb6.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-e8686db7-c2de-3795-a6e5-106ae8c7adb6",
- "owner": {
- "substance": {
- "uuid": "FCSV-cb2f11a0-4af8-318b-8a60-3908f45c2e65"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 31.6,
- "errQualifier": "sd",
- "errorValue": 3.8
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e8a18130-f808-346e-b2f9-635dcb80870b.json b/test/data/enm/study-FCSV-e8a18130-f808-346e-b2f9-635dcb80870b.json
deleted file mode 100644
index d1921a5..0000000
--- a/test/data/enm/study-FCSV-e8a18130-f808-346e-b2f9-635dcb80870b.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-e8a18130-f808-346e-b2f9-635dcb80870b",
- "owner": {
- "substance": {
- "uuid": "FCSV-cd7105f2-f630-360e-b8dc-ff42b18bb421"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e8ec3254-be67-3fd4-a213-2ec7f347172f.json b/test/data/enm/study-FCSV-e8ec3254-be67-3fd4-a213-2ec7f347172f.json
deleted file mode 100644
index 0b64e60..0000000
--- a/test/data/enm/study-FCSV-e8ec3254-be67-3fd4-a213-2ec7f347172f.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-e8ec3254-be67-3fd4-a213-2ec7f347172f",
- "owner": {
- "substance": {
- "uuid": "FCSV-8a45dec8-a551-33cc-a7ac-7750d9f30389"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.252,
- "errQualifier": "sd",
- "errorValue": 0.012
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.395,
- "errQualifier": "sd",
- "errorValue": 0.078
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 539.3,
- "errQualifier": "sd",
- "errorValue": 1.08
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e8ff74ab-fd58-3d4b-8a10-0e1e34804324.json b/test/data/enm/study-FCSV-e8ff74ab-fd58-3d4b-8a10-0e1e34804324.json
deleted file mode 100644
index df62c11..0000000
--- a/test/data/enm/study-FCSV-e8ff74ab-fd58-3d4b-8a10-0e1e34804324.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-e8ff74ab-fd58-3d4b-8a10-0e1e34804324",
- "owner": {
- "substance": {
- "uuid": "FCSV-3c5fb4b0-2e4e-3dae-9eb2-1dbfd202cd13"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e90eda89-9947-3902-b951-dfd82bcc5e75.json b/test/data/enm/study-FCSV-e90eda89-9947-3902-b951-dfd82bcc5e75.json
deleted file mode 100644
index 54a1c22..0000000
--- a/test/data/enm/study-FCSV-e90eda89-9947-3902-b951-dfd82bcc5e75.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-e90eda89-9947-3902-b951-dfd82bcc5e75",
- "owner": {
- "substance": {
- "uuid": "FCSV-93c29ebf-e80e-354c-893f-923385c72858"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 256.669,
- "errQualifier": "sd",
- "errorValue": 8.92
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.052
- }
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diff --git a/test/data/enm/study-FCSV-e9491bb4-e18c-3f7c-a633-3a877f0b2771.json b/test/data/enm/study-FCSV-e9491bb4-e18c-3f7c-a633-3a877f0b2771.json
deleted file mode 100644
index 4ce9201..0000000
--- a/test/data/enm/study-FCSV-e9491bb4-e18c-3f7c-a633-3a877f0b2771.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-e9491bb4-e18c-3f7c-a633-3a877f0b2771",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
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- "effects": [
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- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 14.9,
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- "endpoint": "Density",
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- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
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- {
- "endpoint": "MW",
- "conditions": {
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- "Remark": null,
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- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
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- {
- "endpoint": "Mol/NP",
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- "Remark": null,
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- "result": {
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diff --git a/test/data/enm/study-FCSV-e96c5ac1-9320-317a-9fd3-4319d8606498.json b/test/data/enm/study-FCSV-e96c5ac1-9320-317a-9fd3-4319d8606498.json
deleted file mode 100644
index c1ecfc6..0000000
--- a/test/data/enm/study-FCSV-e96c5ac1-9320-317a-9fd3-4319d8606498.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-e96c5ac1-9320-317a-9fd3-4319d8606498",
- "owner": {
- "substance": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 22.45,
- "errQualifier": "sd",
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- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 48.09,
- "errQualifier": "sd",
- "errorValue": 2.21
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loValue": 21.44,
- "errQualifier": "sd",
- "errorValue": 1.96
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "errQualifier": "sd",
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- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 39.75,
- "errQualifier": "sd",
- "errorValue": 0.39
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
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- "MEDIUM": "Human serum (Sigma #H4522)",
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- "Remark": null,
- "SEQ_NUM": null
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- "result": {
- "unit": "nm",
- "loValue": 40.22,
- "errQualifier": "sd",
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- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
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- "Remark": null,
- "SEQ_NUM": null
- },
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- "loValue": 39.75,
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- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 84.19,
- "errQualifier": "sd",
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e98a0914-318b-3a36-996b-dd2dff1dc911.json b/test/data/enm/study-FCSV-e98a0914-318b-3a36-996b-dd2dff1dc911.json
deleted file mode 100644
index 8991196..0000000
--- a/test/data/enm/study-FCSV-e98a0914-318b-3a36-996b-dd2dff1dc911.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-e98a0914-318b-3a36-996b-dd2dff1dc911",
- "owner": {
- "substance": {
- "uuid": "FCSV-70406142-0fd6-30bd-873b-5cce39016ed5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 59.3,
- "errQualifier": "sd",
- "errorValue": 6.4
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-e9c24201-2e88-31b2-81b5-b6b352493777.json b/test/data/enm/study-FCSV-e9c24201-2e88-31b2-81b5-b6b352493777.json
deleted file mode 100644
index aba87ac..0000000
--- a/test/data/enm/study-FCSV-e9c24201-2e88-31b2-81b5-b6b352493777.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-e9c24201-2e88-31b2-81b5-b6b352493777",
- "owner": {
- "substance": {
- "uuid": "FCSV-4dd1bf89-e885-3128-abe2-9a87fbbd0242"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ea0d9762-d05d-3e13-95bd-b2ff3f376679.json b/test/data/enm/study-FCSV-ea0d9762-d05d-3e13-95bd-b2ff3f376679.json
deleted file mode 100644
index 56d281f..0000000
--- a/test/data/enm/study-FCSV-ea0d9762-d05d-3e13-95bd-b2ff3f376679.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-ea0d9762-d05d-3e13-95bd-b2ff3f376679",
- "owner": {
- "substance": {
- "uuid": "FCSV-cd7105f2-f630-360e-b8dc-ff42b18bb421"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.396,
- "errQualifier": "sd",
- "errorValue": 0.108
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.321,
- "errQualifier": "sd",
- "errorValue": 0.028
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 534.13,
- "errQualifier": "sd",
- "errorValue": 17.43
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ea4deeaa-563c-3169-8cd5-a64a41dea48b.json b/test/data/enm/study-FCSV-ea4deeaa-563c-3169-8cd5-a64a41dea48b.json
deleted file mode 100644
index 2c13257..0000000
--- a/test/data/enm/study-FCSV-ea4deeaa-563c-3169-8cd5-a64a41dea48b.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-ea4deeaa-563c-3169-8cd5-a64a41dea48b",
- "owner": {
- "substance": {
- "uuid": "FCSV-acbbde2e-0238-3d4c-a2f4-7629ad478e6a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 78.47,
- "errQualifier": "sd",
- "errorValue": 1.65
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 94.45,
- "errQualifier": "sd",
- "errorValue": 3.26
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 63.26,
- "errQualifier": "sd",
- "errorValue": 12.38
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 89.7,
- "errQualifier": "sd",
- "errorValue": 6.08
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 85.49,
- "errQualifier": "sd",
- "errorValue": 15.47
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 79.84,
- "errQualifier": "sd",
- "errorValue": 11.1
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 85.49,
- "errQualifier": "sd",
- "errorValue": 1.59
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 100.92,
- "errQualifier": "sd",
- "errorValue": 1.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ea5c5fb6-37f9-3e24-a3a3-d5627ae9cf1d.json b/test/data/enm/study-FCSV-ea5c5fb6-37f9-3e24-a3a3-d5627ae9cf1d.json
deleted file mode 100644
index 250700f..0000000
--- a/test/data/enm/study-FCSV-ea5c5fb6-37f9-3e24-a3a3-d5627ae9cf1d.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-ea5c5fb6-37f9-3e24-a3a3-d5627ae9cf1d",
- "owner": {
- "substance": {
- "uuid": "FCSV-c4fe20ba-de05-36c2-9842-5433ce33bd72"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 242.478,
- "errQualifier": "sd",
- "errorValue": 1.237
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.027
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ea8b1423-e454-3451-993f-293c388b3bd7.json b/test/data/enm/study-FCSV-ea8b1423-e454-3451-993f-293c388b3bd7.json
deleted file mode 100644
index dce94ff..0000000
--- a/test/data/enm/study-FCSV-ea8b1423-e454-3451-993f-293c388b3bd7.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-ea8b1423-e454-3451-993f-293c388b3bd7",
- "owner": {
- "substance": {
- "uuid": "FCSV-07ecc16e-528e-3904-bb96-0812dff8ea65"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 2.08,
- "errQualifier": "sd",
- "errorValue": 0.04
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-eac16429-ad44-3079-9396-587113221564.json b/test/data/enm/study-FCSV-eac16429-ad44-3079-9396-587113221564.json
deleted file mode 100644
index ddd713a..0000000
--- a/test/data/enm/study-FCSV-eac16429-ad44-3079-9396-587113221564.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-eac16429-ad44-3079-9396-587113221564",
- "owner": {
- "substance": {
- "uuid": "FCSV-ccd3915e-0b1d-38f4-98b3-02b1a16aace7"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "16-Mercaptohexadecanoic acid"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-eae8a666-a3e8-300e-a14c-46cc6044e208.json b/test/data/enm/study-FCSV-eae8a666-a3e8-300e-a14c-46cc6044e208.json
deleted file mode 100644
index fb55321..0000000
--- a/test/data/enm/study-FCSV-eae8a666-a3e8-300e-a14c-46cc6044e208.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-eae8a666-a3e8-300e-a14c-46cc6044e208",
- "owner": {
- "substance": {
- "uuid": "FCSV-206b1a13-e02a-38a0-88ec-d5a8bfdabc55"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "2-Naphthalenethiol"
- }
- },
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Pluronic F-127"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-eb3a8d74-14f7-3a40-8ae5-01502b103623.json b/test/data/enm/study-FCSV-eb3a8d74-14f7-3a40-8ae5-01502b103623.json
deleted file mode 100644
index 1ad7382..0000000
--- a/test/data/enm/study-FCSV-eb3a8d74-14f7-3a40-8ae5-01502b103623.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-eb3a8d74-14f7-3a40-8ae5-01502b103623",
- "owner": {
- "substance": {
- "uuid": "FCSV-1a71d2b3-8121-3790-a66b-774b12829bb3"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.015,
- "errQualifier": "sd",
- "errorValue": 0.016
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -6.083,
- "errQualifier": "std",
- "errorValue": 1.605
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-eb41e4dc-3dac-30ae-b8ad-2b4cae4100c6.json b/test/data/enm/study-FCSV-eb41e4dc-3dac-30ae-b8ad-2b4cae4100c6.json
deleted file mode 100644
index 0fa9e36..0000000
--- a/test/data/enm/study-FCSV-eb41e4dc-3dac-30ae-b8ad-2b4cae4100c6.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-eb41e4dc-3dac-30ae-b8ad-2b4cae4100c6",
- "owner": {
- "substance": {
- "uuid": "FCSV-de7a4a31-ee94-313e-bfc4-acc11f0b56ec"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 3.47,
- "errQualifier": "sd",
- "errorValue": 0.37
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-eb88bf67-f3e9-318f-9fa0-3b77937ffb3b.json b/test/data/enm/study-FCSV-eb88bf67-f3e9-318f-9fa0-3b77937ffb3b.json
deleted file mode 100644
index 9b35ac1..0000000
--- a/test/data/enm/study-FCSV-eb88bf67-f3e9-318f-9fa0-3b77937ffb3b.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-eb88bf67-f3e9-318f-9fa0-3b77937ffb3b",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f0e4035-24d4-3a81-b20b-bd156f210616"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
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- "result": {
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- "loQualifier": "mean",
- "loValue": 71.33,
- "errQualifier": "sd",
- "errorValue": 0.79
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
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- "result": {
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- "loQualifier": "mean",
- "loValue": 102.9,
- "errQualifier": "sd",
- "errorValue": 6.84
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 70.96,
- "errQualifier": "sd",
- "errorValue": 1.22
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 107.21,
- "errQualifier": "sd",
- "errorValue": 14.13
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 75.66,
- "errQualifier": "sd",
- "errorValue": 1.37
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 94.83,
- "errQualifier": "sd",
- "errorValue": 1.37
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 75.66,
- "errQualifier": "sd",
- "errorValue": 1.15
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 107.21,
- "errQualifier": "sd",
- "errorValue": 10.26
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-eb9c5657-ba3f-32e0-9d33-fb6380491848.json b/test/data/enm/study-FCSV-eb9c5657-ba3f-32e0-9d33-fb6380491848.json
deleted file mode 100644
index 37f38fe..0000000
--- a/test/data/enm/study-FCSV-eb9c5657-ba3f-32e0-9d33-fb6380491848.json
+++ /dev/null
@@ -1,80 +0,0 @@
-{
- "uuid": "FCSV-eb9c5657-ba3f-32e0-9d33-fb6380491848",
- "owner": {
- "substance": {
- "uuid": "FCSV-50aee86c-a3a2-3c46-86bf-5ac25485fc13"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
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- "r_isUsedforMSDS": "false",
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- "r_studyResultType": "experimental result",
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- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "1-Dodecanethiol"
- }
- },
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "benzyldimethylhexadecylammonium bromide"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ebbffbd5-cd8a-3fb3-9fa7-aa8f45b36cbd.json b/test/data/enm/study-FCSV-ebbffbd5-cd8a-3fb3-9fa7-aa8f45b36cbd.json
deleted file mode 100644
index b0ad606..0000000
--- a/test/data/enm/study-FCSV-ebbffbd5-cd8a-3fb3-9fa7-aa8f45b36cbd.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-ebbffbd5-cd8a-3fb3-9fa7-aa8f45b36cbd",
- "owner": {
- "substance": {
- "uuid": "FCSV-9cc7dd73-d27f-35a0-a3f1-81a18429b76a"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
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- },
- "reliability": {
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- },
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- },
- "effects": [
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- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -24.08,
- "errQualifier": "sd",
- "errorValue": 0.68
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -6.73,
- "errQualifier": "sd",
- "errorValue": 2.72
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ebc69225-39ab-3067-805b-5a7f7ece1faa.json b/test/data/enm/study-FCSV-ebc69225-39ab-3067-805b-5a7f7ece1faa.json
deleted file mode 100644
index 74dcb6e..0000000
--- a/test/data/enm/study-FCSV-ebc69225-39ab-3067-805b-5a7f7ece1faa.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-ebc69225-39ab-3067-805b-5a7f7ece1faa",
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- "uuid": "FCSV-aab0ef77-8a71-36d7-9185-d2f76b9e3567"
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
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- "effects": [
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- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 2.173,
- "errQualifier": "sd",
- "errorValue": 0.875
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ec2c22ea-630e-3903-8727-dad4e248db61.json b/test/data/enm/study-FCSV-ec2c22ea-630e-3903-8727-dad4e248db61.json
deleted file mode 100644
index deaf8b3..0000000
--- a/test/data/enm/study-FCSV-ec2c22ea-630e-3903-8727-dad4e248db61.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-ec2c22ea-630e-3903-8727-dad4e248db61",
- "owner": {
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- "uuid": "FCSV-6d8b8701-7fca-3936-a45e-66c17012fc75"
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
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- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "effects": [
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- "conditions": {
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
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- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
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- }
- ]
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diff --git a/test/data/enm/study-FCSV-ec5f984c-6550-3f0c-b272-d76d4868264c.json b/test/data/enm/study-FCSV-ec5f984c-6550-3f0c-b272-d76d4868264c.json
deleted file mode 100644
index a8fdc6f..0000000
--- a/test/data/enm/study-FCSV-ec5f984c-6550-3f0c-b272-d76d4868264c.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-ec5f984c-6550-3f0c-b272-d76d4868264c",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.061,
- "errQualifier": "sd",
- "errorValue": 0.003
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.038,
- "errQualifier": "sd",
- "errorValue": 0.028
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-ecc74fea-7795-3227-8805-a97dab091524.json b/test/data/enm/study-FCSV-ecc74fea-7795-3227-8805-a97dab091524.json
deleted file mode 100644
index b5a7c71..0000000
--- a/test/data/enm/study-FCSV-ecc74fea-7795-3227-8805-a97dab091524.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-ecc74fea-7795-3227-8805-a97dab091524",
- "owner": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
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- },
- "parameters": {
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- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
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- },
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- "effects": [
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- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
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- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
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diff --git a/test/data/enm/study-FCSV-ecdd3eb0-068c-31cd-9300-31ec0f02902d.json b/test/data/enm/study-FCSV-ecdd3eb0-068c-31cd-9300-31ec0f02902d.json
deleted file mode 100644
index 2c26f07..0000000
--- a/test/data/enm/study-FCSV-ecdd3eb0-068c-31cd-9300-31ec0f02902d.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-ecdd3eb0-068c-31cd-9300-31ec0f02902d",
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
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- },
- "reliability": {
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- },
- "effects": [
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- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.056,
- "errQualifier": "sd",
- "errorValue": 0.04
- }
- },
- {
- "endpoint": "Log2 transformed",
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- "loQualifier": "mean",
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- "errQualifier": "std",
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diff --git a/test/data/enm/study-FCSV-ed3375a4-029a-3960-8120-5fc0a1a4edfd.json b/test/data/enm/study-FCSV-ed3375a4-029a-3960-8120-5fc0a1a4edfd.json
deleted file mode 100644
index 754215b..0000000
--- a/test/data/enm/study-FCSV-ed3375a4-029a-3960-8120-5fc0a1a4edfd.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-ed3375a4-029a-3960-8120-5fc0a1a4edfd",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
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- "effects": [
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- "pH": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": -4.78,
- "errQualifier": "sd",
- "errorValue": 4.48
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": -7.95,
- "errQualifier": "sd",
- "errorValue": 3.14
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-edd88a40-2c5c-33b1-9df5-20deb4a0d026.json b/test/data/enm/study-FCSV-edd88a40-2c5c-33b1-9df5-20deb4a0d026.json
deleted file mode 100644
index 2ceeeb3..0000000
--- a/test/data/enm/study-FCSV-edd88a40-2c5c-33b1-9df5-20deb4a0d026.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-edd88a40-2c5c-33b1-9df5-20deb4a0d026",
- "owner": {
- "substance": {
- "uuid": "FCSV-ae94c9b5-ffeb-3b3b-8464-1dfe3dbde073"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Core size",
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loValue": 14.9,
- "errQualifier": "sd",
- "errorValue": 1.2
- }
- },
- {
- "endpoint": "Density",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
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- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ef00af8e-6601-3a9e-9acb-5bac7bcfe71e.json b/test/data/enm/study-FCSV-ef00af8e-6601-3a9e-9acb-5bac7bcfe71e.json
deleted file mode 100644
index df31489..0000000
--- a/test/data/enm/study-FCSV-ef00af8e-6601-3a9e-9acb-5bac7bcfe71e.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-ef00af8e-6601-3a9e-9acb-5bac7bcfe71e",
- "owner": {
- "substance": {
- "uuid": "FCSV-63da0f0e-51b8-3c56-b5d3-d4e0e9fb06a6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
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- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Methoxy-poly(ethylene glycol)-thiol (20kDa) (low density)"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ef550668-e0d5-3c92-92e8-eccf38cafbe8.json b/test/data/enm/study-FCSV-ef550668-e0d5-3c92-92e8-eccf38cafbe8.json
deleted file mode 100644
index c65e0fd..0000000
--- a/test/data/enm/study-FCSV-ef550668-e0d5-3c92-92e8-eccf38cafbe8.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-ef550668-e0d5-3c92-92e8-eccf38cafbe8",
- "owner": {
- "substance": {
- "uuid": "FCSV-9043e884-a5ba-3fa6-a103-dee0c7b1b3dd"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
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- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 0.261,
- "errQualifier": "sd",
- "errorValue": 0.026
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.363,
- "errQualifier": "sd",
- "errorValue": 0.079
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
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- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 540.1,
- "errQualifier": "sd",
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diff --git a/test/data/enm/study-FCSV-ef9748ad-771e-35a4-98a8-5f9f429b42b5.json b/test/data/enm/study-FCSV-ef9748ad-771e-35a4-98a8-5f9f429b42b5.json
deleted file mode 100644
index bf3ca09..0000000
--- a/test/data/enm/study-FCSV-ef9748ad-771e-35a4-98a8-5f9f429b42b5.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-ef9748ad-771e-35a4-98a8-5f9f429b42b5",
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
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- "effects": [
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- "Remark": null,
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- },
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- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
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- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
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- "Remark": null,
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- },
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- "loValue": 45.88,
- "errQualifier": "sd",
- "errorValue": 18.62
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 34.47,
- "errQualifier": "sd",
- "errorValue": 5.5
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 145.75,
- "errQualifier": "sd",
- "errorValue": 2.96
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23,
- "errQualifier": "sd",
- "errorValue": 0.91
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 145.75,
- "errQualifier": "sd",
- "errorValue": 71.49
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 168.93,
- "errQualifier": "sd",
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diff --git a/test/data/enm/study-FCSV-efaff5b4-0956-3c49-bb4d-a0b558140d67.json b/test/data/enm/study-FCSV-efaff5b4-0956-3c49-bb4d-a0b558140d67.json
deleted file mode 100644
index 96664a6..0000000
--- a/test/data/enm/study-FCSV-efaff5b4-0956-3c49-bb4d-a0b558140d67.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-efaff5b4-0956-3c49-bb4d-a0b558140d67",
- "owner": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
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- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
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- "endpoint": "Core size",
- "conditions": {
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 31.6,
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- },
- {
- "endpoint": "Density",
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- },
- "result": {
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- "loQualifier": "",
- "loValue": 19.1
- }
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- {
- "endpoint": "MW",
- "conditions": {
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- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
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- {
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- {
- "endpoint": "SA/NP",
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
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diff --git a/test/data/enm/study-FCSV-f02a92e5-ec5a-368c-a276-4aa421c17d84.json b/test/data/enm/study-FCSV-f02a92e5-ec5a-368c-a276-4aa421c17d84.json
deleted file mode 100644
index 118f74c..0000000
--- a/test/data/enm/study-FCSV-f02a92e5-ec5a-368c-a276-4aa421c17d84.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-f02a92e5-ec5a-368c-a276-4aa421c17d84",
- "owner": {
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
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- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
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- "category": {
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- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
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- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
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- },
- "reliability": {
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- "r_isUsedforClassification": "false",
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- "r_value": null
- },
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- },
- "effects": [
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- "endpoint": "Spectral counts",
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f065d547-ff21-3c10-b507-d37143c230c4.json b/test/data/enm/study-FCSV-f065d547-ff21-3c10-b507-d37143c230c4.json
deleted file mode 100644
index 2ef1626..0000000
--- a/test/data/enm/study-FCSV-f065d547-ff21-3c10-b507-d37143c230c4.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-f065d547-ff21-3c10-b507-d37143c230c4",
- "owner": {
- "substance": {
- "uuid": "FCSV-b228fc7b-c407-368a-bc1c-359c7375bb9b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.106,
- "errQualifier": "sd",
- "errorValue": 0.007
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.134,
- "errQualifier": "sd",
- "errorValue": 0.04
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f0a8f01e-cafc-3783-a596-8e77bf7ddf80.json b/test/data/enm/study-FCSV-f0a8f01e-cafc-3783-a596-8e77bf7ddf80.json
deleted file mode 100644
index 9f61a33..0000000
--- a/test/data/enm/study-FCSV-f0a8f01e-cafc-3783-a596-8e77bf7ddf80.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-f0a8f01e-cafc-3783-a596-8e77bf7ddf80",
- "owner": {
- "substance": {
- "uuid": "FCSV-ded649fa-97e1-3ec6-bb3d-623506389ee0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "3-Mercaptopropionic acid"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f0fc18dc-271f-3be6-93a1-a48041b27164.json b/test/data/enm/study-FCSV-f0fc18dc-271f-3be6-93a1-a48041b27164.json
deleted file mode 100644
index 2b91853..0000000
--- a/test/data/enm/study-FCSV-f0fc18dc-271f-3be6-93a1-a48041b27164.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-f0fc18dc-271f-3be6-93a1-a48041b27164",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc77c03d-4e75-3fab-bb3d-17b983663819"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "N-Acetyl-L-cysteine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f110f33c-d64f-3a2d-a037-15ac30c1c6c1.json b/test/data/enm/study-FCSV-f110f33c-d64f-3a2d-a037-15ac30c1c6c1.json
deleted file mode 100644
index 06c62b0..0000000
--- a/test/data/enm/study-FCSV-f110f33c-d64f-3a2d-a037-15ac30c1c6c1.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-f110f33c-d64f-3a2d-a037-15ac30c1c6c1",
- "owner": {
- "substance": {
- "uuid": "FCSV-8f5cd32a-3350-300b-91d0-87000ee5d7ee"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 30.95,
- "errQualifier": "sd",
- "errorValue": 3
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 90.06,
- "errQualifier": "sd",
- "errorValue": 7.28
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 11.76,
- "errQualifier": "sd",
- "errorValue": 9.37
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 67.79,
- "errQualifier": "sd",
- "errorValue": 33.33
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 47.5,
- "errQualifier": "sd",
- "errorValue": 8.69
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 53.87,
- "errQualifier": "sd",
- "errorValue": 24.74
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 47.5,
- "errQualifier": "sd",
- "errorValue": 4.13
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 106.7,
- "errQualifier": "sd",
- "errorValue": 16.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f133447c-3dfe-371b-b333-9617ccf98fe5.json b/test/data/enm/study-FCSV-f133447c-3dfe-371b-b333-9617ccf98fe5.json
deleted file mode 100644
index cd19411..0000000
--- a/test/data/enm/study-FCSV-f133447c-3dfe-371b-b333-9617ccf98fe5.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-f133447c-3dfe-371b-b333-9617ccf98fe5",
- "owner": {
- "substance": {
- "uuid": "FCSV-6d8b8701-7fca-3936-a45e-66c17012fc75"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.362,
- "errQualifier": "sd",
- "errorValue": 0.147
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.326,
- "errQualifier": "sd",
- "errorValue": 0.023
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 537.23,
- "errQualifier": "sd",
- "errorValue": 1.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f1762c51-9d5c-3bf3-a581-6b7c4b0c3dcc.json b/test/data/enm/study-FCSV-f1762c51-9d5c-3bf3-a581-6b7c4b0c3dcc.json
deleted file mode 100644
index ef5dab6..0000000
--- a/test/data/enm/study-FCSV-f1762c51-9d5c-3bf3-a581-6b7c4b0c3dcc.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-f1762c51-9d5c-3bf3-a581-6b7c4b0c3dcc",
- "owner": {
- "substance": {
- "uuid": "FCSV-ed95bb69-9fa7-3a4a-b4a4-32dd947d4d1a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 263.69,
- "errQualifier": "sd",
- "errorValue": 33.967
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.026
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f1cb23f6-9776-31fe-9053-6c697ebdba64.json b/test/data/enm/study-FCSV-f1cb23f6-9776-31fe-9053-6c697ebdba64.json
deleted file mode 100644
index 11941f1..0000000
--- a/test/data/enm/study-FCSV-f1cb23f6-9776-31fe-9053-6c697ebdba64.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-f1cb23f6-9776-31fe-9053-6c697ebdba64",
- "owner": {
- "substance": {
- "uuid": "FCSV-2de5071e-596b-3507-84fc-f9ba470cbcbf"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f1fb7819-16e8-3c90-a7f3-d1a6bcd0ba37.json b/test/data/enm/study-FCSV-f1fb7819-16e8-3c90-a7f3-d1a6bcd0ba37.json
deleted file mode 100644
index 1f8be46..0000000
--- a/test/data/enm/study-FCSV-f1fb7819-16e8-3c90-a7f3-d1a6bcd0ba37.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-f1fb7819-16e8-3c90-a7f3-d1a6bcd0ba37",
- "owner": {
- "substance": {
- "uuid": "FCSV-a153cba3-a82d-3e3c-bcbd-335cc5155f44"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 268.117,
- "errQualifier": "sd",
- "errorValue": 2.341
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 1,
- "errQualifier": "sem",
- "errorValue": 0.05
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f283b181-a562-3cd5-b56e-d468ea6c007f.json b/test/data/enm/study-FCSV-f283b181-a562-3cd5-b56e-d468ea6c007f.json
deleted file mode 100644
index 79f75a5..0000000
--- a/test/data/enm/study-FCSV-f283b181-a562-3cd5-b56e-d468ea6c007f.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-f283b181-a562-3cd5-b56e-d468ea6c007f",
- "owner": {
- "substance": {
- "uuid": "FCSV-07ecc16e-528e-3904-bb96-0812dff8ea65"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Ag]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f2d1d273-db93-3e6a-8026-96b5379831a0.json b/test/data/enm/study-FCSV-f2d1d273-db93-3e6a-8026-96b5379831a0.json
deleted file mode 100644
index 97ea773..0000000
--- a/test/data/enm/study-FCSV-f2d1d273-db93-3e6a-8026-96b5379831a0.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-f2d1d273-db93-3e6a-8026-96b5379831a0",
- "owner": {
- "substance": {
- "uuid": "FCSV-ccd3915e-0b1d-38f4-98b3-02b1a16aace7"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "PROTEOMICS_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "8.100 Proteomics"
- },
- "endpoint": "Solution-based digestion protocol for serum protein isolates",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
- "Type of method": "LC MS/MS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Spectral counts",
- "conditions": {
- },
- "result": {
- "unit": null,
- "textValue": 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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f358d269-7746-371c-9339-2fd233e014b2.json b/test/data/enm/study-FCSV-f358d269-7746-371c-9339-2fd233e014b2.json
deleted file mode 100644
index a5d2996..0000000
--- a/test/data/enm/study-FCSV-f358d269-7746-371c-9339-2fd233e014b2.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-f358d269-7746-371c-9339-2fd233e014b2",
- "owner": {
- "substance": {
- "uuid": "FCSV-acbbde2e-0238-3d4c-a2f4-7629ad478e6a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 59.3,
- "errQualifier": "sd",
- "errorValue": 6.4
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 19.1
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 197
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f38d9966-0662-3d66-9518-fdc41a8c765a.json b/test/data/enm/study-FCSV-f38d9966-0662-3d66-9518-fdc41a8c765a.json
deleted file mode 100644
index 2306148..0000000
--- a/test/data/enm/study-FCSV-f38d9966-0662-3d66-9518-fdc41a8c765a.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-f38d9966-0662-3d66-9518-fdc41a8c765a",
- "owner": {
- "substance": {
- "uuid": "FCSV-c4fe20ba-de05-36c2-9842-5433ce33bd72"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "FUNCTIONAL GROUP",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "FUNCTIONALIZATION"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Hexadecylamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f4140b2c-a916-3d24-b8e5-25a6fa9ba4a6.json b/test/data/enm/study-FCSV-f4140b2c-a916-3d24-b8e5-25a6fa9ba4a6.json
deleted file mode 100644
index af46ee7..0000000
--- a/test/data/enm/study-FCSV-f4140b2c-a916-3d24-b8e5-25a6fa9ba4a6.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-f4140b2c-a916-3d24-b8e5-25a6fa9ba4a6",
- "owner": {
- "substance": {
- "uuid": "FCSV-6405ef25-683e-3763-a4e3-f56eb93174e4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -20.23,
- "errQualifier": "sd",
- "errorValue": 2.17
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -7.81,
- "errQualifier": "sd",
- "errorValue": 4.16
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f44fa8f7-9326-337c-bab3-4bf63447a9ca.json b/test/data/enm/study-FCSV-f44fa8f7-9326-337c-bab3-4bf63447a9ca.json
deleted file mode 100644
index af6cfce..0000000
--- a/test/data/enm/study-FCSV-f44fa8f7-9326-337c-bab3-4bf63447a9ca.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-f44fa8f7-9326-337c-bab3-4bf63447a9ca",
- "owner": {
- "substance": {
- "uuid": "FCSV-2b9a077f-bef3-3ffd-a83a-77dd85db129a"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 216.958,
- "errQualifier": "sd",
- "errorValue": 4.726
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.04
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f466449d-9305-39ff-9e8b-9e2d95b68274.json b/test/data/enm/study-FCSV-f466449d-9305-39ff-9e8b-9e2d95b68274.json
deleted file mode 100644
index d1dafa7..0000000
--- a/test/data/enm/study-FCSV-f466449d-9305-39ff-9e8b-9e2d95b68274.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-f466449d-9305-39ff-9e8b-9e2d95b68274",
- "owner": {
- "substance": {
- "uuid": "FCSV-7c56798c-f7cd-37d3-8a67-ead57f36db31"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.281,
- "errQualifier": "sd",
- "errorValue": 0.09
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.449,
- "errQualifier": "sd",
- "errorValue": 0.102
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 518.4,
- "errQualifier": "sd",
- "errorValue": 0.35
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f47625f0-1cb1-3800-b0cf-24e2da8ab652.json b/test/data/enm/study-FCSV-f47625f0-1cb1-3800-b0cf-24e2da8ab652.json
deleted file mode 100644
index 9128d38..0000000
--- a/test/data/enm/study-FCSV-f47625f0-1cb1-3800-b0cf-24e2da8ab652.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-f47625f0-1cb1-3800-b0cf-24e2da8ab652",
- "owner": {
- "substance": {
- "uuid": "FCSV-2ed7ebf8-d11d-3f39-8f05-b0132ec4d7e0"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.288,
- "errQualifier": "sd",
- "errorValue": 0.472
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f508360e-9b3c-3c48-a41a-47924a1d5061.json b/test/data/enm/study-FCSV-f508360e-9b3c-3c48-a41a-47924a1d5061.json
deleted file mode 100644
index b7fa97a..0000000
--- a/test/data/enm/study-FCSV-f508360e-9b3c-3c48-a41a-47924a1d5061.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-f508360e-9b3c-3c48-a41a-47924a1d5061",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.081,
- "errQualifier": "sd",
- "errorValue": 0.022
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.144,
- "errQualifier": "sd",
- "errorValue": 0.009
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f55c4239-29fe-3303-ac58-b96b99dc2c3d.json b/test/data/enm/study-FCSV-f55c4239-29fe-3303-ac58-b96b99dc2c3d.json
deleted file mode 100644
index 741372d..0000000
--- a/test/data/enm/study-FCSV-f55c4239-29fe-3303-ac58-b96b99dc2c3d.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-f55c4239-29fe-3303-ac58-b96b99dc2c3d",
- "owner": {
- "substance": {
- "uuid": "FCSV-80a36fc5-9a73-358c-829b-2e69eea82125"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f59dae02-6546-3871-90d4-22400760b161.json b/test/data/enm/study-FCSV-f59dae02-6546-3871-90d4-22400760b161.json
deleted file mode 100644
index c74a5f4..0000000
--- a/test/data/enm/study-FCSV-f59dae02-6546-3871-90d4-22400760b161.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-f59dae02-6546-3871-90d4-22400760b161",
- "owner": {
- "substance": {
- "uuid": "FCSV-05f4c488-5326-3d8a-be41-c57c468b2fa4"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.00083,
- "errQualifier": "sd",
- "errorValue": 0.001
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -10.228,
- "errQualifier": "std",
- "errorValue": 2.04
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f5c13490-63ee-336e-9a25-5999e72f8f77.json b/test/data/enm/study-FCSV-f5c13490-63ee-336e-9a25-5999e72f8f77.json
deleted file mode 100644
index 9e58413..0000000
--- a/test/data/enm/study-FCSV-f5c13490-63ee-336e-9a25-5999e72f8f77.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-f5c13490-63ee-336e-9a25-5999e72f8f77",
- "owner": {
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- "uuid": "FCSV-3c5fb4b0-2e4e-3dae-9eb2-1dbfd202cd13"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
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- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
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- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
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- "loQualifier": "mean",
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- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
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- },
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- {
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "errorValue": 3.37
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- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
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- "MEDIUM": "Human serum (Sigma #H4522)",
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loValue": 42.63,
- "errQualifier": "sd",
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- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
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- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
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- "result": {
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- "loValue": 48.43,
- "errQualifier": "sd",
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- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
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- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loValue": 52.06,
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diff --git a/test/data/enm/study-FCSV-f5d6422c-d681-3567-ba37-8d2d0aff732d.json b/test/data/enm/study-FCSV-f5d6422c-d681-3567-ba37-8d2d0aff732d.json
deleted file mode 100644
index 33f3cdb..0000000
--- a/test/data/enm/study-FCSV-f5d6422c-d681-3567-ba37-8d2d0aff732d.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-f5d6422c-d681-3567-ba37-8d2d0aff732d",
- "owner": {
- "substance": {
- "uuid": "FCSV-31bd6c7b-3247-3db9-93b6-59e0d3ecefa9"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
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- "endpoint": "Description",
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- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
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- "reliability": {
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- "r_studyResultType": "experimental result",
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- },
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- "effects": [
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- "endpoint": "ATOMIC COMPOSITION",
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Ag]"
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- }
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-}
diff --git a/test/data/enm/study-FCSV-f5d79ce0-419d-3157-9b4d-0fe063f383ad.json b/test/data/enm/study-FCSV-f5d79ce0-419d-3157-9b4d-0fe063f383ad.json
deleted file mode 100644
index d6d87ca..0000000
--- a/test/data/enm/study-FCSV-f5d79ce0-419d-3157-9b4d-0fe063f383ad.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-f5d79ce0-419d-3157-9b4d-0fe063f383ad",
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- "uuid": "FCSV-0542c513-7015-3169-a1c1-e00f811a7ba0"
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
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- "textValue": "[Au]"
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diff --git a/test/data/enm/study-FCSV-f62472d9-41a4-3392-9760-109961cbda7f.json b/test/data/enm/study-FCSV-f62472d9-41a4-3392-9760-109961cbda7f.json
deleted file mode 100644
index af24d8b..0000000
--- a/test/data/enm/study-FCSV-f62472d9-41a4-3392-9760-109961cbda7f.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "FCSV-f62472d9-41a4-3392-9760-109961cbda7f",
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- },
- "protocol": {
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- "code": "PROTEOMICS_SECTION",
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- "title": "8.100 Proteomics"
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- "endpoint": "Solution-based digestion protocol for serum protein isolates",
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- ]
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- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)",
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- "effects": [
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- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f6949345-efac-3430-b4fe-92a64f8eb885.json b/test/data/enm/study-FCSV-f6949345-efac-3430-b4fe-92a64f8eb885.json
deleted file mode 100644
index 5da78b3..0000000
--- a/test/data/enm/study-FCSV-f6949345-efac-3430-b4fe-92a64f8eb885.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-f6949345-efac-3430-b4fe-92a64f8eb885",
- "owner": {
- "substance": {
- "uuid": "FCSV-b38f2b71-aa2d-3d72-af88-166a60bedee2"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.024,
- "errQualifier": "sd",
- "errorValue": 0.012
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
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diff --git a/test/data/enm/study-FCSV-f6a8d4f7-7006-3b77-85bd-25ab632ecf15.json b/test/data/enm/study-FCSV-f6a8d4f7-7006-3b77-85bd-25ab632ecf15.json
deleted file mode 100644
index c2278bd..0000000
--- a/test/data/enm/study-FCSV-f6a8d4f7-7006-3b77-85bd-25ab632ecf15.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-f6a8d4f7-7006-3b77-85bd-25ab632ecf15",
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diff --git a/test/data/enm/study-FCSV-f6c85c90-cb36-3ad8-9f2c-63cfcfcb76eb.json b/test/data/enm/study-FCSV-f6c85c90-cb36-3ad8-9f2c-63cfcfcb76eb.json
deleted file mode 100644
index 68991a5..0000000
--- a/test/data/enm/study-FCSV-f6c85c90-cb36-3ad8-9f2c-63cfcfcb76eb.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/study-FCSV-f6fb49c0-4758-3cd8-bc59-9436b30115e9.json b/test/data/enm/study-FCSV-f6fb49c0-4758-3cd8-bc59-9436b30115e9.json
deleted file mode 100644
index 14b1d8f..0000000
--- a/test/data/enm/study-FCSV-f6fb49c0-4758-3cd8-bc59-9436b30115e9.json
+++ /dev/null
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-{
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diff --git a/test/data/enm/study-FCSV-f73ad8d1-2c74-3682-8310-721fe29bb273.json b/test/data/enm/study-FCSV-f73ad8d1-2c74-3682-8310-721fe29bb273.json
deleted file mode 100644
index 72b0aba..0000000
--- a/test/data/enm/study-FCSV-f73ad8d1-2c74-3682-8310-721fe29bb273.json
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-{
- "uuid": "FCSV-f73ad8d1-2c74-3682-8310-721fe29bb273",
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diff --git a/test/data/enm/study-FCSV-f7acf54b-25cd-3e8e-ad60-7ff84e60fc04.json b/test/data/enm/study-FCSV-f7acf54b-25cd-3e8e-ad60-7ff84e60fc04.json
deleted file mode 100644
index 1f164e0..0000000
--- a/test/data/enm/study-FCSV-f7acf54b-25cd-3e8e-ad60-7ff84e60fc04.json
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-{
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diff --git a/test/data/enm/study-FCSV-f827d490-2a8a-35ec-acdf-5f491ba91ab1.json b/test/data/enm/study-FCSV-f827d490-2a8a-35ec-acdf-5f491ba91ab1.json
deleted file mode 100644
index b446041..0000000
--- a/test/data/enm/study-FCSV-f827d490-2a8a-35ec-acdf-5f491ba91ab1.json
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-{
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diff --git a/test/data/enm/study-FCSV-f8352d01-c7b8-39c6-a94e-8d24fb407288.json b/test/data/enm/study-FCSV-f8352d01-c7b8-39c6-a94e-8d24fb407288.json
deleted file mode 100644
index 2c5801d..0000000
--- a/test/data/enm/study-FCSV-f8352d01-c7b8-39c6-a94e-8d24fb407288.json
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-{
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diff --git a/test/data/enm/study-FCSV-f84798a1-a41c-3b87-9977-d39c025b7dd9.json b/test/data/enm/study-FCSV-f84798a1-a41c-3b87-9977-d39c025b7dd9.json
deleted file mode 100644
index bb7abdb..0000000
--- a/test/data/enm/study-FCSV-f84798a1-a41c-3b87-9977-d39c025b7dd9.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
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- "Remark": null,
- "TYPE": {
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diff --git a/test/data/enm/study-FCSV-f86e88d3-5535-3694-96d1-e88a4b415801.json b/test/data/enm/study-FCSV-f86e88d3-5535-3694-96d1-e88a4b415801.json
deleted file mode 100644
index c7ec1ca..0000000
--- a/test/data/enm/study-FCSV-f86e88d3-5535-3694-96d1-e88a4b415801.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-f86e88d3-5535-3694-96d1-e88a4b415801",
- "owner": {
- "substance": {
- "uuid": "FCSV-815715e8-0cc8-3641-897c-4530d961cfe0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
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- },
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.017,
- "errQualifier": "sd",
- "errorValue": 0.013
- }
- },
- {
- "endpoint": "Log2 transformed",
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- "Cell": "A549"
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": -5.872,
- "errQualifier": "std",
- "errorValue": 1.113
- }
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diff --git a/test/data/enm/study-FCSV-f8ba0d7b-df8d-362f-bd4f-04bc59dbcafb.json b/test/data/enm/study-FCSV-f8ba0d7b-df8d-362f-bd4f-04bc59dbcafb.json
deleted file mode 100644
index efe6900..0000000
--- a/test/data/enm/study-FCSV-f8ba0d7b-df8d-362f-bd4f-04bc59dbcafb.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-f8ba0d7b-df8d-362f-bd4f-04bc59dbcafb",
- "owner": {
- "substance": {
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
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- "effects": [
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- "conditions": {
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- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -3.1,
- "errQualifier": "sd",
- "errorValue": 0.39
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
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- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -2.02,
- "errQualifier": "sd",
- "errorValue": 1.61
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-f8daf37b-bb2b-3503-b539-024d4f512724.json b/test/data/enm/study-FCSV-f8daf37b-bb2b-3503-b539-024d4f512724.json
deleted file mode 100644
index 9c3f7fa..0000000
--- a/test/data/enm/study-FCSV-f8daf37b-bb2b-3503-b539-024d4f512724.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-f8daf37b-bb2b-3503-b539-024d4f512724",
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
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- "effects": [
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- "conditions": {
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- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.106,
- "errQualifier": "sd",
- "errorValue": 0.015
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.1,
- "errQualifier": "sd",
- "errorValue": 0.005
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f8e73904-7d8c-37a1-b091-58c4706dff3f.json b/test/data/enm/study-FCSV-f8e73904-7d8c-37a1-b091-58c4706dff3f.json
deleted file mode 100644
index cf1be27..0000000
--- a/test/data/enm/study-FCSV-f8e73904-7d8c-37a1-b091-58c4706dff3f.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-f8e73904-7d8c-37a1-b091-58c4706dff3f",
- "owner": {
- "substance": {
- "uuid": "FCSV-eec391e5-065c-32c1-89ca-3eb40260c1a8"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
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- "reliability": {
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- "endpoint": "ATOMIC COMPOSITION",
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- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Ag]"
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- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-f908f459-38a9-3233-814d-c32bfd13b2cd.json b/test/data/enm/study-FCSV-f908f459-38a9-3233-814d-c32bfd13b2cd.json
deleted file mode 100644
index 5dd95cb..0000000
--- a/test/data/enm/study-FCSV-f908f459-38a9-3233-814d-c32bfd13b2cd.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-f908f459-38a9-3233-814d-c32bfd13b2cd",
- "owner": {
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- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
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- "testmat_form": null
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- "reliability": {
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- "TYPE": {
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- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
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- ]
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diff --git a/test/data/enm/study-FCSV-f94704cf-6cf3-36f6-9033-a0145d2503e2.json b/test/data/enm/study-FCSV-f94704cf-6cf3-36f6-9033-a0145d2503e2.json
deleted file mode 100644
index 328cb78..0000000
--- a/test/data/enm/study-FCSV-f94704cf-6cf3-36f6-9033-a0145d2503e2.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-f94704cf-6cf3-36f6-9033-a0145d2503e2",
- "owner": {
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- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
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- "TYPE": {
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- },
- "result": {
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- "textValue": "11-Amino-1-undecanethiol"
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- ]
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diff --git a/test/data/enm/study-FCSV-f97ae05b-a17c-3728-add7-43957623ba89.json b/test/data/enm/study-FCSV-f97ae05b-a17c-3728-add7-43957623ba89.json
deleted file mode 100644
index 6564de0..0000000
--- a/test/data/enm/study-FCSV-f97ae05b-a17c-3728-add7-43957623ba89.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-f97ae05b-a17c-3728-add7-43957623ba89",
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- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
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- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
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- "result": {
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- "loQualifier": "mean",
- "loValue": 0.099,
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- {
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- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 0.086,
- "errQualifier": "sd",
- "errorValue": 0.029
- }
- }
- ]
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diff --git a/test/data/enm/study-FCSV-f9d8b546-5a63-33a5-8bbb-8a6ccec0d47d.json b/test/data/enm/study-FCSV-f9d8b546-5a63-33a5-8bbb-8a6ccec0d47d.json
deleted file mode 100644
index f498bdd..0000000
--- a/test/data/enm/study-FCSV-f9d8b546-5a63-33a5-8bbb-8a6ccec0d47d.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-f9d8b546-5a63-33a5-8bbb-8a6ccec0d47d",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
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- "r_isUsedforClassification": "false",
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- },
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- "effects": [
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- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -17.77,
- "errQualifier": "sd",
- "errorValue": 5.04
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -5.68,
- "errQualifier": "sd",
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- }
- }
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diff --git a/test/data/enm/study-FCSV-fa042e92-1d94-3fa2-9f98-a55f51a7a4c7.json b/test/data/enm/study-FCSV-fa042e92-1d94-3fa2-9f98-a55f51a7a4c7.json
deleted file mode 100644
index 103d2f1..0000000
--- a/test/data/enm/study-FCSV-fa042e92-1d94-3fa2-9f98-a55f51a7a4c7.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-fa042e92-1d94-3fa2-9f98-a55f51a7a4c7",
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
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- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 40.4,
- "errQualifier": "sd",
- "errorValue": 0.66
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
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- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 53.24,
- "errQualifier": "sd",
- "errorValue": 2.42
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 35.08,
- "errQualifier": "sd",
- "errorValue": 8.48
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20.8,
- "errQualifier": "sd",
- "errorValue": 4.91
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 45.15,
- "errQualifier": "sd",
- "errorValue": 10.2
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 15.37,
- "errQualifier": "sd",
- "errorValue": 1.46
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 45.15,
- "errQualifier": "sd",
- "errorValue": 1.27
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 69.68,
- "errQualifier": "sd",
- "errorValue": 11.98
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fa4cc34f-420c-3af6-abb4-5536ef344006.json b/test/data/enm/study-FCSV-fa4cc34f-420c-3af6-abb4-5536ef344006.json
deleted file mode 100644
index 1faaa0e..0000000
--- a/test/data/enm/study-FCSV-fa4cc34f-420c-3af6-abb4-5536ef344006.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-fa4cc34f-420c-3af6-abb4-5536ef344006",
- "owner": {
- "substance": {
- "uuid": "FCSV-0588dd9b-6227-307f-9e6a-6b07d4717e8c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.26 Nanomaterial crystallite and grain size"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.284,
- "errQualifier": "sd",
- "errorValue": 0.052
- }
- },
- {
- "endpoint": "Polydispersity index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 0.289,
- "errQualifier": "sd",
- "errorValue": 0.008
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fa5fd4e2-1cfd-3363-a78b-a8b0f664fac1.json b/test/data/enm/study-FCSV-fa5fd4e2-1cfd-3363-a78b-a8b0f664fac1.json
deleted file mode 100644
index 45dcc98..0000000
--- a/test/data/enm/study-FCSV-fa5fd4e2-1cfd-3363-a78b-a8b0f664fac1.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-fa5fd4e2-1cfd-3363-a78b-a8b0f664fac1",
- "owner": {
- "substance": {
- "uuid": "FCSV-ae94c9b5-ffeb-3b3b-8464-1dfe3dbde073"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
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- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 0.21,
- "errQualifier": "sd",
- "errorValue": 0.0001953
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.293,
- "errQualifier": "sd",
- "errorValue": 0.014
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 517.68,
- "errQualifier": "sd",
- "errorValue": 0.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-faa280e4-1746-3998-b9d2-1e6b26a47346.json b/test/data/enm/study-FCSV-faa280e4-1746-3998-b9d2-1e6b26a47346.json
deleted file mode 100644
index 545d2b4..0000000
--- a/test/data/enm/study-FCSV-faa280e4-1746-3998-b9d2-1e6b26a47346.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-faa280e4-1746-3998-b9d2-1e6b26a47346",
- "owner": {
- "substance": {
- "uuid": "FCSV-9505d90b-f90b-3c94-a6cc-e4ee4c8ec46f"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.005,
- "errQualifier": "sd",
- "errorValue": 0.001
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -7.675,
- "errQualifier": "std",
- "errorValue": 0.321
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fabc5d67-2d15-3ac6-8bee-bf4ba1adb18d.json b/test/data/enm/study-FCSV-fabc5d67-2d15-3ac6-8bee-bf4ba1adb18d.json
deleted file mode 100644
index 0a4dd58..0000000
--- a/test/data/enm/study-FCSV-fabc5d67-2d15-3ac6-8bee-bf4ba1adb18d.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-fabc5d67-2d15-3ac6-8bee-bf4ba1adb18d",
- "owner": {
- "substance": {
- "uuid": "FCSV-ded649fa-97e1-3ec6-bb3d-623506389ee0"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
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- "effects": [
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- "endpoint": "Z-Average Hydrodynamic Diameter",
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- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
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- "loQualifier": "mean",
- "loValue": 72.45,
- "errQualifier": "sd",
- "errorValue": 2.55
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 100.75,
- "errQualifier": "sd",
- "errorValue": 4.37
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 131.05,
- "errQualifier": "sd",
- "errorValue": 106.94
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 94.79,
- "errQualifier": "sd",
- "errorValue": 24.2
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 81.11,
- "errQualifier": "sd",
- "errorValue": 3.37
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 82.21,
- "errQualifier": "sd",
- "errorValue": 24.36
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 81.11,
- "errQualifier": "sd",
- "errorValue": 13.29
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 107.09,
- "errQualifier": "sd",
- "errorValue": 5.81
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fabda6a5-fd69-3ad3-ab19-06679c2d007a.json b/test/data/enm/study-FCSV-fabda6a5-fd69-3ad3-ab19-06679c2d007a.json
deleted file mode 100644
index 191870d..0000000
--- a/test/data/enm/study-FCSV-fabda6a5-fd69-3ad3-ab19-06679c2d007a.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-fabda6a5-fd69-3ad3-ab19-06679c2d007a",
- "owner": {
- "substance": {
- "uuid": "FCSV-1a71d2b3-8121-3790-a66b-774b12829bb3"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-facda1fb-5ce1-300f-991e-c14c1f2e743e.json b/test/data/enm/study-FCSV-facda1fb-5ce1-300f-991e-c14c1f2e743e.json
deleted file mode 100644
index 9b3395a..0000000
--- a/test/data/enm/study-FCSV-facda1fb-5ce1-300f-991e-c14c1f2e743e.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-facda1fb-5ce1-300f-991e-c14c1f2e743e",
- "owner": {
- "substance": {
- "uuid": "FCSV-80a36fc5-9a73-358c-829b-2e69eea82125"
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.002,
- "errQualifier": "sd",
- "errorValue": 0.002
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -8.786,
- "errQualifier": "std",
- "errorValue": 1.283
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fad29dbf-bf5c-3bbf-b7ec-88a2adb1b3df.json b/test/data/enm/study-FCSV-fad29dbf-bf5c-3bbf-b7ec-88a2adb1b3df.json
deleted file mode 100644
index 9e5e82b..0000000
--- a/test/data/enm/study-FCSV-fad29dbf-bf5c-3bbf-b7ec-88a2adb1b3df.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-fad29dbf-bf5c-3bbf-b7ec-88a2adb1b3df",
- "owner": {
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- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 3.55,
- "errQualifier": "sd",
- "errorValue": 0.44
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fb11204e-7c00-3833-ac99-2d4552f65de1.json b/test/data/enm/study-FCSV-fb11204e-7c00-3833-ac99-2d4552f65de1.json
deleted file mode 100644
index 46dc5b9..0000000
--- a/test/data/enm/study-FCSV-fb11204e-7c00-3833-ac99-2d4552f65de1.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-fb11204e-7c00-3833-ac99-2d4552f65de1",
- "owner": {
- "substance": {
- "uuid": "FCSV-d6c56b3e-71a2-330b-92b6-9c90e6046eaa"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 43.59,
- "errQualifier": "sd",
- "errorValue": 0.9
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 60.9,
- "errQualifier": "sd",
- "errorValue": 2.05
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 43.89,
- "errQualifier": "sd",
- "errorValue": 1.12
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 93.1,
- "errQualifier": "sd",
- "errorValue": 79.26
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 45.87,
- "errQualifier": "sd",
- "errorValue": 1.35
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 46.89,
- "errQualifier": "sd",
- "errorValue": 9.33
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 45.87,
- "errQualifier": "sd",
- "errorValue": 0.8
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 77.13,
- "errQualifier": "sd",
- "errorValue": 15.76
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fb4f098c-e631-3bd9-bbf7-f3ee6e70756d.json b/test/data/enm/study-FCSV-fb4f098c-e631-3bd9-bbf7-f3ee6e70756d.json
deleted file mode 100644
index 63c3d86..0000000
--- a/test/data/enm/study-FCSV-fb4f098c-e631-3bd9-bbf7-f3ee6e70756d.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-fb4f098c-e631-3bd9-bbf7-f3ee6e70756d",
- "owner": {
- "substance": {
- "uuid": "FCSV-0542c513-7015-3169-a1c1-e00f811a7ba0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.476,
- "errQualifier": "sd",
- "errorValue": 0.32
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fbf7945b-143d-3838-958d-504eefff1270.json b/test/data/enm/study-FCSV-fbf7945b-143d-3838-958d-504eefff1270.json
deleted file mode 100644
index b5b7575..0000000
--- a/test/data/enm/study-FCSV-fbf7945b-143d-3838-958d-504eefff1270.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-fbf7945b-143d-3838-958d-504eefff1270",
- "owner": {
- "substance": {
- "uuid": "FCSV-ceed5aa6-a62e-3202-9bcf-702a94d34785"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fc4ce3f1-487a-308b-be6a-c04bb6a46d99.json b/test/data/enm/study-FCSV-fc4ce3f1-487a-308b-be6a-c04bb6a46d99.json
deleted file mode 100644
index b1c0363..0000000
--- a/test/data/enm/study-FCSV-fc4ce3f1-487a-308b-be6a-c04bb6a46d99.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-fc4ce3f1-487a-308b-be6a-c04bb6a46d99",
- "owner": {
- "substance": {
- "uuid": "FCSV-fb5e6048-8ee1-351d-915b-d1669681357e"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 257.832,
- "errQualifier": "sd",
- "errorValue": 30.368
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.009
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fc70adf1-c42b-3a90-9437-a73ce3cae3c9.json b/test/data/enm/study-FCSV-fc70adf1-c42b-3a90-9437-a73ce3cae3c9.json
deleted file mode 100644
index 56cac46..0000000
--- a/test/data/enm/study-FCSV-fc70adf1-c42b-3a90-9437-a73ce3cae3c9.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-fc70adf1-c42b-3a90-9437-a73ce3cae3c9",
- "owner": {
- "substance": {
- "uuid": "FCSV-130b04ab-86e6-38d6-9276-e2db1b4dcffb"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 508.521,
- "errQualifier": "sd",
- "errorValue": 43.717
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.064
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fc81ca0a-7b41-354a-801b-ee7a21d0ac3b.json b/test/data/enm/study-FCSV-fc81ca0a-7b41-354a-801b-ee7a21d0ac3b.json
deleted file mode 100644
index dcfb1c7..0000000
--- a/test/data/enm/study-FCSV-fc81ca0a-7b41-354a-801b-ee7a21d0ac3b.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-fc81ca0a-7b41-354a-801b-ee7a21d0ac3b",
- "owner": {
- "substance": {
- "uuid": "FCSV-ff7d2c8c-3d2f-316a-b890-6f9e7d88df4c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 2.035,
- "errQualifier": "sd",
- "errorValue": 0.486
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fc9c0a2c-479b-3ba5-9048-137b94e16557.json b/test/data/enm/study-FCSV-fc9c0a2c-479b-3ba5-9048-137b94e16557.json
deleted file mode 100644
index c69f7ee..0000000
--- a/test/data/enm/study-FCSV-fc9c0a2c-479b-3ba5-9048-137b94e16557.json
+++ /dev/null
@@ -1,114 +0,0 @@
-{
- "uuid": "FCSV-fc9c0a2c-479b-3ba5-9048-137b94e16557",
- "owner": {
- "substance": {
- "uuid": "FCSV-de7a4a31-ee94-313e-bfc4-acc11f0b56ec"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "TEM",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Tecnai 20 (FEI) microscope;Tecnai 20 (FEI) microscope;AMT 16000 camera",
- "Type of method": "TEM",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Core size",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 38.4,
- "errQualifier": "sd",
- "errorValue": 2.5
- }
- },
- {
- "endpoint": "Density",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/cm^3",
- "loQualifier": "",
- "loValue": 10.5
- }
- },
- {
- "endpoint": "MW",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "g/mol",
- "loQualifier": "",
- "loValue": 108
- }
- },
- {
- "endpoint": "Mol/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "",
- "loQualifier": "",
- "loValue": 0.0
- }
- },
- {
- "endpoint": "SA/NP",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "cm^2/NP",
- "loQualifier": "",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fca5ddde-dad3-3682-9116-e43fe52af3b2.json b/test/data/enm/study-FCSV-fca5ddde-dad3-3682-9116-e43fe52af3b2.json
deleted file mode 100644
index cd8af0a..0000000
--- a/test/data/enm/study-FCSV-fca5ddde-dad3-3682-9116-e43fe52af3b2.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-fca5ddde-dad3-3682-9116-e43fe52af3b2",
- "owner": {
- "substance": {
- "uuid": "FCSV-9df9ed76-5f94-3ecb-b661-a56e168a71bf"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 234.845,
- "errQualifier": "sd",
- "errorValue": 0.332
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.002
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fd148a7f-b3e9-3fb4-a4c9-7541c2416a0a.json b/test/data/enm/study-FCSV-fd148a7f-b3e9-3fb4-a4c9-7541c2416a0a.json
deleted file mode 100644
index 0c5a23a..0000000
--- a/test/data/enm/study-FCSV-fd148a7f-b3e9-3fb4-a4c9-7541c2416a0a.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-fd148a7f-b3e9-3fb4-a4c9-7541c2416a0a",
- "owner": {
- "substance": {
- "uuid": "FCSV-3c5fb4b0-2e4e-3dae-9eb2-1dbfd202cd13"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 271.604,
- "errQualifier": "sd",
- "errorValue": 15.114
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 1,
- "errQualifier": "sem",
- "errorValue": 0.071
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fd4a2814-b9df-338b-b571-8a7500628983.json b/test/data/enm/study-FCSV-fd4a2814-b9df-338b-b571-8a7500628983.json
deleted file mode 100644
index e63d792..0000000
--- a/test/data/enm/study-FCSV-fd4a2814-b9df-338b-b571-8a7500628983.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-fd4a2814-b9df-338b-b571-8a7500628983",
- "owner": {
- "substance": {
- "uuid": "FCSV-ae94c9b5-ffeb-3b3b-8464-1dfe3dbde073"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 272.769,
- "errQualifier": "sd",
- "errorValue": 3.323
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 11,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.013
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fdaa21d2-36e8-3e34-bb72-e32cce4212c7.json b/test/data/enm/study-FCSV-fdaa21d2-36e8-3e34-bb72-e32cce4212c7.json
deleted file mode 100644
index 640c4f2..0000000
--- a/test/data/enm/study-FCSV-fdaa21d2-36e8-3e34-bb72-e32cce4212c7.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-fdaa21d2-36e8-3e34-bb72-e32cce4212c7",
- "owner": {
- "substance": {
- "uuid": "FCSV-4683cde2-ec2e-3a2e-974a-3ba15cd79d05"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Ag]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fdd959ad-00df-3a0a-b755-afa14c7c011e.json b/test/data/enm/study-FCSV-fdd959ad-00df-3a0a-b755-afa14c7c011e.json
deleted file mode 100644
index ebadbe5..0000000
--- a/test/data/enm/study-FCSV-fdd959ad-00df-3a0a-b755-afa14c7c011e.json
+++ /dev/null
@@ -1,86 +0,0 @@
-{
- "uuid": "FCSV-fdd959ad-00df-3a0a-b755-afa14c7c011e",
- "owner": {
- "substance": {
- "uuid": "FCSV-0588dd9b-6227-307f-9e6a-6b07d4717e8c"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Absorbance.spectrophotometry.AS.",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "UV-1601PC absorbance spectrophotometer (Shimadzu)",
- "Type of method": "Absorbance.spectrophotometry.AS.",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.304,
- "errQualifier": "sd",
- "errorValue": 0.069
- }
- },
- {
- "endpoint": "Localized Surface Plasmon Resonance (LSPR) index",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": 0.451,
- "errQualifier": "sd",
- "errorValue": 0.013
- }
- },
- {
- "endpoint": "LSPR peak position (nm)",
- "conditions": {
- "MEDIUM": " "
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 518.67,
- "errQualifier": "sd",
- "errorValue": 1.29
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fe0a51cd-121d-3dd9-9ca4-3094a6eda4b3.json b/test/data/enm/study-FCSV-fe0a51cd-121d-3dd9-9ca4-3094a6eda4b3.json
deleted file mode 100644
index 6648f03..0000000
--- a/test/data/enm/study-FCSV-fe0a51cd-121d-3dd9-9ca4-3094a6eda4b3.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-fe0a51cd-121d-3dd9-9ca4-3094a6eda4b3",
- "owner": {
- "substance": {
- "uuid": "FCSV-cf1d4fd3-f16b-3680-96fa-0f5e4b9dd485"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.596,
- "errQualifier": "sd",
- "errorValue": 0.347
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fe58966e-942d-3ae1-a6d8-4a4cc46514d4.json b/test/data/enm/study-FCSV-fe58966e-942d-3ae1-a6d8-4a4cc46514d4.json
deleted file mode 100644
index f10f1fd..0000000
--- a/test/data/enm/study-FCSV-fe58966e-942d-3ae1-a6d8-4a4cc46514d4.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-fe58966e-942d-3ae1-a6d8-4a4cc46514d4",
- "owner": {
- "substance": {
- "uuid": "FCSV-9a56b1e5-2e22-31c4-b979-e8e9fee728c6"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fe601d8d-c5e0-3c1a-8c6c-185d6a8503e0.json b/test/data/enm/study-FCSV-fe601d8d-c5e0-3c1a-8c6c-185d6a8503e0.json
deleted file mode 100644
index ec78570..0000000
--- a/test/data/enm/study-FCSV-fe601d8d-c5e0-3c1a-8c6c-185d6a8503e0.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-fe601d8d-c5e0-3c1a-8c6c-185d6a8503e0",
- "owner": {
- "substance": {
- "uuid": "FCSV-8619e6db-2c01-389e-b05b-e75273d18359"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 444.358,
- "errQualifier": "sd",
- "errorValue": 2.619
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 9,
- "errQualifier": "sd",
- "errorValue": 0.0
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.016
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fe64d3f4-a889-3a69-b9f7-d8150979973c.json b/test/data/enm/study-FCSV-fe64d3f4-a889-3a69-b9f7-d8150979973c.json
deleted file mode 100644
index c4c7a2d..0000000
--- a/test/data/enm/study-FCSV-fe64d3f4-a889-3a69-b9f7-d8150979973c.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-fe64d3f4-a889-3a69-b9f7-d8150979973c",
- "owner": {
- "substance": {
- "uuid": "FCSV-aab0ef77-8a71-36d7-9185-d2f76b9e3567"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 36.7,
- "errQualifier": "sd",
- "errorValue": 0.56
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 53.12,
- "errQualifier": "sd",
- "errorValue": 3.19
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 34.45,
- "errQualifier": "sd",
- "errorValue": 2.52
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 43.83,
- "errQualifier": "sd",
- "errorValue": 4.76
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 40.24,
- "errQualifier": "sd",
- "errorValue": 3.02
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 39.24,
- "errQualifier": "sd",
- "errorValue": 5.75
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 40.24,
- "errQualifier": "sd",
- "errorValue": 3.39
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 58.53,
- "errQualifier": "sd",
- "errorValue": 1.69
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fe7c91b9-fdbd-3d87-9625-0c424f1069cd.json b/test/data/enm/study-FCSV-fe7c91b9-fdbd-3d87-9625-0c424f1069cd.json
deleted file mode 100644
index 93112e8..0000000
--- a/test/data/enm/study-FCSV-fe7c91b9-fdbd-3d87-9625-0c424f1069cd.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-fe7c91b9-fdbd-3d87-9625-0c424f1069cd",
- "owner": {
- "substance": {
- "uuid": "FCSV-d6c56b3e-71a2-330b-92b6-9c90e6046eaa"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fe8bcaee-7e6a-3007-a05f-7494e419a5ff.json b/test/data/enm/study-FCSV-fe8bcaee-7e6a-3007-a05f-7494e419a5ff.json
deleted file mode 100644
index a57707d..0000000
--- a/test/data/enm/study-FCSV-fe8bcaee-7e6a-3007-a05f-7494e419a5ff.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-fe8bcaee-7e6a-3007-a05f-7494e419a5ff",
- "owner": {
- "substance": {
- "uuid": "FCSV-1842b3a2-413c-327c-a07a-9905269bafb5"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 960.682,
- "errQualifier": "sd",
- "errorValue": 59.8
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 0.0,
- "errQualifier": "sem",
- "errorValue": 0.039
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fe8ecf8c-598a-317a-a1c6-c4c68ce8d41f.json b/test/data/enm/study-FCSV-fe8ecf8c-598a-317a-a1c6-c4c68ce8d41f.json
deleted file mode 100644
index 8ff95e9..0000000
--- a/test/data/enm/study-FCSV-fe8ecf8c-598a-317a-a1c6-c4c68ce8d41f.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "FCSV-fe8ecf8c-598a-317a-a1c6-c4c68ce8d41f",
- "owner": {
- "substance": {
- "uuid": "FCSV-50aee86c-a3a2-3c46-86bf-5ac25485fc13"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Bicinchoninic Acid (BCA) Assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Total protein (BCA assay)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug",
- "loQualifier": "mean",
- "loValue": 0.622,
- "errQualifier": "sd",
- "errorValue": 0.615
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fed44575-1149-3edd-b60c-3fd3198a70f5.json b/test/data/enm/study-FCSV-fed44575-1149-3edd-b60c-3fd3198a70f5.json
deleted file mode 100644
index a4c0648..0000000
--- a/test/data/enm/study-FCSV-fed44575-1149-3edd-b60c-3fd3198a70f5.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "FCSV-fed44575-1149-3edd-b60c-3fd3198a70f5",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc2c755f-9eee-30e3-9e98-1fbb2397c980"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "ICP-AES",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "Perkin-Elmer",
- "Type of method": "ICP-AES",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "Net cell association",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "mL/ug(Mg)",
- "loQualifier": "mean",
- "loValue": 0.043,
- "errQualifier": "sd",
- "errorValue": 0.027
- }
- },
- {
- "endpoint": "Log2 transformed",
- "conditions": {
- "Cell": "A549"
- },
- "result": {
- "unit": "",
- "loQualifier": "mean",
- "loValue": -4.555,
- "errQualifier": "std",
- "errorValue": 0.907
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-feec98d2-1cbf-35fe-9e7e-74c29419bffb.json b/test/data/enm/study-FCSV-feec98d2-1cbf-35fe-9e7e-74c29419bffb.json
deleted file mode 100644
index 8537234..0000000
--- a/test/data/enm/study-FCSV-feec98d2-1cbf-35fe-9e7e-74c29419bffb.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-feec98d2-1cbf-35fe-9e7e-74c29419bffb",
- "owner": {
- "substance": {
- "uuid": "FCSV-3adf8c83-83b1-3ffa-8868-b8527d83923b"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": 24.34,
- "errQualifier": "sd",
- "errorValue": 1.8
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -7.94,
- "errQualifier": "sd",
- "errorValue": 2.12
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-fef12269-a821-39fa-a27b-cfc79cf3e4a1.json b/test/data/enm/study-FCSV-fef12269-a821-39fa-a27b-cfc79cf3e4a1.json
deleted file mode 100644
index 80bcd82..0000000
--- a/test/data/enm/study-FCSV-fef12269-a821-39fa-a27b-cfc79cf3e4a1.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-fef12269-a821-39fa-a27b-cfc79cf3e4a1",
- "owner": {
- "substance": {
- "uuid": "FCSV-2ed7ebf8-d11d-3f39-8f05-b0132ec4d7e0"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -2.31,
- "errQualifier": "sd",
- "errorValue": 0.93
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -3.58,
- "errQualifier": "sd",
- "errorValue": 3.24
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ff2c239d-6cef-3fef-9127-1d2ece5e829a.json b/test/data/enm/study-FCSV-ff2c239d-6cef-3fef-9127-1d2ece5e829a.json
deleted file mode 100644
index 3c601fc..0000000
--- a/test/data/enm/study-FCSV-ff2c239d-6cef-3fef-9127-1d2ece5e829a.json
+++ /dev/null
@@ -1,77 +0,0 @@
-{
- "uuid": "FCSV-ff2c239d-6cef-3fef-9127-1d2ece5e829a",
- "owner": {
- "substance": {
- "uuid": "FCSV-2de5071e-596b-3507-84fc-f9ba470cbcbf"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": " ",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": 19.01,
- "errQualifier": "sd",
- "errorValue": 3.91
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loQualifier": "mean",
- "loValue": -5.64,
- "errQualifier": "sd",
- "errorValue": 0.44
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ff43c20e-cbe2-359c-8283-e87c573886ae.json b/test/data/enm/study-FCSV-ff43c20e-cbe2-359c-8283-e87c573886ae.json
deleted file mode 100644
index 904ed19..0000000
--- a/test/data/enm/study-FCSV-ff43c20e-cbe2-359c-8283-e87c573886ae.json
+++ /dev/null
@@ -1,85 +0,0 @@
-{
- "uuid": "FCSV-ff43c20e-cbe2-359c-8283-e87c573886ae",
- "owner": {
- "substance": {
- "uuid": "FCSV-a7dbc5da-6ccd-3df5-b2f1-467f625a08cb"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_UNKNOWN_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.99 Physico chemical properties (other)"
- },
- "endpoint": "Ellman depletion assay",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "Type of method": "Serum.density",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Autot (ICP-AES)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "nmol",
- "loQualifier": "mean",
- "loValue": 630.64,
- "errQualifier": "sd",
- "errorValue": 37.541
- }
- },
- {
- "endpoint": "Total surface area (SAtot)",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "cm^2",
- "loQualifier": "mean",
- "loValue": 10,
- "errQualifier": "sd",
- "errorValue": 1
- }
- },
- {
- "endpoint": "Protein density",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)"
- },
- "result": {
- "unit": "ug/cm^2",
- "loQualifier": "mean",
- "loValue": 1,
- "errQualifier": "sem",
- "errorValue": 0.049
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ff7c5306-71cd-383e-aacd-96d251f34d0b.json b/test/data/enm/study-FCSV-ff7c5306-71cd-383e-aacd-96d251f34d0b.json
deleted file mode 100644
index 1825887..0000000
--- a/test/data/enm/study-FCSV-ff7c5306-71cd-383e-aacd-96d251f34d0b.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "FCSV-ff7c5306-71cd-383e-aacd-96d251f34d0b",
- "owner": {
- "substance": {
- "uuid": "FCSV-5b29295c-f2ab-3e5a-bb32-37caac38b002"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Description",
- "guideline": [
- "Description"
- ]
- },
- "parameters": {
- "Type of method": null,
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": null,
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "[Au]"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-FCSV-ff92640c-4229-35e3-aede-d7a8f36ee365.json b/test/data/enm/study-FCSV-ff92640c-4229-35e3-aede-d7a8f36ee365.json
deleted file mode 100644
index 75e4c25..0000000
--- a/test/data/enm/study-FCSV-ff92640c-4229-35e3-aede-d7a8f36ee365.json
+++ /dev/null
@@ -1,169 +0,0 @@
-{
- "uuid": "FCSV-ff92640c-4229-35e3-aede-d7a8f36ee365",
- "owner": {
- "substance": {
- "uuid": "FCSV-bc77c03d-4e75-3fab-bb3d-17b983663819"
- },
- "company": {
- "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319",
- "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv"
- }
- },
- "citation": {
- "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv",
- "year": "2014",
- "owner": null
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "DLS",
- "guideline": [
- "doi: 10.1021/nn406018q"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)",
- "Type of method": "DLS",
- "testmat_form": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 22.36,
- "errQualifier": "sd",
- "errorValue": 0.94
- }
- },
- {
- "endpoint": "Z-Average Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": "mean",
- "loValue": 57.53,
- "errQualifier": "sd",
- "errorValue": 2.05
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 21.94,
- "errQualifier": "sd",
- "errorValue": 0.08
- }
- },
- {
- "endpoint": "Volume Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 21.75,
- "errQualifier": "sd",
- "errorValue": 17.23
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23.49,
- "errQualifier": "sd",
- "errorValue": 0.48
- }
- },
- {
- "endpoint": "Number Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 18.38,
- "errQualifier": "sd",
- "errorValue": 14.53
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": " ",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23.49,
- "errQualifier": "sd",
- "errorValue": 0.75
- }
- },
- {
- "endpoint": "Intensity Mean Hydrodynamic Diameter",
- "conditions": {
- "MEDIUM": "Human serum (Sigma #H4522)",
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 70.97,
- "errQualifier": "sd",
- "errorValue": 7.26
- }
- }
- ]
-}
diff --git a/test/data/enm/study-IUC5-49179f2f-867c-4e7c-8fd1-d09eb23c4c3d.json b/test/data/enm/study-IUC5-49179f2f-867c-4e7c-8fd1-d09eb23c4c3d.json
deleted file mode 100644
index 9285fed..0000000
--- a/test/data/enm/study-IUC5-49179f2f-867c-4e7c-8fd1-d09eb23c4c3d.json
+++ /dev/null
@@ -1,68 +0,0 @@
-{
- "uuid": "IUC5-49179f2f-867c-4e7c-8fd1-d09eb23c4c3d",
- "owner": {
- "substance": {
- "uuid": "IUC5-5f313d1f-4129-499c-abbe-ac18642e2471"
- },
- "company": {
- "uuid": "IUC5-354430c7-746e-450e-9722-09788eb90a29",
- "name": "Ideaconsult Ltd. / Sofia / Bulgaria"
- }
- },
- "citation": {
- "title": null,
- "year": "2006",
- "owner": ""
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "TO_ACUTE_ORAL_SECTION",
- "term": "http://purl.enanomapper.org/onto/ENM_0000020",
- "title": "7.2.1 Acute toxicity - oral"
- },
- "endpoint": "Acute toxicity: oral.001",
- "guideline": [
- "OECD Guideline 423 (Acute Oral toxicity - Acute Toxic Class Method)"
- ]
- },
- "parameters": {
- "Sex": "female",
- "Species": "rat"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": "key study",
- "r_studyResultType": "experimental result",
- "r_value": "1 (reliable without restriction)"
- },
- "interpretation": {
- "result": "practically nontoxic"
- },
- "effects": [
- {
- "endpoint": "LDLo",
- "conditions": {
- "Sex": "female"
- },
- "result": {
- "unit": "mg/kg bw",
- "loQualifier": ">=",
- "loValue": 2000
- }
- },
- {
- "endpoint": "LD50 cut-off ",
- "conditions": {
- "Sex": "female"
- },
- "result": {
- "unit": "mg/kg bw",
- "loQualifier": ">=",
- "loValue": 5000
- }
- }
- ]
-}
diff --git a/test/data/enm/study-IUC5-4bca14fc-3e43-435e-a06e-d924fc77bded.json b/test/data/enm/study-IUC5-4bca14fc-3e43-435e-a06e-d924fc77bded.json
deleted file mode 100644
index edea576..0000000
--- a/test/data/enm/study-IUC5-4bca14fc-3e43-435e-a06e-d924fc77bded.json
+++ /dev/null
@@ -1,115 +0,0 @@
-{
- "uuid": "IUC5-4bca14fc-3e43-435e-a06e-d924fc77bded",
- "owner": {
- "substance": {
- "uuid": "IUC5-5f313d1f-4129-499c-abbe-ac18642e2471"
- },
- "company": {
- "uuid": "IUC5-354430c7-746e-450e-9722-09788eb90a29",
- "name": "Ideaconsult Ltd. / Sofia / Bulgaria"
- }
- },
- "citation": {
- "title": null,
- "year": "2011",
- "owner": ""
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle size distribution (Granulometry).001",
- "guideline": [
- "Transmission Electron Microscopy (TEM)"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": "imaging technique",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": "key study",
- "r_studyResultType": "experimental result",
- "r_value": "2 (reliable with restrictions)"
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN DIAMETER",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": {
- "loValue": null
- },
- "SEQ_NUM": {
- "loValue": null
- },
- "STD_DEV": {
- "loValue": null
- }
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 3,
- "upQualifier": "<",
- "upValue": 20
- }
- },
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": null,
- "Remark": {
- "loValue": null
- },
- "SEQ_NUM": {
- "loValue": null
- },
- "STD_DEV": {
- "Class": "GEOMETRIC STANDARD DEVIATION",
- "isResult": "true",
- "loQualifier": null,
- "loValue": null,
- "upQualifier": null
- }
- },
- "result": {
- "unit": null
- }
- },
- {
- "endpoint": "PARTICLE SIZE.D90",
- "conditions": {
- "PHRASEOTHER_PERCENTILE": {
- "loQualifier": " ",
- "loValue": "D90"
- },
- "Remark": {
- "loValue": null
- },
- "SEQ_NUM": {
- "loValue": null
- },
- "STD_DEV": {
- "loValue": null
- }
- },
- "result": {
- "unit": "nm",
- "loQualifier": "",
- "loValue": 12.7,
- "upQualifier": "",
- "textValue": ""
- }
- }
- ]
-}
diff --git a/test/data/enm/study-IUC5-4d6e67a8-4301-4e6a-bafc-20e20fbaf2ad.json b/test/data/enm/study-IUC5-4d6e67a8-4301-4e6a-bafc-20e20fbaf2ad.json
deleted file mode 100644
index 0f97d05..0000000
--- a/test/data/enm/study-IUC5-4d6e67a8-4301-4e6a-bafc-20e20fbaf2ad.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "IUC5-4d6e67a8-4301-4e6a-bafc-20e20fbaf2ad",
- "owner": {
- "substance": {
- "uuid": "IUC5-5f313d1f-4129-499c-abbe-ac18642e2471"
- },
- "company": {
- "uuid": "IUC5-354430c7-746e-450e-9722-09788eb90a29",
- "name": "Ideaconsult Ltd. / Sofia / Bulgaria"
- }
- },
- "citation": {
- "title": null,
- "year": "2006",
- "owner": ""
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific surface area.001",
- "guideline": [
- "DIN66131"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": "BET"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": "key study",
- "r_studyResultType": "experimental result",
- "r_value": "2 (reliable with restrictions)"
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null,
- "STD_DEV": {
- }
- },
- "result": {
- "unit": "m²/g",
- "loQualifier": "",
- "loValue": 253,
- "upQualifier": ""
- }
- }
- ]
-}
diff --git a/test/data/enm/study-IUC5-6bdaad41-66c2-4d24-99ee-8d579243ddd9.json b/test/data/enm/study-IUC5-6bdaad41-66c2-4d24-99ee-8d579243ddd9.json
deleted file mode 100644
index c2d07ab..0000000
--- a/test/data/enm/study-IUC5-6bdaad41-66c2-4d24-99ee-8d579243ddd9.json
+++ /dev/null
@@ -1,71 +0,0 @@
-{
- "uuid": "IUC5-6bdaad41-66c2-4d24-99ee-8d579243ddd9",
- "owner": {
- "substance": {
- "uuid": "IUC5-5f313d1f-4129-499c-abbe-ac18642e2471"
- },
- "company": {
- "uuid": "IUC5-354430c7-746e-450e-9722-09788eb90a29",
- "name": "Ideaconsult Ltd. / Sofia / Bulgaria"
- }
- },
- "citation": {
- "title": "Thurnherr, T. et al.",
- "year": "2011",
- "owner": ""
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "TO_GENETIC_IN_VITRO_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002167",
- "title": "7.6.1 Genetic toxicity in vitro"
- },
- "endpoint": "Exp Supporting Genetic toxicity in vitro.008",
- "guideline": [
- null
- ]
- },
- "parameters": {
- "Metabolic activation system": null,
- "Species": "human pulmonary epithelial cell line A549",
- "Target gene": null,
- "Type of genotoxicity": "chromosome and DNA damage",
- "Type of study": "Micronucleus test in vitro (MNvit) and Comet assay in vitro"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": "supporting study",
- "r_studyResultType": "experimental result",
- "r_value": "other:"
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "GENOTOXICITY",
- "conditions": {
- "Metabolic activation": "without",
- "Species": "A549"
- },
- "result": {
- "unit": null,
- "textValue": "negative"
- }
- },
- {
- "endpoint": "GENOTOXICITY",
- "conditions": {
- "Metabolic activation": "without",
- "Species": "A549"
- },
- "result": {
- "unit": null,
- "textValue": "negative"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-IUC5-708684e4-4e3b-49cd-92ec-9fc2f3a4dc14.json b/test/data/enm/study-IUC5-708684e4-4e3b-49cd-92ec-9fc2f3a4dc14.json
deleted file mode 100644
index ecaa096..0000000
--- a/test/data/enm/study-IUC5-708684e4-4e3b-49cd-92ec-9fc2f3a4dc14.json
+++ /dev/null
@@ -1,129 +0,0 @@
-{
- "uuid": "IUC5-708684e4-4e3b-49cd-92ec-9fc2f3a4dc14",
- "owner": {
- "substance": {
- "uuid": "IUC5-5f313d1f-4129-499c-abbe-ac18642e2471"
- },
- "company": {
- "uuid": "IUC5-354430c7-746e-450e-9722-09788eb90a29",
- "name": "Ideaconsult Ltd. / Sofia / Bulgaria"
- }
- },
- "citation": {
- "title": null,
- "year": "2010",
- "owner": ""
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta potential.001",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": "key study",
- "r_studyResultType": "experimental result",
- "r_value": "2 (reliable with restrictions)"
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "STD_DEV": {
- "loValue": 2.9,
- "unit": ""
- },
- "pH": {
- "loValue": "1.9"
- }
- },
- "result": {
- "unit": "mV",
- "loQualifier": "",
- "loValue": 41.4,
- "upQualifier": ""
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "STD_DEV": {
- "loValue": 1.5,
- "unit": ""
- },
- "pH": {
- "loValue": "2.99"
- }
- },
- "result": {
- "unit": "mV",
- "loQualifier": "",
- "loValue": 39.3,
- "upQualifier": ""
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "STD_DEV": {
- "loValue": 6.5,
- "unit": ""
- },
- "pH": {
- "loValue": "4.26"
- }
- },
- "result": {
- "unit": "mV",
- "loQualifier": "",
- "loValue": 21.4,
- "upQualifier": ""
- }
- },
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "STD_DEV": {
- "loValue": 1.7,
- "unit": ""
- },
- "pH": {
- "loValue": "5.04"
- }
- },
- "result": {
- "unit": "mV",
- "loQualifier": "",
- "loValue": 34.5,
- "upQualifier": ""
- }
- }
- ]
-}
diff --git a/test/data/enm/study-IUC5-74e91cde-2ffa-43ec-8fcd-5d6407f1602c.json b/test/data/enm/study-IUC5-74e91cde-2ffa-43ec-8fcd-5d6407f1602c.json
deleted file mode 100644
index ec4e227..0000000
--- a/test/data/enm/study-IUC5-74e91cde-2ffa-43ec-8fcd-5d6407f1602c.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "IUC5-74e91cde-2ffa-43ec-8fcd-5d6407f1602c",
- "owner": {
- "substance": {
- "uuid": "IUC5-5f313d1f-4129-499c-abbe-ac18642e2471"
- },
- "company": {
- "uuid": "IUC5-354430c7-746e-450e-9722-09788eb90a29",
- "name": "Ideaconsult Ltd. / Sofia / Bulgaria"
- }
- },
- "citation": {
- "title": null,
- "year": "2008",
- "owner": ""
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "DUSTINESS_SECTION",
- "term": "http://purl.enanomapper.org/onto/ENM_9000003",
- "title": "4.31 Nanomaterial dustiness"
- },
- "endpoint": "Dustiness.001",
- "guideline": [
- "DIN 33897-2 (2002) Workplace atmospheres - Determination of the dustiness of bulk materials - Part 2:Continuous Drop (note: SUPERSEDED by EN 1505:2006)"
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": "continuous drop"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": "key study",
- "r_studyResultType": "experimental result",
- "r_value": ""
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "DUSTINESS INDEX",
- "conditions": {
- "STD_DEV": {
- }
- },
- "result": {
- "unit": null
- }
- }
- ]
-}
diff --git a/test/data/enm/study-IUC5-9db5f020-e0fa-47c8-8e61-3eeb8038e279.json b/test/data/enm/study-IUC5-9db5f020-e0fa-47c8-8e61-3eeb8038e279.json
deleted file mode 100644
index 1cab021..0000000
--- a/test/data/enm/study-IUC5-9db5f020-e0fa-47c8-8e61-3eeb8038e279.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "IUC5-9db5f020-e0fa-47c8-8e61-3eeb8038e279",
- "owner": {
- "substance": {
- "uuid": "IUC5-5f313d1f-4129-499c-abbe-ac18642e2471"
- },
- "company": {
- "uuid": "IUC5-354430c7-746e-450e-9722-09788eb90a29",
- "name": "Ideaconsult Ltd. / Sofia / Bulgaria"
- }
- },
- "citation": {
- "title": "Ragot J, Voetz M ",
- "year": "2010",
- "owner": ""
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "GI_GENERAL_INFORM_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.1 Appearance"
- },
- "endpoint": "Appearance/physical state/colour.001",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": "key study",
- "r_studyResultType": "experimental result",
- "r_value": "2 (reliable with restrictions)"
- },
- "interpretation": {
- "result": "inorganic"
- },
- "effects": [
- {
- "endpoint": "solid",
- "conditions": {
- "Remark": "nanomaterial"
- },
- "result": {
- "unit": null
- }
- }
- ]
-}
diff --git a/test/data/enm/study-IUC5-f6eb018b-2dc5-462b-be29-a6ffce0fd4d4.json b/test/data/enm/study-IUC5-f6eb018b-2dc5-462b-be29-a6ffce0fd4d4.json
deleted file mode 100644
index b393b4d..0000000
--- a/test/data/enm/study-IUC5-f6eb018b-2dc5-462b-be29-a6ffce0fd4d4.json
+++ /dev/null
@@ -1,54 +0,0 @@
-{
- "uuid": "IUC5-f6eb018b-2dc5-462b-be29-a6ffce0fd4d4",
- "owner": {
- "substance": {
- "uuid": "IUC5-5f313d1f-4129-499c-abbe-ac18642e2471"
- },
- "company": {
- "uuid": "IUC5-354430c7-746e-450e-9722-09788eb90a29",
- "name": "Ideaconsult Ltd. / Sofia / Bulgaria"
- }
- },
- "citation": {
- "title": "Muller, J. et al.",
- "year": "2009",
- "owner": ""
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "TO_CARCINOGENICITY_SECTION",
- "term": "http://purl.enanomapper.org/onto/ENM_0000029",
- "title": "7.7 Carcinogenicity"
- },
- "endpoint": "Carcinogenicity.001",
- "guideline": [
- null
- ]
- },
- "parameters": {
- "Doses/concentrations": "MWCNT+: 2 or 20 mg/animal;MWCNT-: 20 mg/animal;Crocidolite: 2 mg/animal",
- "Route of administration": "intraperitoneal",
- "Species": "rat"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": "key study",
- "r_studyResultType": "experimental result",
- "r_value": "2 (reliable with restrictions)"
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "",
- "conditions": {
- },
- "result": {
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-001eeffd-a257-4e01-9f59-cd7e4585bc43.json b/test/data/enm/study-NWKI-001eeffd-a257-4e01-9f59-cd7e4585bc43.json
deleted file mode 100644
index 467bacf..0000000
--- a/test/data/enm/study-NWKI-001eeffd-a257-4e01-9f59-cd7e4585bc43.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-001eeffd-a257-4e01-9f59-cd7e4585bc43",
- "owner": {
- "substance": {
- "uuid": "NWKI-90869553-c8fe-3ef6-8e68-47f392958127"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": 3.09
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0068416d-360e-4569-8529-b81e33d7879f.json b/test/data/enm/study-NWKI-0068416d-360e-4569-8529-b81e33d7879f.json
deleted file mode 100644
index 73d3608..0000000
--- a/test/data/enm/study-NWKI-0068416d-360e-4569-8529-b81e33d7879f.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-0068416d-360e-4569-8529-b81e33d7879f",
- "owner": {
- "substance": {
- "uuid": "NWKI-3481f716-18fa-39b3-aa54-4acb67877194"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 38
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-01254983-14c9-4ff4-a6ab-8a88470c4dc7.json b/test/data/enm/study-NWKI-01254983-14c9-4ff4-a6ab-8a88470c4dc7.json
deleted file mode 100644
index d6a0866..0000000
--- a/test/data/enm/study-NWKI-01254983-14c9-4ff4-a6ab-8a88470c4dc7.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-01254983-14c9-4ff4-a6ab-8a88470c4dc7",
- "owner": {
- "substance": {
- "uuid": "NWKI-8667bfb7-a5da-3eb0-b9d7-86e2c8f06f19"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 600,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 24
- }
- },
- "result": {
- "unit": null,
- "loValue": 96
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-01266bd1-a36a-47d2-bab4-a3fc99f296d4.json b/test/data/enm/study-NWKI-01266bd1-a36a-47d2-bab4-a3fc99f296d4.json
deleted file mode 100644
index b7f2026..0000000
--- a/test/data/enm/study-NWKI-01266bd1-a36a-47d2-bab4-a3fc99f296d4.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-01266bd1-a36a-47d2-bab4-a3fc99f296d4",
- "owner": {
- "substance": {
- "uuid": "NWKI-13b28611-c05b-325b-9e60-182c49b2a288"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es051043o",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002993_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002993",
- "title": "BAO_0002993 Cytotoxicity Assay"
- },
- "endpoint": "Concentration in cell",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Concentration_in_cell",
- "conditions": {
- "Concentration in culture medium": {
- "loValue": 100,
- "unit": "ng/g"
- },
- "Time": {
- "loValue": 1,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 18
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-01486dcf-1529-4177-87cc-3ac2968d7604.json b/test/data/enm/study-NWKI-01486dcf-1529-4177-87cc-3ac2968d7604.json
deleted file mode 100644
index 43dece6..0000000
--- a/test/data/enm/study-NWKI-01486dcf-1529-4177-87cc-3ac2968d7604.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-01486dcf-1529-4177-87cc-3ac2968d7604",
- "owner": {
- "substance": {
- "uuid": "NWKI-74c6a1ca-f415-3c86-9437-446299eb5e40"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -40.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-01a7905b-d076-404a-b426-406c5eab5b7c.json b/test/data/enm/study-NWKI-01a7905b-d076-404a-b426-406c5eab5b7c.json
deleted file mode 100644
index 5094ebd..0000000
--- a/test/data/enm/study-NWKI-01a7905b-d076-404a-b426-406c5eab5b7c.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-01a7905b-d076-404a-b426-406c5eab5b7c",
- "owner": {
- "substance": {
- "uuid": "NWKI-0d776d00-aec4-3a75-9eb3-453909fc50ed"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "ArabinoGalactanCoating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Arabino_Galactan"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Arabino_Galactan"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-01ce05e5-80aa-4d3f-84cb-44039ca74d22.json b/test/data/enm/study-NWKI-01ce05e5-80aa-4d3f-84cb-44039ca74d22.json
deleted file mode 100644
index c712f90..0000000
--- a/test/data/enm/study-NWKI-01ce05e5-80aa-4d3f-84cb-44039ca74d22.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-01ce05e5-80aa-4d3f-84cb-44039ca74d22",
- "owner": {
- "substance": {
- "uuid": "NWKI-37a99dad-2a53-3076-b21f-d078b89fb4fb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "SiO2"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "SiO2"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "APS_Coating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "APS"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "APS"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-02115f25-e680-41b1-b509-91a9aa73033f.json b/test/data/enm/study-NWKI-02115f25-e680-41b1-b509-91a9aa73033f.json
deleted file mode 100644
index 816c6ae..0000000
--- a/test/data/enm/study-NWKI-02115f25-e680-41b1-b509-91a9aa73033f.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-02115f25-e680-41b1-b509-91a9aa73033f",
- "owner": {
- "substance": {
- "uuid": "NWKI-6b8a44a2-b835-3f75-903c-cf0a71a247c9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es051043o",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 40,
- "upQualifier": "<=",
- "upValue": 80
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0225a419-5e74-4fa8-8939-a2cf688547c9.json b/test/data/enm/study-NWKI-0225a419-5e74-4fa8-8939-a2cf688547c9.json
deleted file mode 100644
index b0dda8a..0000000
--- a/test/data/enm/study-NWKI-0225a419-5e74-4fa8-8939-a2cf688547c9.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-0225a419-5e74-4fa8-8939-a2cf688547c9",
- "owner": {
- "substance": {
- "uuid": "NWKI-d52e3489-851d-3eeb-b887-9a595cc9adfe"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -66.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-02443f5b-63fc-40d4-82a7-d8fb8705d72e.json b/test/data/enm/study-NWKI-02443f5b-63fc-40d4-82a7-d8fb8705d72e.json
deleted file mode 100644
index 9a5695c..0000000
--- a/test/data/enm/study-NWKI-02443f5b-63fc-40d4-82a7-d8fb8705d72e.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-02443f5b-63fc-40d4-82a7-d8fb8705d72e",
- "owner": {
- "substance": {
- "uuid": "NWKI-8a968835-50ab-33df-bf5e-42de32d01c15"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Colon HT29",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 6,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 24
- }
- },
- "result": {
- "unit": null,
- "loValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-02e70892-6694-4917-abc4-04073abdfae8.json b/test/data/enm/study-NWKI-02e70892-6694-4917-abc4-04073abdfae8.json
deleted file mode 100644
index e80fe03..0000000
--- a/test/data/enm/study-NWKI-02e70892-6694-4917-abc4-04073abdfae8.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-02e70892-6694-4917-abc4-04073abdfae8",
- "owner": {
- "substance": {
- "uuid": "NWKI-a855e2c5-73f1-32c0-8a87-aa521fd69928"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1063/1.2061873",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0352bf48-fe8a-4121-a3c8-c996b2c7416b.json b/test/data/enm/study-NWKI-0352bf48-fe8a-4121-a3c8-c996b2c7416b.json
deleted file mode 100644
index f24636b..0000000
--- a/test/data/enm/study-NWKI-0352bf48-fe8a-4121-a3c8-c996b2c7416b.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-0352bf48-fe8a-4121-a3c8-c996b2c7416b",
- "owner": {
- "substance": {
- "uuid": "NWKI-1b7ce9a9-7e13-30d8-a5c2-f8008ba3c38f"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -72.6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-037a45cf-b93d-4621-a584-a77e5b4ed359.json b/test/data/enm/study-NWKI-037a45cf-b93d-4621-a584-a77e5b4ed359.json
deleted file mode 100644
index d068944..0000000
--- a/test/data/enm/study-NWKI-037a45cf-b93d-4621-a584-a77e5b4ed359.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-037a45cf-b93d-4621-a584-a77e5b4ed359",
- "owner": {
- "substance": {
- "uuid": "NWKI-674cfd7c-bc77-36c7-bbe0-d52dd0233d64"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1080/10934520600966177",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loQualifier": ">=",
- "loValue": 50,
- "upQualifier": "<=",
- "upValue": 245
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-03c2146b-f531-4e6e-9092-c1faf2894574.json b/test/data/enm/study-NWKI-03c2146b-f531-4e6e-9092-c1faf2894574.json
deleted file mode 100644
index 559aff2..0000000
--- a/test/data/enm/study-NWKI-03c2146b-f531-4e6e-9092-c1faf2894574.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-03c2146b-f531-4e6e-9092-c1faf2894574",
- "owner": {
- "substance": {
- "uuid": "NWKI-6cab56b4-69d9-36e0-8c17-f467d08b2555"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "COOH-2DPVA"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PVA"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-040aa132-1030-4a06-80a9-e70d75d68429.json b/test/data/enm/study-NWKI-040aa132-1030-4a06-80a9-e70d75d68429.json
deleted file mode 100644
index 635f40b..0000000
--- a/test/data/enm/study-NWKI-040aa132-1030-4a06-80a9-e70d75d68429.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-040aa132-1030-4a06-80a9-e70d75d68429",
- "owner": {
- "substance": {
- "uuid": "NWKI-9f37da26-8619-3eb1-9c29-e5f9ea09de54"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 500,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 98
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-040afb18-8fc4-4be2-8d1a-35f506470c0a.json b/test/data/enm/study-NWKI-040afb18-8fc4-4be2-8d1a-35f506470c0a.json
deleted file mode 100644
index 7b5a061..0000000
--- a/test/data/enm/study-NWKI-040afb18-8fc4-4be2-8d1a-35f506470c0a.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-040afb18-8fc4-4be2-8d1a-35f506470c0a",
- "owner": {
- "substance": {
- "uuid": "NWKI-19b5dfef-0d95-3878-9075-2897e8631277"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3390/ijerph110908867",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20,
- "errorValue": 4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-04792111-4a88-4b55-8c06-630900a232b4.json b/test/data/enm/study-NWKI-04792111-4a88-4b55-8c06-630900a232b4.json
deleted file mode 100644
index 15de0b5..0000000
--- a/test/data/enm/study-NWKI-04792111-4a88-4b55-8c06-630900a232b4.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-04792111-4a88-4b55-8c06-630900a232b4",
- "owner": {
- "substance": {
- "uuid": "NWKI-bb2f1a47-0260-3271-b9c3-edb850d15be9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1039/C4FD00117F",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "Å",
- "loQualifier": ">=",
- "loValue": 25,
- "upQualifier": "<=",
- "upValue": 30
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-04ce206c-a682-4005-8758-4afdb04152c1.json b/test/data/enm/study-NWKI-04ce206c-a682-4005-8758-4afdb04152c1.json
deleted file mode 100644
index d71a52a..0000000
--- a/test/data/enm/study-NWKI-04ce206c-a682-4005-8758-4afdb04152c1.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-04ce206c-a682-4005-8758-4afdb04152c1",
- "owner": {
- "substance": {
- "uuid": "NWKI-c0927a67-d21d-37e8-932d-fb1607e58aee"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 20,
- "upQualifier": "<=",
- "upValue": 80
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-04db465c-6485-4cf7-ba99-79ebf0b8ed0b.json b/test/data/enm/study-NWKI-04db465c-6485-4cf7-ba99-79ebf0b8ed0b.json
deleted file mode 100644
index d9575ce..0000000
--- a/test/data/enm/study-NWKI-04db465c-6485-4cf7-ba99-79ebf0b8ed0b.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-04db465c-6485-4cf7-ba99-79ebf0b8ed0b",
- "owner": {
- "substance": {
- "uuid": "NWKI-823e6217-d5b0-3c61-b886-768cfe726d38"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 65,
- "errorValue": 18
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-05229c6c-cb12-4dec-b919-4322f75c61a7.json b/test/data/enm/study-NWKI-05229c6c-cb12-4dec-b919-4322f75c61a7.json
deleted file mode 100644
index d6d6f6c..0000000
--- a/test/data/enm/study-NWKI-05229c6c-cb12-4dec-b919-4322f75c61a7.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-05229c6c-cb12-4dec-b919-4322f75c61a7",
- "owner": {
- "substance": {
- "uuid": "NWKI-c0927a67-d21d-37e8-932d-fb1607e58aee"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002167_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002167",
- "title": "BAO_0002167 Genotoxicity Assay"
- },
- "endpoint": "DNA in Tail",
- "guideline": [
- "Fpg-2Dmodified Comet Assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Fpg-2Dmodified Comet Assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "DNA_in_Tail",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- },
- "FPG Content": {
- "loValue": 0
- }
- },
- "result": {
- "unit": "%",
- "loValue": 3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0534ae85-3e71-44df-bb0f-3250d66e566a.json b/test/data/enm/study-NWKI-0534ae85-3e71-44df-bb0f-3250d66e566a.json
deleted file mode 100644
index a669521..0000000
--- a/test/data/enm/study-NWKI-0534ae85-3e71-44df-bb0f-3250d66e566a.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-0534ae85-3e71-44df-bb0f-3250d66e566a",
- "owner": {
- "substance": {
- "uuid": "NWKI-b19125a9-4499-3e0e-aa0c-7792401f4900"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DProtamine-2DRhodamine"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Protamine"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Protamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-05fe5e71-840f-4547-b1e5-0da0b4a50043.json b/test/data/enm/study-NWKI-05fe5e71-840f-4547-b1e5-0da0b4a50043.json
deleted file mode 100644
index c542e8f..0000000
--- a/test/data/enm/study-NWKI-05fe5e71-840f-4547-b1e5-0da0b4a50043.json
+++ /dev/null
@@ -1,54 +0,0 @@
-{
- "uuid": "NWKI-05fe5e71-840f-4547-b1e5-0da0b4a50043",
- "owner": {
- "substance": {
- "uuid": "NWKI-c93a144a-cd6d-3fe0-ab86-13adb168ccb1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_BOILING_SECTION",
- "term": "http://semanticscience.org/resource/CHEMINF_000257",
- "title": "4.3 Boiling point"
- },
- "endpoint": "Boiling Point",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Boiling point",
- "conditions": {
- "Atm. Pressure": null,
- "Decomposition": null
- },
- "result": {
- "unit": "Celsius",
- "loValue": 2230
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0603f68c-d040-45ee-a86f-e286e0b42fba.json b/test/data/enm/study-NWKI-0603f68c-d040-45ee-a86f-e286e0b42fba.json
deleted file mode 100644
index 522cdbf..0000000
--- a/test/data/enm/study-NWKI-0603f68c-d040-45ee-a86f-e286e0b42fba.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-0603f68c-d040-45ee-a86f-e286e0b42fba",
- "owner": {
- "substance": {
- "uuid": "NWKI-144a9226-4b93-36a9-ba2d-6b6c4903357b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null,
- "Serum": {
- "loValue": "cMEM"
- }
- },
- "result": {
- "unit": "nm",
- "loValue": 206
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0721f8d0-f670-4579-90c7-6ceea91fa757.json b/test/data/enm/study-NWKI-0721f8d0-f670-4579-90c7-6ceea91fa757.json
deleted file mode 100644
index 44f25eb..0000000
--- a/test/data/enm/study-NWKI-0721f8d0-f670-4579-90c7-6ceea91fa757.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-0721f8d0-f670-4579-90c7-6ceea91fa757",
- "owner": {
- "substance": {
- "uuid": "NWKI-52edeff5-900d-3f5a-86ba-550e9b368239"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 25,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-07bdb9ac-d6b8-49ed-9e70-c0a4e689b500.json b/test/data/enm/study-NWKI-07bdb9ac-d6b8-49ed-9e70-c0a4e689b500.json
deleted file mode 100644
index c6ecf72..0000000
--- a/test/data/enm/study-NWKI-07bdb9ac-d6b8-49ed-9e70-c0a4e689b500.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-07bdb9ac-d6b8-49ed-9e70-c0a4e689b500",
- "owner": {
- "substance": {
- "uuid": "NWKI-5eff14ab-be8b-3f57-96fc-7ed09e7546b5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/tx800289z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-07be4b7f-0887-463d-b691-f394d8ea38e9.json b/test/data/enm/study-NWKI-07be4b7f-0887-463d-b691-f394d8ea38e9.json
deleted file mode 100644
index 1a9ec74..0000000
--- a/test/data/enm/study-NWKI-07be4b7f-0887-463d-b691-f394d8ea38e9.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-07be4b7f-0887-463d-b691-f394d8ea38e9",
- "owner": {
- "substance": {
- "uuid": "NWKI-d42892b8-9b57-30a2-aa89-af61880c337a"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "SucroseCoating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Sucrose"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Sucrose"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-08af89f3-bfa5-4d48-b6f4-223f642ad984.json b/test/data/enm/study-NWKI-08af89f3-bfa5-4d48-b6f4-223f642ad984.json
deleted file mode 100644
index a3a4f3f..0000000
--- a/test/data/enm/study-NWKI-08af89f3-bfa5-4d48-b6f4-223f642ad984.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "NWKI-08af89f3-bfa5-4d48-b6f4-223f642ad984",
- "owner": {
- "substance": {
- "uuid": "NWKI-ee237892-6184-3016-92af-b41dc14e9f9b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DNH2"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "NH2"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "[H]N[H]"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "NH2"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-08d213c8-9de2-402c-ac0a-91c76b9a1541.json b/test/data/enm/study-NWKI-08d213c8-9de2-402c-ac0a-91c76b9a1541.json
deleted file mode 100644
index d3b6a63..0000000
--- a/test/data/enm/study-NWKI-08d213c8-9de2-402c-ac0a-91c76b9a1541.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-08d213c8-9de2-402c-ac0a-91c76b9a1541",
- "owner": {
- "substance": {
- "uuid": "NWKI-227a54df-573f-3515-8366-6bf1f17dd715"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 40.1,
- "errorValue": 12.6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-08e4b07b-144b-4d9c-9bf6-9d8228dd1846.json b/test/data/enm/study-NWKI-08e4b07b-144b-4d9c-9bf6-9d8228dd1846.json
deleted file mode 100644
index eacd969..0000000
--- a/test/data/enm/study-NWKI-08e4b07b-144b-4d9c-9bf6-9d8228dd1846.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-08e4b07b-144b-4d9c-9bf6-9d8228dd1846",
- "owner": {
- "substance": {
- "uuid": "NWKI-4beee533-65e4-364a-adb7-7a520180de61"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 34
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0b166019-f410-4706-9eea-e821785aede7.json b/test/data/enm/study-NWKI-0b166019-f410-4706-9eea-e821785aede7.json
deleted file mode 100644
index 455e9a4..0000000
--- a/test/data/enm/study-NWKI-0b166019-f410-4706-9eea-e821785aede7.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-0b166019-f410-4706-9eea-e821785aede7",
- "owner": {
- "substance": {
- "uuid": "NWKI-0fef8d9c-b0c4-3e41-88d0-b85cd538a796"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 15,
- "upQualifier": "<=",
- "upValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0b35977c-affa-4eb8-9861-35beca1a42ad.json b/test/data/enm/study-NWKI-0b35977c-affa-4eb8-9861-35beca1a42ad.json
deleted file mode 100644
index ef11bd4..0000000
--- a/test/data/enm/study-NWKI-0b35977c-affa-4eb8-9861-35beca1a42ad.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-0b35977c-affa-4eb8-9861-35beca1a42ad",
- "owner": {
- "substance": {
- "uuid": "NWKI-f90f7f33-091c-3d54-b313-213083c0e052"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1039/C4FD00117F",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "Å",
- "loQualifier": ">=",
- "loValue": 25,
- "upQualifier": "<=",
- "upValue": 30
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0b384935-1f9a-4fa2-8927-b1cdce466220.json b/test/data/enm/study-NWKI-0b384935-1f9a-4fa2-8927-b1cdce466220.json
deleted file mode 100644
index 6ca4884..0000000
--- a/test/data/enm/study-NWKI-0b384935-1f9a-4fa2-8927-b1cdce466220.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-0b384935-1f9a-4fa2-8927-b1cdce466220",
- "owner": {
- "substance": {
- "uuid": "NWKI-a33b26f0-2fc7-3aa1-9dd6-27380f725bfe"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.49
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0b3cce4b-154f-44ce-ae76-d549863886c4.json b/test/data/enm/study-NWKI-0b3cce4b-154f-44ce-ae76-d549863886c4.json
deleted file mode 100644
index 327d069..0000000
--- a/test/data/enm/study-NWKI-0b3cce4b-154f-44ce-ae76-d549863886c4.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-0b3cce4b-154f-44ce-ae76-d549863886c4",
- "owner": {
- "substance": {
- "uuid": "NWKI-3db8eb74-b206-31ad-8c1b-3569703c47cb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 600,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 4
- }
- },
- "result": {
- "unit": null,
- "loValue": 96
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0b7e9c74-ed51-4702-9ba9-8c6c800fa192.json b/test/data/enm/study-NWKI-0b7e9c74-ed51-4702-9ba9-8c6c800fa192.json
deleted file mode 100644
index 078e640..0000000
--- a/test/data/enm/study-NWKI-0b7e9c74-ed51-4702-9ba9-8c6c800fa192.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-0b7e9c74-ed51-4702-9ba9-8c6c800fa192",
- "owner": {
- "substance": {
- "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 60,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 24
- }
- },
- "result": {
- "unit": null,
- "loValue": 30
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0c083777-ee10-428d-b73a-d284574e691f.json b/test/data/enm/study-NWKI-0c083777-ee10-428d-b73a-d284574e691f.json
deleted file mode 100644
index 796f3b5..0000000
--- a/test/data/enm/study-NWKI-0c083777-ee10-428d-b73a-d284574e691f.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-0c083777-ee10-428d-b73a-d284574e691f",
- "owner": {
- "substance": {
- "uuid": "NWKI-c4c91023-5b41-3d6d-bb4f-ee1152926be0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 286,
- "errorValue": 2.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0c606592-8bc3-4922-b065-2df3dbfe66d7.json b/test/data/enm/study-NWKI-0c606592-8bc3-4922-b065-2df3dbfe66d7.json
deleted file mode 100644
index 6f771d1..0000000
--- a/test/data/enm/study-NWKI-0c606592-8bc3-4922-b065-2df3dbfe66d7.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-0c606592-8bc3-4922-b065-2df3dbfe66d7",
- "owner": {
- "substance": {
- "uuid": "NWKI-812e122b-8bee-350d-8aea-aaaa88ce84dd"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 1,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0cb40fcb-8551-4cd3-953b-ac7e29928e05.json b/test/data/enm/study-NWKI-0cb40fcb-8551-4cd3-953b-ac7e29928e05.json
deleted file mode 100644
index 1bf5330..0000000
--- a/test/data/enm/study-NWKI-0cb40fcb-8551-4cd3-953b-ac7e29928e05.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-0cb40fcb-8551-4cd3-953b-ac7e29928e05",
- "owner": {
- "substance": {
- "uuid": "NWKI-2944da02-ade8-38cc-b547-504f6afcf25a"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390.2011.587903",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 21
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0d65feb5-c903-4fdd-8c52-033527bcace7.json b/test/data/enm/study-NWKI-0d65feb5-c903-4fdd-8c52-033527bcace7.json
deleted file mode 100644
index a27240f..0000000
--- a/test/data/enm/study-NWKI-0d65feb5-c903-4fdd-8c52-033527bcace7.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-0d65feb5-c903-4fdd-8c52-033527bcace7",
- "owner": {
- "substance": {
- "uuid": "NWKI-2bd4c991-b6fb-3eb3-8a0c-794607388b79"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/tx800289z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 200
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0e21641a-22b9-4bc8-97f5-54d6ca3ee00a.json b/test/data/enm/study-NWKI-0e21641a-22b9-4bc8-97f5-54d6ca3ee00a.json
deleted file mode 100644
index b3aefb8..0000000
--- a/test/data/enm/study-NWKI-0e21641a-22b9-4bc8-97f5-54d6ca3ee00a.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-0e21641a-22b9-4bc8-97f5-54d6ca3ee00a",
- "owner": {
- "substance": {
- "uuid": "NWKI-c4c91023-5b41-3d6d-bb4f-ee1152926be0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": 52,
- "errorValue": 0.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0e6ea55b-a5f0-4e1b-a6ac-be5048dd4299.json b/test/data/enm/study-NWKI-0e6ea55b-a5f0-4e1b-a6ac-be5048dd4299.json
deleted file mode 100644
index 15fc8b8..0000000
--- a/test/data/enm/study-NWKI-0e6ea55b-a5f0-4e1b-a6ac-be5048dd4299.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-0e6ea55b-a5f0-4e1b-a6ac-be5048dd4299",
- "owner": {
- "substance": {
- "uuid": "NWKI-506de59a-ae92-361b-a934-0fdfa41101c0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0e875328-7a36-4c40-b123-ceba2d7322b1.json b/test/data/enm/study-NWKI-0e875328-7a36-4c40-b123-ceba2d7322b1.json
deleted file mode 100644
index fe8ebe4..0000000
--- a/test/data/enm/study-NWKI-0e875328-7a36-4c40-b123-ceba2d7322b1.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-0e875328-7a36-4c40-b123-ceba2d7322b1",
- "owner": {
- "substance": {
- "uuid": "NWKI-674cfd7c-bc77-36c7-bbe0-d52dd0233d64"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1080/10934520600966177",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 25
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0f073653-0c7b-422f-bb30-207c0d74f834.json b/test/data/enm/study-NWKI-0f073653-0c7b-422f-bb30-207c0d74f834.json
deleted file mode 100644
index 92c84e2..0000000
--- a/test/data/enm/study-NWKI-0f073653-0c7b-422f-bb30-207c0d74f834.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-0f073653-0c7b-422f-bb30-207c0d74f834",
- "owner": {
- "substance": {
- "uuid": "NWKI-6821e372-3b17-3a56-8fac-f66115f24e5d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0f441ae1-e2e7-47e6-9199-bcb0333142fb.json b/test/data/enm/study-NWKI-0f441ae1-e2e7-47e6-9199-bcb0333142fb.json
deleted file mode 100644
index bae656d..0000000
--- a/test/data/enm/study-NWKI-0f441ae1-e2e7-47e6-9199-bcb0333142fb.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-0f441ae1-e2e7-47e6-9199-bcb0333142fb",
- "owner": {
- "substance": {
- "uuid": "NWKI-5136670d-2925-31d0-8e12-811f8d67677f"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 137,
- "errorValue": 9.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0f714533-2dbe-4d3f-964b-6439e106f9a0.json b/test/data/enm/study-NWKI-0f714533-2dbe-4d3f-964b-6439e106f9a0.json
deleted file mode 100644
index f5fc603..0000000
--- a/test/data/enm/study-NWKI-0f714533-2dbe-4d3f-964b-6439e106f9a0.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "uuid": "NWKI-0f714533-2dbe-4d3f-964b-6439e106f9a0",
- "owner": {
- "substance": {
- "uuid": "NWKI-0d6f156a-6ce8-3bac-97e3-b5d62ded7f4e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Ag"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Ag"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "MEEECoating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "MEEE"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "SCCOCCOCCO"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "MEEE"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0fd9f570-8e2b-4ea0-b8d3-e710aa4a6dc6.json b/test/data/enm/study-NWKI-0fd9f570-8e2b-4ea0-b8d3-e710aa4a6dc6.json
deleted file mode 100644
index 91e89b9..0000000
--- a/test/data/enm/study-NWKI-0fd9f570-8e2b-4ea0-b8d3-e710aa4a6dc6.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-0fd9f570-8e2b-4ea0-b8d3-e710aa4a6dc6",
- "owner": {
- "substance": {
- "uuid": "NWKI-ff85c0ea-c908-35c8-9f1c-bfd037800a31"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -57
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-0fea1498-1740-4855-a77d-55ade5307ea5.json b/test/data/enm/study-NWKI-0fea1498-1740-4855-a77d-55ade5307ea5.json
deleted file mode 100644
index dc20c82..0000000
--- a/test/data/enm/study-NWKI-0fea1498-1740-4855-a77d-55ade5307ea5.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-0fea1498-1740-4855-a77d-55ade5307ea5",
- "owner": {
- "substance": {
- "uuid": "NWKI-2a046d54-ea47-31b2-a370-e886e5a0a6bb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -19.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-103813a2-d0f6-404e-a8e3-19328f87646c.json b/test/data/enm/study-NWKI-103813a2-d0f6-404e-a8e3-19328f87646c.json
deleted file mode 100644
index e30d031..0000000
--- a/test/data/enm/study-NWKI-103813a2-d0f6-404e-a8e3-19328f87646c.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-103813a2-d0f6-404e-a8e3-19328f87646c",
- "owner": {
- "substance": {
- "uuid": "NWKI-072b1631-f6f1-3f47-a4dc-723aa4eb0700"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn200546k",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 1.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-10979332-7b4a-427c-8f60-ddd044c02a91.json b/test/data/enm/study-NWKI-10979332-7b4a-427c-8f60-ddd044c02a91.json
deleted file mode 100644
index accdd96..0000000
--- a/test/data/enm/study-NWKI-10979332-7b4a-427c-8f60-ddd044c02a91.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-10979332-7b4a-427c-8f60-ddd044c02a91",
- "owner": {
- "substance": {
- "uuid": "NWKI-de03994b-9d74-3e39-aa41-e7df34384442"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 19
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-10fafc91-a412-4a1e-8434-40f70326e50e.json b/test/data/enm/study-NWKI-10fafc91-a412-4a1e-8434-40f70326e50e.json
deleted file mode 100644
index c7df5cb..0000000
--- a/test/data/enm/study-NWKI-10fafc91-a412-4a1e-8434-40f70326e50e.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-10fafc91-a412-4a1e-8434-40f70326e50e",
- "owner": {
- "substance": {
- "uuid": "NWKI-4358aa69-dec1-387a-b7ea-2238198ccdff"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null,
- "Serum": {
- "loValue": "PBS"
- }
- },
- "result": {
- "unit": "nm",
- "loValue": 120
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-11640aa5-704e-4c6e-b85d-2006d4cfe282.json b/test/data/enm/study-NWKI-11640aa5-704e-4c6e-b85d-2006d4cfe282.json
deleted file mode 100644
index cf97154..0000000
--- a/test/data/enm/study-NWKI-11640aa5-704e-4c6e-b85d-2006d4cfe282.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-11640aa5-704e-4c6e-b85d-2006d4cfe282",
- "owner": {
- "substance": {
- "uuid": "NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 10
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-11826ae4-fd66-4f96-b3ee-05b4d9a35b2b.json b/test/data/enm/study-NWKI-11826ae4-fd66-4f96-b3ee-05b4d9a35b2b.json
deleted file mode 100644
index e6ee8a3..0000000
--- a/test/data/enm/study-NWKI-11826ae4-fd66-4f96-b3ee-05b4d9a35b2b.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-11826ae4-fd66-4f96-b3ee-05b4d9a35b2b",
- "owner": {
- "substance": {
- "uuid": "NWKI-8a968835-50ab-33df-bf5e-42de32d01c15"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Colon HT29",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 6,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 4
- }
- },
- "result": {
- "unit": null,
- "loValue": 98
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-11c639bc-a4f6-48dd-b84f-c115cd68383f.json b/test/data/enm/study-NWKI-11c639bc-a4f6-48dd-b84f-c115cd68383f.json
deleted file mode 100644
index 7cdec34..0000000
--- a/test/data/enm/study-NWKI-11c639bc-a4f6-48dd-b84f-c115cd68383f.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-11c639bc-a4f6-48dd-b84f-c115cd68383f",
- "owner": {
- "substance": {
- "uuid": "NWKI-ae0be5b8-266b-3b6a-825d-55f14b51cc99"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe2O3"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe2O3"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DArg7COOH"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "L-2DArginine-2D7-2DCOOH"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "L-2DArginine-2D7-2DCOOH"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-11ce2c1b-a219-4fc7-841d-add4602b708b.json b/test/data/enm/study-NWKI-11ce2c1b-a219-4fc7-841d-add4602b708b.json
deleted file mode 100644
index 707b3b4..0000000
--- a/test/data/enm/study-NWKI-11ce2c1b-a219-4fc7-841d-add4602b708b.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "NWKI-11ce2c1b-a219-4fc7-841d-add4602b708b",
- "owner": {
- "substance": {
- "uuid": "NWKI-3c8c8bb2-416f-3bff-862a-8433538cd4c5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": -20,
- "upQualifier": "<=",
- "upValue": 35
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1256873c-3d55-42c7-a833-912946549b1b.json b/test/data/enm/study-NWKI-1256873c-3d55-42c7-a833-912946549b1b.json
deleted file mode 100644
index c610d30..0000000
--- a/test/data/enm/study-NWKI-1256873c-3d55-42c7-a833-912946549b1b.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-1256873c-3d55-42c7-a833-912946549b1b",
- "owner": {
- "substance": {
- "uuid": "NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 1.6,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-12ba0164-b75b-4dfc-9571-cade11e8b178.json b/test/data/enm/study-NWKI-12ba0164-b75b-4dfc-9571-cade11e8b178.json
deleted file mode 100644
index a83a210..0000000
--- a/test/data/enm/study-NWKI-12ba0164-b75b-4dfc-9571-cade11e8b178.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-12ba0164-b75b-4dfc-9571-cade11e8b178",
- "owner": {
- "substance": {
- "uuid": "NWKI-c0927a67-d21d-37e8-932d-fb1607e58aee"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "BET",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 50
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-12dd4a77-2368-4a9c-b7a3-2f786aaf3bab.json b/test/data/enm/study-NWKI-12dd4a77-2368-4a9c-b7a3-2f786aaf3bab.json
deleted file mode 100644
index d6baaa3..0000000
--- a/test/data/enm/study-NWKI-12dd4a77-2368-4a9c-b7a3-2f786aaf3bab.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-12dd4a77-2368-4a9c-b7a3-2f786aaf3bab",
- "owner": {
- "substance": {
- "uuid": "NWKI-69b604fb-e892-31ba-a6f5-feb6cb04effb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DAF750"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-12f2840e-a312-4d32-8e61-e204b0c782fc.json b/test/data/enm/study-NWKI-12f2840e-a312-4d32-8e61-e204b0c782fc.json
deleted file mode 100644
index 2ffcd46..0000000
--- a/test/data/enm/study-NWKI-12f2840e-a312-4d32-8e61-e204b0c782fc.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-12f2840e-a312-4d32-8e61-e204b0c782fc",
- "owner": {
- "substance": {
- "uuid": "NWKI-e6ef5597-a3f9-3f21-afff-db5f654ef534"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.29
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-133b31f5-75fb-4baa-9d21-20bbe6524d9d.json b/test/data/enm/study-NWKI-133b31f5-75fb-4baa-9d21-20bbe6524d9d.json
deleted file mode 100644
index 74270ed..0000000
--- a/test/data/enm/study-NWKI-133b31f5-75fb-4baa-9d21-20bbe6524d9d.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-133b31f5-75fb-4baa-9d21-20bbe6524d9d",
- "owner": {
- "substance": {
- "uuid": "NWKI-9f37da26-8619-3eb1-9c29-e5f9ea09de54"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 1000,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 92
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1349c808-40d3-4a58-aeed-e86dd738690e.json b/test/data/enm/study-NWKI-1349c808-40d3-4a58-aeed-e86dd738690e.json
deleted file mode 100644
index 0e9e013..0000000
--- a/test/data/enm/study-NWKI-1349c808-40d3-4a58-aeed-e86dd738690e.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-1349c808-40d3-4a58-aeed-e86dd738690e",
- "owner": {
- "substance": {
- "uuid": "NWKI-3ccb7313-0905-322a-ac62-09adb667bc0f"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Average Length",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Average Length",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "μm",
- "loQualifier": ">=",
- "loValue": 5,
- "upQualifier": "<=",
- "upValue": 15
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1384c6b9-9050-4f24-8a83-94f1ce913a4e.json b/test/data/enm/study-NWKI-1384c6b9-9050-4f24-8a83-94f1ce913a4e.json
deleted file mode 100644
index 3e95888..0000000
--- a/test/data/enm/study-NWKI-1384c6b9-9050-4f24-8a83-94f1ce913a4e.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-1384c6b9-9050-4f24-8a83-94f1ce913a4e",
- "owner": {
- "substance": {
- "uuid": "NWKI-ff480524-2eb0-39e2-a449-47c026f09eb9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 18.4,
- "errorValue": 0.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-13e65857-d4ca-4c7a-803a-342b8fa4183b.json b/test/data/enm/study-NWKI-13e65857-d4ca-4c7a-803a-342b8fa4183b.json
deleted file mode 100644
index 5c27e1d..0000000
--- a/test/data/enm/study-NWKI-13e65857-d4ca-4c7a-803a-342b8fa4183b.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-13e65857-d4ca-4c7a-803a-342b8fa4183b",
- "owner": {
- "substance": {
- "uuid": "NWKI-9a0a7a86-fd00-3835-9795-a4da7d9d1544"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -11.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-13fbf7ad-6fc4-4b94-9a9d-3e66c612fa4c.json b/test/data/enm/study-NWKI-13fbf7ad-6fc4-4b94-9a9d-3e66c612fa4c.json
deleted file mode 100644
index a30f478..0000000
--- a/test/data/enm/study-NWKI-13fbf7ad-6fc4-4b94-9a9d-3e66c612fa4c.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "NWKI-13fbf7ad-6fc4-4b94-9a9d-3e66c612fa4c",
- "owner": {
- "substance": {
- "uuid": "NWKI-ede0d5b5-191a-3003-ac70-a97397ea7bb2"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn301622h",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 7
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -45,
- "errorValue": 4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-14265abe-890f-4648-83e6-9f148a05107f.json b/test/data/enm/study-NWKI-14265abe-890f-4648-83e6-9f148a05107f.json
deleted file mode 100644
index 2963c9b..0000000
--- a/test/data/enm/study-NWKI-14265abe-890f-4648-83e6-9f148a05107f.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-14265abe-890f-4648-83e6-9f148a05107f",
- "owner": {
- "substance": {
- "uuid": "NWKI-2af8ed34-029d-3644-8327-23a596cfae0d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 200
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1540f00c-e7aa-4d25-ab3b-a6a05a7060cf.json b/test/data/enm/study-NWKI-1540f00c-e7aa-4d25-ab3b-a6a05a7060cf.json
deleted file mode 100644
index e22defc..0000000
--- a/test/data/enm/study-NWKI-1540f00c-e7aa-4d25-ab3b-a6a05a7060cf.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-1540f00c-e7aa-4d25-ab3b-a6a05a7060cf",
- "owner": {
- "substance": {
- "uuid": "NWKI-e518c122-5f4f-3611-8b30-56b671883e5c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe2O3"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe2O3"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DED-2DAminoSPARK680"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Amino_SPARK680"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Amino_SPARK680"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-157c1f0e-0344-4310-9fca-ac778f7c3501.json b/test/data/enm/study-NWKI-157c1f0e-0344-4310-9fca-ac778f7c3501.json
deleted file mode 100644
index b8de733..0000000
--- a/test/data/enm/study-NWKI-157c1f0e-0344-4310-9fca-ac778f7c3501.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-157c1f0e-0344-4310-9fca-ac778f7c3501",
- "owner": {
- "substance": {
- "uuid": "NWKI-2390517f-b763-3850-b1b4-6e50fee63829"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.81
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1599e8df-9aca-495a-b200-3a79e17f4725.json b/test/data/enm/study-NWKI-1599e8df-9aca-495a-b200-3a79e17f4725.json
deleted file mode 100644
index ccbed52..0000000
--- a/test/data/enm/study-NWKI-1599e8df-9aca-495a-b200-3a79e17f4725.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-1599e8df-9aca-495a-b200-3a79e17f4725",
- "owner": {
- "substance": {
- "uuid": "NWKI-6b8a44a2-b835-3f75-903c-cf0a71a247c9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es051043o",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002993_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002993",
- "title": "BAO_0002993 Cytotoxicity Assay"
- },
- "endpoint": "Concentration in cell",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Concentration_in_cell",
- "conditions": {
- "Concentration in culture medium": {
- "loValue": 100,
- "unit": "ng/g"
- },
- "Time": {
- "loValue": 3,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 18
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1616676d-cef0-48d9-84b5-0a5fe92b2705.json b/test/data/enm/study-NWKI-1616676d-cef0-48d9-84b5-0a5fe92b2705.json
deleted file mode 100644
index adee85b..0000000
--- a/test/data/enm/study-NWKI-1616676d-cef0-48d9-84b5-0a5fe92b2705.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-1616676d-cef0-48d9-84b5-0a5fe92b2705",
- "owner": {
- "substance": {
- "uuid": "NWKI-77fb742b-c676-3ad7-bd19-6d5ec1df62ad"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DED-2DVT680"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PVA"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1663bbb9-45a2-4a1f-b694-e960165592ff.json b/test/data/enm/study-NWKI-1663bbb9-45a2-4a1f-b694-e960165592ff.json
deleted file mode 100644
index 0781494..0000000
--- a/test/data/enm/study-NWKI-1663bbb9-45a2-4a1f-b694-e960165592ff.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "NWKI-1663bbb9-45a2-4a1f-b694-e960165592ff",
- "owner": {
- "substance": {
- "uuid": "NWKI-7d4e9d59-fb38-37b9-99ec-b150ed7ce133"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn301622h",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 7
- }
- },
- "result": {
- "unit": "mV",
- "loValue": 10,
- "errorValue": 2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1680e54d-dc50-46e5-beb2-725261d70e42.json b/test/data/enm/study-NWKI-1680e54d-dc50-46e5-beb2-725261d70e42.json
deleted file mode 100644
index fefa694..0000000
--- a/test/data/enm/study-NWKI-1680e54d-dc50-46e5-beb2-725261d70e42.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-1680e54d-dc50-46e5-beb2-725261d70e42",
- "owner": {
- "substance": {
- "uuid": "NWKI-92e20781-9c38-3c12-a311-14eab1e776fa"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -61.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-16943eea-e6e8-4f59-b660-6bf1f4876dbf.json b/test/data/enm/study-NWKI-16943eea-e6e8-4f59-b660-6bf1f4876dbf.json
deleted file mode 100644
index 636d0a7..0000000
--- a/test/data/enm/study-NWKI-16943eea-e6e8-4f59-b660-6bf1f4876dbf.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-16943eea-e6e8-4f59-b660-6bf1f4876dbf",
- "owner": {
- "substance": {
- "uuid": "NWKI-cad5bf58-cc90-33e5-88bb-bad4c9f9fe9e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 28
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-16a4b79d-ba53-4885-a2b8-f4204bf105d5.json b/test/data/enm/study-NWKI-16a4b79d-ba53-4885-a2b8-f4204bf105d5.json
deleted file mode 100644
index 3b89e72..0000000
--- a/test/data/enm/study-NWKI-16a4b79d-ba53-4885-a2b8-f4204bf105d5.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-16a4b79d-ba53-4885-a2b8-f4204bf105d5",
- "owner": {
- "substance": {
- "uuid": "NWKI-3ccb7313-0905-322a-ac62-09adb667bc0f"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Diameter",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Diameter",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 10,
- "upQualifier": "<=",
- "upValue": 30
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-16d02082-1ba3-4510-b59e-403abf8f1d23.json b/test/data/enm/study-NWKI-16d02082-1ba3-4510-b59e-403abf8f1d23.json
deleted file mode 100644
index 69ccfdc..0000000
--- a/test/data/enm/study-NWKI-16d02082-1ba3-4510-b59e-403abf8f1d23.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-16d02082-1ba3-4510-b59e-403abf8f1d23",
- "owner": {
- "substance": {
- "uuid": "NWKI-95bb8173-3aad-3441-a50e-97e62401eadb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1039/C4FD00117F",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "Å",
- "loQualifier": ">=",
- "loValue": 25,
- "upQualifier": "<=",
- "upValue": 30
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-17092417-17a0-4373-84f2-da1d50f4d32c.json b/test/data/enm/study-NWKI-17092417-17a0-4373-84f2-da1d50f4d32c.json
deleted file mode 100644
index ed2768c..0000000
--- a/test/data/enm/study-NWKI-17092417-17a0-4373-84f2-da1d50f4d32c.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-17092417-17a0-4373-84f2-da1d50f4d32c",
- "owner": {
- "substance": {
- "uuid": "NWKI-11ae9232-1521-31d6-9466-c902c43d94fe"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DTatPeptide"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-173dce50-8e10-4eb6-8606-86a64f77aa63.json b/test/data/enm/study-NWKI-173dce50-8e10-4eb6-8606-86a64f77aa63.json
deleted file mode 100644
index 582f878..0000000
--- a/test/data/enm/study-NWKI-173dce50-8e10-4eb6-8606-86a64f77aa63.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-173dce50-8e10-4eb6-8606-86a64f77aa63",
- "owner": {
- "substance": {
- "uuid": "NWKI-86b21444-5403-3e29-b117-e09ef92cca2a"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Isoelectric Point",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ISOELECTRIC POINT",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": 5.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-17738fdb-85b1-4bee-91c6-ce6784ade433.json b/test/data/enm/study-NWKI-17738fdb-85b1-4bee-91c6-ce6784ade433.json
deleted file mode 100644
index 4efa66f..0000000
--- a/test/data/enm/study-NWKI-17738fdb-85b1-4bee-91c6-ce6784ade433.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-17738fdb-85b1-4bee-91c6-ce6784ade433",
- "owner": {
- "substance": {
- "uuid": "NWKI-9f37da26-8619-3eb1-9c29-e5f9ea09de54"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 10,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 101
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-17b02ae9-1dd2-4a6a-8162-4ed9e0e25770.json b/test/data/enm/study-NWKI-17b02ae9-1dd2-4a6a-8162-4ed9e0e25770.json
deleted file mode 100644
index be5ca0c..0000000
--- a/test/data/enm/study-NWKI-17b02ae9-1dd2-4a6a-8162-4ed9e0e25770.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-17b02ae9-1dd2-4a6a-8162-4ed9e0e25770",
- "owner": {
- "substance": {
- "uuid": "NWKI-0a6e319e-71fc-37f7-b88d-fbda2e07ccc1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 283,
- "errorValue": 7.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-180c42f0-dd92-422b-a704-2cede4ecd197.json b/test/data/enm/study-NWKI-180c42f0-dd92-422b-a704-2cede4ecd197.json
deleted file mode 100644
index 4685cf8..0000000
--- a/test/data/enm/study-NWKI-180c42f0-dd92-422b-a704-2cede4ecd197.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "NWKI-180c42f0-dd92-422b-a704-2cede4ecd197",
- "owner": {
- "substance": {
- "uuid": "NWKI-3424add5-867e-3dc5-864d-36c47589024b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn301622h",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 7
- }
- },
- "result": {
- "unit": "mV",
- "loValue": 10,
- "errorValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-18542d3a-af3b-409e-867a-37ce489931fe.json b/test/data/enm/study-NWKI-18542d3a-af3b-409e-867a-37ce489931fe.json
deleted file mode 100644
index 1f29e7e..0000000
--- a/test/data/enm/study-NWKI-18542d3a-af3b-409e-867a-37ce489931fe.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-18542d3a-af3b-409e-867a-37ce489931fe",
- "owner": {
- "substance": {
- "uuid": "NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 100,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-18971884-ccca-4501-afc3-483cbc30d80e.json b/test/data/enm/study-NWKI-18971884-ccca-4501-afc3-483cbc30d80e.json
deleted file mode 100644
index f3b8575..0000000
--- a/test/data/enm/study-NWKI-18971884-ccca-4501-afc3-483cbc30d80e.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-18971884-ccca-4501-afc3-483cbc30d80e",
- "owner": {
- "substance": {
- "uuid": "NWKI-6d5462cc-7e11-3919-b769-135f56fd2536"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.soilbio.2013.01.016",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 50,
- "upQualifier": "<=",
- "upValue": 105
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-18eacf9a-c155-4ed7-8c75-10cac75f1858.json b/test/data/enm/study-NWKI-18eacf9a-c155-4ed7-8c75-10cac75f1858.json
deleted file mode 100644
index a37bb9c..0000000
--- a/test/data/enm/study-NWKI-18eacf9a-c155-4ed7-8c75-10cac75f1858.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-18eacf9a-c155-4ed7-8c75-10cac75f1858",
- "owner": {
- "substance": {
- "uuid": "NWKI-ad1d5068-29cd-3d8c-9ed0-44ed4ce06ddd"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -21.9
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-18ecc7e2-69c6-456f-a6f9-35acc32c95d4.json b/test/data/enm/study-NWKI-18ecc7e2-69c6-456f-a6f9-35acc32c95d4.json
deleted file mode 100644
index 8d79077..0000000
--- a/test/data/enm/study-NWKI-18ecc7e2-69c6-456f-a6f9-35acc32c95d4.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-18ecc7e2-69c6-456f-a6f9-35acc32c95d4",
- "owner": {
- "substance": {
- "uuid": "NWKI-ef8660fd-e624-3a94-91bc-ad5a6e47bcf3"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -14.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-18f29d40-3b2e-4bd9-8fe1-049810cbbbb4.json b/test/data/enm/study-NWKI-18f29d40-3b2e-4bd9-8fe1-049810cbbbb4.json
deleted file mode 100644
index 3852aad..0000000
--- a/test/data/enm/study-NWKI-18f29d40-3b2e-4bd9-8fe1-049810cbbbb4.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-18f29d40-3b2e-4bd9-8fe1-049810cbbbb4",
- "owner": {
- "substance": {
- "uuid": "NWKI-3bbccc84-019f-369f-ba70-490fcfde4423"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.01
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1a0ef2d1-139d-4c40-8b48-602061cc52b5.json b/test/data/enm/study-NWKI-1a0ef2d1-139d-4c40-8b48-602061cc52b5.json
deleted file mode 100644
index f4e4477..0000000
--- a/test/data/enm/study-NWKI-1a0ef2d1-139d-4c40-8b48-602061cc52b5.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-1a0ef2d1-139d-4c40-8b48-602061cc52b5",
- "owner": {
- "substance": {
- "uuid": "NWKI-80f9ab46-f8fe-36de-9335-17c9d1dbdba5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390.2015.1017022",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Average Length",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Average Length",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "μm",
- "loValue": 21,
- "errorValue": 18
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1aa514a8-41a9-4f83-b809-b27d84e9533f.json b/test/data/enm/study-NWKI-1aa514a8-41a9-4f83-b809-b27d84e9533f.json
deleted file mode 100644
index c3680d9..0000000
--- a/test/data/enm/study-NWKI-1aa514a8-41a9-4f83-b809-b27d84e9533f.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-1aa514a8-41a9-4f83-b809-b27d84e9533f",
- "owner": {
- "substance": {
- "uuid": "NWKI-ab2d4bdd-7a72-3e26-8552-5bb6027896bb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn202116p",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 12,
- "errorValue": 7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1b01ed49-5212-4774-b777-9ff22f324e2f.json b/test/data/enm/study-NWKI-1b01ed49-5212-4774-b777-9ff22f324e2f.json
deleted file mode 100644
index 35501c2..0000000
--- a/test/data/enm/study-NWKI-1b01ed49-5212-4774-b777-9ff22f324e2f.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-1b01ed49-5212-4774-b777-9ff22f324e2f",
- "owner": {
- "substance": {
- "uuid": "NWKI-c075299c-c306-341a-8ccb-62c5bd123ab3"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 140.6,
- "errorValue": 52.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1b674a0a-fa78-48e5-b76c-147e56f8d237.json b/test/data/enm/study-NWKI-1b674a0a-fa78-48e5-b76c-147e56f8d237.json
deleted file mode 100644
index 47dd05b..0000000
--- a/test/data/enm/study-NWKI-1b674a0a-fa78-48e5-b76c-147e56f8d237.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-1b674a0a-fa78-48e5-b76c-147e56f8d237",
- "owner": {
- "substance": {
- "uuid": "NWKI-fe8fe744-ea1f-3841-9a6d-f81be44651a8"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn200546k",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 10
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1c0923d6-4d39-4523-b2a4-409698803b71.json b/test/data/enm/study-NWKI-1c0923d6-4d39-4523-b2a4-409698803b71.json
deleted file mode 100644
index dfdd46a..0000000
--- a/test/data/enm/study-NWKI-1c0923d6-4d39-4523-b2a4-409698803b71.json
+++ /dev/null
@@ -1,65 +0,0 @@
-{
- "uuid": "NWKI-1c0923d6-4d39-4523-b2a4-409698803b71",
- "owner": {
- "substance": {
- "uuid": "NWKI-144a9226-4b93-36a9-ba2d-6b6c4903357b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "Serum": {
- "loValue": "cMEM"
- },
- "pH": {
- "loValue": 7.88
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -11
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1c1ebeed-25e4-4fa7-aee3-053f238fd1da.json b/test/data/enm/study-NWKI-1c1ebeed-25e4-4fa7-aee3-053f238fd1da.json
deleted file mode 100644
index 6e4ed95..0000000
--- a/test/data/enm/study-NWKI-1c1ebeed-25e4-4fa7-aee3-053f238fd1da.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-1c1ebeed-25e4-4fa7-aee3-053f238fd1da",
- "owner": {
- "substance": {
- "uuid": "NWKI-ee237892-6184-3016-92af-b41dc14e9f9b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": 5.9
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1cca474e-5f3a-4a1c-adac-5e40e6554f00.json b/test/data/enm/study-NWKI-1cca474e-5f3a-4a1c-adac-5e40e6554f00.json
deleted file mode 100644
index d4d93df..0000000
--- a/test/data/enm/study-NWKI-1cca474e-5f3a-4a1c-adac-5e40e6554f00.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-1cca474e-5f3a-4a1c-adac-5e40e6554f00",
- "owner": {
- "substance": {
- "uuid": "NWKI-b14e37d1-8dbb-36d7-925c-4093c91a0e92"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 5,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1d0171f7-e65c-4da4-9b47-5218fb7f50ed.json b/test/data/enm/study-NWKI-1d0171f7-e65c-4da4-9b47-5218fb7f50ed.json
deleted file mode 100644
index c6e6fee..0000000
--- a/test/data/enm/study-NWKI-1d0171f7-e65c-4da4-9b47-5218fb7f50ed.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-1d0171f7-e65c-4da4-9b47-5218fb7f50ed",
- "owner": {
- "substance": {
- "uuid": "NWKI-9142c528-4a84-3566-b678-dc1eef7d22fe"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "Shape",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Rutile"
- },
- "effects": [
- {
- "endpoint": "SHAPE",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": null,
- "textValue": "Rutile"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1dbe71a3-fc3c-4dde-9e19-213824a4650e.json b/test/data/enm/study-NWKI-1dbe71a3-fc3c-4dde-9e19-213824a4650e.json
deleted file mode 100644
index a12caab..0000000
--- a/test/data/enm/study-NWKI-1dbe71a3-fc3c-4dde-9e19-213824a4650e.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-1dbe71a3-fc3c-4dde-9e19-213824a4650e",
- "owner": {
- "substance": {
- "uuid": "NWKI-34a6262c-7f25-3eea-9dd0-bf1e1df40ca9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "SiO2"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "SiO2"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "APS_Coating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "APS"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "APS"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1ddab2f0-52a5-4c0a-835c-8644a8da7e30.json b/test/data/enm/study-NWKI-1ddab2f0-52a5-4c0a-835c-8644a8da7e30.json
deleted file mode 100644
index a52c507..0000000
--- a/test/data/enm/study-NWKI-1ddab2f0-52a5-4c0a-835c-8644a8da7e30.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-1ddab2f0-52a5-4c0a-835c-8644a8da7e30",
- "owner": {
- "substance": {
- "uuid": "NWKI-417f0133-8f2c-3255-bdcf-7d71ac295d00"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 25,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1df33a17-0117-4758-bb27-99b89f32effb.json b/test/data/enm/study-NWKI-1df33a17-0117-4758-bb27-99b89f32effb.json
deleted file mode 100644
index afaa012..0000000
--- a/test/data/enm/study-NWKI-1df33a17-0117-4758-bb27-99b89f32effb.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-1df33a17-0117-4758-bb27-99b89f32effb",
- "owner": {
- "substance": {
- "uuid": "NWKI-de03994b-9d74-3e39-aa41-e7df34384442"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 25,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1e3822cd-c251-4274-9ef5-193cb52cbf11.json b/test/data/enm/study-NWKI-1e3822cd-c251-4274-9ef5-193cb52cbf11.json
deleted file mode 100644
index 080476f..0000000
--- a/test/data/enm/study-NWKI-1e3822cd-c251-4274-9ef5-193cb52cbf11.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-1e3822cd-c251-4274-9ef5-193cb52cbf11",
- "owner": {
- "substance": {
- "uuid": "NWKI-37e2b8ec-0e57-3ed8-9afc-93a3030ee25f"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 9.48,
- "errorValue": 1.26
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1e3b4322-d062-4d9f-805c-55c6cbb1b3a5.json b/test/data/enm/study-NWKI-1e3b4322-d062-4d9f-805c-55c6cbb1b3a5.json
deleted file mode 100644
index d576579..0000000
--- a/test/data/enm/study-NWKI-1e3b4322-d062-4d9f-805c-55c6cbb1b3a5.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-1e3b4322-d062-4d9f-805c-55c6cbb1b3a5",
- "owner": {
- "substance": {
- "uuid": "NWKI-1d7c10cd-c2fe-3e95-94ec-2e4ee7099ec5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 21
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1e4e0b84-a846-4a46-b5ac-51b228cfed1c.json b/test/data/enm/study-NWKI-1e4e0b84-a846-4a46-b5ac-51b228cfed1c.json
deleted file mode 100644
index f44534a..0000000
--- a/test/data/enm/study-NWKI-1e4e0b84-a846-4a46-b5ac-51b228cfed1c.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-1e4e0b84-a846-4a46-b5ac-51b228cfed1c",
- "owner": {
- "substance": {
- "uuid": "NWKI-85b50517-fdea-3aa6-abbd-dd506393aaa5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 8,
- "upQualifier": "<=",
- "upValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1e7f5ba6-8146-40ef-a3f1-7d33628926a0.json b/test/data/enm/study-NWKI-1e7f5ba6-8146-40ef-a3f1-7d33628926a0.json
deleted file mode 100644
index 3a60c27..0000000
--- a/test/data/enm/study-NWKI-1e7f5ba6-8146-40ef-a3f1-7d33628926a0.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-1e7f5ba6-8146-40ef-a3f1-7d33628926a0",
- "owner": {
- "substance": {
- "uuid": "NWKI-202b322d-51c9-3d73-a049-1e4019f8ddad"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 4.98,
- "errorValue": 0.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1eeb4b23-e2b0-4653-bc3a-0e9a5a4fba3b.json b/test/data/enm/study-NWKI-1eeb4b23-e2b0-4653-bc3a-0e9a5a4fba3b.json
deleted file mode 100644
index b206bd2..0000000
--- a/test/data/enm/study-NWKI-1eeb4b23-e2b0-4653-bc3a-0e9a5a4fba3b.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-1eeb4b23-e2b0-4653-bc3a-0e9a5a4fba3b",
- "owner": {
- "substance": {
- "uuid": "NWKI-9142c528-4a84-3566-b678-dc1eef7d22fe"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1eef5dd4-73da-41fc-a306-1c736fcb69bb.json b/test/data/enm/study-NWKI-1eef5dd4-73da-41fc-a306-1c736fcb69bb.json
deleted file mode 100644
index ae4e746..0000000
--- a/test/data/enm/study-NWKI-1eef5dd4-73da-41fc-a306-1c736fcb69bb.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-1eef5dd4-73da-41fc-a306-1c736fcb69bb",
- "owner": {
- "substance": {
- "uuid": "NWKI-e624f68e-2e00-30e4-b4bb-9e34383580cb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 58
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1f25b708-f769-4dcf-8e2f-85bfac650cdd.json b/test/data/enm/study-NWKI-1f25b708-f769-4dcf-8e2f-85bfac650cdd.json
deleted file mode 100644
index b1a68df..0000000
--- a/test/data/enm/study-NWKI-1f25b708-f769-4dcf-8e2f-85bfac650cdd.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-1f25b708-f769-4dcf-8e2f-85bfac650cdd",
- "owner": {
- "substance": {
- "uuid": "NWKI-ee237892-6184-3016-92af-b41dc14e9f9b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 74
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-1f71d69f-b2dd-4f8a-a4f7-0c2c2085058b.json b/test/data/enm/study-NWKI-1f71d69f-b2dd-4f8a-a4f7-0c2c2085058b.json
deleted file mode 100644
index 46046c9..0000000
--- a/test/data/enm/study-NWKI-1f71d69f-b2dd-4f8a-a4f7-0c2c2085058b.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-1f71d69f-b2dd-4f8a-a4f7-0c2c2085058b",
- "owner": {
- "substance": {
- "uuid": "NWKI-de03994b-9d74-3e39-aa41-e7df34384442"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 1,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-202033a2-bd5b-4059-9c82-d95501402b12.json b/test/data/enm/study-NWKI-202033a2-bd5b-4059-9c82-d95501402b12.json
deleted file mode 100644
index e2edf7c..0000000
--- a/test/data/enm/study-NWKI-202033a2-bd5b-4059-9c82-d95501402b12.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-202033a2-bd5b-4059-9c82-d95501402b12",
- "owner": {
- "substance": {
- "uuid": "NWKI-bbce341e-3e4d-37f9-a891-5462ada32180"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -50
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-203bc896-c8b2-4425-ba37-6c4ab168f360.json b/test/data/enm/study-NWKI-203bc896-c8b2-4425-ba37-6c4ab168f360.json
deleted file mode 100644
index 38e81be..0000000
--- a/test/data/enm/study-NWKI-203bc896-c8b2-4425-ba37-6c4ab168f360.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-203bc896-c8b2-4425-ba37-6c4ab168f360",
- "owner": {
- "substance": {
- "uuid": "NWKI-e85f1dfb-0830-32a3-8394-c2cce810e3e2"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -57.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-204f8f8a-215e-4589-abe7-4fe42b8e2dc2.json b/test/data/enm/study-NWKI-204f8f8a-215e-4589-abe7-4fe42b8e2dc2.json
deleted file mode 100644
index 7b7e54d..0000000
--- a/test/data/enm/study-NWKI-204f8f8a-215e-4589-abe7-4fe42b8e2dc2.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "NWKI-204f8f8a-215e-4589-abe7-4fe42b8e2dc2",
- "owner": {
- "substance": {
- "uuid": "NWKI-e078849d-6137-33fc-b103-d458cb77184a"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn301622h",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 7
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -22,
- "errorValue": 3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-20706a1c-e61e-45e8-89f4-5253276b5155.json b/test/data/enm/study-NWKI-20706a1c-e61e-45e8-89f4-5253276b5155.json
deleted file mode 100644
index e3aa144..0000000
--- a/test/data/enm/study-NWKI-20706a1c-e61e-45e8-89f4-5253276b5155.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-20706a1c-e61e-45e8-89f4-5253276b5155",
- "owner": {
- "substance": {
- "uuid": "NWKI-ede00e9f-201f-33c9-9191-8dbf67fcf1b1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -16.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2099233e-b04b-4f9e-89f7-e25339b6cc90.json b/test/data/enm/study-NWKI-2099233e-b04b-4f9e-89f7-e25339b6cc90.json
deleted file mode 100644
index 3f9a84b..0000000
--- a/test/data/enm/study-NWKI-2099233e-b04b-4f9e-89f7-e25339b6cc90.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-2099233e-b04b-4f9e-89f7-e25339b6cc90",
- "owner": {
- "substance": {
- "uuid": "NWKI-82c12809-d7af-3061-a531-1db744c521f0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DFITC"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "FITC"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "FITC"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-210d0bde-ac61-4498-92e9-e801eaed0325.json b/test/data/enm/study-NWKI-210d0bde-ac61-4498-92e9-e801eaed0325.json
deleted file mode 100644
index 850b0af..0000000
--- a/test/data/enm/study-NWKI-210d0bde-ac61-4498-92e9-e801eaed0325.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-210d0bde-ac61-4498-92e9-e801eaed0325",
- "owner": {
- "substance": {
- "uuid": "NWKI-959963fd-df22-35fb-b821-dd3d74dd40ce"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/tx800289z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 180
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2141b230-1f6c-4cef-a0c0-beeb5ace4344.json b/test/data/enm/study-NWKI-2141b230-1f6c-4cef-a0c0-beeb5ace4344.json
deleted file mode 100644
index 03bb410..0000000
--- a/test/data/enm/study-NWKI-2141b230-1f6c-4cef-a0c0-beeb5ace4344.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-2141b230-1f6c-4cef-a0c0-beeb5ace4344",
- "owner": {
- "substance": {
- "uuid": "NWKI-13b28611-c05b-325b-9e60-182c49b2a288"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es051043o",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002993_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002993",
- "title": "BAO_0002993 Cytotoxicity Assay"
- },
- "endpoint": "Concentration in cell",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Concentration_in_cell",
- "conditions": {
- "Concentration in culture medium": {
- "loValue": 100,
- "unit": "ng/g"
- },
- "Time": {
- "loValue": 3,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 22
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2195cc6b-370b-478d-873c-de64afca349f.json b/test/data/enm/study-NWKI-2195cc6b-370b-478d-873c-de64afca349f.json
deleted file mode 100644
index 93a87a2..0000000
--- a/test/data/enm/study-NWKI-2195cc6b-370b-478d-873c-de64afca349f.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-2195cc6b-370b-478d-873c-de64afca349f",
- "owner": {
- "substance": {
- "uuid": "NWKI-e5b618fd-dd48-3562-9a55-737ac7a68466"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-21c99803-9aea-440c-a82b-070a62e52524.json b/test/data/enm/study-NWKI-21c99803-9aea-440c-a82b-070a62e52524.json
deleted file mode 100644
index 5d1ae15..0000000
--- a/test/data/enm/study-NWKI-21c99803-9aea-440c-a82b-070a62e52524.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-21c99803-9aea-440c-a82b-070a62e52524",
- "owner": {
- "substance": {
- "uuid": "NWKI-df2f5618-fab4-3f50-a191-1eabaa999ff9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -74.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-22544826-1d70-4400-b767-f3b610284346.json b/test/data/enm/study-NWKI-22544826-1d70-4400-b767-f3b610284346.json
deleted file mode 100644
index fb84cb1..0000000
--- a/test/data/enm/study-NWKI-22544826-1d70-4400-b767-f3b610284346.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-22544826-1d70-4400-b767-f3b610284346",
- "owner": {
- "substance": {
- "uuid": "NWKI-7efe542f-264c-3b57-a516-410b730df963"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 28
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-22642000-70c2-48a8-af04-e4b79a86d8e2.json b/test/data/enm/study-NWKI-22642000-70c2-48a8-af04-e4b79a86d8e2.json
deleted file mode 100644
index 9adc489..0000000
--- a/test/data/enm/study-NWKI-22642000-70c2-48a8-af04-e4b79a86d8e2.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-22642000-70c2-48a8-af04-e4b79a86d8e2",
- "owner": {
- "substance": {
- "uuid": "NWKI-4e021275-ae4e-3d24-bdb8-40c6d8d9d6fc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 33
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-226a98c7-2e60-4b2c-b3be-21fe83779526.json b/test/data/enm/study-NWKI-226a98c7-2e60-4b2c-b3be-21fe83779526.json
deleted file mode 100644
index 62aa920..0000000
--- a/test/data/enm/study-NWKI-226a98c7-2e60-4b2c-b3be-21fe83779526.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-226a98c7-2e60-4b2c-b3be-21fe83779526",
- "owner": {
- "substance": {
- "uuid": "NWKI-395bf212-b710-3385-9c23-715a7055b015"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 14
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-229f45c0-1354-4f72-a431-1c07d4f80d0b.json b/test/data/enm/study-NWKI-229f45c0-1354-4f72-a431-1c07d4f80d0b.json
deleted file mode 100644
index 503e497..0000000
--- a/test/data/enm/study-NWKI-229f45c0-1354-4f72-a431-1c07d4f80d0b.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-229f45c0-1354-4f72-a431-1c07d4f80d0b",
- "owner": {
- "substance": {
- "uuid": "NWKI-6821e372-3b17-3a56-8fac-f66115f24e5d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 230
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-230e862e-2402-46e1-9e0a-5ecc057d6695.json b/test/data/enm/study-NWKI-230e862e-2402-46e1-9e0a-5ecc057d6695.json
deleted file mode 100644
index bc07308..0000000
--- a/test/data/enm/study-NWKI-230e862e-2402-46e1-9e0a-5ecc057d6695.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-230e862e-2402-46e1-9e0a-5ecc057d6695",
- "owner": {
- "substance": {
- "uuid": "NWKI-905e44ef-3f7f-314d-add0-3e00439eaded"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 15,
- "upQualifier": "<=",
- "upValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2316021e-2bd1-407f-8db1-10d82a97ce85.json b/test/data/enm/study-NWKI-2316021e-2bd1-407f-8db1-10d82a97ce85.json
deleted file mode 100644
index a85639c..0000000
--- a/test/data/enm/study-NWKI-2316021e-2bd1-407f-8db1-10d82a97ce85.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-2316021e-2bd1-407f-8db1-10d82a97ce85",
- "owner": {
- "substance": {
- "uuid": "NWKI-0866f605-4cfb-32a2-a704-2cf2a8d3d9a6"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 3.45
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-238893d9-0a10-4916-864a-3e29675d036d.json b/test/data/enm/study-NWKI-238893d9-0a10-4916-864a-3e29675d036d.json
deleted file mode 100644
index cd939fb..0000000
--- a/test/data/enm/study-NWKI-238893d9-0a10-4916-864a-3e29675d036d.json
+++ /dev/null
@@ -1,52 +0,0 @@
-{
- "uuid": "NWKI-238893d9-0a10-4916-864a-3e29675d036d",
- "owner": {
- "substance": {
- "uuid": "NWKI-e93603a1-8e0d-372a-8acf-48533b86ecb5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es051043o",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Concentration in culture medium",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Concentration_in_culture_medium",
- "conditions": {
- },
- "result": {
- "unit": "ug/g",
- "loValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-23e79594-2966-47eb-90a7-adebb71c5a1a.json b/test/data/enm/study-NWKI-23e79594-2966-47eb-90a7-adebb71c5a1a.json
deleted file mode 100644
index 169d21d..0000000
--- a/test/data/enm/study-NWKI-23e79594-2966-47eb-90a7-adebb71c5a1a.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-23e79594-2966-47eb-90a7-adebb71c5a1a",
- "owner": {
- "substance": {
- "uuid": "NWKI-fc00f3ef-464d-32d3-9d12-7e78d25db6ce"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -43.4,
- "errorValue": 0.89
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2434304e-6236-4c16-8c91-e2269ef64a82.json b/test/data/enm/study-NWKI-2434304e-6236-4c16-8c91-e2269ef64a82.json
deleted file mode 100644
index b34d87e..0000000
--- a/test/data/enm/study-NWKI-2434304e-6236-4c16-8c91-e2269ef64a82.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-2434304e-6236-4c16-8c91-e2269ef64a82",
- "owner": {
- "substance": {
- "uuid": "NWKI-c2075a8a-c7f2-31df-9d04-1cb096cdfece"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/tx800289z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 10,
- "upQualifier": "<=",
- "upValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-24870f17-e19e-4d4e-a75e-fc1da15715f9.json b/test/data/enm/study-NWKI-24870f17-e19e-4d4e-a75e-fc1da15715f9.json
deleted file mode 100644
index e04bc99..0000000
--- a/test/data/enm/study-NWKI-24870f17-e19e-4d4e-a75e-fc1da15715f9.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-24870f17-e19e-4d4e-a75e-fc1da15715f9",
- "owner": {
- "substance": {
- "uuid": "NWKI-b19125a9-4499-3e0e-aa0c-7792401f4900"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -4.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-24c0ce94-b9bb-4abf-9415-b52defdac67f.json b/test/data/enm/study-NWKI-24c0ce94-b9bb-4abf-9415-b52defdac67f.json
deleted file mode 100644
index 5c6b440..0000000
--- a/test/data/enm/study-NWKI-24c0ce94-b9bb-4abf-9415-b52defdac67f.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-24c0ce94-b9bb-4abf-9415-b52defdac67f",
- "owner": {
- "substance": {
- "uuid": "NWKI-52edeff5-900d-3f5a-86ba-550e9b368239"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 10
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2575d442-a40e-444e-8653-bcb555e99baa.json b/test/data/enm/study-NWKI-2575d442-a40e-444e-8653-bcb555e99baa.json
deleted file mode 100644
index ae799cc..0000000
--- a/test/data/enm/study-NWKI-2575d442-a40e-444e-8653-bcb555e99baa.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-2575d442-a40e-444e-8653-bcb555e99baa",
- "owner": {
- "substance": {
- "uuid": "NWKI-536c91ba-6cf8-3808-b611-f7d5830f5ed8"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390.2011.587903",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 24
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-25d1bdc0-b1e2-4d96-bfdc-f26099585f76.json b/test/data/enm/study-NWKI-25d1bdc0-b1e2-4d96-bfdc-f26099585f76.json
deleted file mode 100644
index 1ccffbd..0000000
--- a/test/data/enm/study-NWKI-25d1bdc0-b1e2-4d96-bfdc-f26099585f76.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-25d1bdc0-b1e2-4d96-bfdc-f26099585f76",
- "owner": {
- "substance": {
- "uuid": "NWKI-88767671-5631-3c93-8cfc-db0f48978e77"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 15,
- "upQualifier": "<=",
- "upValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-26592811-15c2-4a2e-b684-e0849e59ad2d.json b/test/data/enm/study-NWKI-26592811-15c2-4a2e-b684-e0849e59ad2d.json
deleted file mode 100644
index 41513f8..0000000
--- a/test/data/enm/study-NWKI-26592811-15c2-4a2e-b684-e0849e59ad2d.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-26592811-15c2-4a2e-b684-e0849e59ad2d",
- "owner": {
- "substance": {
- "uuid": "NWKI-7b6aae8a-bc39-3794-8140-8d409630c8bc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -59.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-26a723a1-8c78-49d7-a277-7008df754248.json b/test/data/enm/study-NWKI-26a723a1-8c78-49d7-a277-7008df754248.json
deleted file mode 100644
index a7947a4..0000000
--- a/test/data/enm/study-NWKI-26a723a1-8c78-49d7-a277-7008df754248.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-26a723a1-8c78-49d7-a277-7008df754248",
- "owner": {
- "substance": {
- "uuid": "NWKI-0a6e319e-71fc-37f7-b88d-fbda2e07ccc1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 250,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 98
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-26b625c2-f38a-4a2f-b950-0e2c9f7191f7.json b/test/data/enm/study-NWKI-26b625c2-f38a-4a2f-b950-0e2c9f7191f7.json
deleted file mode 100644
index c842d0f..0000000
--- a/test/data/enm/study-NWKI-26b625c2-f38a-4a2f-b950-0e2c9f7191f7.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-26b625c2-f38a-4a2f-b950-0e2c9f7191f7",
- "owner": {
- "substance": {
- "uuid": "NWKI-8667bfb7-a5da-3eb0-b9d7-86e2c8f06f19"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 6,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 4
- }
- },
- "result": {
- "unit": null,
- "loValue": 98
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-26e60e64-968f-4935-af8e-22052f7f09ba.json b/test/data/enm/study-NWKI-26e60e64-968f-4935-af8e-22052f7f09ba.json
deleted file mode 100644
index f383853..0000000
--- a/test/data/enm/study-NWKI-26e60e64-968f-4935-af8e-22052f7f09ba.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-26e60e64-968f-4935-af8e-22052f7f09ba",
- "owner": {
- "substance": {
- "uuid": "NWKI-6b8a44a2-b835-3f75-903c-cf0a71a247c9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es051043o",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002993_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002993",
- "title": "BAO_0002993 Cytotoxicity Assay"
- },
- "endpoint": "Concentration in cell",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Concentration_in_cell",
- "conditions": {
- "Concentration in culture medium": {
- "loValue": 100,
- "unit": "ng/g"
- },
- "Time": {
- "loValue": 1,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 13
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-26e89dc8-26c3-48a9-ad65-a91dec14ef56.json b/test/data/enm/study-NWKI-26e89dc8-26c3-48a9-ad65-a91dec14ef56.json
deleted file mode 100644
index 63c4995..0000000
--- a/test/data/enm/study-NWKI-26e89dc8-26c3-48a9-ad65-a91dec14ef56.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-26e89dc8-26c3-48a9-ad65-a91dec14ef56",
- "owner": {
- "substance": {
- "uuid": "NWKI-3ccff23c-b3d6-3614-aef4-4324be42804b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 12.6,
- "errorValue": 4.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2732ed2c-53c1-4fff-a4f0-b8772e472fcd.json b/test/data/enm/study-NWKI-2732ed2c-53c1-4fff-a4f0-b8772e472fcd.json
deleted file mode 100644
index 9f1fdab..0000000
--- a/test/data/enm/study-NWKI-2732ed2c-53c1-4fff-a4f0-b8772e472fcd.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-2732ed2c-53c1-4fff-a4f0-b8772e472fcd",
- "owner": {
- "substance": {
- "uuid": "NWKI-0455b6e1-5203-37bb-a98b-20460acceda1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-28032d42-937c-499a-bbe2-f4a1da0e89c2.json b/test/data/enm/study-NWKI-28032d42-937c-499a-bbe2-f4a1da0e89c2.json
deleted file mode 100644
index bf9bc1a..0000000
--- a/test/data/enm/study-NWKI-28032d42-937c-499a-bbe2-f4a1da0e89c2.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-28032d42-937c-499a-bbe2-f4a1da0e89c2",
- "owner": {
- "substance": {
- "uuid": "NWKI-52edeff5-900d-3f5a-86ba-550e9b368239"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 1,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-283a4d9f-1ddf-4550-9478-f419b7ff078a.json b/test/data/enm/study-NWKI-283a4d9f-1ddf-4550-9478-f419b7ff078a.json
deleted file mode 100644
index 1223b70..0000000
--- a/test/data/enm/study-NWKI-283a4d9f-1ddf-4550-9478-f419b7ff078a.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-283a4d9f-1ddf-4550-9478-f419b7ff078a",
- "owner": {
- "substance": {
- "uuid": "NWKI-3a3b2bcd-8284-37dc-a619-56ffbd7ebd68"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn2021056",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23.4,
- "errorValue": 4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2857ed00-21b0-4191-9628-dc163ac5ad49.json b/test/data/enm/study-NWKI-2857ed00-21b0-4191-9628-dc163ac5ad49.json
deleted file mode 100644
index a625530..0000000
--- a/test/data/enm/study-NWKI-2857ed00-21b0-4191-9628-dc163ac5ad49.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-2857ed00-21b0-4191-9628-dc163ac5ad49",
- "owner": {
- "substance": {
- "uuid": "NWKI-c2ab6def-8305-3b78-958a-4657b3363e11"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Isoelectric Point",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ISOELECTRIC POINT",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": 5.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2874555f-a89b-4a19-a9b0-c8f5012f0d8b.json b/test/data/enm/study-NWKI-2874555f-a89b-4a19-a9b0-c8f5012f0d8b.json
deleted file mode 100644
index 905dfd4..0000000
--- a/test/data/enm/study-NWKI-2874555f-a89b-4a19-a9b0-c8f5012f0d8b.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-2874555f-a89b-4a19-a9b0-c8f5012f0d8b",
- "owner": {
- "substance": {
- "uuid": "NWKI-4f91db77-4cd0-3482-b989-571d2a9a4228"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn200546k",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 0.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-288222ad-ae6a-4ae7-ab7e-70ffd4433def.json b/test/data/enm/study-NWKI-288222ad-ae6a-4ae7-ab7e-70ffd4433def.json
deleted file mode 100644
index e33abc2..0000000
--- a/test/data/enm/study-NWKI-288222ad-ae6a-4ae7-ab7e-70ffd4433def.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-288222ad-ae6a-4ae7-ab7e-70ffd4433def",
- "owner": {
- "substance": {
- "uuid": "NWKI-ad44f58f-8080-3017-9f8d-485fad044849"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DRhodamine-2DProtamine"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Protamine"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Protamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-28a5b8c8-db90-40ff-89c5-cc9d3cbd176c.json b/test/data/enm/study-NWKI-28a5b8c8-db90-40ff-89c5-cc9d3cbd176c.json
deleted file mode 100644
index 5d1ffe7..0000000
--- a/test/data/enm/study-NWKI-28a5b8c8-db90-40ff-89c5-cc9d3cbd176c.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-28a5b8c8-db90-40ff-89c5-cc9d3cbd176c",
- "owner": {
- "substance": {
- "uuid": "NWKI-812e122b-8bee-350d-8aea-aaaa88ce84dd"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 200,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-28d2fca5-1d49-4401-aa15-afbcddb14154.json b/test/data/enm/study-NWKI-28d2fca5-1d49-4401-aa15-afbcddb14154.json
deleted file mode 100644
index 100866e..0000000
--- a/test/data/enm/study-NWKI-28d2fca5-1d49-4401-aa15-afbcddb14154.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-28d2fca5-1d49-4401-aa15-afbcddb14154",
- "owner": {
- "substance": {
- "uuid": "NWKI-5a049bb7-380d-3c89-9c39-f1310ed7b09d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 92,
- "errorValue": 2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-28f4d696-5c08-414c-933a-4ab55dff076f.json b/test/data/enm/study-NWKI-28f4d696-5c08-414c-933a-4ab55dff076f.json
deleted file mode 100644
index b544a7a..0000000
--- a/test/data/enm/study-NWKI-28f4d696-5c08-414c-933a-4ab55dff076f.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-28f4d696-5c08-414c-933a-4ab55dff076f",
- "owner": {
- "substance": {
- "uuid": "NWKI-8ef21404-e101-37c8-8206-32f526d75012"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 200,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-29902ba0-0a8c-4a93-bd2f-1301b08b1278.json b/test/data/enm/study-NWKI-29902ba0-0a8c-4a93-bd2f-1301b08b1278.json
deleted file mode 100644
index 98f0a7b..0000000
--- a/test/data/enm/study-NWKI-29902ba0-0a8c-4a93-bd2f-1301b08b1278.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-29902ba0-0a8c-4a93-bd2f-1301b08b1278",
- "owner": {
- "substance": {
- "uuid": "NWKI-83a75181-9103-3ef9-aec7-fa38074580f6"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 3.37,
- "errorValue": 0.57
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-299853db-1973-4a85-9ae2-f85e7cd5c8f1.json b/test/data/enm/study-NWKI-299853db-1973-4a85-9ae2-f85e7cd5c8f1.json
deleted file mode 100644
index 32a97ae..0000000
--- a/test/data/enm/study-NWKI-299853db-1973-4a85-9ae2-f85e7cd5c8f1.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-299853db-1973-4a85-9ae2-f85e7cd5c8f1",
- "owner": {
- "substance": {
- "uuid": "NWKI-ede00e9f-201f-33c9-9191-8dbf67fcf1b1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "CdSe"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "CdSe"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "COOH-2DAmphPolymer"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Amphiphillic_Polymer"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Amphiphillic_Polymer"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-299b892c-97fc-43f6-985c-768a7c84f287.json b/test/data/enm/study-NWKI-299b892c-97fc-43f6-985c-768a7c84f287.json
deleted file mode 100644
index 0033a71..0000000
--- a/test/data/enm/study-NWKI-299b892c-97fc-43f6-985c-768a7c84f287.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-299b892c-97fc-43f6-985c-768a7c84f287",
- "owner": {
- "substance": {
- "uuid": "NWKI-5454d5cb-1033-3d6f-a31e-038752525533"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Mean Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 108
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-299d8d27-4b6a-4b9c-a500-28ede35d570e.json b/test/data/enm/study-NWKI-299d8d27-4b6a-4b9c-a500-28ede35d570e.json
deleted file mode 100644
index 9d6f5e8..0000000
--- a/test/data/enm/study-NWKI-299d8d27-4b6a-4b9c-a500-28ede35d570e.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-299d8d27-4b6a-4b9c-a500-28ede35d570e",
- "owner": {
- "substance": {
- "uuid": "NWKI-3db8eb74-b206-31ad-8c1b-3569703c47cb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 60,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 24
- }
- },
- "result": {
- "unit": null,
- "loValue": 97
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-299db44e-27a2-4aba-9c25-a1ae9a9e2959.json b/test/data/enm/study-NWKI-299db44e-27a2-4aba-9c25-a1ae9a9e2959.json
deleted file mode 100644
index 7c5ff81..0000000
--- a/test/data/enm/study-NWKI-299db44e-27a2-4aba-9c25-a1ae9a9e2959.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-299db44e-27a2-4aba-9c25-a1ae9a9e2959",
- "owner": {
- "substance": {
- "uuid": "NWKI-d8f70c6c-3496-3ad3-8ab3-e4f08a178d30"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 2000,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-29bb615b-97c3-48e8-b04c-9b3c0e6d3dc2.json b/test/data/enm/study-NWKI-29bb615b-97c3-48e8-b04c-9b3c0e6d3dc2.json
deleted file mode 100644
index a3c44b3..0000000
--- a/test/data/enm/study-NWKI-29bb615b-97c3-48e8-b04c-9b3c0e6d3dc2.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-29bb615b-97c3-48e8-b04c-9b3c0e6d3dc2",
- "owner": {
- "substance": {
- "uuid": "NWKI-b14e37d1-8dbb-36d7-925c-4093c91a0e92"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 10
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-29e445cd-20bf-491f-9be4-03a72f03db02.json b/test/data/enm/study-NWKI-29e445cd-20bf-491f-9be4-03a72f03db02.json
deleted file mode 100644
index 9929a6b..0000000
--- a/test/data/enm/study-NWKI-29e445cd-20bf-491f-9be4-03a72f03db02.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-29e445cd-20bf-491f-9be4-03a72f03db02",
- "owner": {
- "substance": {
- "uuid": "NWKI-4832de65-5a92-3849-8061-729a2d83017e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 320
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2a0a9364-2a37-40e6-9608-9a035483cef9.json b/test/data/enm/study-NWKI-2a0a9364-2a37-40e6-9608-9a035483cef9.json
deleted file mode 100644
index 8f84fc4..0000000
--- a/test/data/enm/study-NWKI-2a0a9364-2a37-40e6-9608-9a035483cef9.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-2a0a9364-2a37-40e6-9608-9a035483cef9",
- "owner": {
- "substance": {
- "uuid": "NWKI-905e44ef-3f7f-314d-add0-3e00439eaded"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 3.45
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2a6c5f39-8eec-4b37-ae56-7f0b1f2fa52f.json b/test/data/enm/study-NWKI-2a6c5f39-8eec-4b37-ae56-7f0b1f2fa52f.json
deleted file mode 100644
index 0af9ac7..0000000
--- a/test/data/enm/study-NWKI-2a6c5f39-8eec-4b37-ae56-7f0b1f2fa52f.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-2a6c5f39-8eec-4b37-ae56-7f0b1f2fa52f",
- "owner": {
- "substance": {
- "uuid": "NWKI-3068a619-f77c-3f33-848a-7b4248f6c52c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -48.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2a93ff70-da43-42ff-8333-ae1552a0e9fa.json b/test/data/enm/study-NWKI-2a93ff70-da43-42ff-8333-ae1552a0e9fa.json
deleted file mode 100644
index dcb89c0..0000000
--- a/test/data/enm/study-NWKI-2a93ff70-da43-42ff-8333-ae1552a0e9fa.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-2a93ff70-da43-42ff-8333-ae1552a0e9fa",
- "owner": {
- "substance": {
- "uuid": "NWKI-8ef21404-e101-37c8-8206-32f526d75012"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 50,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2ac5ee28-7aa5-44eb-be7a-8cb8b102c3b5.json b/test/data/enm/study-NWKI-2ac5ee28-7aa5-44eb-be7a-8cb8b102c3b5.json
deleted file mode 100644
index 87a9b13..0000000
--- a/test/data/enm/study-NWKI-2ac5ee28-7aa5-44eb-be7a-8cb8b102c3b5.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-2ac5ee28-7aa5-44eb-be7a-8cb8b102c3b5",
- "owner": {
- "substance": {
- "uuid": "NWKI-57a03b07-0bb6-306c-ba30-71d5bc626385"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.soilbio.2013.01.016",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loQualifier": ">=",
- "loValue": 40
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2b0e084f-2f89-41f0-a01c-72d89c23f175.json b/test/data/enm/study-NWKI-2b0e084f-2f89-41f0-a01c-72d89c23f175.json
deleted file mode 100644
index fd5f077..0000000
--- a/test/data/enm/study-NWKI-2b0e084f-2f89-41f0-a01c-72d89c23f175.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "uuid": "NWKI-2b0e084f-2f89-41f0-a01c-72d89c23f175",
- "owner": {
- "substance": {
- "uuid": "NWKI-6cab56b4-69d9-36e0-8c17-f467d08b2555"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe2O3"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe2O3"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "COOH-2DPVA"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "COOH"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "O=CO[H]"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "COOH"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2bacd054-36df-4ea5-810c-0de08179cbf3.json b/test/data/enm/study-NWKI-2bacd054-36df-4ea5-810c-0de08179cbf3.json
deleted file mode 100644
index d82609a..0000000
--- a/test/data/enm/study-NWKI-2bacd054-36df-4ea5-810c-0de08179cbf3.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-2bacd054-36df-4ea5-810c-0de08179cbf3",
- "owner": {
- "substance": {
- "uuid": "NWKI-3481f716-18fa-39b3-aa54-4acb67877194"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DGlycine"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2bf27a2e-1693-4d61-9d4f-85904590957c.json b/test/data/enm/study-NWKI-2bf27a2e-1693-4d61-9d4f-85904590957c.json
deleted file mode 100644
index 28183ba..0000000
--- a/test/data/enm/study-NWKI-2bf27a2e-1693-4d61-9d4f-85904590957c.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-2bf27a2e-1693-4d61-9d4f-85904590957c",
- "owner": {
- "substance": {
- "uuid": "NWKI-b4bd899e-c57e-3aaa-bf6f-54ec8ebd6ab5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 50
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2c19a322-a657-435a-9de7-b768efa0de5d.json b/test/data/enm/study-NWKI-2c19a322-a657-435a-9de7-b768efa0de5d.json
deleted file mode 100644
index 773df98..0000000
--- a/test/data/enm/study-NWKI-2c19a322-a657-435a-9de7-b768efa0de5d.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-2c19a322-a657-435a-9de7-b768efa0de5d",
- "owner": {
- "substance": {
- "uuid": "NWKI-13b28611-c05b-325b-9e60-182c49b2a288"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es051043o",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 80,
- "upQualifier": "<=",
- "upValue": 150
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2c886612-ba50-4458-b3dc-b0e9da77ee63.json b/test/data/enm/study-NWKI-2c886612-ba50-4458-b3dc-b0e9da77ee63.json
deleted file mode 100644
index 26587d9..0000000
--- a/test/data/enm/study-NWKI-2c886612-ba50-4458-b3dc-b0e9da77ee63.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-2c886612-ba50-4458-b3dc-b0e9da77ee63",
- "owner": {
- "substance": {
- "uuid": "NWKI-8a4b3e23-3327-3421-b20a-2e71939b44b1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DFITC-2DGlutamicAcid"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "FITC"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "FITC"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2caa1583-ad03-4f9c-adb2-d8fb7dd299f3.json b/test/data/enm/study-NWKI-2caa1583-ad03-4f9c-adb2-d8fb7dd299f3.json
deleted file mode 100644
index 8ff3c75..0000000
--- a/test/data/enm/study-NWKI-2caa1583-ad03-4f9c-adb2-d8fb7dd299f3.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-2caa1583-ad03-4f9c-adb2-d8fb7dd299f3",
- "owner": {
- "substance": {
- "uuid": "NWKI-3fb9be70-8c15-3b78-94e7-5c3c88799818"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -4.22
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2da0ea19-ca30-4b3f-b1f0-19a5790c1621.json b/test/data/enm/study-NWKI-2da0ea19-ca30-4b3f-b1f0-19a5790c1621.json
deleted file mode 100644
index aeabd95..0000000
--- a/test/data/enm/study-NWKI-2da0ea19-ca30-4b3f-b1f0-19a5790c1621.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-2da0ea19-ca30-4b3f-b1f0-19a5790c1621",
- "owner": {
- "substance": {
- "uuid": "NWKI-8a968835-50ab-33df-bf5e-42de32d01c15"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Colon HT29",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 6,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 8
- }
- },
- "result": {
- "unit": null,
- "loValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2dbb5798-e811-4968-9496-da98b03ad991.json b/test/data/enm/study-NWKI-2dbb5798-e811-4968-9496-da98b03ad991.json
deleted file mode 100644
index 532618b..0000000
--- a/test/data/enm/study-NWKI-2dbb5798-e811-4968-9496-da98b03ad991.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-2dbb5798-e811-4968-9496-da98b03ad991",
- "owner": {
- "substance": {
- "uuid": "NWKI-b14e37d1-8dbb-36d7-925c-4093c91a0e92"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 150,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2def1a31-61ca-499f-bdf0-374670910a81.json b/test/data/enm/study-NWKI-2def1a31-61ca-499f-bdf0-374670910a81.json
deleted file mode 100644
index 6476a17..0000000
--- a/test/data/enm/study-NWKI-2def1a31-61ca-499f-bdf0-374670910a81.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-2def1a31-61ca-499f-bdf0-374670910a81",
- "owner": {
- "substance": {
- "uuid": "NWKI-a33b26f0-2fc7-3aa1-9dd6-27380f725bfe"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 15,
- "upQualifier": "<=",
- "upValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2dfbca11-00fc-49c9-876b-6be628025350.json b/test/data/enm/study-NWKI-2dfbca11-00fc-49c9-876b-6be628025350.json
deleted file mode 100644
index 058de7b..0000000
--- a/test/data/enm/study-NWKI-2dfbca11-00fc-49c9-876b-6be628025350.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-2dfbca11-00fc-49c9-876b-6be628025350",
- "owner": {
- "substance": {
- "uuid": "NWKI-155bb96c-2d7e-384d-b55d-45856eeda386"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.15
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2e105bec-9f2f-456d-85ad-0f01e08dacb6.json b/test/data/enm/study-NWKI-2e105bec-9f2f-456d-85ad-0f01e08dacb6.json
deleted file mode 100644
index c2f57dc..0000000
--- a/test/data/enm/study-NWKI-2e105bec-9f2f-456d-85ad-0f01e08dacb6.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-2e105bec-9f2f-456d-85ad-0f01e08dacb6",
- "owner": {
- "substance": {
- "uuid": "NWKI-e93603a1-8e0d-372a-8acf-48533b86ecb5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es051043o",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002993_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002993",
- "title": "BAO_0002993 Cytotoxicity Assay"
- },
- "endpoint": "Concentration in cell",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Concentration_in_cell",
- "conditions": {
- "Concentration in culture medium": {
- "loValue": 100,
- "unit": "ng/g"
- },
- "Time": {
- "loValue": 10,
- "unit": "m"
- }
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2e9983eb-ea2c-4fbf-a1a3-4fedbc871d87.json b/test/data/enm/study-NWKI-2e9983eb-ea2c-4fbf-a1a3-4fedbc871d87.json
deleted file mode 100644
index 2d7b0f2..0000000
--- a/test/data/enm/study-NWKI-2e9983eb-ea2c-4fbf-a1a3-4fedbc871d87.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-2e9983eb-ea2c-4fbf-a1a3-4fedbc871d87",
- "owner": {
- "substance": {
- "uuid": "NWKI-0494174f-9fc2-3296-8ffb-4fadaceb0348"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn202116p",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 617,
- "errorValue": 27
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2f1f62b2-8f0f-422f-a2ae-1ad5229a1fe1.json b/test/data/enm/study-NWKI-2f1f62b2-8f0f-422f-a2ae-1ad5229a1fe1.json
deleted file mode 100644
index 876420b..0000000
--- a/test/data/enm/study-NWKI-2f1f62b2-8f0f-422f-a2ae-1ad5229a1fe1.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-2f1f62b2-8f0f-422f-a2ae-1ad5229a1fe1",
- "owner": {
- "substance": {
- "uuid": "NWKI-2390517f-b763-3850-b1b4-6e50fee63829"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.81
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2f252609-ec14-4014-b4ff-5f062deb4fdd.json b/test/data/enm/study-NWKI-2f252609-ec14-4014-b4ff-5f062deb4fdd.json
deleted file mode 100644
index 8273cc0..0000000
--- a/test/data/enm/study-NWKI-2f252609-ec14-4014-b4ff-5f062deb4fdd.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-2f252609-ec14-4014-b4ff-5f062deb4fdd",
- "owner": {
- "substance": {
- "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Colon HT29",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 6,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 4
- }
- },
- "result": {
- "unit": null,
- "loValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2f590895-a505-4ac2-890c-491a0a2f4eeb.json b/test/data/enm/study-NWKI-2f590895-a505-4ac2-890c-491a0a2f4eeb.json
deleted file mode 100644
index 97151d5..0000000
--- a/test/data/enm/study-NWKI-2f590895-a505-4ac2-890c-491a0a2f4eeb.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-2f590895-a505-4ac2-890c-491a0a2f4eeb",
- "owner": {
- "substance": {
- "uuid": "NWKI-458c2d5a-53f0-3c65-81eb-6fb5d128db59"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 378,
- "errorValue": 70
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-2f67c03b-e137-475e-b8e1-f7147b2f0734.json b/test/data/enm/study-NWKI-2f67c03b-e137-475e-b8e1-f7147b2f0734.json
deleted file mode 100644
index d5e8143..0000000
--- a/test/data/enm/study-NWKI-2f67c03b-e137-475e-b8e1-f7147b2f0734.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-2f67c03b-e137-475e-b8e1-f7147b2f0734",
- "owner": {
- "substance": {
- "uuid": "NWKI-c012600e-ca8e-31db-a7a8-d9f6a74e2464"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 12
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-304bf941-2d4e-4069-bc64-c2ca8b68338a.json b/test/data/enm/study-NWKI-304bf941-2d4e-4069-bc64-c2ca8b68338a.json
deleted file mode 100644
index 0ee034b..0000000
--- a/test/data/enm/study-NWKI-304bf941-2d4e-4069-bc64-c2ca8b68338a.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-304bf941-2d4e-4069-bc64-c2ca8b68338a",
- "owner": {
- "substance": {
- "uuid": "NWKI-11ae9232-1521-31d6-9466-c902c43d94fe"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 28
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-308b284b-e2ae-4f73-a350-d0deb35cb0b2.json b/test/data/enm/study-NWKI-308b284b-e2ae-4f73-a350-d0deb35cb0b2.json
deleted file mode 100644
index 63d0d97..0000000
--- a/test/data/enm/study-NWKI-308b284b-e2ae-4f73-a350-d0deb35cb0b2.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-308b284b-e2ae-4f73-a350-d0deb35cb0b2",
- "owner": {
- "substance": {
- "uuid": "NWKI-8196e92b-c46d-3c14-9410-e87992810710"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 20,
- "upQualifier": "<=",
- "upValue": 60
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-30a5f8ec-7758-4f6e-bf77-fc75108fd1fb.json b/test/data/enm/study-NWKI-30a5f8ec-7758-4f6e-bf77-fc75108fd1fb.json
deleted file mode 100644
index c73f6dc..0000000
--- a/test/data/enm/study-NWKI-30a5f8ec-7758-4f6e-bf77-fc75108fd1fb.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-30a5f8ec-7758-4f6e-bf77-fc75108fd1fb",
- "owner": {
- "substance": {
- "uuid": "NWKI-ad44f58f-8080-3017-9f8d-485fad044849"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-30d9478c-941f-4174-bdf0-48841c418f1a.json b/test/data/enm/study-NWKI-30d9478c-941f-4174-bdf0-48841c418f1a.json
deleted file mode 100644
index d85e372..0000000
--- a/test/data/enm/study-NWKI-30d9478c-941f-4174-bdf0-48841c418f1a.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-30d9478c-941f-4174-bdf0-48841c418f1a",
- "owner": {
- "substance": {
- "uuid": "NWKI-8ef21404-e101-37c8-8206-32f526d75012"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 1,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-315aa68b-5450-4657-8545-0a894a6c662e.json b/test/data/enm/study-NWKI-315aa68b-5450-4657-8545-0a894a6c662e.json
deleted file mode 100644
index db1f49b..0000000
--- a/test/data/enm/study-NWKI-315aa68b-5450-4657-8545-0a894a6c662e.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-315aa68b-5450-4657-8545-0a894a6c662e",
- "owner": {
- "substance": {
- "uuid": "NWKI-984a9c7f-2372-3b8f-9ff5-93a9f94f2eb7"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn202116p",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 855,
- "errorValue": 37
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-316b62f2-31bc-4b10-a967-48c9be7cd6be.json b/test/data/enm/study-NWKI-316b62f2-31bc-4b10-a967-48c9be7cd6be.json
deleted file mode 100644
index 8f1a964..0000000
--- a/test/data/enm/study-NWKI-316b62f2-31bc-4b10-a967-48c9be7cd6be.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-316b62f2-31bc-4b10-a967-48c9be7cd6be",
- "owner": {
- "substance": {
- "uuid": "NWKI-56d49cc3-4a76-354b-9a77-4b2ecb2dbef0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "LDH Release",
- "guideline": [
- "Lactate Dehydrogenase Activity"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Lactate Dehydrogenase Activity"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "LDH_Release",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 80,
- "unit": "ug/cm^2"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-31812e13-570d-4bf0-8c6d-5635218c8fb5.json b/test/data/enm/study-NWKI-31812e13-570d-4bf0-8c6d-5635218c8fb5.json
deleted file mode 100644
index d616a39..0000000
--- a/test/data/enm/study-NWKI-31812e13-570d-4bf0-8c6d-5635218c8fb5.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-31812e13-570d-4bf0-8c6d-5635218c8fb5",
- "owner": {
- "substance": {
- "uuid": "NWKI-9fb12a3a-3a26-3f95-82ed-371f58d92dfe"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 205,
- "errorValue": 20.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-318a63ca-3312-41f8-8896-0f20a7cc8b10.json b/test/data/enm/study-NWKI-318a63ca-3312-41f8-8896-0f20a7cc8b10.json
deleted file mode 100644
index 7648321..0000000
--- a/test/data/enm/study-NWKI-318a63ca-3312-41f8-8896-0f20a7cc8b10.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-318a63ca-3312-41f8-8896-0f20a7cc8b10",
- "owner": {
- "substance": {
- "uuid": "NWKI-cad5bf58-cc90-33e5-88bb-bad4c9f9fe9e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DCY5"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3225cb74-4a8d-4395-b54e-4e82b7314e3a.json b/test/data/enm/study-NWKI-3225cb74-4a8d-4395-b54e-4e82b7314e3a.json
deleted file mode 100644
index 373adeb..0000000
--- a/test/data/enm/study-NWKI-3225cb74-4a8d-4395-b54e-4e82b7314e3a.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-3225cb74-4a8d-4395-b54e-4e82b7314e3a",
- "owner": {
- "substance": {
- "uuid": "NWKI-99fe068d-e343-35f8-9cc9-06c3a3cf8e22"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 51.5,
- "errorValue": 7.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-327518e0-53d1-4c5c-9c94-a80e3d43f535.json b/test/data/enm/study-NWKI-327518e0-53d1-4c5c-9c94-a80e3d43f535.json
deleted file mode 100644
index ee347fd..0000000
--- a/test/data/enm/study-NWKI-327518e0-53d1-4c5c-9c94-a80e3d43f535.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-327518e0-53d1-4c5c-9c94-a80e3d43f535",
- "owner": {
- "substance": {
- "uuid": "NWKI-ea2bb63b-fd2a-32c2-a41a-d0280abaf29f"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 3.51
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-32b90f7e-f71d-4748-8903-1afe74263c9b.json b/test/data/enm/study-NWKI-32b90f7e-f71d-4748-8903-1afe74263c9b.json
deleted file mode 100644
index 6d21b72..0000000
--- a/test/data/enm/study-NWKI-32b90f7e-f71d-4748-8903-1afe74263c9b.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-32b90f7e-f71d-4748-8903-1afe74263c9b",
- "owner": {
- "substance": {
- "uuid": "NWKI-8ef21404-e101-37c8-8206-32f526d75012"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 150,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-32ed71dd-3d4e-4bbb-9ca1-dcf617d6a280.json b/test/data/enm/study-NWKI-32ed71dd-3d4e-4bbb-9ca1-dcf617d6a280.json
deleted file mode 100644
index c769cee..0000000
--- a/test/data/enm/study-NWKI-32ed71dd-3d4e-4bbb-9ca1-dcf617d6a280.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-32ed71dd-3d4e-4bbb-9ca1-dcf617d6a280",
- "owner": {
- "substance": {
- "uuid": "NWKI-52edeff5-900d-3f5a-86ba-550e9b368239"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-35426c83-c6fb-4f54-b3a5-380884d1bafa.json b/test/data/enm/study-NWKI-35426c83-c6fb-4f54-b3a5-380884d1bafa.json
deleted file mode 100644
index ab67ec2..0000000
--- a/test/data/enm/study-NWKI-35426c83-c6fb-4f54-b3a5-380884d1bafa.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-35426c83-c6fb-4f54-b3a5-380884d1bafa",
- "owner": {
- "substance": {
- "uuid": "NWKI-e4dab3d9-2699-3a0b-9e9c-f257088142cc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 1.6,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-35624d25-940c-4ca1-8342-b3a41a43323f.json b/test/data/enm/study-NWKI-35624d25-940c-4ca1-8342-b3a41a43323f.json
deleted file mode 100644
index 4861fc9..0000000
--- a/test/data/enm/study-NWKI-35624d25-940c-4ca1-8342-b3a41a43323f.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-35624d25-940c-4ca1-8342-b3a41a43323f",
- "owner": {
- "substance": {
- "uuid": "NWKI-e24378b0-c0bb-365a-b533-e8f303681c2e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390.2011.587903",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 142
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-35e268e0-2d8f-4904-8a92-34016c907cf4.json b/test/data/enm/study-NWKI-35e268e0-2d8f-4904-8a92-34016c907cf4.json
deleted file mode 100644
index 4f7b72f..0000000
--- a/test/data/enm/study-NWKI-35e268e0-2d8f-4904-8a92-34016c907cf4.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-35e268e0-2d8f-4904-8a92-34016c907cf4",
- "owner": {
- "substance": {
- "uuid": "NWKI-895a506b-c331-3576-bf9e-cbcde5822c11"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null,
- "Serum": {
- "loValue": "sfMEM"
- }
- },
- "result": {
- "unit": "nm",
- "loValue": 63
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-35e8ff01-974c-41f8-8129-48cc4a203144.json b/test/data/enm/study-NWKI-35e8ff01-974c-41f8-8129-48cc4a203144.json
deleted file mode 100644
index 2d047d8..0000000
--- a/test/data/enm/study-NWKI-35e8ff01-974c-41f8-8129-48cc4a203144.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-35e8ff01-974c-41f8-8129-48cc4a203144",
- "owner": {
- "substance": {
- "uuid": "NWKI-6b1b44fa-70c1-3034-9c4b-7efb334762e0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 22
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-36c3f16a-3250-40ca-b265-e0b23202a5ce.json b/test/data/enm/study-NWKI-36c3f16a-3250-40ca-b265-e0b23202a5ce.json
deleted file mode 100644
index 0d4a060..0000000
--- a/test/data/enm/study-NWKI-36c3f16a-3250-40ca-b265-e0b23202a5ce.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-36c3f16a-3250-40ca-b265-e0b23202a5ce",
- "owner": {
- "substance": {
- "uuid": "NWKI-8c5b9350-2c03-3173-9615-cabfbe6929c9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 14
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-378cd8d0-d9a4-4700-8fda-0c27fb863dd4.json b/test/data/enm/study-NWKI-378cd8d0-d9a4-4700-8fda-0c27fb863dd4.json
deleted file mode 100644
index d404c05..0000000
--- a/test/data/enm/study-NWKI-378cd8d0-d9a4-4700-8fda-0c27fb863dd4.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-378cd8d0-d9a4-4700-8fda-0c27fb863dd4",
- "owner": {
- "substance": {
- "uuid": "NWKI-b14e37d1-8dbb-36d7-925c-4093c91a0e92"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 1,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3811859b-4696-4635-8556-d86a07808072.json b/test/data/enm/study-NWKI-3811859b-4696-4635-8556-d86a07808072.json
deleted file mode 100644
index fbc8fe2..0000000
--- a/test/data/enm/study-NWKI-3811859b-4696-4635-8556-d86a07808072.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-3811859b-4696-4635-8556-d86a07808072",
- "owner": {
- "substance": {
- "uuid": "NWKI-88767671-5631-3c93-8cfc-db0f48978e77"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.87
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-381ff327-4da8-4176-8e57-fa95e52c570d.json b/test/data/enm/study-NWKI-381ff327-4da8-4176-8e57-fa95e52c570d.json
deleted file mode 100644
index 4345a50..0000000
--- a/test/data/enm/study-NWKI-381ff327-4da8-4176-8e57-fa95e52c570d.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-381ff327-4da8-4176-8e57-fa95e52c570d",
- "owner": {
- "substance": {
- "uuid": "NWKI-666817c2-87cb-3826-92f8-e79a7b37957d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "Shape",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Rutile"
- },
- "effects": [
- {
- "endpoint": "SHAPE",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": null,
- "textValue": "Rutile"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3825451c-f85b-45a4-b830-199dcdb54aff.json b/test/data/enm/study-NWKI-3825451c-f85b-45a4-b830-199dcdb54aff.json
deleted file mode 100644
index d8c5bbd..0000000
--- a/test/data/enm/study-NWKI-3825451c-f85b-45a4-b830-199dcdb54aff.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "NWKI-3825451c-f85b-45a4-b830-199dcdb54aff",
- "owner": {
- "substance": {
- "uuid": "NWKI-ec00c05f-0b35-3c5a-b16f-7a3560213764"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DFTIC-2DSI"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Succinimidyl_Iodoacatate"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "C1CC(=O)N(C1=O)OC(=O)CI"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Succinimidyl_Iodoacatate"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-38294160-f5b6-4f9e-9ac2-f795767b42ea.json b/test/data/enm/study-NWKI-38294160-f5b6-4f9e-9ac2-f795767b42ea.json
deleted file mode 100644
index 93bea10..0000000
--- a/test/data/enm/study-NWKI-38294160-f5b6-4f9e-9ac2-f795767b42ea.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-38294160-f5b6-4f9e-9ac2-f795767b42ea",
- "owner": {
- "substance": {
- "uuid": "NWKI-02981dd4-b7d0-34c8-a0ab-dd19a5a40865"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -13.6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3941a35c-3571-4154-a31d-354556e86453.json b/test/data/enm/study-NWKI-3941a35c-3571-4154-a31d-354556e86453.json
deleted file mode 100644
index 28ff9bb..0000000
--- a/test/data/enm/study-NWKI-3941a35c-3571-4154-a31d-354556e86453.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-3941a35c-3571-4154-a31d-354556e86453",
- "owner": {
- "substance": {
- "uuid": "NWKI-e866549e-38cf-3b98-a0b1-a483e275d261"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1080/10934520600966177",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "Shape",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Spherical"
- },
- "effects": [
- {
- "endpoint": "SHAPE",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": null,
- "textValue": "Spherical"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-395ec63b-e8b2-420c-9731-683645537ff6.json b/test/data/enm/study-NWKI-395ec63b-e8b2-420c-9731-683645537ff6.json
deleted file mode 100644
index 3308c1a..0000000
--- a/test/data/enm/study-NWKI-395ec63b-e8b2-420c-9731-683645537ff6.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-395ec63b-e8b2-420c-9731-683645537ff6",
- "owner": {
- "substance": {
- "uuid": "NWKI-8090df08-f0f9-3c2f-8769-b51c2adaffc1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -29.4,
- "errorValue": 5.62
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3988370f-7a39-4e7a-b55f-c15c3587bbec.json b/test/data/enm/study-NWKI-3988370f-7a39-4e7a-b55f-c15c3587bbec.json
deleted file mode 100644
index 92ea406..0000000
--- a/test/data/enm/study-NWKI-3988370f-7a39-4e7a-b55f-c15c3587bbec.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-3988370f-7a39-4e7a-b55f-c15c3587bbec",
- "owner": {
- "substance": {
- "uuid": "NWKI-77fb742b-c676-3ad7-bd19-6d5ec1df62ad"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DED-2DVT680"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "VT680"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "VT680"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3a1fc931-dd5d-43d5-9d84-734b4307e1b6.json b/test/data/enm/study-NWKI-3a1fc931-dd5d-43d5-9d84-734b4307e1b6.json
deleted file mode 100644
index cb24f74..0000000
--- a/test/data/enm/study-NWKI-3a1fc931-dd5d-43d5-9d84-734b4307e1b6.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-3a1fc931-dd5d-43d5-9d84-734b4307e1b6",
- "owner": {
- "substance": {
- "uuid": "NWKI-0fef8d9c-b0c4-3e41-88d0-b85cd538a796"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.74
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3a9bf0cc-82f7-4340-b6b5-f908a9f7089c.json b/test/data/enm/study-NWKI-3a9bf0cc-82f7-4340-b6b5-f908a9f7089c.json
deleted file mode 100644
index ed2c837..0000000
--- a/test/data/enm/study-NWKI-3a9bf0cc-82f7-4340-b6b5-f908a9f7089c.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-3a9bf0cc-82f7-4340-b6b5-f908a9f7089c",
- "owner": {
- "substance": {
- "uuid": "NWKI-f40bfb8a-1280-35a2-866c-42b5a3ce13e7"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 15,
- "upQualifier": "<=",
- "upValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3ab749d1-ef02-4896-884f-3a95ed8c5601.json b/test/data/enm/study-NWKI-3ab749d1-ef02-4896-884f-3a95ed8c5601.json
deleted file mode 100644
index 4213f6a..0000000
--- a/test/data/enm/study-NWKI-3ab749d1-ef02-4896-884f-3a95ed8c5601.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-3ab749d1-ef02-4896-884f-3a95ed8c5601",
- "owner": {
- "substance": {
- "uuid": "NWKI-bbb67d89-eaff-38ab-ba4f-403bfb064a0c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DED-2DSuccAminoSPARK680"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PVA"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3ae0012d-9a09-4654-97db-cf210abc97cb.json b/test/data/enm/study-NWKI-3ae0012d-9a09-4654-97db-cf210abc97cb.json
deleted file mode 100644
index 9b82bc4..0000000
--- a/test/data/enm/study-NWKI-3ae0012d-9a09-4654-97db-cf210abc97cb.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-3ae0012d-9a09-4654-97db-cf210abc97cb",
- "owner": {
- "substance": {
- "uuid": "NWKI-69b604fb-e892-31ba-a6f5-feb6cb04effb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DAF750"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "AlexaFluor750"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "AlexaFluor750"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3bcc3eab-4c4a-4e2c-bfe9-889d5697cd00.json b/test/data/enm/study-NWKI-3bcc3eab-4c4a-4e2c-bfe9-889d5697cd00.json
deleted file mode 100644
index 6a9f8c5..0000000
--- a/test/data/enm/study-NWKI-3bcc3eab-4c4a-4e2c-bfe9-889d5697cd00.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "uuid": "NWKI-3bcc3eab-4c4a-4e2c-bfe9-889d5697cd00",
- "owner": {
- "substance": {
- "uuid": "NWKI-e834e3f1-8c0d-319e-9bac-21c613bdccd0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Ag"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Ag"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "TMATCoating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "TMAT"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "SCC[N+](C)(C)C.[I-]"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "TMAT"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3c3b9140-6c10-4a7a-a15e-13f9f9b006a5.json b/test/data/enm/study-NWKI-3c3b9140-6c10-4a7a-a15e-13f9f9b006a5.json
deleted file mode 100644
index 12c6e89..0000000
--- a/test/data/enm/study-NWKI-3c3b9140-6c10-4a7a-a15e-13f9f9b006a5.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-3c3b9140-6c10-4a7a-a15e-13f9f9b006a5",
- "owner": {
- "substance": {
- "uuid": "NWKI-05ce8604-4efc-376b-a88f-338a90465243"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390.2015.1017022",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Diameter",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Diameter",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 74,
- "errorValue": 28
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3c42f5fc-0968-4903-98b7-73cfc8889d94.json b/test/data/enm/study-NWKI-3c42f5fc-0968-4903-98b7-73cfc8889d94.json
deleted file mode 100644
index fcb4697..0000000
--- a/test/data/enm/study-NWKI-3c42f5fc-0968-4903-98b7-73cfc8889d94.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-3c42f5fc-0968-4903-98b7-73cfc8889d94",
- "owner": {
- "substance": {
- "uuid": "NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 25,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3c50948f-f6fe-4734-b2ae-3e3b0442384b.json b/test/data/enm/study-NWKI-3c50948f-f6fe-4734-b2ae-3e3b0442384b.json
deleted file mode 100644
index 0687593..0000000
--- a/test/data/enm/study-NWKI-3c50948f-f6fe-4734-b2ae-3e3b0442384b.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-3c50948f-f6fe-4734-b2ae-3e3b0442384b",
- "owner": {
- "substance": {
- "uuid": "NWKI-85b50517-fdea-3aa6-abbd-dd506393aaa5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Mean Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 75
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3c8f8896-6dea-4451-a11f-3c965363955c.json b/test/data/enm/study-NWKI-3c8f8896-6dea-4451-a11f-3c965363955c.json
deleted file mode 100644
index bfff265..0000000
--- a/test/data/enm/study-NWKI-3c8f8896-6dea-4451-a11f-3c965363955c.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-3c8f8896-6dea-4451-a11f-3c965363955c",
- "owner": {
- "substance": {
- "uuid": "NWKI-61c73e33-28ab-3387-8cdf-cb7c135fb06c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 18.3,
- "errorValue": 6.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3d0e9cd5-4ad6-4505-a94c-5ef922462050.json b/test/data/enm/study-NWKI-3d0e9cd5-4ad6-4505-a94c-5ef922462050.json
deleted file mode 100644
index e68b88d..0000000
--- a/test/data/enm/study-NWKI-3d0e9cd5-4ad6-4505-a94c-5ef922462050.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-3d0e9cd5-4ad6-4505-a94c-5ef922462050",
- "owner": {
- "substance": {
- "uuid": "NWKI-bc434442-e632-3829-be8d-64df1c9b70d3"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1063/1.2061873",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3d3bad37-27f6-4d18-bc7a-fc2a6010717f.json b/test/data/enm/study-NWKI-3d3bad37-27f6-4d18-bc7a-fc2a6010717f.json
deleted file mode 100644
index be4aa8a..0000000
--- a/test/data/enm/study-NWKI-3d3bad37-27f6-4d18-bc7a-fc2a6010717f.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-3d3bad37-27f6-4d18-bc7a-fc2a6010717f",
- "owner": {
- "substance": {
- "uuid": "NWKI-f3be029d-68f6-310a-87a4-ceffee1b4eda"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 160
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3d42e721-069b-435e-8bcc-7198efc7225e.json b/test/data/enm/study-NWKI-3d42e721-069b-435e-8bcc-7198efc7225e.json
deleted file mode 100644
index fc1727c..0000000
--- a/test/data/enm/study-NWKI-3d42e721-069b-435e-8bcc-7198efc7225e.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-3d42e721-069b-435e-8bcc-7198efc7225e",
- "owner": {
- "substance": {
- "uuid": "NWKI-0d776d00-aec4-3a75-9eb3-453909fc50ed"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -9.23
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3e4eb704-bc7a-4867-af2f-58c5bc77d35f.json b/test/data/enm/study-NWKI-3e4eb704-bc7a-4867-af2f-58c5bc77d35f.json
deleted file mode 100644
index 7e2f87f..0000000
--- a/test/data/enm/study-NWKI-3e4eb704-bc7a-4867-af2f-58c5bc77d35f.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-3e4eb704-bc7a-4867-af2f-58c5bc77d35f",
- "owner": {
- "substance": {
- "uuid": "NWKI-ee237892-6184-3016-92af-b41dc14e9f9b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DNH2"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3e6e8d72-8f5a-4d0e-b223-bafe14c1fc5f.json b/test/data/enm/study-NWKI-3e6e8d72-8f5a-4d0e-b223-bafe14c1fc5f.json
deleted file mode 100644
index b88829c..0000000
--- a/test/data/enm/study-NWKI-3e6e8d72-8f5a-4d0e-b223-bafe14c1fc5f.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-3e6e8d72-8f5a-4d0e-b223-bafe14c1fc5f",
- "owner": {
- "substance": {
- "uuid": "NWKI-438d1468-d5d7-3977-9dab-15a3a05add38"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "BET",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 600
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3ea8081e-a695-4448-b20b-8db60debf249.json b/test/data/enm/study-NWKI-3ea8081e-a695-4448-b20b-8db60debf249.json
deleted file mode 100644
index 9f3d8cf..0000000
--- a/test/data/enm/study-NWKI-3ea8081e-a695-4448-b20b-8db60debf249.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-3ea8081e-a695-4448-b20b-8db60debf249",
- "owner": {
- "substance": {
- "uuid": "NWKI-c7bee4e3-8884-3e29-ad8b-38decf6146fd"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "FITC-2DCOOH"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "FITC"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "FITC"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3efec963-1abc-49bb-b008-5d665f7d2bf6.json b/test/data/enm/study-NWKI-3efec963-1abc-49bb-b008-5d665f7d2bf6.json
deleted file mode 100644
index a96b4fa..0000000
--- a/test/data/enm/study-NWKI-3efec963-1abc-49bb-b008-5d665f7d2bf6.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-3efec963-1abc-49bb-b008-5d665f7d2bf6",
- "owner": {
- "substance": {
- "uuid": "NWKI-ad1d5068-29cd-3d8c-9ed0-44ed4ce06ddd"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 36
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3f4dfa1e-e8c4-43db-b079-7769a06576ee.json b/test/data/enm/study-NWKI-3f4dfa1e-e8c4-43db-b079-7769a06576ee.json
deleted file mode 100644
index 9a81fe1..0000000
--- a/test/data/enm/study-NWKI-3f4dfa1e-e8c4-43db-b079-7769a06576ee.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "NWKI-3f4dfa1e-e8c4-43db-b079-7769a06576ee",
- "owner": {
- "substance": {
- "uuid": "NWKI-ede00e9f-201f-33c9-9191-8dbf67fcf1b1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "COOH-2DAmphPolymer"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "COOH"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "O=CO[H]"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "COOH"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3f8b35b3-2871-4ba1-9cac-0bff533fc0ac.json b/test/data/enm/study-NWKI-3f8b35b3-2871-4ba1-9cac-0bff533fc0ac.json
deleted file mode 100644
index ef4d8d8..0000000
--- a/test/data/enm/study-NWKI-3f8b35b3-2871-4ba1-9cac-0bff533fc0ac.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-3f8b35b3-2871-4ba1-9cac-0bff533fc0ac",
- "owner": {
- "substance": {
- "uuid": "NWKI-57943982-0642-388c-be22-f1770d3b620c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 10
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-3fc5844e-758a-4723-9853-26c51789b4c5.json b/test/data/enm/study-NWKI-3fc5844e-758a-4723-9853-26c51789b4c5.json
deleted file mode 100644
index 1819c05..0000000
--- a/test/data/enm/study-NWKI-3fc5844e-758a-4723-9853-26c51789b4c5.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-3fc5844e-758a-4723-9853-26c51789b4c5",
- "owner": {
- "substance": {
- "uuid": "NWKI-86b21444-5403-3e29-b117-e09ef92cca2a"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 707
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-40485c29-c870-40f6-a634-682e2601a2d1.json b/test/data/enm/study-NWKI-40485c29-c870-40f6-a634-682e2601a2d1.json
deleted file mode 100644
index 727210e..0000000
--- a/test/data/enm/study-NWKI-40485c29-c870-40f6-a634-682e2601a2d1.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-40485c29-c870-40f6-a634-682e2601a2d1",
- "owner": {
- "substance": {
- "uuid": "NWKI-e373781b-461e-35dd-ae27-4169b7d743af"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -9.22
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-405149ad-184c-4263-996f-1df90ef019b9.json b/test/data/enm/study-NWKI-405149ad-184c-4263-996f-1df90ef019b9.json
deleted file mode 100644
index 4ccc09b..0000000
--- a/test/data/enm/study-NWKI-405149ad-184c-4263-996f-1df90ef019b9.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-405149ad-184c-4263-996f-1df90ef019b9",
- "owner": {
- "substance": {
- "uuid": "NWKI-6e6a5fec-23c2-3fff-8522-a22689091196"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loQualifier": ">=",
- "loValue": 590,
- "upQualifier": "<=",
- "upValue": 690
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-407a0c47-e0aa-4f22-812b-f34f49f0fb2f.json b/test/data/enm/study-NWKI-407a0c47-e0aa-4f22-812b-f34f49f0fb2f.json
deleted file mode 100644
index 6c29429..0000000
--- a/test/data/enm/study-NWKI-407a0c47-e0aa-4f22-812b-f34f49f0fb2f.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-407a0c47-e0aa-4f22-812b-f34f49f0fb2f",
- "owner": {
- "substance": {
- "uuid": "NWKI-845bf8fc-788d-38f2-be58-030f27c0d337"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4171cf30-7412-4059-80ce-8f79a45445b6.json b/test/data/enm/study-NWKI-4171cf30-7412-4059-80ce-8f79a45445b6.json
deleted file mode 100644
index 19ebc74..0000000
--- a/test/data/enm/study-NWKI-4171cf30-7412-4059-80ce-8f79a45445b6.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-4171cf30-7412-4059-80ce-8f79a45445b6",
- "owner": {
- "substance": {
- "uuid": "NWKI-812e122b-8bee-350d-8aea-aaaa88ce84dd"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-42360b08-f8be-49c6-98e6-bb8616f090b5.json b/test/data/enm/study-NWKI-42360b08-f8be-49c6-98e6-bb8616f090b5.json
deleted file mode 100644
index b1b9810..0000000
--- a/test/data/enm/study-NWKI-42360b08-f8be-49c6-98e6-bb8616f090b5.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-42360b08-f8be-49c6-98e6-bb8616f090b5",
- "owner": {
- "substance": {
- "uuid": "NWKI-4b4cb369-8202-3483-9220-553e433c9159"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": 3.24
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-424e79ab-f8be-4bad-8c1e-2abf76cdcdd7.json b/test/data/enm/study-NWKI-424e79ab-f8be-4bad-8c1e-2abf76cdcdd7.json
deleted file mode 100644
index ac92c1c..0000000
--- a/test/data/enm/study-NWKI-424e79ab-f8be-4bad-8c1e-2abf76cdcdd7.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-424e79ab-f8be-4bad-8c1e-2abf76cdcdd7",
- "owner": {
- "substance": {
- "uuid": "NWKI-743f46ab-ca20-3f60-a14f-1695430eae68"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.envpol.2008.11.004",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 532
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-42778862-5e5d-49a8-98e2-bdc3c9e3ab2a.json b/test/data/enm/study-NWKI-42778862-5e5d-49a8-98e2-bdc3c9e3ab2a.json
deleted file mode 100644
index 508db8d..0000000
--- a/test/data/enm/study-NWKI-42778862-5e5d-49a8-98e2-bdc3c9e3ab2a.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-42778862-5e5d-49a8-98e2-bdc3c9e3ab2a",
- "owner": {
- "substance": {
- "uuid": "NWKI-9a0a7a86-fd00-3835-9795-a4da7d9d1544"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 24
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-42951d23-9941-41f1-b599-8adfde19b8aa.json b/test/data/enm/study-NWKI-42951d23-9941-41f1-b599-8adfde19b8aa.json
deleted file mode 100644
index 01e0b88..0000000
--- a/test/data/enm/study-NWKI-42951d23-9941-41f1-b599-8adfde19b8aa.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-42951d23-9941-41f1-b599-8adfde19b8aa",
- "owner": {
- "substance": {
- "uuid": "NWKI-4b4cb369-8202-3483-9220-553e433c9159"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DCY35"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-42eae623-28f5-4ee5-9698-2669c8328041.json b/test/data/enm/study-NWKI-42eae623-28f5-4ee5-9698-2669c8328041.json
deleted file mode 100644
index 9ef0fa0..0000000
--- a/test/data/enm/study-NWKI-42eae623-28f5-4ee5-9698-2669c8328041.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-42eae623-28f5-4ee5-9698-2669c8328041",
- "owner": {
- "substance": {
- "uuid": "NWKI-17c74ed1-b289-3ca1-8477-390a588cb28c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DPEG"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PVA"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-42eeeb5b-e44c-4039-884d-367249af0038.json b/test/data/enm/study-NWKI-42eeeb5b-e44c-4039-884d-367249af0038.json
deleted file mode 100644
index 92f4a62..0000000
--- a/test/data/enm/study-NWKI-42eeeb5b-e44c-4039-884d-367249af0038.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-42eeeb5b-e44c-4039-884d-367249af0038",
- "owner": {
- "substance": {
- "uuid": "NWKI-ff480524-2eb0-39e2-a449-47c026f09eb9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 185,
- "errorValue": 12
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4453c171-34c1-400e-96e5-f213258eb9a0.json b/test/data/enm/study-NWKI-4453c171-34c1-400e-96e5-f213258eb9a0.json
deleted file mode 100644
index 48b572a..0000000
--- a/test/data/enm/study-NWKI-4453c171-34c1-400e-96e5-f213258eb9a0.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-4453c171-34c1-400e-96e5-f213258eb9a0",
- "owner": {
- "substance": {
- "uuid": "NWKI-ca37d03d-af78-3982-8ca0-76025e71fcf1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 15,
- "upQualifier": "<=",
- "upValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-44812f4a-7893-4211-b5d4-d1c61cd9e334.json b/test/data/enm/study-NWKI-44812f4a-7893-4211-b5d4-d1c61cd9e334.json
deleted file mode 100644
index 9ddff1e..0000000
--- a/test/data/enm/study-NWKI-44812f4a-7893-4211-b5d4-d1c61cd9e334.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-44812f4a-7893-4211-b5d4-d1c61cd9e334",
- "owner": {
- "substance": {
- "uuid": "NWKI-b110d018-6de0-303b-afcc-6a5e1f5911aa"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "Shape",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Anatase"
- },
- "effects": [
- {
- "endpoint": "SHAPE",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": null,
- "textValue": "Anatase"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-449dbb75-83c8-4f54-8208-3b0f7093ddc5.json b/test/data/enm/study-NWKI-449dbb75-83c8-4f54-8208-3b0f7093ddc5.json
deleted file mode 100644
index 7906c35..0000000
--- a/test/data/enm/study-NWKI-449dbb75-83c8-4f54-8208-3b0f7093ddc5.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "uuid": "NWKI-449dbb75-83c8-4f54-8208-3b0f7093ddc5",
- "owner": {
- "substance": {
- "uuid": "NWKI-fe8fe744-ea1f-3841-9a6d-f81be44651a8"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Ag"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Ag"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "TMATCoating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "TMAT"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "SCC[N+](C)(C)C.[I-]"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "TMAT"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-45484e90-4453-4b65-a581-2b81994d5d96.json b/test/data/enm/study-NWKI-45484e90-4453-4b65-a581-2b81994d5d96.json
deleted file mode 100644
index 0cb17f5..0000000
--- a/test/data/enm/study-NWKI-45484e90-4453-4b65-a581-2b81994d5d96.json
+++ /dev/null
@@ -1,65 +0,0 @@
-{
- "uuid": "NWKI-45484e90-4453-4b65-a581-2b81994d5d96",
- "owner": {
- "substance": {
- "uuid": "NWKI-144a9226-4b93-36a9-ba2d-6b6c4903357b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "Serum": {
- "loValue": "sfMEM"
- },
- "pH": {
- "loValue": 8.12
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -30
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-45a2a522-fd42-4b13-a51c-c2ae30d8e4e8.json b/test/data/enm/study-NWKI-45a2a522-fd42-4b13-a51c-c2ae30d8e4e8.json
deleted file mode 100644
index 3ed2d9b..0000000
--- a/test/data/enm/study-NWKI-45a2a522-fd42-4b13-a51c-c2ae30d8e4e8.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-45a2a522-fd42-4b13-a51c-c2ae30d8e4e8",
- "owner": {
- "substance": {
- "uuid": "NWKI-c05becdf-4b9b-3599-9922-89235b2e10da"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 25
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-46021e41-3e84-406a-a9db-36bdaa480006.json b/test/data/enm/study-NWKI-46021e41-3e84-406a-a9db-36bdaa480006.json
deleted file mode 100644
index c3b0511..0000000
--- a/test/data/enm/study-NWKI-46021e41-3e84-406a-a9db-36bdaa480006.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-46021e41-3e84-406a-a9db-36bdaa480006",
- "owner": {
- "substance": {
- "uuid": "NWKI-ad44f58f-8080-3017-9f8d-485fad044849"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -3.61
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-46590639-f0b8-45ae-ae2f-610b8a912cc4.json b/test/data/enm/study-NWKI-46590639-f0b8-45ae-ae2f-610b8a912cc4.json
deleted file mode 100644
index 512480d..0000000
--- a/test/data/enm/study-NWKI-46590639-f0b8-45ae-ae2f-610b8a912cc4.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-46590639-f0b8-45ae-ae2f-610b8a912cc4",
- "owner": {
- "substance": {
- "uuid": "NWKI-2390517f-b763-3850-b1b4-6e50fee63829"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 15,
- "upQualifier": "<=",
- "upValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-46a0c2a5-0e02-4eb7-93fb-e15a56feea9e.json b/test/data/enm/study-NWKI-46a0c2a5-0e02-4eb7-93fb-e15a56feea9e.json
deleted file mode 100644
index fc35c97..0000000
--- a/test/data/enm/study-NWKI-46a0c2a5-0e02-4eb7-93fb-e15a56feea9e.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-46a0c2a5-0e02-4eb7-93fb-e15a56feea9e",
- "owner": {
- "substance": {
- "uuid": "NWKI-70e8dac6-42a3-36ed-8fa3-19ffbc3bb69f"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "BET",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 50
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4715a11f-9c3a-4a02-b0f4-d5e05baf2e46.json b/test/data/enm/study-NWKI-4715a11f-9c3a-4a02-b0f4-d5e05baf2e46.json
deleted file mode 100644
index d27c3da..0000000
--- a/test/data/enm/study-NWKI-4715a11f-9c3a-4a02-b0f4-d5e05baf2e46.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-4715a11f-9c3a-4a02-b0f4-d5e05baf2e46",
- "owner": {
- "substance": {
- "uuid": "NWKI-d0a80e1b-1b7f-35c7-9185-244ccc2c04c2"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 9.7,
- "errorValue": 0.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4716f798-2c74-459d-90ca-dddaf4d0ef9f.json b/test/data/enm/study-NWKI-4716f798-2c74-459d-90ca-dddaf4d0ef9f.json
deleted file mode 100644
index 9c8c6bd..0000000
--- a/test/data/enm/study-NWKI-4716f798-2c74-459d-90ca-dddaf4d0ef9f.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-4716f798-2c74-459d-90ca-dddaf4d0ef9f",
- "owner": {
- "substance": {
- "uuid": "NWKI-ad44f58f-8080-3017-9f8d-485fad044849"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DRhodamine-2DProtamine"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-474fcad3-d31e-434a-92dc-2c1d94802498.json b/test/data/enm/study-NWKI-474fcad3-d31e-434a-92dc-2c1d94802498.json
deleted file mode 100644
index 641316d..0000000
--- a/test/data/enm/study-NWKI-474fcad3-d31e-434a-92dc-2c1d94802498.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-474fcad3-d31e-434a-92dc-2c1d94802498",
- "owner": {
- "substance": {
- "uuid": "NWKI-438d1468-d5d7-3977-9dab-15a3a05add38"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002167_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002167",
- "title": "BAO_0002167 Genotoxicity Assay"
- },
- "endpoint": "DNA in Tail",
- "guideline": [
- "Fpg-2Dmodified Comet Assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Fpg-2Dmodified Comet Assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "DNA_in_Tail",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- },
- "FPG Content": {
- "loValue": 100
- }
- },
- "result": {
- "unit": "%",
- "loValue": 4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-477db1fa-3728-4edb-8502-7c144290d2b9.json b/test/data/enm/study-NWKI-477db1fa-3728-4edb-8502-7c144290d2b9.json
deleted file mode 100644
index 3078767..0000000
--- a/test/data/enm/study-NWKI-477db1fa-3728-4edb-8502-7c144290d2b9.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-477db1fa-3728-4edb-8502-7c144290d2b9",
- "owner": {
- "substance": {
- "uuid": "NWKI-5e5ed57f-33d3-39bb-9511-3604a0babf5e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn2021056",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -34.9
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-480620bc-921d-48cc-9c5b-12b3e6e10cfe.json b/test/data/enm/study-NWKI-480620bc-921d-48cc-9c5b-12b3e6e10cfe.json
deleted file mode 100644
index a3a6671..0000000
--- a/test/data/enm/study-NWKI-480620bc-921d-48cc-9c5b-12b3e6e10cfe.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-480620bc-921d-48cc-9c5b-12b3e6e10cfe",
- "owner": {
- "substance": {
- "uuid": "NWKI-4b4cb369-8202-3483-9220-553e433c9159"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DCY35"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cy3.5"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cy3.5"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-485bdc76-7caf-417b-9d38-a4922bbf19fc.json b/test/data/enm/study-NWKI-485bdc76-7caf-417b-9d38-a4922bbf19fc.json
deleted file mode 100644
index 8b6d865..0000000
--- a/test/data/enm/study-NWKI-485bdc76-7caf-417b-9d38-a4922bbf19fc.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-485bdc76-7caf-417b-9d38-a4922bbf19fc",
- "owner": {
- "substance": {
- "uuid": "NWKI-e373781b-461e-35dd-ae27-4169b7d743af"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 30
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-494d44b2-073a-4136-b394-0efd79375df2.json b/test/data/enm/study-NWKI-494d44b2-073a-4136-b394-0efd79375df2.json
deleted file mode 100644
index b0a68cf..0000000
--- a/test/data/enm/study-NWKI-494d44b2-073a-4136-b394-0efd79375df2.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-494d44b2-073a-4136-b394-0efd79375df2",
- "owner": {
- "substance": {
- "uuid": "NWKI-6392b929-1b64-34ce-90c6-162b99ce3992"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 14.7,
- "errorValue": 5.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-497f175a-9524-4d84-91bc-041d0423e724.json b/test/data/enm/study-NWKI-497f175a-9524-4d84-91bc-041d0423e724.json
deleted file mode 100644
index b05d0f7..0000000
--- a/test/data/enm/study-NWKI-497f175a-9524-4d84-91bc-041d0423e724.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-497f175a-9524-4d84-91bc-041d0423e724",
- "owner": {
- "substance": {
- "uuid": "NWKI-70e8dac6-42a3-36ed-8fa3-19ffbc3bb69f"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-49be8b3f-29c1-42d7-ac5f-ab75e8f2f5a2.json b/test/data/enm/study-NWKI-49be8b3f-29c1-42d7-ac5f-ab75e8f2f5a2.json
deleted file mode 100644
index 3183f8c..0000000
--- a/test/data/enm/study-NWKI-49be8b3f-29c1-42d7-ac5f-ab75e8f2f5a2.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-49be8b3f-29c1-42d7-ac5f-ab75e8f2f5a2",
- "owner": {
- "substance": {
- "uuid": "NWKI-8f7f774c-d727-33a9-adc6-9068524faf1c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -11.9
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-49ccb387-6de9-4ff5-b90f-7d40e9d964ca.json b/test/data/enm/study-NWKI-49ccb387-6de9-4ff5-b90f-7d40e9d964ca.json
deleted file mode 100644
index 6308f56..0000000
--- a/test/data/enm/study-NWKI-49ccb387-6de9-4ff5-b90f-7d40e9d964ca.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-49ccb387-6de9-4ff5-b90f-7d40e9d964ca",
- "owner": {
- "substance": {
- "uuid": "NWKI-3bbccc84-019f-369f-ba70-490fcfde4423"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 15,
- "upQualifier": "<=",
- "upValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4a9f81e2-c857-4ca4-820d-95d026a2b83b.json b/test/data/enm/study-NWKI-4a9f81e2-c857-4ca4-820d-95d026a2b83b.json
deleted file mode 100644
index 47f2cca..0000000
--- a/test/data/enm/study-NWKI-4a9f81e2-c857-4ca4-820d-95d026a2b83b.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-4a9f81e2-c857-4ca4-820d-95d026a2b83b",
- "owner": {
- "substance": {
- "uuid": "NWKI-56d49cc3-4a76-354b-9a77-4b2ecb2dbef0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002167_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002167",
- "title": "BAO_0002167 Genotoxicity Assay"
- },
- "endpoint": "DNA in Tail",
- "guideline": [
- "Fpg-2Dmodified Comet Assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Fpg-2Dmodified Comet Assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "DNA_in_Tail",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "μg/cm^2"
- },
- "FPG Content": {
- "loValue": 0
- }
- },
- "result": {
- "unit": "%",
- "loValue": 16
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4ac12800-e71c-437a-b839-fdccb5d18d69.json b/test/data/enm/study-NWKI-4ac12800-e71c-437a-b839-fdccb5d18d69.json
deleted file mode 100644
index 0008303..0000000
--- a/test/data/enm/study-NWKI-4ac12800-e71c-437a-b839-fdccb5d18d69.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-4ac12800-e71c-437a-b839-fdccb5d18d69",
- "owner": {
- "substance": {
- "uuid": "NWKI-77fb742b-c676-3ad7-bd19-6d5ec1df62ad"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -7.57
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4acc3309-36a7-4ddf-8a38-458856cd36d6.json b/test/data/enm/study-NWKI-4acc3309-36a7-4ddf-8a38-458856cd36d6.json
deleted file mode 100644
index 808cf9c..0000000
--- a/test/data/enm/study-NWKI-4acc3309-36a7-4ddf-8a38-458856cd36d6.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-4acc3309-36a7-4ddf-8a38-458856cd36d6",
- "owner": {
- "substance": {
- "uuid": "NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 0.75,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4ad357a1-06bf-497a-8ae0-8a39796b6e1b.json b/test/data/enm/study-NWKI-4ad357a1-06bf-497a-8ae0-8a39796b6e1b.json
deleted file mode 100644
index ecab7be..0000000
--- a/test/data/enm/study-NWKI-4ad357a1-06bf-497a-8ae0-8a39796b6e1b.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-4ad357a1-06bf-497a-8ae0-8a39796b6e1b",
- "owner": {
- "substance": {
- "uuid": "NWKI-ae67096a-fca6-3afc-bade-c362e3eeadc8"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn202116p",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -15.1,
- "errorValue": 2.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4b147634-318e-478b-91fd-be570e516905.json b/test/data/enm/study-NWKI-4b147634-318e-478b-91fd-be570e516905.json
deleted file mode 100644
index b52d341..0000000
--- a/test/data/enm/study-NWKI-4b147634-318e-478b-91fd-be570e516905.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-4b147634-318e-478b-91fd-be570e516905",
- "owner": {
- "substance": {
- "uuid": "NWKI-f40bfb8a-1280-35a2-866c-42b5a3ce13e7"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.64
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4b60773a-f65a-438f-8299-286082243561.json b/test/data/enm/study-NWKI-4b60773a-f65a-438f-8299-286082243561.json
deleted file mode 100644
index b597119..0000000
--- a/test/data/enm/study-NWKI-4b60773a-f65a-438f-8299-286082243561.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-4b60773a-f65a-438f-8299-286082243561",
- "owner": {
- "substance": {
- "uuid": "NWKI-905e44ef-3f7f-314d-add0-3e00439eaded"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 3.45
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4b72cf25-f21a-4add-a046-55ffa1030d9a.json b/test/data/enm/study-NWKI-4b72cf25-f21a-4add-a046-55ffa1030d9a.json
deleted file mode 100644
index 9ff1a22..0000000
--- a/test/data/enm/study-NWKI-4b72cf25-f21a-4add-a046-55ffa1030d9a.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-4b72cf25-f21a-4add-a046-55ffa1030d9a",
- "owner": {
- "substance": {
- "uuid": "NWKI-895a506b-c331-3576-bf9e-cbcde5822c11"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null,
- "Serum": {
- "loValue": "PBS"
- }
- },
- "result": {
- "unit": "nm",
- "loValue": 73
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4b8cbc90-8984-4fa7-8e0d-24205b96917b.json b/test/data/enm/study-NWKI-4b8cbc90-8984-4fa7-8e0d-24205b96917b.json
deleted file mode 100644
index e2610b4..0000000
--- a/test/data/enm/study-NWKI-4b8cbc90-8984-4fa7-8e0d-24205b96917b.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-4b8cbc90-8984-4fa7-8e0d-24205b96917b",
- "owner": {
- "substance": {
- "uuid": "NWKI-0866f605-4cfb-32a2-a704-2cf2a8d3d9a6"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 15,
- "upQualifier": "<=",
- "upValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4bb154cc-48e2-4286-bdb0-dd65cfff3bc3.json b/test/data/enm/study-NWKI-4bb154cc-48e2-4286-bdb0-dd65cfff3bc3.json
deleted file mode 100644
index 32505bc..0000000
--- a/test/data/enm/study-NWKI-4bb154cc-48e2-4286-bdb0-dd65cfff3bc3.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-4bb154cc-48e2-4286-bdb0-dd65cfff3bc3",
- "owner": {
- "substance": {
- "uuid": "NWKI-4f1a3729-4a88-31bc-abca-7eb6503a73d4"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 220
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4bd8fefc-f691-4008-a426-c96ca2fda917.json b/test/data/enm/study-NWKI-4bd8fefc-f691-4008-a426-c96ca2fda917.json
deleted file mode 100644
index 9ea9830..0000000
--- a/test/data/enm/study-NWKI-4bd8fefc-f691-4008-a426-c96ca2fda917.json
+++ /dev/null
@@ -1,55 +0,0 @@
-{
- "uuid": "NWKI-4bd8fefc-f691-4008-a426-c96ca2fda917",
- "owner": {
- "substance": {
- "uuid": "NWKI-ea48c37d-840a-30d2-9740-1198a7e2c3b6"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_MELTING_SECTION",
- "term": "http://semanticscience.org/resource/CHEMINF_000256",
- "title": "4.2 Melting point / freezing point"
- },
- "endpoint": "Melting Point",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Melting Point",
- "conditions": {
- "Decomposition": null,
- "Sublimation": null
- },
- "result": {
- "unit": "Celsius",
- "loQualifier": ">=",
- "loValue": 1600
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4bf35dc7-46c6-4803-95b7-96044af583bb.json b/test/data/enm/study-NWKI-4bf35dc7-46c6-4803-95b7-96044af583bb.json
deleted file mode 100644
index fb484af..0000000
--- a/test/data/enm/study-NWKI-4bf35dc7-46c6-4803-95b7-96044af583bb.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-4bf35dc7-46c6-4803-95b7-96044af583bb",
- "owner": {
- "substance": {
- "uuid": "NWKI-02981dd4-b7d0-34c8-a0ab-dd19a5a40865"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4bf8eec4-5811-473c-bb0a-0ef7d57278fc.json b/test/data/enm/study-NWKI-4bf8eec4-5811-473c-bb0a-0ef7d57278fc.json
deleted file mode 100644
index d1f90b4..0000000
--- a/test/data/enm/study-NWKI-4bf8eec4-5811-473c-bb0a-0ef7d57278fc.json
+++ /dev/null
@@ -1,65 +0,0 @@
-{
- "uuid": "NWKI-4bf8eec4-5811-473c-bb0a-0ef7d57278fc",
- "owner": {
- "substance": {
- "uuid": "NWKI-4358aa69-dec1-387a-b7ea-2238198ccdff"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "Serum": {
- "loValue": "PBS"
- },
- "pH": {
- "loValue": 7.54
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -42
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4d004bc3-aed2-42c3-9973-2fbd846c917f.json b/test/data/enm/study-NWKI-4d004bc3-aed2-42c3-9973-2fbd846c917f.json
deleted file mode 100644
index 6576d3a..0000000
--- a/test/data/enm/study-NWKI-4d004bc3-aed2-42c3-9973-2fbd846c917f.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-4d004bc3-aed2-42c3-9973-2fbd846c917f",
- "owner": {
- "substance": {
- "uuid": "NWKI-b6c86895-1b73-39ec-8bd2-0106e77a7673"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DAF488"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "AlexaFluor488"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "AlexaFluor488"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4d3b2e50-6bd6-4ebb-b8d3-ae42c20aa399.json b/test/data/enm/study-NWKI-4d3b2e50-6bd6-4ebb-b8d3-ae42c20aa399.json
deleted file mode 100644
index 38731d0..0000000
--- a/test/data/enm/study-NWKI-4d3b2e50-6bd6-4ebb-b8d3-ae42c20aa399.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-4d3b2e50-6bd6-4ebb-b8d3-ae42c20aa399",
- "owner": {
- "substance": {
- "uuid": "NWKI-0bb16a46-44a8-353e-ba07-b5835e323537"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 2900,
- "errorValue": 1100
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4d9128fa-262f-418c-abc4-358f5d190e64.json b/test/data/enm/study-NWKI-4d9128fa-262f-418c-abc4-358f5d190e64.json
deleted file mode 100644
index 95d4cf8..0000000
--- a/test/data/enm/study-NWKI-4d9128fa-262f-418c-abc4-358f5d190e64.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-4d9128fa-262f-418c-abc4-358f5d190e64",
- "owner": {
- "substance": {
- "uuid": "NWKI-c0927a67-d21d-37e8-932d-fb1607e58aee"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "LDH Release",
- "guideline": [
- "Lactate Dehydrogenase Activity"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Lactate Dehydrogenase Activity"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "LDH_Release",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 80,
- "unit": "ug/cm^2"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 42
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4ed9f2c7-b2a3-44b9-ac42-cccc38e89ac8.json b/test/data/enm/study-NWKI-4ed9f2c7-b2a3-44b9-ac42-cccc38e89ac8.json
deleted file mode 100644
index 656e8d5..0000000
--- a/test/data/enm/study-NWKI-4ed9f2c7-b2a3-44b9-ac42-cccc38e89ac8.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-4ed9f2c7-b2a3-44b9-ac42-cccc38e89ac8",
- "owner": {
- "substance": {
- "uuid": "NWKI-c35f0f16-4616-3ec6-a142-4d274add68a2"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 43.8,
- "errorValue": 15.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4f1aee45-76f4-4e13-9498-f3ad8a6c0883.json b/test/data/enm/study-NWKI-4f1aee45-76f4-4e13-9498-f3ad8a6c0883.json
deleted file mode 100644
index 3689e65..0000000
--- a/test/data/enm/study-NWKI-4f1aee45-76f4-4e13-9498-f3ad8a6c0883.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-4f1aee45-76f4-4e13-9498-f3ad8a6c0883",
- "owner": {
- "substance": {
- "uuid": "NWKI-f4579554-a7fc-3e3f-991a-3b016207fa06"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390.2011.587903",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 12
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-4fac17a1-7915-4937-a74c-180f2ca61e5f.json b/test/data/enm/study-NWKI-4fac17a1-7915-4937-a74c-180f2ca61e5f.json
deleted file mode 100644
index 8252417..0000000
--- a/test/data/enm/study-NWKI-4fac17a1-7915-4937-a74c-180f2ca61e5f.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-4fac17a1-7915-4937-a74c-180f2ca61e5f",
- "owner": {
- "substance": {
- "uuid": "NWKI-4e021275-ae4e-3d24-bdb8-40c6d8d9d6fc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Isoelectric Point",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ISOELECTRIC POINT",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": 7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-50291d37-1850-4345-8632-4f912b91c7c0.json b/test/data/enm/study-NWKI-50291d37-1850-4345-8632-4f912b91c7c0.json
deleted file mode 100644
index f56c13c..0000000
--- a/test/data/enm/study-NWKI-50291d37-1850-4345-8632-4f912b91c7c0.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-50291d37-1850-4345-8632-4f912b91c7c0",
- "owner": {
- "substance": {
- "uuid": "NWKI-e4dab3d9-2699-3a0b-9e9c-f257088142cc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 3.12,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-50af5cfe-a337-4bff-b3a6-9d4048072b16.json b/test/data/enm/study-NWKI-50af5cfe-a337-4bff-b3a6-9d4048072b16.json
deleted file mode 100644
index 922d316..0000000
--- a/test/data/enm/study-NWKI-50af5cfe-a337-4bff-b3a6-9d4048072b16.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-50af5cfe-a337-4bff-b3a6-9d4048072b16",
- "owner": {
- "substance": {
- "uuid": "NWKI-67b71fb2-85c1-3130-bd4e-84da8bc05fc9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 10,
- "upQualifier": "<=",
- "upValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-50d0445d-2ddf-48f0-97a5-f879b4b71de6.json b/test/data/enm/study-NWKI-50d0445d-2ddf-48f0-97a5-f879b4b71de6.json
deleted file mode 100644
index 658fde4..0000000
--- a/test/data/enm/study-NWKI-50d0445d-2ddf-48f0-97a5-f879b4b71de6.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "NWKI-50d0445d-2ddf-48f0-97a5-f879b4b71de6",
- "owner": {
- "substance": {
- "uuid": "NWKI-bb304faf-e44e-3103-b2a6-01b99c1c23de"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": -50,
- "upQualifier": "<=",
- "upValue": 38
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-50d10201-2928-49a1-82e9-decaf8df67fd.json b/test/data/enm/study-NWKI-50d10201-2928-49a1-82e9-decaf8df67fd.json
deleted file mode 100644
index 198ca77..0000000
--- a/test/data/enm/study-NWKI-50d10201-2928-49a1-82e9-decaf8df67fd.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-50d10201-2928-49a1-82e9-decaf8df67fd",
- "owner": {
- "substance": {
- "uuid": "NWKI-b14e37d1-8dbb-36d7-925c-4093c91a0e92"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 100,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-50db9231-07eb-4856-8521-05b59b840557.json b/test/data/enm/study-NWKI-50db9231-07eb-4856-8521-05b59b840557.json
deleted file mode 100644
index 9f07516..0000000
--- a/test/data/enm/study-NWKI-50db9231-07eb-4856-8521-05b59b840557.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-50db9231-07eb-4856-8521-05b59b840557",
- "owner": {
- "substance": {
- "uuid": "NWKI-de03994b-9d74-3e39-aa41-e7df34384442"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 5,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-50e51401-4fb9-4f7b-b958-ebe38f0d9a21.json b/test/data/enm/study-NWKI-50e51401-4fb9-4f7b-b958-ebe38f0d9a21.json
deleted file mode 100644
index 8863843..0000000
--- a/test/data/enm/study-NWKI-50e51401-4fb9-4f7b-b958-ebe38f0d9a21.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-50e51401-4fb9-4f7b-b958-ebe38f0d9a21",
- "owner": {
- "substance": {
- "uuid": "NWKI-6b1b44fa-70c1-3034-9c4b-7efb334762e0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 61
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-522b7192-5e42-46b5-91e4-7af1ad67f9f8.json b/test/data/enm/study-NWKI-522b7192-5e42-46b5-91e4-7af1ad67f9f8.json
deleted file mode 100644
index 7fabee9..0000000
--- a/test/data/enm/study-NWKI-522b7192-5e42-46b5-91e4-7af1ad67f9f8.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-522b7192-5e42-46b5-91e4-7af1ad67f9f8",
- "owner": {
- "substance": {
- "uuid": "NWKI-823e6217-d5b0-3c61-b886-768cfe726d38"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 6.3,
- "errorValue": 0.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-523df19a-2a87-409b-86ae-3e3b39945909.json b/test/data/enm/study-NWKI-523df19a-2a87-409b-86ae-3e3b39945909.json
deleted file mode 100644
index 18f62ec..0000000
--- a/test/data/enm/study-NWKI-523df19a-2a87-409b-86ae-3e3b39945909.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-523df19a-2a87-409b-86ae-3e3b39945909",
- "owner": {
- "substance": {
- "uuid": "NWKI-cfea3b7c-ee39-34ef-8349-16b1e7825861"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 20,
- "upQualifier": "<=",
- "upValue": 60
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-524de060-5f0a-498c-9a47-e2bc418e3977.json b/test/data/enm/study-NWKI-524de060-5f0a-498c-9a47-e2bc418e3977.json
deleted file mode 100644
index 34adc8b..0000000
--- a/test/data/enm/study-NWKI-524de060-5f0a-498c-9a47-e2bc418e3977.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-524de060-5f0a-498c-9a47-e2bc418e3977",
- "owner": {
- "substance": {
- "uuid": "NWKI-0d6f156a-6ce8-3bac-97e3-b5d62ded7f4e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn200546k",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 0.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-5295d5ce-3714-411e-b225-0c769a170e59.json b/test/data/enm/study-NWKI-5295d5ce-3714-411e-b225-0c769a170e59.json
deleted file mode 100644
index e9e5c7a..0000000
--- a/test/data/enm/study-NWKI-5295d5ce-3714-411e-b225-0c769a170e59.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-5295d5ce-3714-411e-b225-0c769a170e59",
- "owner": {
- "substance": {
- "uuid": "NWKI-b19125a9-4499-3e0e-aa0c-7792401f4900"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DProtamine-2DRhodamine"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Rhodamine"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Rhodamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-530d1c38-f820-4849-b3bf-71605163bf76.json b/test/data/enm/study-NWKI-530d1c38-f820-4849-b3bf-71605163bf76.json
deleted file mode 100644
index a91a639..0000000
--- a/test/data/enm/study-NWKI-530d1c38-f820-4849-b3bf-71605163bf76.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-530d1c38-f820-4849-b3bf-71605163bf76",
- "owner": {
- "substance": {
- "uuid": "NWKI-245fc9be-5928-354e-8fd1-ae88663923f1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-545da080-c5eb-4a56-b10b-3390d3959238.json b/test/data/enm/study-NWKI-545da080-c5eb-4a56-b10b-3390d3959238.json
deleted file mode 100644
index 467d343..0000000
--- a/test/data/enm/study-NWKI-545da080-c5eb-4a56-b10b-3390d3959238.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-545da080-c5eb-4a56-b10b-3390d3959238",
- "owner": {
- "substance": {
- "uuid": "NWKI-6a8efcf8-a19c-3fb3-b8ca-3f4e1a09fcb0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -50.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-54b3ecd6-68b4-434d-bdaf-32a8c5a6f4f7.json b/test/data/enm/study-NWKI-54b3ecd6-68b4-434d-bdaf-32a8c5a6f4f7.json
deleted file mode 100644
index b26a23a..0000000
--- a/test/data/enm/study-NWKI-54b3ecd6-68b4-434d-bdaf-32a8c5a6f4f7.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-54b3ecd6-68b4-434d-bdaf-32a8c5a6f4f7",
- "owner": {
- "substance": {
- "uuid": "NWKI-dfbd99e5-c150-3a5e-9147-59255d42bebb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 13.1,
- "errorValue": 5.9
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-55eb46d4-4c78-42d2-9c3a-e131a3a7f19e.json b/test/data/enm/study-NWKI-55eb46d4-4c78-42d2-9c3a-e131a3a7f19e.json
deleted file mode 100644
index 83bf777..0000000
--- a/test/data/enm/study-NWKI-55eb46d4-4c78-42d2-9c3a-e131a3a7f19e.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-55eb46d4-4c78-42d2-9c3a-e131a3a7f19e",
- "owner": {
- "substance": {
- "uuid": "NWKI-605f4f43-028b-3a42-ae94-9852a9f6f5f8"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn301622h",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 331,
- "errorValue": 19
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-55f1adcf-2ae2-4f2f-b61b-b7fe65cf9650.json b/test/data/enm/study-NWKI-55f1adcf-2ae2-4f2f-b61b-b7fe65cf9650.json
deleted file mode 100644
index beed3ba..0000000
--- a/test/data/enm/study-NWKI-55f1adcf-2ae2-4f2f-b61b-b7fe65cf9650.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-55f1adcf-2ae2-4f2f-b61b-b7fe65cf9650",
- "owner": {
- "substance": {
- "uuid": "NWKI-c7bee4e3-8884-3e29-ad8b-38decf6146fd"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 36
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-560ae138-7a60-412e-bda8-15ef20c1c0d3.json b/test/data/enm/study-NWKI-560ae138-7a60-412e-bda8-15ef20c1c0d3.json
deleted file mode 100644
index 2f3bfdf..0000000
--- a/test/data/enm/study-NWKI-560ae138-7a60-412e-bda8-15ef20c1c0d3.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-560ae138-7a60-412e-bda8-15ef20c1c0d3",
- "owner": {
- "substance": {
- "uuid": "NWKI-417f0133-8f2c-3255-bdcf-7d71ac295d00"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 150,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-566d754e-ac76-4e29-a17e-6e7e815ba719.json b/test/data/enm/study-NWKI-566d754e-ac76-4e29-a17e-6e7e815ba719.json
deleted file mode 100644
index c9f20ec..0000000
--- a/test/data/enm/study-NWKI-566d754e-ac76-4e29-a17e-6e7e815ba719.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-566d754e-ac76-4e29-a17e-6e7e815ba719",
- "owner": {
- "substance": {
- "uuid": "NWKI-696f7b05-2dea-3a14-b080-fef134f4eff5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 12,
- "errorValue": 3.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-56fb25be-18b8-405b-be4f-be843856826b.json b/test/data/enm/study-NWKI-56fb25be-18b8-405b-be4f-be843856826b.json
deleted file mode 100644
index 12272f1..0000000
--- a/test/data/enm/study-NWKI-56fb25be-18b8-405b-be4f-be843856826b.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-56fb25be-18b8-405b-be4f-be843856826b",
- "owner": {
- "substance": {
- "uuid": "NWKI-ed06c39e-c7f2-3173-bd74-35b8257544b5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loQualifier": ">=",
- "loValue": 129,
- "upQualifier": "<=",
- "upValue": 155
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-575b7f67-e068-43e5-b8f4-fae5c192806b.json b/test/data/enm/study-NWKI-575b7f67-e068-43e5-b8f4-fae5c192806b.json
deleted file mode 100644
index 47539a4..0000000
--- a/test/data/enm/study-NWKI-575b7f67-e068-43e5-b8f4-fae5c192806b.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "uuid": "NWKI-575b7f67-e068-43e5-b8f4-fae5c192806b",
- "owner": {
- "substance": {
- "uuid": "NWKI-369d200e-2bfc-392d-ae00-ceb41fabd459"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Ag"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Ag"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "TMATCoating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "TMAT"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "SCC[N+](C)(C)C.[I-]"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "TMAT"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-576e0d8e-08a0-440c-a937-b655c96f1827.json b/test/data/enm/study-NWKI-576e0d8e-08a0-440c-a937-b655c96f1827.json
deleted file mode 100644
index 87812ba..0000000
--- a/test/data/enm/study-NWKI-576e0d8e-08a0-440c-a937-b655c96f1827.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-576e0d8e-08a0-440c-a937-b655c96f1827",
- "owner": {
- "substance": {
- "uuid": "NWKI-e5b618fd-dd48-3562-9a55-737ac7a68466"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -10.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-57abdeee-1b76-49b9-a3b3-a0e1e964f2d5.json b/test/data/enm/study-NWKI-57abdeee-1b76-49b9-a3b3-a0e1e964f2d5.json
deleted file mode 100644
index edab41a..0000000
--- a/test/data/enm/study-NWKI-57abdeee-1b76-49b9-a3b3-a0e1e964f2d5.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-57abdeee-1b76-49b9-a3b3-a0e1e964f2d5",
- "owner": {
- "substance": {
- "uuid": "NWKI-c0927a67-d21d-37e8-932d-fb1607e58aee"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Metabolic Activity",
- "guideline": [
- "Tetrazolium Salt Cleavage"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Tetrazolium Salt Cleavage"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Metabolic_Activity",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 80,
- "unit": "ug/cm^2"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 60
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-57c3ba51-9194-4872-ae89-221f6ca96ec2.json b/test/data/enm/study-NWKI-57c3ba51-9194-4872-ae89-221f6ca96ec2.json
deleted file mode 100644
index 409dfe2..0000000
--- a/test/data/enm/study-NWKI-57c3ba51-9194-4872-ae89-221f6ca96ec2.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-57c3ba51-9194-4872-ae89-221f6ca96ec2",
- "owner": {
- "substance": {
- "uuid": "NWKI-56d49cc3-4a76-354b-9a77-4b2ecb2dbef0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 10
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-57d53a2d-4c4e-41db-99aa-e8fcddac22b3.json b/test/data/enm/study-NWKI-57d53a2d-4c4e-41db-99aa-e8fcddac22b3.json
deleted file mode 100644
index b11110d..0000000
--- a/test/data/enm/study-NWKI-57d53a2d-4c4e-41db-99aa-e8fcddac22b3.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-57d53a2d-4c4e-41db-99aa-e8fcddac22b3",
- "owner": {
- "substance": {
- "uuid": "NWKI-0fef8d9c-b0c4-3e41-88d0-b85cd538a796"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.74
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-57e76541-d6b3-46ea-8b97-70dddfd9667b.json b/test/data/enm/study-NWKI-57e76541-d6b3-46ea-8b97-70dddfd9667b.json
deleted file mode 100644
index adc9451..0000000
--- a/test/data/enm/study-NWKI-57e76541-d6b3-46ea-8b97-70dddfd9667b.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-57e76541-d6b3-46ea-8b97-70dddfd9667b",
- "owner": {
- "substance": {
- "uuid": "NWKI-3b09fdd1-3024-3be3-b1c6-332b44f75f99"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.51
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-58446ed4-a39a-4505-b359-f1d3008edf25.json b/test/data/enm/study-NWKI-58446ed4-a39a-4505-b359-f1d3008edf25.json
deleted file mode 100644
index 53d4573..0000000
--- a/test/data/enm/study-NWKI-58446ed4-a39a-4505-b359-f1d3008edf25.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-58446ed4-a39a-4505-b359-f1d3008edf25",
- "owner": {
- "substance": {
- "uuid": "NWKI-845bf8fc-788d-38f2-be58-030f27c0d337"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-587bf2ec-a417-4834-8331-2272e3dd6d21.json b/test/data/enm/study-NWKI-587bf2ec-a417-4834-8331-2272e3dd6d21.json
deleted file mode 100644
index ae788dc..0000000
--- a/test/data/enm/study-NWKI-587bf2ec-a417-4834-8331-2272e3dd6d21.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "NWKI-587bf2ec-a417-4834-8331-2272e3dd6d21",
- "owner": {
- "substance": {
- "uuid": "NWKI-db562080-5286-327a-b813-6775c437385e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DFITC-2DRCOOH"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "RCOOH"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "O=CO[H]"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "RCOOH"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-58c79586-50bf-460d-830d-a14c8ad70f8e.json b/test/data/enm/study-NWKI-58c79586-50bf-460d-830d-a14c8ad70f8e.json
deleted file mode 100644
index 041e774..0000000
--- a/test/data/enm/study-NWKI-58c79586-50bf-460d-830d-a14c8ad70f8e.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-58c79586-50bf-460d-830d-a14c8ad70f8e",
- "owner": {
- "substance": {
- "uuid": "NWKI-916751bb-8457-3844-87c0-ada4c6afd1ab"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null,
- "Serum": {
- "loValue": "cMEM"
- }
- },
- "result": {
- "unit": "nm",
- "loValue": 137
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-58ebc4fe-bf67-4eba-ae0b-02a0964fa04d.json b/test/data/enm/study-NWKI-58ebc4fe-bf67-4eba-ae0b-02a0964fa04d.json
deleted file mode 100644
index 6a33b72..0000000
--- a/test/data/enm/study-NWKI-58ebc4fe-bf67-4eba-ae0b-02a0964fa04d.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-58ebc4fe-bf67-4eba-ae0b-02a0964fa04d",
- "owner": {
- "substance": {
- "uuid": "NWKI-d39efcf3-d871-34c2-ac1c-b48f35bde877"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 9.48,
- "errorValue": 1.26
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-5939b44d-6d55-4d26-80ff-9f9cd48c58e7.json b/test/data/enm/study-NWKI-5939b44d-6d55-4d26-80ff-9f9cd48c58e7.json
deleted file mode 100644
index 7f5cb64..0000000
--- a/test/data/enm/study-NWKI-5939b44d-6d55-4d26-80ff-9f9cd48c58e7.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-5939b44d-6d55-4d26-80ff-9f9cd48c58e7",
- "owner": {
- "substance": {
- "uuid": "NWKI-52edeff5-900d-3f5a-86ba-550e9b368239"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 50,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-59bb2ce9-3e8b-4b2a-9491-c6e331e716b1.json b/test/data/enm/study-NWKI-59bb2ce9-3e8b-4b2a-9491-c6e331e716b1.json
deleted file mode 100644
index 31740b6..0000000
--- a/test/data/enm/study-NWKI-59bb2ce9-3e8b-4b2a-9491-c6e331e716b1.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "NWKI-59bb2ce9-3e8b-4b2a-9491-c6e331e716b1",
- "owner": {
- "substance": {
- "uuid": "NWKI-e518c122-5f4f-3611-8b30-56b671883e5c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DED-2DAminoSPARK680"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Ethylene_Diamine"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "NCCN"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Ethylene_Diamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-5a65ec58-f00b-48b5-906b-d3eebf6d34b8.json b/test/data/enm/study-NWKI-5a65ec58-f00b-48b5-906b-d3eebf6d34b8.json
deleted file mode 100644
index cd86637..0000000
--- a/test/data/enm/study-NWKI-5a65ec58-f00b-48b5-906b-d3eebf6d34b8.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-5a65ec58-f00b-48b5-906b-d3eebf6d34b8",
- "owner": {
- "substance": {
- "uuid": "NWKI-37e2b8ec-0e57-3ed8-9afc-93a3030ee25f"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": 60.6,
- "errorValue": 15.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-5a74bb96-6612-4622-9aa5-e641a09c9a46.json b/test/data/enm/study-NWKI-5a74bb96-6612-4622-9aa5-e641a09c9a46.json
deleted file mode 100644
index 0f6e7a3..0000000
--- a/test/data/enm/study-NWKI-5a74bb96-6612-4622-9aa5-e641a09c9a46.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-5a74bb96-6612-4622-9aa5-e641a09c9a46",
- "owner": {
- "substance": {
- "uuid": "NWKI-8f7f774c-d727-33a9-adc6-9068524faf1c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DFITC-2DCOOH"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "FITC"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "FITC"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-5a843641-8dbf-4bc3-ab49-400d74d27bab.json b/test/data/enm/study-NWKI-5a843641-8dbf-4bc3-ab49-400d74d27bab.json
deleted file mode 100644
index 46abab4..0000000
--- a/test/data/enm/study-NWKI-5a843641-8dbf-4bc3-ab49-400d74d27bab.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-5a843641-8dbf-4bc3-ab49-400d74d27bab",
- "owner": {
- "substance": {
- "uuid": "NWKI-04d6ccd0-30ad-3ffc-9f06-8b13709d3a62"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/tx800289z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 25
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-5acb47b7-d27f-46e6-acfe-6b063106fa87.json b/test/data/enm/study-NWKI-5acb47b7-d27f-46e6-acfe-6b063106fa87.json
deleted file mode 100644
index 006a4d3..0000000
--- a/test/data/enm/study-NWKI-5acb47b7-d27f-46e6-acfe-6b063106fa87.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-5acb47b7-d27f-46e6-acfe-6b063106fa87",
- "owner": {
- "substance": {
- "uuid": "NWKI-97103918-5eeb-36a3-9981-3aa6dcef5d4c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 200,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-5bf85889-bc2d-442e-b94f-987670fd6289.json b/test/data/enm/study-NWKI-5bf85889-bc2d-442e-b94f-987670fd6289.json
deleted file mode 100644
index a373528..0000000
--- a/test/data/enm/study-NWKI-5bf85889-bc2d-442e-b94f-987670fd6289.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-5bf85889-bc2d-442e-b94f-987670fd6289",
- "owner": {
- "substance": {
- "uuid": "NWKI-155bb96c-2d7e-384d-b55d-45856eeda386"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.15
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-5cb2dd63-eaab-411b-97ee-e3f3bae24663.json b/test/data/enm/study-NWKI-5cb2dd63-eaab-411b-97ee-e3f3bae24663.json
deleted file mode 100644
index 7bbdfa3..0000000
--- a/test/data/enm/study-NWKI-5cb2dd63-eaab-411b-97ee-e3f3bae24663.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-5cb2dd63-eaab-411b-97ee-e3f3bae24663",
- "owner": {
- "substance": {
- "uuid": "NWKI-694f4202-c0ba-3ed9-a0f3-0a5ccba9e9c1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 226
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-5cc3a4e9-7c58-44cf-8e6f-5f297ff4ca6e.json b/test/data/enm/study-NWKI-5cc3a4e9-7c58-44cf-8e6f-5f297ff4ca6e.json
deleted file mode 100644
index dc9b88e..0000000
--- a/test/data/enm/study-NWKI-5cc3a4e9-7c58-44cf-8e6f-5f297ff4ca6e.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-5cc3a4e9-7c58-44cf-8e6f-5f297ff4ca6e",
- "owner": {
- "substance": {
- "uuid": "NWKI-e373781b-461e-35dd-ae27-4169b7d743af"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DFITC"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-5d7782f7-9f36-4183-a45f-f3e1ff12f8dd.json b/test/data/enm/study-NWKI-5d7782f7-9f36-4183-a45f-f3e1ff12f8dd.json
deleted file mode 100644
index e306744..0000000
--- a/test/data/enm/study-NWKI-5d7782f7-9f36-4183-a45f-f3e1ff12f8dd.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-5d7782f7-9f36-4183-a45f-f3e1ff12f8dd",
- "owner": {
- "substance": {
- "uuid": "NWKI-605f4f43-028b-3a42-ae94-9852a9f6f5f8"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn301622h",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "TEM",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 291,
- "errorValue": 9
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-5da37282-461c-4564-bfde-d111e4f79e1e.json b/test/data/enm/study-NWKI-5da37282-461c-4564-bfde-d111e4f79e1e.json
deleted file mode 100644
index 1e43c29..0000000
--- a/test/data/enm/study-NWKI-5da37282-461c-4564-bfde-d111e4f79e1e.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-5da37282-461c-4564-bfde-d111e4f79e1e",
- "owner": {
- "substance": {
- "uuid": "NWKI-758c06ae-dc1f-3cbe-a409-91d14e5113d1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -6.54
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-5e7ff0d3-fbef-44a0-bbdb-bb0c03fff028.json b/test/data/enm/study-NWKI-5e7ff0d3-fbef-44a0-bbdb-bb0c03fff028.json
deleted file mode 100644
index a370173..0000000
--- a/test/data/enm/study-NWKI-5e7ff0d3-fbef-44a0-bbdb-bb0c03fff028.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-5e7ff0d3-fbef-44a0-bbdb-bb0c03fff028",
- "owner": {
- "substance": {
- "uuid": "NWKI-dd6b8324-524e-3281-8bf4-09044fbf01ab"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 40,
- "upQualifier": "<=",
- "upValue": 70
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-5f0da6d9-855e-49d6-a566-f8485a4d71f7.json b/test/data/enm/study-NWKI-5f0da6d9-855e-49d6-a566-f8485a4d71f7.json
deleted file mode 100644
index 0b91161..0000000
--- a/test/data/enm/study-NWKI-5f0da6d9-855e-49d6-a566-f8485a4d71f7.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-5f0da6d9-855e-49d6-a566-f8485a4d71f7",
- "owner": {
- "substance": {
- "uuid": "NWKI-3e42f6e5-635a-3f1e-a51a-39ce26751ec9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.82
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-5f0f3ffb-4032-48eb-acec-e47064fd0318.json b/test/data/enm/study-NWKI-5f0f3ffb-4032-48eb-acec-e47064fd0318.json
deleted file mode 100644
index 14d5e8e..0000000
--- a/test/data/enm/study-NWKI-5f0f3ffb-4032-48eb-acec-e47064fd0318.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-5f0f3ffb-4032-48eb-acec-e47064fd0318",
- "owner": {
- "substance": {
- "uuid": "NWKI-cad5bf58-cc90-33e5-88bb-bad4c9f9fe9e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": 2.34
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-5f396653-ef15-4c28-b5fb-5b0a89ff145e.json b/test/data/enm/study-NWKI-5f396653-ef15-4c28-b5fb-5b0a89ff145e.json
deleted file mode 100644
index cfae9bb..0000000
--- a/test/data/enm/study-NWKI-5f396653-ef15-4c28-b5fb-5b0a89ff145e.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-5f396653-ef15-4c28-b5fb-5b0a89ff145e",
- "owner": {
- "substance": {
- "uuid": "NWKI-6d5462cc-7e11-3919-b769-135f56fd2536"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.soilbio.2013.01.016",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loQualifier": ">=",
- "loValue": 8,
- "upQualifier": "<=",
- "upValue": 15
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-5fc1235f-99c4-411a-9173-17421cc226c4.json b/test/data/enm/study-NWKI-5fc1235f-99c4-411a-9173-17421cc226c4.json
deleted file mode 100644
index 29d8c64..0000000
--- a/test/data/enm/study-NWKI-5fc1235f-99c4-411a-9173-17421cc226c4.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-5fc1235f-99c4-411a-9173-17421cc226c4",
- "owner": {
- "substance": {
- "uuid": "NWKI-e866549e-38cf-3b98-a0b1-a483e275d261"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1080/10934520600966177",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 1,
- "upQualifier": "<=",
- "upValue": 39
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-6013fae6-bdb8-4b76-b5e1-1e50b224f6ad.json b/test/data/enm/study-NWKI-6013fae6-bdb8-4b76-b5e1-1e50b224f6ad.json
deleted file mode 100644
index fde9832..0000000
--- a/test/data/enm/study-NWKI-6013fae6-bdb8-4b76-b5e1-1e50b224f6ad.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "uuid": "NWKI-6013fae6-bdb8-4b76-b5e1-1e50b224f6ad",
- "owner": {
- "substance": {
- "uuid": "NWKI-a95db64e-5499-371a-bdce-a4aa31f93218"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Ag"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Ag"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "MEECoating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "MEE"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "SCCOCCO"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "MEE"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-60bad0b9-135c-4b51-b477-8873d6b53e62.json b/test/data/enm/study-NWKI-60bad0b9-135c-4b51-b477-8873d6b53e62.json
deleted file mode 100644
index 9357f2f..0000000
--- a/test/data/enm/study-NWKI-60bad0b9-135c-4b51-b477-8873d6b53e62.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-60bad0b9-135c-4b51-b477-8873d6b53e62",
- "owner": {
- "substance": {
- "uuid": "NWKI-ede0d5b5-191a-3003-ac70-a97397ea7bb2"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn301622h",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 101,
- "errorValue": 7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-60c801de-4063-4e94-badd-5b3ea137ee2e.json b/test/data/enm/study-NWKI-60c801de-4063-4e94-badd-5b3ea137ee2e.json
deleted file mode 100644
index 2f01705..0000000
--- a/test/data/enm/study-NWKI-60c801de-4063-4e94-badd-5b3ea137ee2e.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-60c801de-4063-4e94-badd-5b3ea137ee2e",
- "owner": {
- "substance": {
- "uuid": "NWKI-c4c91023-5b41-3d6d-bb4f-ee1152926be0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 10,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 95
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-60c8a08a-5a5d-4e78-9eca-c17fa70ada6e.json b/test/data/enm/study-NWKI-60c8a08a-5a5d-4e78-9eca-c17fa70ada6e.json
deleted file mode 100644
index 3dfed13..0000000
--- a/test/data/enm/study-NWKI-60c8a08a-5a5d-4e78-9eca-c17fa70ada6e.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-60c8a08a-5a5d-4e78-9eca-c17fa70ada6e",
- "owner": {
- "substance": {
- "uuid": "NWKI-0a6e319e-71fc-37f7-b88d-fbda2e07ccc1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 10,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 98
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-60d8ff8a-334d-4aec-8840-fe9237f2ed52.json b/test/data/enm/study-NWKI-60d8ff8a-334d-4aec-8840-fe9237f2ed52.json
deleted file mode 100644
index 01dc975..0000000
--- a/test/data/enm/study-NWKI-60d8ff8a-334d-4aec-8840-fe9237f2ed52.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-60d8ff8a-334d-4aec-8840-fe9237f2ed52",
- "owner": {
- "substance": {
- "uuid": "NWKI-8ef21404-e101-37c8-8206-32f526d75012"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 10,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-61140943-e725-4000-adda-54d56323cc38.json b/test/data/enm/study-NWKI-61140943-e725-4000-adda-54d56323cc38.json
deleted file mode 100644
index a8aab4d..0000000
--- a/test/data/enm/study-NWKI-61140943-e725-4000-adda-54d56323cc38.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-61140943-e725-4000-adda-54d56323cc38",
- "owner": {
- "substance": {
- "uuid": "NWKI-c012600e-ca8e-31db-a7a8-d9f6a74e2464"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-61169e69-160a-4883-bb5b-57864cfaa226.json b/test/data/enm/study-NWKI-61169e69-160a-4883-bb5b-57864cfaa226.json
deleted file mode 100644
index a5a0792..0000000
--- a/test/data/enm/study-NWKI-61169e69-160a-4883-bb5b-57864cfaa226.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-61169e69-160a-4883-bb5b-57864cfaa226",
- "owner": {
- "substance": {
- "uuid": "NWKI-c5e226b0-d405-32d5-a652-7f7f1f0eb55d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 81,
- "errorValue": 12
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-615e9046-2352-43b1-8061-c5863c389eba.json b/test/data/enm/study-NWKI-615e9046-2352-43b1-8061-c5863c389eba.json
deleted file mode 100644
index 6090863..0000000
--- a/test/data/enm/study-NWKI-615e9046-2352-43b1-8061-c5863c389eba.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-615e9046-2352-43b1-8061-c5863c389eba",
- "owner": {
- "substance": {
- "uuid": "NWKI-97103918-5eeb-36a3-9981-3aa6dcef5d4c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 10,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-619ad025-d12a-40d6-b802-11c7bc1c5f0c.json b/test/data/enm/study-NWKI-619ad025-d12a-40d6-b802-11c7bc1c5f0c.json
deleted file mode 100644
index f786e30..0000000
--- a/test/data/enm/study-NWKI-619ad025-d12a-40d6-b802-11c7bc1c5f0c.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-619ad025-d12a-40d6-b802-11c7bc1c5f0c",
- "owner": {
- "substance": {
- "uuid": "NWKI-ab2d4bdd-7a72-3e26-8552-5bb6027896bb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn202116p",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -12.2,
- "errorValue": 0.97
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-61ac7714-8bcb-4b22-9c49-8897a34459f8.json b/test/data/enm/study-NWKI-61ac7714-8bcb-4b22-9c49-8897a34459f8.json
deleted file mode 100644
index d786c14..0000000
--- a/test/data/enm/study-NWKI-61ac7714-8bcb-4b22-9c49-8897a34459f8.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-61ac7714-8bcb-4b22-9c49-8897a34459f8",
- "owner": {
- "substance": {
- "uuid": "NWKI-afc33b0f-f6ce-3c1b-8a3d-cede13515323"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe2O3"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe2O3"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DAminoSPARK680"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Amino_SPARK680"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Amino_SPARK680"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-61cd966e-d293-4e74-810d-c96d7226a885.json b/test/data/enm/study-NWKI-61cd966e-d293-4e74-810d-c96d7226a885.json
deleted file mode 100644
index 28d1eba..0000000
--- a/test/data/enm/study-NWKI-61cd966e-d293-4e74-810d-c96d7226a885.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-61cd966e-d293-4e74-810d-c96d7226a885",
- "owner": {
- "substance": {
- "uuid": "NWKI-c0927a67-d21d-37e8-932d-fb1607e58aee"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Metabolic Activity",
- "guideline": [
- "Tetrazolium Salt Cleavage"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Tetrazolium Salt Cleavage"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Metabolic_Activity",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-61e74c49-caba-449a-ab8b-79ce619474c7.json b/test/data/enm/study-NWKI-61e74c49-caba-449a-ab8b-79ce619474c7.json
deleted file mode 100644
index 01e269b..0000000
--- a/test/data/enm/study-NWKI-61e74c49-caba-449a-ab8b-79ce619474c7.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-61e74c49-caba-449a-ab8b-79ce619474c7",
- "owner": {
- "substance": {
- "uuid": "NWKI-8c5b9350-2c03-3173-9615-cabfbe6929c9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002167_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002167",
- "title": "BAO_0002167 Genotoxicity Assay"
- },
- "endpoint": "DNA in Tail",
- "guideline": [
- "Fpg-2Dmodified Comet Assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Fpg-2Dmodified Comet Assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "DNA_in_Tail",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- },
- "FPG Content": {
- "loValue": 100
- }
- },
- "result": {
- "unit": "%",
- "loValue": 7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-623ab83d-a129-4153-b30d-a653ecea4137.json b/test/data/enm/study-NWKI-623ab83d-a129-4153-b30d-a653ecea4137.json
deleted file mode 100644
index 622ca2e..0000000
--- a/test/data/enm/study-NWKI-623ab83d-a129-4153-b30d-a653ecea4137.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-623ab83d-a129-4153-b30d-a653ecea4137",
- "owner": {
- "substance": {
- "uuid": "NWKI-52edeff5-900d-3f5a-86ba-550e9b368239"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 100,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-62723dfc-941e-4efa-971d-d4061c205c37.json b/test/data/enm/study-NWKI-62723dfc-941e-4efa-971d-d4061c205c37.json
deleted file mode 100644
index 6a68dcd..0000000
--- a/test/data/enm/study-NWKI-62723dfc-941e-4efa-971d-d4061c205c37.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-62723dfc-941e-4efa-971d-d4061c205c37",
- "owner": {
- "substance": {
- "uuid": "NWKI-56d49cc3-4a76-354b-9a77-4b2ecb2dbef0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "BET",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 70
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-62c6c671-de0c-421a-9359-a4fb45ba7d0a.json b/test/data/enm/study-NWKI-62c6c671-de0c-421a-9359-a4fb45ba7d0a.json
deleted file mode 100644
index 2cac26b..0000000
--- a/test/data/enm/study-NWKI-62c6c671-de0c-421a-9359-a4fb45ba7d0a.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "uuid": "NWKI-62c6c671-de0c-421a-9359-a4fb45ba7d0a",
- "owner": {
- "substance": {
- "uuid": "NWKI-77fb742b-c676-3ad7-bd19-6d5ec1df62ad"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DED-2DVT680"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Ethylene_Diamine"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "NCCN"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Ethylene_Diamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-632864fb-ead5-48bd-abdf-93ac2d6db3d2.json b/test/data/enm/study-NWKI-632864fb-ead5-48bd-abdf-93ac2d6db3d2.json
deleted file mode 100644
index e052db2..0000000
--- a/test/data/enm/study-NWKI-632864fb-ead5-48bd-abdf-93ac2d6db3d2.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-632864fb-ead5-48bd-abdf-93ac2d6db3d2",
- "owner": {
- "substance": {
- "uuid": "NWKI-812e122b-8bee-350d-8aea-aaaa88ce84dd"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 10,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-6340f201-e40f-44e0-9cc0-bd91711785b2.json b/test/data/enm/study-NWKI-6340f201-e40f-44e0-9cc0-bd91711785b2.json
deleted file mode 100644
index 0511926..0000000
--- a/test/data/enm/study-NWKI-6340f201-e40f-44e0-9cc0-bd91711785b2.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-6340f201-e40f-44e0-9cc0-bd91711785b2",
- "owner": {
- "substance": {
- "uuid": "NWKI-473ed1d8-ae5a-3c80-b3f7-50dbc4fd9a3b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -21,
- "errorValue": 5.16
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-637e25c9-223d-4680-b358-bf11344c0385.json b/test/data/enm/study-NWKI-637e25c9-223d-4680-b358-bf11344c0385.json
deleted file mode 100644
index 07f6b02..0000000
--- a/test/data/enm/study-NWKI-637e25c9-223d-4680-b358-bf11344c0385.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-637e25c9-223d-4680-b358-bf11344c0385",
- "owner": {
- "substance": {
- "uuid": "NWKI-6cab56b4-69d9-36e0-8c17-f467d08b2555"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -12.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-63d64d8b-df0b-4dae-84e6-ae6bd3ac623c.json b/test/data/enm/study-NWKI-63d64d8b-df0b-4dae-84e6-ae6bd3ac623c.json
deleted file mode 100644
index 3888c56..0000000
--- a/test/data/enm/study-NWKI-63d64d8b-df0b-4dae-84e6-ae6bd3ac623c.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-63d64d8b-df0b-4dae-84e6-ae6bd3ac623c",
- "owner": {
- "substance": {
- "uuid": "NWKI-7efe542f-264c-3b57-a516-410b730df963"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Mean Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 28
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-63de74e0-3b63-435a-ad62-cc9645d3cc15.json b/test/data/enm/study-NWKI-63de74e0-3b63-435a-ad62-cc9645d3cc15.json
deleted file mode 100644
index bebe406..0000000
--- a/test/data/enm/study-NWKI-63de74e0-3b63-435a-ad62-cc9645d3cc15.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-63de74e0-3b63-435a-ad62-cc9645d3cc15",
- "owner": {
- "substance": {
- "uuid": "NWKI-438d1468-d5d7-3977-9dab-15a3a05add38"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Metabolic Activity",
- "guideline": [
- "Tetrazolium Salt Cleavage"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Tetrazolium Salt Cleavage"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Metabolic_Activity",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 120
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-63df02d3-d55b-4a25-abfd-f73d2b958075.json b/test/data/enm/study-NWKI-63df02d3-d55b-4a25-abfd-f73d2b958075.json
deleted file mode 100644
index 280bd5f..0000000
--- a/test/data/enm/study-NWKI-63df02d3-d55b-4a25-abfd-f73d2b958075.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-63df02d3-d55b-4a25-abfd-f73d2b958075",
- "owner": {
- "substance": {
- "uuid": "NWKI-11bd7878-7fd9-365c-8f01-a452d9c7f4ec"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/tx800289z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 14
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-640f103a-1955-416a-a656-356884730cea.json b/test/data/enm/study-NWKI-640f103a-1955-416a-a656-356884730cea.json
deleted file mode 100644
index 69cc83e..0000000
--- a/test/data/enm/study-NWKI-640f103a-1955-416a-a656-356884730cea.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-640f103a-1955-416a-a656-356884730cea",
- "owner": {
- "substance": {
- "uuid": "NWKI-f3be029d-68f6-310a-87a4-ceffee1b4eda"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 8,
- "upQualifier": "<=",
- "upValue": 15
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-64af3435-8edb-4585-8167-3a4e8ed2ea6a.json b/test/data/enm/study-NWKI-64af3435-8edb-4585-8167-3a4e8ed2ea6a.json
deleted file mode 100644
index 9262279..0000000
--- a/test/data/enm/study-NWKI-64af3435-8edb-4585-8167-3a4e8ed2ea6a.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-64af3435-8edb-4585-8167-3a4e8ed2ea6a",
- "owner": {
- "substance": {
- "uuid": "NWKI-d0a80e1b-1b7f-35c7-9185-244ccc2c04c2"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 88,
- "errorValue": 12
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-64c482f1-7978-4160-8430-08ab8392c4a2.json b/test/data/enm/study-NWKI-64c482f1-7978-4160-8430-08ab8392c4a2.json
deleted file mode 100644
index 0d57126..0000000
--- a/test/data/enm/study-NWKI-64c482f1-7978-4160-8430-08ab8392c4a2.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-64c482f1-7978-4160-8430-08ab8392c4a2",
- "owner": {
- "substance": {
- "uuid": "NWKI-6e6a5fec-23c2-3fff-8522-a22689091196"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 5,
- "upQualifier": "<=",
- "upValue": 15
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-64f89bf1-d825-4cdb-8c59-87301ec7befc.json b/test/data/enm/study-NWKI-64f89bf1-d825-4cdb-8c59-87301ec7befc.json
deleted file mode 100644
index 732e6ba..0000000
--- a/test/data/enm/study-NWKI-64f89bf1-d825-4cdb-8c59-87301ec7befc.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-64f89bf1-d825-4cdb-8c59-87301ec7befc",
- "owner": {
- "substance": {
- "uuid": "NWKI-916751bb-8457-3844-87c0-ada4c6afd1ab"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null,
- "Serum": {
- "loValue": "PBS"
- }
- },
- "result": {
- "unit": "nm",
- "loValue": 76
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-65922873-2b18-467a-8b0d-7d985d296419.json b/test/data/enm/study-NWKI-65922873-2b18-467a-8b0d-7d985d296419.json
deleted file mode 100644
index 723c9f4..0000000
--- a/test/data/enm/study-NWKI-65922873-2b18-467a-8b0d-7d985d296419.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-65922873-2b18-467a-8b0d-7d985d296419",
- "owner": {
- "substance": {
- "uuid": "NWKI-a95db64e-5499-371a-bdce-a4aa31f93218"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn200546k",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 0.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-65e45fc5-68ff-416e-b735-6e10a7eae383.json b/test/data/enm/study-NWKI-65e45fc5-68ff-416e-b735-6e10a7eae383.json
deleted file mode 100644
index 7d66df9..0000000
--- a/test/data/enm/study-NWKI-65e45fc5-68ff-416e-b735-6e10a7eae383.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-65e45fc5-68ff-416e-b735-6e10a7eae383",
- "owner": {
- "substance": {
- "uuid": "NWKI-8a4b3e23-3327-3421-b20a-2e71939b44b1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -20.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-65f7ef57-354f-4d82-ac39-a4e4aafb49b0.json b/test/data/enm/study-NWKI-65f7ef57-354f-4d82-ac39-a4e4aafb49b0.json
deleted file mode 100644
index 773e990..0000000
--- a/test/data/enm/study-NWKI-65f7ef57-354f-4d82-ac39-a4e4aafb49b0.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-65f7ef57-354f-4d82-ac39-a4e4aafb49b0",
- "owner": {
- "substance": {
- "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Colon HT29",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 60,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 4
- }
- },
- "result": {
- "unit": null,
- "loValue": 40
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-66eb1f6f-5461-4ab5-a476-38de7568df69.json b/test/data/enm/study-NWKI-66eb1f6f-5461-4ab5-a476-38de7568df69.json
deleted file mode 100644
index 6207cdc..0000000
--- a/test/data/enm/study-NWKI-66eb1f6f-5461-4ab5-a476-38de7568df69.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-66eb1f6f-5461-4ab5-a476-38de7568df69",
- "owner": {
- "substance": {
- "uuid": "NWKI-bb97285c-a58f-34c0-aa16-d5eac02280fa"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 4.98,
- "errorValue": 0.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-66eeb62c-4a93-4a73-bb8a-276e5552057b.json b/test/data/enm/study-NWKI-66eeb62c-4a93-4a73-bb8a-276e5552057b.json
deleted file mode 100644
index b47921a..0000000
--- a/test/data/enm/study-NWKI-66eeb62c-4a93-4a73-bb8a-276e5552057b.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-66eeb62c-4a93-4a73-bb8a-276e5552057b",
- "owner": {
- "substance": {
- "uuid": "NWKI-de03994b-9d74-3e39-aa41-e7df34384442"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 100,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-671aae68-2d9e-4cda-b5d5-136d0abcb830.json b/test/data/enm/study-NWKI-671aae68-2d9e-4cda-b5d5-136d0abcb830.json
deleted file mode 100644
index 16233ae..0000000
--- a/test/data/enm/study-NWKI-671aae68-2d9e-4cda-b5d5-136d0abcb830.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-671aae68-2d9e-4cda-b5d5-136d0abcb830",
- "owner": {
- "substance": {
- "uuid": "NWKI-d63286d0-3205-3216-92ce-e9e2632aca9e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-6784e795-4fb3-45e8-8fca-faeb49758250.json b/test/data/enm/study-NWKI-6784e795-4fb3-45e8-8fca-faeb49758250.json
deleted file mode 100644
index dc8980f..0000000
--- a/test/data/enm/study-NWKI-6784e795-4fb3-45e8-8fca-faeb49758250.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-6784e795-4fb3-45e8-8fca-faeb49758250",
- "owner": {
- "substance": {
- "uuid": "NWKI-395bf212-b710-3385-9c23-715a7055b015"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Metabolic Activity",
- "guideline": [
- "Tetrazolium Salt Cleavage"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Tetrazolium Salt Cleavage"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Metabolic_Activity",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 80,
- "unit": "ug/cm^2"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-682685bb-7a15-4b40-abf0-1f94320c83c4.json b/test/data/enm/study-NWKI-682685bb-7a15-4b40-abf0-1f94320c83c4.json
deleted file mode 100644
index 65b92e7..0000000
--- a/test/data/enm/study-NWKI-682685bb-7a15-4b40-abf0-1f94320c83c4.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-682685bb-7a15-4b40-abf0-1f94320c83c4",
- "owner": {
- "substance": {
- "uuid": "NWKI-8f43d9fb-94ae-3d2b-8bb6-e8eb060e3b1b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Isoelectric Point",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ISOELECTRIC POINT",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": 8.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-683a3a11-0be9-4fbe-a659-ce59d3de9778.json b/test/data/enm/study-NWKI-683a3a11-0be9-4fbe-a659-ce59d3de9778.json
deleted file mode 100644
index 38ec789..0000000
--- a/test/data/enm/study-NWKI-683a3a11-0be9-4fbe-a659-ce59d3de9778.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-683a3a11-0be9-4fbe-a659-ce59d3de9778",
- "owner": {
- "substance": {
- "uuid": "NWKI-0866f605-4cfb-32a2-a704-2cf2a8d3d9a6"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 3.45
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-68518793-a783-4d93-94ce-118ae5876f5f.json b/test/data/enm/study-NWKI-68518793-a783-4d93-94ce-118ae5876f5f.json
deleted file mode 100644
index 168188c..0000000
--- a/test/data/enm/study-NWKI-68518793-a783-4d93-94ce-118ae5876f5f.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-68518793-a783-4d93-94ce-118ae5876f5f",
- "owner": {
- "substance": {
- "uuid": "NWKI-8667bfb7-a5da-3eb0-b9d7-86e2c8f06f19"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "TEM",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 19.2,
- "errorValue": 4.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-6882b12d-f37a-4512-b33a-0cf922f61e1f.json b/test/data/enm/study-NWKI-6882b12d-f37a-4512-b33a-0cf922f61e1f.json
deleted file mode 100644
index 911346a..0000000
--- a/test/data/enm/study-NWKI-6882b12d-f37a-4512-b33a-0cf922f61e1f.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-6882b12d-f37a-4512-b33a-0cf922f61e1f",
- "owner": {
- "substance": {
- "uuid": "NWKI-6b1b44fa-70c1-3034-9c4b-7efb334762e0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "Shape",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Rutile-Anatase"
- },
- "effects": [
- {
- "endpoint": "SHAPE",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": null,
- "textValue": "Rutile-Anatase"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-691d614d-a497-4a8f-bfdc-a6375b2e5230.json b/test/data/enm/study-NWKI-691d614d-a497-4a8f-bfdc-a6375b2e5230.json
deleted file mode 100644
index affbce0..0000000
--- a/test/data/enm/study-NWKI-691d614d-a497-4a8f-bfdc-a6375b2e5230.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-691d614d-a497-4a8f-bfdc-a6375b2e5230",
- "owner": {
- "substance": {
- "uuid": "NWKI-9a13f473-8a29-32e4-9653-ec03f5fb8923"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "CdSe"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "CdSe"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "AmphPolymer-2DPEG"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Amphiphillic_Polymer"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Amphiphillic_Polymer"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-692e09d2-5c50-48ac-99ae-5f29d6d76c6b.json b/test/data/enm/study-NWKI-692e09d2-5c50-48ac-99ae-5f29d6d76c6b.json
deleted file mode 100644
index 962f9fd..0000000
--- a/test/data/enm/study-NWKI-692e09d2-5c50-48ac-99ae-5f29d6d76c6b.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-692e09d2-5c50-48ac-99ae-5f29d6d76c6b",
- "owner": {
- "substance": {
- "uuid": "NWKI-de03994b-9d74-3e39-aa41-e7df34384442"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 10,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-6967b484-7d24-4415-b944-ba5a978a90e5.json b/test/data/enm/study-NWKI-6967b484-7d24-4415-b944-ba5a978a90e5.json
deleted file mode 100644
index 5a5ae1b..0000000
--- a/test/data/enm/study-NWKI-6967b484-7d24-4415-b944-ba5a978a90e5.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-6967b484-7d24-4415-b944-ba5a978a90e5",
- "owner": {
- "substance": {
- "uuid": "NWKI-506de59a-ae92-361b-a934-0fdfa41101c0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DVT680-2DProtamine"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Protamine"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Protamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-697e44f6-d1ab-4c2d-a376-b27b73527cde.json b/test/data/enm/study-NWKI-697e44f6-d1ab-4c2d-a376-b27b73527cde.json
deleted file mode 100644
index 030ac63..0000000
--- a/test/data/enm/study-NWKI-697e44f6-d1ab-4c2d-a376-b27b73527cde.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-697e44f6-d1ab-4c2d-a376-b27b73527cde",
- "owner": {
- "substance": {
- "uuid": "NWKI-4551e0f7-e515-3cdb-a099-c2b99b04883d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 3.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-69eced5c-94d1-4166-b97f-16df82011345.json b/test/data/enm/study-NWKI-69eced5c-94d1-4166-b97f-16df82011345.json
deleted file mode 100644
index 9b5b4be..0000000
--- a/test/data/enm/study-NWKI-69eced5c-94d1-4166-b97f-16df82011345.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-69eced5c-94d1-4166-b97f-16df82011345",
- "owner": {
- "substance": {
- "uuid": "NWKI-a32cb420-7aa2-3130-9612-edfe833d83fc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1080/10934520600966177",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 50,
- "upQualifier": "<=",
- "upValue": 70
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-6a508e43-b24e-4c97-b503-62c22c4f73ce.json b/test/data/enm/study-NWKI-6a508e43-b24e-4c97-b503-62c22c4f73ce.json
deleted file mode 100644
index 34fdff1..0000000
--- a/test/data/enm/study-NWKI-6a508e43-b24e-4c97-b503-62c22c4f73ce.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-6a508e43-b24e-4c97-b503-62c22c4f73ce",
- "owner": {
- "substance": {
- "uuid": "NWKI-bec49753-e5ff-3f5d-96a4-69a07da2de45"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 22.5,
- "errorValue": 6.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-6ab0a013-da8f-44be-938b-9371e5d3204a.json b/test/data/enm/study-NWKI-6ab0a013-da8f-44be-938b-9371e5d3204a.json
deleted file mode 100644
index d7039c6..0000000
--- a/test/data/enm/study-NWKI-6ab0a013-da8f-44be-938b-9371e5d3204a.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-6ab0a013-da8f-44be-938b-9371e5d3204a",
- "owner": {
- "substance": {
- "uuid": "NWKI-04887adf-9687-3699-8054-e7e3f695e6db"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 15
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-6abcbd39-35c8-49c6-87b5-df816062ff1e.json b/test/data/enm/study-NWKI-6abcbd39-35c8-49c6-87b5-df816062ff1e.json
deleted file mode 100644
index 335cc67..0000000
--- a/test/data/enm/study-NWKI-6abcbd39-35c8-49c6-87b5-df816062ff1e.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-6abcbd39-35c8-49c6-87b5-df816062ff1e",
- "owner": {
- "substance": {
- "uuid": "NWKI-ad1d5068-29cd-3d8c-9ed0-44ed4ce06ddd"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DVT680"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "VT680"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "VT680"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-6ac5caa9-3bac-4c7b-82a5-a2a8dbd9662e.json b/test/data/enm/study-NWKI-6ac5caa9-3bac-4c7b-82a5-a2a8dbd9662e.json
deleted file mode 100644
index ac6050e..0000000
--- a/test/data/enm/study-NWKI-6ac5caa9-3bac-4c7b-82a5-a2a8dbd9662e.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-6ac5caa9-3bac-4c7b-82a5-a2a8dbd9662e",
- "owner": {
- "substance": {
- "uuid": "NWKI-4beee533-65e4-364a-adb7-7a520180de61"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Mean Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 140
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-6b99a175-d74d-4b75-8d95-6c5cdfd44b77.json b/test/data/enm/study-NWKI-6b99a175-d74d-4b75-8d95-6c5cdfd44b77.json
deleted file mode 100644
index dd7f5e4..0000000
--- a/test/data/enm/study-NWKI-6b99a175-d74d-4b75-8d95-6c5cdfd44b77.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-6b99a175-d74d-4b75-8d95-6c5cdfd44b77",
- "owner": {
- "substance": {
- "uuid": "NWKI-e4dab3d9-2699-3a0b-9e9c-f257088142cc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 150,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-6baece3d-5a42-491e-8a52-1e6dcb6f9c16.json b/test/data/enm/study-NWKI-6baece3d-5a42-491e-8a52-1e6dcb6f9c16.json
deleted file mode 100644
index 0e94d31..0000000
--- a/test/data/enm/study-NWKI-6baece3d-5a42-491e-8a52-1e6dcb6f9c16.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "uuid": "NWKI-6baece3d-5a42-491e-8a52-1e6dcb6f9c16",
- "owner": {
- "substance": {
- "uuid": "NWKI-8196e92b-c46d-3c14-9410-e87992810710"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "ED-2DPVA"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Ethylene_Diamine"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "NCCN"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Ethylene_Diamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-6bbb3609-fac2-40f4-b5bd-5fe1a1752123.json b/test/data/enm/study-NWKI-6bbb3609-fac2-40f4-b5bd-5fe1a1752123.json
deleted file mode 100644
index 6e14909..0000000
--- a/test/data/enm/study-NWKI-6bbb3609-fac2-40f4-b5bd-5fe1a1752123.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-6bbb3609-fac2-40f4-b5bd-5fe1a1752123",
- "owner": {
- "substance": {
- "uuid": "NWKI-438d1468-d5d7-3977-9dab-15a3a05add38"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Metabolic Activity",
- "guideline": [
- "Tetrazolium Salt Cleavage"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Tetrazolium Salt Cleavage"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Metabolic_Activity",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 80,
- "unit": "ug/cm^2"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 135
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-6bf0a7f3-3346-488b-b1e9-1955be794790.json b/test/data/enm/study-NWKI-6bf0a7f3-3346-488b-b1e9-1955be794790.json
deleted file mode 100644
index 5772011..0000000
--- a/test/data/enm/study-NWKI-6bf0a7f3-3346-488b-b1e9-1955be794790.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-6bf0a7f3-3346-488b-b1e9-1955be794790",
- "owner": {
- "substance": {
- "uuid": "NWKI-ec00c05f-0b35-3c5a-b16f-7a3560213764"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DFTIC-2DSI"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "FITC"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "FITC"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-6bf2f56b-24a9-4340-b7f5-8e45fe446d9c.json b/test/data/enm/study-NWKI-6bf2f56b-24a9-4340-b7f5-8e45fe446d9c.json
deleted file mode 100644
index 2243b72..0000000
--- a/test/data/enm/study-NWKI-6bf2f56b-24a9-4340-b7f5-8e45fe446d9c.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-6bf2f56b-24a9-4340-b7f5-8e45fe446d9c",
- "owner": {
- "substance": {
- "uuid": "NWKI-5f88a526-3e3f-3da5-8082-8d1da0cdfefa"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 13
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-6bfc3b55-c53c-4b28-a094-351b9097689a.json b/test/data/enm/study-NWKI-6bfc3b55-c53c-4b28-a094-351b9097689a.json
deleted file mode 100644
index 2aff23b..0000000
--- a/test/data/enm/study-NWKI-6bfc3b55-c53c-4b28-a094-351b9097689a.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-6bfc3b55-c53c-4b28-a094-351b9097689a",
- "owner": {
- "substance": {
- "uuid": "NWKI-71060af4-1613-35cf-95ee-2a039be0388a"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 76,
- "errorValue": 10.6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-6c5523aa-3814-41a9-8ecf-f3d9e1fe54a1.json b/test/data/enm/study-NWKI-6c5523aa-3814-41a9-8ecf-f3d9e1fe54a1.json
deleted file mode 100644
index 729d8c5..0000000
--- a/test/data/enm/study-NWKI-6c5523aa-3814-41a9-8ecf-f3d9e1fe54a1.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-6c5523aa-3814-41a9-8ecf-f3d9e1fe54a1",
- "owner": {
- "substance": {
- "uuid": "NWKI-e078849d-6137-33fc-b103-d458cb77184a"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn301622h",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 110,
- "errorValue": 3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-6d2a9c66-a782-4fce-be33-3570612ae7f9.json b/test/data/enm/study-NWKI-6d2a9c66-a782-4fce-be33-3570612ae7f9.json
deleted file mode 100644
index b760774..0000000
--- a/test/data/enm/study-NWKI-6d2a9c66-a782-4fce-be33-3570612ae7f9.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-6d2a9c66-a782-4fce-be33-3570612ae7f9",
- "owner": {
- "substance": {
- "uuid": "NWKI-b19125a9-4499-3e0e-aa0c-7792401f4900"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe2O3"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe2O3"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DProtamine-2DRhodamine"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PVA"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-6da0d960-35d3-4b23-a173-f72214be91c9.json b/test/data/enm/study-NWKI-6da0d960-35d3-4b23-a173-f72214be91c9.json
deleted file mode 100644
index e838dcb..0000000
--- a/test/data/enm/study-NWKI-6da0d960-35d3-4b23-a173-f72214be91c9.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-6da0d960-35d3-4b23-a173-f72214be91c9",
- "owner": {
- "substance": {
- "uuid": "NWKI-002f5129-d46a-39c7-8f26-5626aec2174e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390.2011.587903",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 68
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-6e00aa34-24b7-4414-ab3f-01dac388cfd3.json b/test/data/enm/study-NWKI-6e00aa34-24b7-4414-ab3f-01dac388cfd3.json
deleted file mode 100644
index 5a53a15..0000000
--- a/test/data/enm/study-NWKI-6e00aa34-24b7-4414-ab3f-01dac388cfd3.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-6e00aa34-24b7-4414-ab3f-01dac388cfd3",
- "owner": {
- "substance": {
- "uuid": "NWKI-0455b6e1-5203-37bb-a98b-20460acceda1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DCY35-2DTat"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cy3.5"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cy3.5"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-6e4da6a5-c3cc-4d15-9f28-d4462792e8fa.json b/test/data/enm/study-NWKI-6e4da6a5-c3cc-4d15-9f28-d4462792e8fa.json
deleted file mode 100644
index d11aa2d..0000000
--- a/test/data/enm/study-NWKI-6e4da6a5-c3cc-4d15-9f28-d4462792e8fa.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-6e4da6a5-c3cc-4d15-9f28-d4462792e8fa",
- "owner": {
- "substance": {
- "uuid": "NWKI-6b4d33a5-b573-3dbe-9ec3-9d2a9bc42a2e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 3.37,
- "errorValue": 0.57
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-70113708-d18b-4539-93ab-b866d5a05700.json b/test/data/enm/study-NWKI-70113708-d18b-4539-93ab-b866d5a05700.json
deleted file mode 100644
index ecd3307..0000000
--- a/test/data/enm/study-NWKI-70113708-d18b-4539-93ab-b866d5a05700.json
+++ /dev/null
@@ -1,65 +0,0 @@
-{
- "uuid": "NWKI-70113708-d18b-4539-93ab-b866d5a05700",
- "owner": {
- "substance": {
- "uuid": "NWKI-895a506b-c331-3576-bf9e-cbcde5822c11"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "Serum": {
- "loValue": "sfMEM"
- },
- "pH": {
- "loValue": 7.98
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -21
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7047ec54-4363-4217-b0bf-9b8dc6816321.json b/test/data/enm/study-NWKI-7047ec54-4363-4217-b0bf-9b8dc6816321.json
deleted file mode 100644
index 8f2b390..0000000
--- a/test/data/enm/study-NWKI-7047ec54-4363-4217-b0bf-9b8dc6816321.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-7047ec54-4363-4217-b0bf-9b8dc6816321",
- "owner": {
- "substance": {
- "uuid": "NWKI-d63286d0-3205-3216-92ce-e9e2632aca9e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DPEG-2DAminoSPARK680IVM"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PEG"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PEG"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-70e8b5b5-4372-4ab2-a285-a8b623b5286e.json b/test/data/enm/study-NWKI-70e8b5b5-4372-4ab2-a285-a8b623b5286e.json
deleted file mode 100644
index 054e9b0..0000000
--- a/test/data/enm/study-NWKI-70e8b5b5-4372-4ab2-a285-a8b623b5286e.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-70e8b5b5-4372-4ab2-a285-a8b623b5286e",
- "owner": {
- "substance": {
- "uuid": "NWKI-c2ab6def-8305-3b78-958a-4657b3363e11"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -33
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-71efc69b-47a4-46f9-95cf-094d9b61ea83.json b/test/data/enm/study-NWKI-71efc69b-47a4-46f9-95cf-094d9b61ea83.json
deleted file mode 100644
index facf129..0000000
--- a/test/data/enm/study-NWKI-71efc69b-47a4-46f9-95cf-094d9b61ea83.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-71efc69b-47a4-46f9-95cf-094d9b61ea83",
- "owner": {
- "substance": {
- "uuid": "NWKI-438d1468-d5d7-3977-9dab-15a3a05add38"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002167_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002167",
- "title": "BAO_0002167 Genotoxicity Assay"
- },
- "endpoint": "DNA in Tail",
- "guideline": [
- "Fpg-2Dmodified Comet Assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Fpg-2Dmodified Comet Assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "DNA_in_Tail",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- },
- "FPG Content": {
- "loValue": 0
- }
- },
- "result": {
- "unit": "%",
- "loValue": 2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7238a946-65a9-4767-9857-e655fb3766af.json b/test/data/enm/study-NWKI-7238a946-65a9-4767-9857-e655fb3766af.json
deleted file mode 100644
index 10e5309..0000000
--- a/test/data/enm/study-NWKI-7238a946-65a9-4767-9857-e655fb3766af.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-7238a946-65a9-4767-9857-e655fb3766af",
- "owner": {
- "substance": {
- "uuid": "NWKI-52edeff5-900d-3f5a-86ba-550e9b368239"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 200,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-72aa6911-b06c-4440-96d5-9209a49aceb3.json b/test/data/enm/study-NWKI-72aa6911-b06c-4440-96d5-9209a49aceb3.json
deleted file mode 100644
index 308d63a..0000000
--- a/test/data/enm/study-NWKI-72aa6911-b06c-4440-96d5-9209a49aceb3.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-72aa6911-b06c-4440-96d5-9209a49aceb3",
- "owner": {
- "substance": {
- "uuid": "NWKI-ec00c05f-0b35-3c5a-b16f-7a3560213764"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DFTIC-2DSI"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-72d5df53-e275-429b-b016-acd988de6623.json b/test/data/enm/study-NWKI-72d5df53-e275-429b-b016-acd988de6623.json
deleted file mode 100644
index 0250ea8..0000000
--- a/test/data/enm/study-NWKI-72d5df53-e275-429b-b016-acd988de6623.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-72d5df53-e275-429b-b016-acd988de6623",
- "owner": {
- "substance": {
- "uuid": "NWKI-86b21444-5403-3e29-b117-e09ef92cca2a"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-72e8aef4-1362-43e6-a9db-e5762369bdd5.json b/test/data/enm/study-NWKI-72e8aef4-1362-43e6-a9db-e5762369bdd5.json
deleted file mode 100644
index af2ff90..0000000
--- a/test/data/enm/study-NWKI-72e8aef4-1362-43e6-a9db-e5762369bdd5.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-72e8aef4-1362-43e6-a9db-e5762369bdd5",
- "owner": {
- "substance": {
- "uuid": "NWKI-417f0133-8f2c-3255-bdcf-7d71ac295d00"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 1,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-734860bb-ab9d-468a-97a0-699ad0a6b5a6.json b/test/data/enm/study-NWKI-734860bb-ab9d-468a-97a0-699ad0a6b5a6.json
deleted file mode 100644
index 4ec8734..0000000
--- a/test/data/enm/study-NWKI-734860bb-ab9d-468a-97a0-699ad0a6b5a6.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-734860bb-ab9d-468a-97a0-699ad0a6b5a6",
- "owner": {
- "substance": {
- "uuid": "NWKI-3d8aaa66-97d9-351b-9771-691300d5e97c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 42,
- "upQualifier": "<=",
- "upValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-738ed836-1ded-475f-9c03-e0ab21241fa2.json b/test/data/enm/study-NWKI-738ed836-1ded-475f-9c03-e0ab21241fa2.json
deleted file mode 100644
index 5cdd475..0000000
--- a/test/data/enm/study-NWKI-738ed836-1ded-475f-9c03-e0ab21241fa2.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-738ed836-1ded-475f-9c03-e0ab21241fa2",
- "owner": {
- "substance": {
- "uuid": "NWKI-9a13f473-8a29-32e4-9653-ec03f5fb8923"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -11.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-73c27928-2a28-43a0-a6d6-239372d0ce63.json b/test/data/enm/study-NWKI-73c27928-2a28-43a0-a6d6-239372d0ce63.json
deleted file mode 100644
index 027dfed..0000000
--- a/test/data/enm/study-NWKI-73c27928-2a28-43a0-a6d6-239372d0ce63.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-73c27928-2a28-43a0-a6d6-239372d0ce63",
- "owner": {
- "substance": {
- "uuid": "NWKI-db562080-5286-327a-b813-6775c437385e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 38
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-73e01519-c024-4897-b01d-ce4498bf39f5.json b/test/data/enm/study-NWKI-73e01519-c024-4897-b01d-ce4498bf39f5.json
deleted file mode 100644
index 49bcc09..0000000
--- a/test/data/enm/study-NWKI-73e01519-c024-4897-b01d-ce4498bf39f5.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-73e01519-c024-4897-b01d-ce4498bf39f5",
- "owner": {
- "substance": {
- "uuid": "NWKI-8c5b9350-2c03-3173-9615-cabfbe6929c9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "LDH Release",
- "guideline": [
- "Lactate Dehydrogenase Activity"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Lactate Dehydrogenase Activity"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "LDH_Release",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 80,
- "unit": "ug/cm^2"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 70
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-747ef516-d7f4-4088-ae9b-cd7f03254766.json b/test/data/enm/study-NWKI-747ef516-d7f4-4088-ae9b-cd7f03254766.json
deleted file mode 100644
index f64d0d4..0000000
--- a/test/data/enm/study-NWKI-747ef516-d7f4-4088-ae9b-cd7f03254766.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-747ef516-d7f4-4088-ae9b-cd7f03254766",
- "owner": {
- "substance": {
- "uuid": "NWKI-566286ef-03eb-317a-8d9d-24fffefefc0b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn200546k",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 1.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-749775b3-4a3a-4e7e-9fee-422114dc700d.json b/test/data/enm/study-NWKI-749775b3-4a3a-4e7e-9fee-422114dc700d.json
deleted file mode 100644
index 50ae4dd..0000000
--- a/test/data/enm/study-NWKI-749775b3-4a3a-4e7e-9fee-422114dc700d.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-749775b3-4a3a-4e7e-9fee-422114dc700d",
- "owner": {
- "substance": {
- "uuid": "NWKI-438d1468-d5d7-3977-9dab-15a3a05add38"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "LDH Release",
- "guideline": [
- "Lactate Dehydrogenase Activity"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Lactate Dehydrogenase Activity"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "LDH_Release",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 80,
- "unit": "ug/cm^2"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-752659af-c93e-48c9-a3ba-84063d1c76d0.json b/test/data/enm/study-NWKI-752659af-c93e-48c9-a3ba-84063d1c76d0.json
deleted file mode 100644
index 69bd58a..0000000
--- a/test/data/enm/study-NWKI-752659af-c93e-48c9-a3ba-84063d1c76d0.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-752659af-c93e-48c9-a3ba-84063d1c76d0",
- "owner": {
- "substance": {
- "uuid": "NWKI-535c1a8b-71d0-3388-aaf5-e3a5c86510cb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -59.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7558ca2a-c4f0-4c5c-b6b2-e6eabf75bad5.json b/test/data/enm/study-NWKI-7558ca2a-c4f0-4c5c-b6b2-e6eabf75bad5.json
deleted file mode 100644
index 531f9a2..0000000
--- a/test/data/enm/study-NWKI-7558ca2a-c4f0-4c5c-b6b2-e6eabf75bad5.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-7558ca2a-c4f0-4c5c-b6b2-e6eabf75bad5",
- "owner": {
- "substance": {
- "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Colon HT29",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 600,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 4
- }
- },
- "result": {
- "unit": null,
- "loValue": 10
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7580b78e-f6ab-4615-89e2-ec3487c23316.json b/test/data/enm/study-NWKI-7580b78e-f6ab-4615-89e2-ec3487c23316.json
deleted file mode 100644
index b54e6b4..0000000
--- a/test/data/enm/study-NWKI-7580b78e-f6ab-4615-89e2-ec3487c23316.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-7580b78e-f6ab-4615-89e2-ec3487c23316",
- "owner": {
- "substance": {
- "uuid": "NWKI-cfea3b7c-ee39-34ef-8349-16b1e7825861"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DRhodamine-2DProtamine"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Protamine"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Protamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-75c8848d-c75a-4628-a3e6-ebdac796acf9.json b/test/data/enm/study-NWKI-75c8848d-c75a-4628-a3e6-ebdac796acf9.json
deleted file mode 100644
index b04e395..0000000
--- a/test/data/enm/study-NWKI-75c8848d-c75a-4628-a3e6-ebdac796acf9.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "uuid": "NWKI-75c8848d-c75a-4628-a3e6-ebdac796acf9",
- "owner": {
- "substance": {
- "uuid": "NWKI-566286ef-03eb-317a-8d9d-24fffefefc0b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Ag"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Ag"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "MESCoating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "MES"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "SCCS(=O)(=O)[O-].[Na+]"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "MES"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-75da2ea6-d0d3-4a13-8e26-43f82a437d8a.json b/test/data/enm/study-NWKI-75da2ea6-d0d3-4a13-8e26-43f82a437d8a.json
deleted file mode 100644
index 63a0b1d..0000000
--- a/test/data/enm/study-NWKI-75da2ea6-d0d3-4a13-8e26-43f82a437d8a.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-75da2ea6-d0d3-4a13-8e26-43f82a437d8a",
- "owner": {
- "substance": {
- "uuid": "NWKI-bb2f1a47-0260-3271-b9c3-edb850d15be9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1039/C4FD00117F",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "Å",
- "loQualifier": ">=",
- "loValue": 25,
- "upQualifier": "<=",
- "upValue": 30
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7663a389-7d00-4dca-84ce-ae8134f5c34d.json b/test/data/enm/study-NWKI-7663a389-7d00-4dca-84ce-ae8134f5c34d.json
deleted file mode 100644
index 0141053..0000000
--- a/test/data/enm/study-NWKI-7663a389-7d00-4dca-84ce-ae8134f5c34d.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-7663a389-7d00-4dca-84ce-ae8134f5c34d",
- "owner": {
- "substance": {
- "uuid": "NWKI-417f0133-8f2c-3255-bdcf-7d71ac295d00"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 10
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-768421ee-d5b3-4964-9f46-fb1cbf0afc2f.json b/test/data/enm/study-NWKI-768421ee-d5b3-4964-9f46-fb1cbf0afc2f.json
deleted file mode 100644
index 36f5389..0000000
--- a/test/data/enm/study-NWKI-768421ee-d5b3-4964-9f46-fb1cbf0afc2f.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-768421ee-d5b3-4964-9f46-fb1cbf0afc2f",
- "owner": {
- "substance": {
- "uuid": "NWKI-144a9226-4b93-36a9-ba2d-6b6c4903357b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null,
- "Serum": {
- "loValue": "PBS"
- }
- },
- "result": {
- "unit": "nm",
- "loValue": 158
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-76deec17-0c64-4888-83cd-468ed71b340d.json b/test/data/enm/study-NWKI-76deec17-0c64-4888-83cd-468ed71b340d.json
deleted file mode 100644
index b106fb7..0000000
--- a/test/data/enm/study-NWKI-76deec17-0c64-4888-83cd-468ed71b340d.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-76deec17-0c64-4888-83cd-468ed71b340d",
- "owner": {
- "substance": {
- "uuid": "NWKI-4e62b022-02b9-35e7-a653-7ee317f54ae8"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3390/ijerph110908867",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 14,
- "errorValue": 4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-76fa4f88-0375-441b-ab01-f1c1a1003c83.json b/test/data/enm/study-NWKI-76fa4f88-0375-441b-ab01-f1c1a1003c83.json
deleted file mode 100644
index b048383..0000000
--- a/test/data/enm/study-NWKI-76fa4f88-0375-441b-ab01-f1c1a1003c83.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-76fa4f88-0375-441b-ab01-f1c1a1003c83",
- "owner": {
- "substance": {
- "uuid": "NWKI-0e10a982-4c8b-3f90-af19-8cd443575fc4"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 40,
- "upQualifier": "<=",
- "upValue": 70
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-77206c3d-0288-45eb-9c5c-6f5e5245e499.json b/test/data/enm/study-NWKI-77206c3d-0288-45eb-9c5c-6f5e5245e499.json
deleted file mode 100644
index 828c348..0000000
--- a/test/data/enm/study-NWKI-77206c3d-0288-45eb-9c5c-6f5e5245e499.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-77206c3d-0288-45eb-9c5c-6f5e5245e499",
- "owner": {
- "substance": {
- "uuid": "NWKI-6ede15ea-8037-379f-933e-7b947e155c6a"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1039/C4FD00117F",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "Å",
- "loQualifier": ">=",
- "loValue": 25,
- "upQualifier": "<=",
- "upValue": 30
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7768d3c9-59f0-40c7-8c3f-0391d02d48cb.json b/test/data/enm/study-NWKI-7768d3c9-59f0-40c7-8c3f-0391d02d48cb.json
deleted file mode 100644
index f5bf837..0000000
--- a/test/data/enm/study-NWKI-7768d3c9-59f0-40c7-8c3f-0391d02d48cb.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-7768d3c9-59f0-40c7-8c3f-0391d02d48cb",
- "owner": {
- "substance": {
- "uuid": "NWKI-a03a76c5-85b2-3b10-b567-87ca006c15ac"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 11.8,
- "errorValue": 3.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-778c56be-5ec6-4032-90fe-f5d965330f71.json b/test/data/enm/study-NWKI-778c56be-5ec6-4032-90fe-f5d965330f71.json
deleted file mode 100644
index b96b9ff..0000000
--- a/test/data/enm/study-NWKI-778c56be-5ec6-4032-90fe-f5d965330f71.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-778c56be-5ec6-4032-90fe-f5d965330f71",
- "owner": {
- "substance": {
- "uuid": "NWKI-c0927a67-d21d-37e8-932d-fb1607e58aee"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002167_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002167",
- "title": "BAO_0002167 Genotoxicity Assay"
- },
- "endpoint": "DNA in Tail",
- "guideline": [
- "Fpg-2Dmodified Comet Assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Fpg-2Dmodified Comet Assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "DNA_in_Tail",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- },
- "FPG Content": {
- "loValue": 100
- }
- },
- "result": {
- "unit": "%",
- "loValue": 5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-77a0bdb0-e565-46c3-aacd-f5a21ca277ba.json b/test/data/enm/study-NWKI-77a0bdb0-e565-46c3-aacd-f5a21ca277ba.json
deleted file mode 100644
index 368da84..0000000
--- a/test/data/enm/study-NWKI-77a0bdb0-e565-46c3-aacd-f5a21ca277ba.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-77a0bdb0-e565-46c3-aacd-f5a21ca277ba",
- "owner": {
- "substance": {
- "uuid": "NWKI-11ae9232-1521-31d6-9466-c902c43d94fe"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DTatPeptide"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Tat_Peptide"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Tat_Peptide"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7805dbcb-b630-4900-85b4-f481b61a6700.json b/test/data/enm/study-NWKI-7805dbcb-b630-4900-85b4-f481b61a6700.json
deleted file mode 100644
index 65ca8ee..0000000
--- a/test/data/enm/study-NWKI-7805dbcb-b630-4900-85b4-f481b61a6700.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-7805dbcb-b630-4900-85b4-f481b61a6700",
- "owner": {
- "substance": {
- "uuid": "NWKI-239abeb4-eb11-3e6e-8301-d486e21861aa"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -54.6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-788732bb-6b81-4d0b-a592-ddcf1c28215c.json b/test/data/enm/study-NWKI-788732bb-6b81-4d0b-a592-ddcf1c28215c.json
deleted file mode 100644
index 17175b1..0000000
--- a/test/data/enm/study-NWKI-788732bb-6b81-4d0b-a592-ddcf1c28215c.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-788732bb-6b81-4d0b-a592-ddcf1c28215c",
- "owner": {
- "substance": {
- "uuid": "NWKI-7680f6c2-68d8-3ee4-b84b-8107da3f6e19"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "DextranCoating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-79239c97-8c61-42a5-b567-49225a4c097d.json b/test/data/enm/study-NWKI-79239c97-8c61-42a5-b567-49225a4c097d.json
deleted file mode 100644
index 9e17985..0000000
--- a/test/data/enm/study-NWKI-79239c97-8c61-42a5-b567-49225a4c097d.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-79239c97-8c61-42a5-b567-49225a4c097d",
- "owner": {
- "substance": {
- "uuid": "NWKI-52e8adb0-6aba-3e7f-bc0c-85cb36c394a2"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "BET",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loQualifier": ">=",
- "loValue": 300
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-79a0ef0d-c979-4cb3-b2fd-548525f90784.json b/test/data/enm/study-NWKI-79a0ef0d-c979-4cb3-b2fd-548525f90784.json
deleted file mode 100644
index 65bd843..0000000
--- a/test/data/enm/study-NWKI-79a0ef0d-c979-4cb3-b2fd-548525f90784.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-79a0ef0d-c979-4cb3-b2fd-548525f90784",
- "owner": {
- "substance": {
- "uuid": "NWKI-8c5b9350-2c03-3173-9615-cabfbe6929c9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "LDH Release",
- "guideline": [
- "Lactate Dehydrogenase Activity"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Lactate Dehydrogenase Activity"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "LDH_Release",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 35
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-79cd1b2b-5087-4093-a1bf-a35101e22425.json b/test/data/enm/study-NWKI-79cd1b2b-5087-4093-a1bf-a35101e22425.json
deleted file mode 100644
index eca698d..0000000
--- a/test/data/enm/study-NWKI-79cd1b2b-5087-4093-a1bf-a35101e22425.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-79cd1b2b-5087-4093-a1bf-a35101e22425",
- "owner": {
- "substance": {
- "uuid": "NWKI-417f0133-8f2c-3255-bdcf-7d71ac295d00"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7a9b2e95-0470-4a91-b2e3-f1190082b8ef.json b/test/data/enm/study-NWKI-7a9b2e95-0470-4a91-b2e3-f1190082b8ef.json
deleted file mode 100644
index 25db6c1..0000000
--- a/test/data/enm/study-NWKI-7a9b2e95-0470-4a91-b2e3-f1190082b8ef.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-7a9b2e95-0470-4a91-b2e3-f1190082b8ef",
- "owner": {
- "substance": {
- "uuid": "NWKI-85b50517-fdea-3aa6-abbd-dd506393aaa5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 8,
- "upQualifier": "<=",
- "upValue": 15
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7ab06dee-e576-4808-8c00-6a3085733458.json b/test/data/enm/study-NWKI-7ab06dee-e576-4808-8c00-6a3085733458.json
deleted file mode 100644
index 7ac516e..0000000
--- a/test/data/enm/study-NWKI-7ab06dee-e576-4808-8c00-6a3085733458.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-7ab06dee-e576-4808-8c00-6a3085733458",
- "owner": {
- "substance": {
- "uuid": "NWKI-205a198f-fcb8-3870-b99c-c6f252783613"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.envpol.2008.11.004",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 60
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7ad548f9-6e7a-42f8-9093-c57657cc0152.json b/test/data/enm/study-NWKI-7ad548f9-6e7a-42f8-9093-c57657cc0152.json
deleted file mode 100644
index 15df3ff..0000000
--- a/test/data/enm/study-NWKI-7ad548f9-6e7a-42f8-9093-c57657cc0152.json
+++ /dev/null
@@ -1,54 +0,0 @@
-{
- "uuid": "NWKI-7ad548f9-6e7a-42f8-9093-c57657cc0152",
- "owner": {
- "substance": {
- "uuid": "NWKI-67b71fb2-85c1-3130-bd4e-84da8bc05fc9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_BOILING_SECTION",
- "term": "http://semanticscience.org/resource/CHEMINF_000257",
- "title": "4.3 Boiling point"
- },
- "endpoint": "Boiling Point",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Boiling point",
- "conditions": {
- "Atm. Pressure": null,
- "Decomposition": null
- },
- "result": {
- "unit": "°C",
- "loValue": 2230
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7af108f2-05bc-4a05-8c0e-1c25e1df902e.json b/test/data/enm/study-NWKI-7af108f2-05bc-4a05-8c0e-1c25e1df902e.json
deleted file mode 100644
index f81f785..0000000
--- a/test/data/enm/study-NWKI-7af108f2-05bc-4a05-8c0e-1c25e1df902e.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-7af108f2-05bc-4a05-8c0e-1c25e1df902e",
- "owner": {
- "substance": {
- "uuid": "NWKI-994226ce-df01-3717-b45d-376f645a8d47"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 15,
- "upQualifier": "<=",
- "upValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7c7cc761-6167-4f01-bc70-1e227d40ee50.json b/test/data/enm/study-NWKI-7c7cc761-6167-4f01-bc70-1e227d40ee50.json
deleted file mode 100644
index f73dfd1..0000000
--- a/test/data/enm/study-NWKI-7c7cc761-6167-4f01-bc70-1e227d40ee50.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-7c7cc761-6167-4f01-bc70-1e227d40ee50",
- "owner": {
- "substance": {
- "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "TEM",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31.4,
- "errorValue": 3.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7cc65f18-bc91-4048-b73c-5de3962794a2.json b/test/data/enm/study-NWKI-7cc65f18-bc91-4048-b73c-5de3962794a2.json
deleted file mode 100644
index 22a674a..0000000
--- a/test/data/enm/study-NWKI-7cc65f18-bc91-4048-b73c-5de3962794a2.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-7cc65f18-bc91-4048-b73c-5de3962794a2",
- "owner": {
- "substance": {
- "uuid": "NWKI-3e6392b9-35fb-39ad-ad98-f6d6de37659a"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -52.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7d1bd000-b1da-4f1e-b1f3-0dc4cfb7c580.json b/test/data/enm/study-NWKI-7d1bd000-b1da-4f1e-b1f3-0dc4cfb7c580.json
deleted file mode 100644
index cbe20aa..0000000
--- a/test/data/enm/study-NWKI-7d1bd000-b1da-4f1e-b1f3-0dc4cfb7c580.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-7d1bd000-b1da-4f1e-b1f3-0dc4cfb7c580",
- "owner": {
- "substance": {
- "uuid": "NWKI-d8f70c6c-3496-3ad3-8ab3-e4f08a178d30"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": 66,
- "errorValue": 5.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7d6af12a-493d-43f2-89c0-0f4bcdf01aa2.json b/test/data/enm/study-NWKI-7d6af12a-493d-43f2-89c0-0f4bcdf01aa2.json
deleted file mode 100644
index b557ee6..0000000
--- a/test/data/enm/study-NWKI-7d6af12a-493d-43f2-89c0-0f4bcdf01aa2.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "uuid": "NWKI-7d6af12a-493d-43f2-89c0-0f4bcdf01aa2",
- "owner": {
- "substance": {
- "uuid": "NWKI-7fca9f1b-fb2a-3fa5-a080-21391413787d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Ag"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Ag"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "MEEECoating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "MEEE"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "SCCOCCOCCO"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "MEEE"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7d72e67e-e739-4b03-bd83-a64ee99ea87b.json b/test/data/enm/study-NWKI-7d72e67e-e739-4b03-bd83-a64ee99ea87b.json
deleted file mode 100644
index 448bf80..0000000
--- a/test/data/enm/study-NWKI-7d72e67e-e739-4b03-bd83-a64ee99ea87b.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-7d72e67e-e739-4b03-bd83-a64ee99ea87b",
- "owner": {
- "substance": {
- "uuid": "NWKI-fc00f3ef-464d-32d3-9d12-7e78d25db6ce"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 4.98,
- "errorValue": 0.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7daf91aa-55cd-4134-823f-507d470782dd.json b/test/data/enm/study-NWKI-7daf91aa-55cd-4134-823f-507d470782dd.json
deleted file mode 100644
index 2e6a2f2..0000000
--- a/test/data/enm/study-NWKI-7daf91aa-55cd-4134-823f-507d470782dd.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-7daf91aa-55cd-4134-823f-507d470782dd",
- "owner": {
- "substance": {
- "uuid": "NWKI-674cfd7c-bc77-36c7-bbe0-d52dd0233d64"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1080/10934520600966177",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "Shape",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Primarily gamma phase"
- },
- "effects": [
- {
- "endpoint": "SHAPE",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": null,
- "textValue": "Primarily gamma phase"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7dcedd15-3194-4b36-980e-ccf0d9f9cd64.json b/test/data/enm/study-NWKI-7dcedd15-3194-4b36-980e-ccf0d9f9cd64.json
deleted file mode 100644
index 3e0dce6..0000000
--- a/test/data/enm/study-NWKI-7dcedd15-3194-4b36-980e-ccf0d9f9cd64.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-7dcedd15-3194-4b36-980e-ccf0d9f9cd64",
- "owner": {
- "substance": {
- "uuid": "NWKI-e93a9eb3-83df-3522-b417-7b3a379054a6"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Average Length",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Average Length",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "μm",
- "loValue": 1.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7e127b23-d54f-4fb6-aecf-3a3d2c3ca482.json b/test/data/enm/study-NWKI-7e127b23-d54f-4fb6-aecf-3a3d2c3ca482.json
deleted file mode 100644
index f732bc0..0000000
--- a/test/data/enm/study-NWKI-7e127b23-d54f-4fb6-aecf-3a3d2c3ca482.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-7e127b23-d54f-4fb6-aecf-3a3d2c3ca482",
- "owner": {
- "substance": {
- "uuid": "NWKI-8667bfb7-a5da-3eb0-b9d7-86e2c8f06f19"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -58
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7e264886-37ae-4a67-aeb4-f7050badc42f.json b/test/data/enm/study-NWKI-7e264886-37ae-4a67-aeb4-f7050badc42f.json
deleted file mode 100644
index f93dd1f..0000000
--- a/test/data/enm/study-NWKI-7e264886-37ae-4a67-aeb4-f7050badc42f.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-7e264886-37ae-4a67-aeb4-f7050badc42f",
- "owner": {
- "substance": {
- "uuid": "NWKI-c4c91023-5b41-3d6d-bb4f-ee1152926be0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 3000,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 35
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7e2e36fe-303f-4576-a1e8-ffcee6b3ee4a.json b/test/data/enm/study-NWKI-7e2e36fe-303f-4576-a1e8-ffcee6b3ee4a.json
deleted file mode 100644
index fb72df9..0000000
--- a/test/data/enm/study-NWKI-7e2e36fe-303f-4576-a1e8-ffcee6b3ee4a.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-7e2e36fe-303f-4576-a1e8-ffcee6b3ee4a",
- "owner": {
- "substance": {
- "uuid": "NWKI-3481f716-18fa-39b3-aa54-4acb67877194"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -9.08
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7f5e6119-a6a6-42ee-8b17-260f67461566.json b/test/data/enm/study-NWKI-7f5e6119-a6a6-42ee-8b17-260f67461566.json
deleted file mode 100644
index c340b81..0000000
--- a/test/data/enm/study-NWKI-7f5e6119-a6a6-42ee-8b17-260f67461566.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-7f5e6119-a6a6-42ee-8b17-260f67461566",
- "owner": {
- "substance": {
- "uuid": "NWKI-47d254de-8242-3374-9ed3-085227d473cc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DPEG-2DED-2DAminoSPARK680"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PVA"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7f8d8e04-e3c9-4ea4-9df4-7b57920649f6.json b/test/data/enm/study-NWKI-7f8d8e04-e3c9-4ea4-9df4-7b57920649f6.json
deleted file mode 100644
index 279fb44..0000000
--- a/test/data/enm/study-NWKI-7f8d8e04-e3c9-4ea4-9df4-7b57920649f6.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-7f8d8e04-e3c9-4ea4-9df4-7b57920649f6",
- "owner": {
- "substance": {
- "uuid": "NWKI-3bbccc84-019f-369f-ba70-490fcfde4423"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.01
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7f9c80a3-8113-4697-9c9f-6501b9101571.json b/test/data/enm/study-NWKI-7f9c80a3-8113-4697-9c9f-6501b9101571.json
deleted file mode 100644
index a85130e..0000000
--- a/test/data/enm/study-NWKI-7f9c80a3-8113-4697-9c9f-6501b9101571.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-7f9c80a3-8113-4697-9c9f-6501b9101571",
- "owner": {
- "substance": {
- "uuid": "NWKI-8f43d9fb-94ae-3d2b-8bb6-e8eb060e3b1b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": 120
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7fd4ed19-440a-4c19-9563-9e54b040dee8.json b/test/data/enm/study-NWKI-7fd4ed19-440a-4c19-9563-9e54b040dee8.json
deleted file mode 100644
index e59f2d9..0000000
--- a/test/data/enm/study-NWKI-7fd4ed19-440a-4c19-9563-9e54b040dee8.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-7fd4ed19-440a-4c19-9563-9e54b040dee8",
- "owner": {
- "substance": {
- "uuid": "NWKI-417f0133-8f2c-3255-bdcf-7d71ac295d00"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 10,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-7fe22f1d-e036-445c-8c61-46ab914871c6.json b/test/data/enm/study-NWKI-7fe22f1d-e036-445c-8c61-46ab914871c6.json
deleted file mode 100644
index 8f24990..0000000
--- a/test/data/enm/study-NWKI-7fe22f1d-e036-445c-8c61-46ab914871c6.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-7fe22f1d-e036-445c-8c61-46ab914871c6",
- "owner": {
- "substance": {
- "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Colon HT29",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 6,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 8
- }
- },
- "result": {
- "unit": null,
- "loValue": 100
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-81088c1d-747c-46a8-b3e7-5559d15ead7c.json b/test/data/enm/study-NWKI-81088c1d-747c-46a8-b3e7-5559d15ead7c.json
deleted file mode 100644
index d6d65e2..0000000
--- a/test/data/enm/study-NWKI-81088c1d-747c-46a8-b3e7-5559d15ead7c.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-81088c1d-747c-46a8-b3e7-5559d15ead7c",
- "owner": {
- "substance": {
- "uuid": "NWKI-8c5b9350-2c03-3173-9615-cabfbe6929c9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Metabolic Activity",
- "guideline": [
- "Tetrazolium Salt Cleavage"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Tetrazolium Salt Cleavage"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Metabolic_Activity",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 80,
- "unit": "ug/cm^2"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-81217635-d689-47e3-ac04-edd53506bff8.json b/test/data/enm/study-NWKI-81217635-d689-47e3-ac04-edd53506bff8.json
deleted file mode 100644
index aac5298..0000000
--- a/test/data/enm/study-NWKI-81217635-d689-47e3-ac04-edd53506bff8.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-81217635-d689-47e3-ac04-edd53506bff8",
- "owner": {
- "substance": {
- "uuid": "NWKI-4e62b022-02b9-35e7-a653-7ee317f54ae8"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3390/ijerph110908867",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "TEM",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 9,
- "errorValue": 3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-81278690-b827-4d5b-8c54-092a3c1c354a.json b/test/data/enm/study-NWKI-81278690-b827-4d5b-8c54-092a3c1c354a.json
deleted file mode 100644
index 95dba0c..0000000
--- a/test/data/enm/study-NWKI-81278690-b827-4d5b-8c54-092a3c1c354a.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-81278690-b827-4d5b-8c54-092a3c1c354a",
- "owner": {
- "substance": {
- "uuid": "NWKI-812e122b-8bee-350d-8aea-aaaa88ce84dd"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 25,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-81546ced-dc22-4cb5-8737-19aa4ad1de93.json b/test/data/enm/study-NWKI-81546ced-dc22-4cb5-8737-19aa4ad1de93.json
deleted file mode 100644
index e5f4e5e..0000000
--- a/test/data/enm/study-NWKI-81546ced-dc22-4cb5-8737-19aa4ad1de93.json
+++ /dev/null
@@ -1,54 +0,0 @@
-{
- "uuid": "NWKI-81546ced-dc22-4cb5-8737-19aa4ad1de93",
- "owner": {
- "substance": {
- "uuid": "NWKI-6e6a5fec-23c2-3fff-8522-a22689091196"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_BOILING_SECTION",
- "term": "http://semanticscience.org/resource/CHEMINF_000257",
- "title": "4.3 Boiling point"
- },
- "endpoint": "Boiling Point",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Boiling point",
- "conditions": {
- "Atm. Pressure": null,
- "Decomposition": null
- },
- "result": {
- "unit": "°C",
- "loValue": 2230
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-81fdf4e1-b6a9-4129-9d10-7c001906557a.json b/test/data/enm/study-NWKI-81fdf4e1-b6a9-4129-9d10-7c001906557a.json
deleted file mode 100644
index b08cbd0..0000000
--- a/test/data/enm/study-NWKI-81fdf4e1-b6a9-4129-9d10-7c001906557a.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-81fdf4e1-b6a9-4129-9d10-7c001906557a",
- "owner": {
- "substance": {
- "uuid": "NWKI-05ce8604-4efc-376b-a88f-338a90465243"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390.2015.1017022",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Average Length",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Average Length",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "μm",
- "loValue": 5.7,
- "errorValue": 3.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-825f394c-e93a-4520-a6b4-cd40458ab3a7.json b/test/data/enm/study-NWKI-825f394c-e93a-4520-a6b4-cd40458ab3a7.json
deleted file mode 100644
index 02885eb..0000000
--- a/test/data/enm/study-NWKI-825f394c-e93a-4520-a6b4-cd40458ab3a7.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-825f394c-e93a-4520-a6b4-cd40458ab3a7",
- "owner": {
- "substance": {
- "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 6,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 24
- }
- },
- "result": {
- "unit": null,
- "loValue": 95
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-826c8eb7-0eac-4b4f-bfc3-085855091704.json b/test/data/enm/study-NWKI-826c8eb7-0eac-4b4f-bfc3-085855091704.json
deleted file mode 100644
index 6154b5d..0000000
--- a/test/data/enm/study-NWKI-826c8eb7-0eac-4b4f-bfc3-085855091704.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-826c8eb7-0eac-4b4f-bfc3-085855091704",
- "owner": {
- "substance": {
- "uuid": "NWKI-758c06ae-dc1f-3cbe-a409-91d14e5113d1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8271ac6a-e858-4db5-b391-bd29e949631f.json b/test/data/enm/study-NWKI-8271ac6a-e858-4db5-b391-bd29e949631f.json
deleted file mode 100644
index 652fdb1..0000000
--- a/test/data/enm/study-NWKI-8271ac6a-e858-4db5-b391-bd29e949631f.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-8271ac6a-e858-4db5-b391-bd29e949631f",
- "owner": {
- "substance": {
- "uuid": "NWKI-4551e0f7-e515-3cdb-a099-c2b99b04883d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 3.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-827ec00c-a596-4f38-b9ad-08f943876e31.json b/test/data/enm/study-NWKI-827ec00c-a596-4f38-b9ad-08f943876e31.json
deleted file mode 100644
index 5d9af52..0000000
--- a/test/data/enm/study-NWKI-827ec00c-a596-4f38-b9ad-08f943876e31.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-827ec00c-a596-4f38-b9ad-08f943876e31",
- "owner": {
- "substance": {
- "uuid": "NWKI-7fca9f1b-fb2a-3fa5-a080-21391413787d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn200546k",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 1.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-828e1658-5bdd-445f-bbfe-458a9abf7c30.json b/test/data/enm/study-NWKI-828e1658-5bdd-445f-bbfe-458a9abf7c30.json
deleted file mode 100644
index af0972d..0000000
--- a/test/data/enm/study-NWKI-828e1658-5bdd-445f-bbfe-458a9abf7c30.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-828e1658-5bdd-445f-bbfe-458a9abf7c30",
- "owner": {
- "substance": {
- "uuid": "NWKI-3db8eb74-b206-31ad-8c1b-3569703c47cb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 6,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 24
- }
- },
- "result": {
- "unit": null,
- "loValue": 95
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-82d881e8-7cd5-4a89-9c16-51987673aad2.json b/test/data/enm/study-NWKI-82d881e8-7cd5-4a89-9c16-51987673aad2.json
deleted file mode 100644
index 00990e9..0000000
--- a/test/data/enm/study-NWKI-82d881e8-7cd5-4a89-9c16-51987673aad2.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-82d881e8-7cd5-4a89-9c16-51987673aad2",
- "owner": {
- "substance": {
- "uuid": "NWKI-f6f54a71-9459-397b-b0f7-b27538cff042"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 10.7,
- "errorValue": 0.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-82ed7739-5461-4950-8043-2cad14dd4a4a.json b/test/data/enm/study-NWKI-82ed7739-5461-4950-8043-2cad14dd4a4a.json
deleted file mode 100644
index 2d1d067..0000000
--- a/test/data/enm/study-NWKI-82ed7739-5461-4950-8043-2cad14dd4a4a.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-82ed7739-5461-4950-8043-2cad14dd4a4a",
- "owner": {
- "substance": {
- "uuid": "NWKI-4832de65-5a92-3849-8061-729a2d83017e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8418de03-f2af-4c3f-821a-6f6420a4d1a2.json b/test/data/enm/study-NWKI-8418de03-f2af-4c3f-821a-6f6420a4d1a2.json
deleted file mode 100644
index 0f8f646..0000000
--- a/test/data/enm/study-NWKI-8418de03-f2af-4c3f-821a-6f6420a4d1a2.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-8418de03-f2af-4c3f-821a-6f6420a4d1a2",
- "owner": {
- "substance": {
- "uuid": "NWKI-2e056907-7ac9-3b13-a599-ee10f2548d78"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1107/S0108768105030570",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 11,
- "errorValue": 2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-846ab593-674b-4f4b-9012-257e7bfa77fe.json b/test/data/enm/study-NWKI-846ab593-674b-4f4b-9012-257e7bfa77fe.json
deleted file mode 100644
index b0299b0..0000000
--- a/test/data/enm/study-NWKI-846ab593-674b-4f4b-9012-257e7bfa77fe.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-846ab593-674b-4f4b-9012-257e7bfa77fe",
- "owner": {
- "substance": {
- "uuid": "NWKI-c4c91023-5b41-3d6d-bb4f-ee1152926be0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 500,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 69
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-854d40ae-447a-4eaa-99bc-1e08310325ea.json b/test/data/enm/study-NWKI-854d40ae-447a-4eaa-99bc-1e08310325ea.json
deleted file mode 100644
index 55589c1..0000000
--- a/test/data/enm/study-NWKI-854d40ae-447a-4eaa-99bc-1e08310325ea.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-854d40ae-447a-4eaa-99bc-1e08310325ea",
- "owner": {
- "substance": {
- "uuid": "NWKI-9a41ca03-303d-3116-89fb-2335cc1bad2d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 250
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-85588bf6-8956-4f51-84e8-96a3d38ea4ce.json b/test/data/enm/study-NWKI-85588bf6-8956-4f51-84e8-96a3d38ea4ce.json
deleted file mode 100644
index 6f46533..0000000
--- a/test/data/enm/study-NWKI-85588bf6-8956-4f51-84e8-96a3d38ea4ce.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-85588bf6-8956-4f51-84e8-96a3d38ea4ce",
- "owner": {
- "substance": {
- "uuid": "NWKI-db562080-5286-327a-b813-6775c437385e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DFITC-2DRCOOH"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-86218576-1edf-4bb7-9778-f931ffe7cff1.json b/test/data/enm/study-NWKI-86218576-1edf-4bb7-9778-f931ffe7cff1.json
deleted file mode 100644
index 660c7c5..0000000
--- a/test/data/enm/study-NWKI-86218576-1edf-4bb7-9778-f931ffe7cff1.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "uuid": "NWKI-86218576-1edf-4bb7-9778-f931ffe7cff1",
- "owner": {
- "substance": {
- "uuid": "NWKI-758c06ae-dc1f-3cbe-a409-91d14e5113d1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe2O3"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe2O3"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DED-2DVT750"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Ethylene_Diamine"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "NCCN"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Ethylene_Diamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-864c1767-bf3b-400e-8c1e-9fee4a997f6f.json b/test/data/enm/study-NWKI-864c1767-bf3b-400e-8c1e-9fee4a997f6f.json
deleted file mode 100644
index 86171a2..0000000
--- a/test/data/enm/study-NWKI-864c1767-bf3b-400e-8c1e-9fee4a997f6f.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-864c1767-bf3b-400e-8c1e-9fee4a997f6f",
- "owner": {
- "substance": {
- "uuid": "NWKI-04887adf-9687-3699-8054-e7e3f695e6db"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Mean Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 15
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-868e0d65-60b4-4614-85ed-8c2d7e5590cc.json b/test/data/enm/study-NWKI-868e0d65-60b4-4614-85ed-8c2d7e5590cc.json
deleted file mode 100644
index 990d938..0000000
--- a/test/data/enm/study-NWKI-868e0d65-60b4-4614-85ed-8c2d7e5590cc.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-868e0d65-60b4-4614-85ed-8c2d7e5590cc",
- "owner": {
- "substance": {
- "uuid": "NWKI-5a6518a3-ff8d-374b-a070-92a1addafdd7"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 59.6,
- "errorValue": 19
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-86f24136-cad3-4ddc-bac0-b0bb2eebe856.json b/test/data/enm/study-NWKI-86f24136-cad3-4ddc-bac0-b0bb2eebe856.json
deleted file mode 100644
index a7800b5..0000000
--- a/test/data/enm/study-NWKI-86f24136-cad3-4ddc-bac0-b0bb2eebe856.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-86f24136-cad3-4ddc-bac0-b0bb2eebe856",
- "owner": {
- "substance": {
- "uuid": "NWKI-7998492c-3902-3cc2-9f92-cdfae53cfc02"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es051043o",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 20,
- "upQualifier": "<=",
- "upValue": 50
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8744a8f8-25a3-47c6-94d7-498c06c99f4d.json b/test/data/enm/study-NWKI-8744a8f8-25a3-47c6-94d7-498c06c99f4d.json
deleted file mode 100644
index 1e7e4e0..0000000
--- a/test/data/enm/study-NWKI-8744a8f8-25a3-47c6-94d7-498c06c99f4d.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-8744a8f8-25a3-47c6-94d7-498c06c99f4d",
- "owner": {
- "substance": {
- "uuid": "NWKI-8667bfb7-a5da-3eb0-b9d7-86e2c8f06f19"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 6,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 24
- }
- },
- "result": {
- "unit": null,
- "loValue": 95
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-875567d3-6661-4f7e-82ff-e95d8dcea8bf.json b/test/data/enm/study-NWKI-875567d3-6661-4f7e-82ff-e95d8dcea8bf.json
deleted file mode 100644
index 23feed6..0000000
--- a/test/data/enm/study-NWKI-875567d3-6661-4f7e-82ff-e95d8dcea8bf.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-875567d3-6661-4f7e-82ff-e95d8dcea8bf",
- "owner": {
- "substance": {
- "uuid": "NWKI-694f4202-c0ba-3ed9-a0f3-0a5ccba9e9c1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Mean Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 137
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-876f5e02-52db-4875-bc48-276f952c83b3.json b/test/data/enm/study-NWKI-876f5e02-52db-4875-bc48-276f952c83b3.json
deleted file mode 100644
index f8a8e89..0000000
--- a/test/data/enm/study-NWKI-876f5e02-52db-4875-bc48-276f952c83b3.json
+++ /dev/null
@@ -1,52 +0,0 @@
-{
- "uuid": "NWKI-876f5e02-52db-4875-bc48-276f952c83b3",
- "owner": {
- "substance": {
- "uuid": "NWKI-e93603a1-8e0d-372a-8acf-48533b86ecb5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es051043o",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002993_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002993",
- "title": "BAO_0002993 Cytotoxicity Assay"
- },
- "endpoint": "Concentration in cell",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Concentration_in_cell",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 45
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-87933ab9-91b3-4290-b570-6b478504bd26.json b/test/data/enm/study-NWKI-87933ab9-91b3-4290-b570-6b478504bd26.json
deleted file mode 100644
index 81d30f4..0000000
--- a/test/data/enm/study-NWKI-87933ab9-91b3-4290-b570-6b478504bd26.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-87933ab9-91b3-4290-b570-6b478504bd26",
- "owner": {
- "substance": {
- "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Colon HT29",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 600,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 24
- }
- },
- "result": {
- "unit": null,
- "loValue": 3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-879cace7-705a-4cc6-a1ac-db71577547e7.json b/test/data/enm/study-NWKI-879cace7-705a-4cc6-a1ac-db71577547e7.json
deleted file mode 100644
index b589dfe..0000000
--- a/test/data/enm/study-NWKI-879cace7-705a-4cc6-a1ac-db71577547e7.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-879cace7-705a-4cc6-a1ac-db71577547e7",
- "owner": {
- "substance": {
- "uuid": "NWKI-52e8adb0-6aba-3e7f-bc0c-85cb36c394a2"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 0.0,
- "upQualifier": "<=",
- "upValue": 10
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-87c16072-a28c-4369-947b-434dc7c94927.json b/test/data/enm/study-NWKI-87c16072-a28c-4369-947b-434dc7c94927.json
deleted file mode 100644
index 1734352..0000000
--- a/test/data/enm/study-NWKI-87c16072-a28c-4369-947b-434dc7c94927.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-87c16072-a28c-4369-947b-434dc7c94927",
- "owner": {
- "substance": {
- "uuid": "NWKI-f9f316e8-e8a9-37f9-877f-86519b3af20e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DFITC-2DProtamine"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Protamine"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Protamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-884fb0d7-c429-49d6-ba3a-904e1fa119e2.json b/test/data/enm/study-NWKI-884fb0d7-c429-49d6-ba3a-904e1fa119e2.json
deleted file mode 100644
index b8d1c5d..0000000
--- a/test/data/enm/study-NWKI-884fb0d7-c429-49d6-ba3a-904e1fa119e2.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-884fb0d7-c429-49d6-ba3a-904e1fa119e2",
- "owner": {
- "substance": {
- "uuid": "NWKI-d8f70c6c-3496-3ad3-8ab3-e4f08a178d30"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 100,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 91
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-88797747-443e-44b0-90a0-ba8ffcf9365a.json b/test/data/enm/study-NWKI-88797747-443e-44b0-90a0-ba8ffcf9365a.json
deleted file mode 100644
index c0e9684..0000000
--- a/test/data/enm/study-NWKI-88797747-443e-44b0-90a0-ba8ffcf9365a.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-88797747-443e-44b0-90a0-ba8ffcf9365a",
- "owner": {
- "substance": {
- "uuid": "NWKI-97103918-5eeb-36a3-9981-3aa6dcef5d4c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 5,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8888d86f-a6b7-4cd4-a7b0-e650efad27da.json b/test/data/enm/study-NWKI-8888d86f-a6b7-4cd4-a7b0-e650efad27da.json
deleted file mode 100644
index 491a843..0000000
--- a/test/data/enm/study-NWKI-8888d86f-a6b7-4cd4-a7b0-e650efad27da.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-8888d86f-a6b7-4cd4-a7b0-e650efad27da",
- "owner": {
- "substance": {
- "uuid": "NWKI-a2d5a729-4ed1-3f1b-a5fd-3bd090a48aa5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn301622h",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "TEM",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 190,
- "errorValue": 9
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-88a68961-fb9d-4409-89aa-295d10bf63b2.json b/test/data/enm/study-NWKI-88a68961-fb9d-4409-89aa-295d10bf63b2.json
deleted file mode 100644
index dbbdafb..0000000
--- a/test/data/enm/study-NWKI-88a68961-fb9d-4409-89aa-295d10bf63b2.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-88a68961-fb9d-4409-89aa-295d10bf63b2",
- "owner": {
- "substance": {
- "uuid": "NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 150,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-88ebd7b5-2689-4ac1-86cc-b8b790bd5f9a.json b/test/data/enm/study-NWKI-88ebd7b5-2689-4ac1-86cc-b8b790bd5f9a.json
deleted file mode 100644
index 7f98e3d..0000000
--- a/test/data/enm/study-NWKI-88ebd7b5-2689-4ac1-86cc-b8b790bd5f9a.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-88ebd7b5-2689-4ac1-86cc-b8b790bd5f9a",
- "owner": {
- "substance": {
- "uuid": "NWKI-52edeff5-900d-3f5a-86ba-550e9b368239"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 150,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-88eea7d0-463b-4ffb-aeef-8b27912f66a7.json b/test/data/enm/study-NWKI-88eea7d0-463b-4ffb-aeef-8b27912f66a7.json
deleted file mode 100644
index 6d121d5..0000000
--- a/test/data/enm/study-NWKI-88eea7d0-463b-4ffb-aeef-8b27912f66a7.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-88eea7d0-463b-4ffb-aeef-8b27912f66a7",
- "owner": {
- "substance": {
- "uuid": "NWKI-2a046d54-ea47-31b2-a370-e886e5a0a6bb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 33
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-88f9ff3b-4ff7-4ddd-b0c9-de797a65170a.json b/test/data/enm/study-NWKI-88f9ff3b-4ff7-4ddd-b0c9-de797a65170a.json
deleted file mode 100644
index dccdebf..0000000
--- a/test/data/enm/study-NWKI-88f9ff3b-4ff7-4ddd-b0c9-de797a65170a.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-88f9ff3b-4ff7-4ddd-b0c9-de797a65170a",
- "owner": {
- "substance": {
- "uuid": "NWKI-7a8cde87-8021-3d12-9dfe-f408dfe81a74"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/tx800289z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 21
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8928ffc5-2b1c-42a8-9534-89ba4d50c54d.json b/test/data/enm/study-NWKI-8928ffc5-2b1c-42a8-9534-89ba4d50c54d.json
deleted file mode 100644
index 0f3a14a..0000000
--- a/test/data/enm/study-NWKI-8928ffc5-2b1c-42a8-9534-89ba4d50c54d.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-8928ffc5-2b1c-42a8-9534-89ba4d50c54d",
- "owner": {
- "substance": {
- "uuid": "NWKI-17c74ed1-b289-3ca1-8477-390a588cb28c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8955d52a-7973-44c8-be98-9b43bb1e135b.json b/test/data/enm/study-NWKI-8955d52a-7973-44c8-be98-9b43bb1e135b.json
deleted file mode 100644
index c805764..0000000
--- a/test/data/enm/study-NWKI-8955d52a-7973-44c8-be98-9b43bb1e135b.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-8955d52a-7973-44c8-be98-9b43bb1e135b",
- "owner": {
- "substance": {
- "uuid": "NWKI-f926951f-587c-3206-88c9-bd92614da153"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 193,
- "errorValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-89883f1b-15a0-4ec6-9b78-095a087de0f1.json b/test/data/enm/study-NWKI-89883f1b-15a0-4ec6-9b78-095a087de0f1.json
deleted file mode 100644
index 21cb73b..0000000
--- a/test/data/enm/study-NWKI-89883f1b-15a0-4ec6-9b78-095a087de0f1.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "NWKI-89883f1b-15a0-4ec6-9b78-095a087de0f1",
- "owner": {
- "substance": {
- "uuid": "NWKI-8a4b3e23-3327-3421-b20a-2e71939b44b1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DFITC-2DGlutamicAcid"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Glutamic_Acid"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "C(CC(=O)O)C(C(=O)O)N"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Glutamic_Acid"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-89c9d590-26e4-4f2d-8439-4bf6c76f7558.json b/test/data/enm/study-NWKI-89c9d590-26e4-4f2d-8439-4bf6c76f7558.json
deleted file mode 100644
index ba291b0..0000000
--- a/test/data/enm/study-NWKI-89c9d590-26e4-4f2d-8439-4bf6c76f7558.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-89c9d590-26e4-4f2d-8439-4bf6c76f7558",
- "owner": {
- "substance": {
- "uuid": "NWKI-85b50517-fdea-3aa6-abbd-dd506393aaa5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 144
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-89e3d898-31aa-4719-8579-7c93dde6274e.json b/test/data/enm/study-NWKI-89e3d898-31aa-4719-8579-7c93dde6274e.json
deleted file mode 100644
index ba96883..0000000
--- a/test/data/enm/study-NWKI-89e3d898-31aa-4719-8579-7c93dde6274e.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-89e3d898-31aa-4719-8579-7c93dde6274e",
- "owner": {
- "substance": {
- "uuid": "NWKI-8196e92b-c46d-3c14-9410-e87992810710"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -3.77
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8a80359b-2827-4800-a2ca-fcb5571c0300.json b/test/data/enm/study-NWKI-8a80359b-2827-4800-a2ca-fcb5571c0300.json
deleted file mode 100644
index 07a993c..0000000
--- a/test/data/enm/study-NWKI-8a80359b-2827-4800-a2ca-fcb5571c0300.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-8a80359b-2827-4800-a2ca-fcb5571c0300",
- "owner": {
- "substance": {
- "uuid": "NWKI-47d254de-8242-3374-9ed3-085227d473cc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -4.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8b3ff259-2009-44f5-9480-f00cb9ae69c8.json b/test/data/enm/study-NWKI-8b3ff259-2009-44f5-9480-f00cb9ae69c8.json
deleted file mode 100644
index 089520d..0000000
--- a/test/data/enm/study-NWKI-8b3ff259-2009-44f5-9480-f00cb9ae69c8.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-8b3ff259-2009-44f5-9480-f00cb9ae69c8",
- "owner": {
- "substance": {
- "uuid": "NWKI-845bf8fc-788d-38f2-be58-030f27c0d337"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 15,
- "upQualifier": "<=",
- "upValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8b87c7de-7545-494f-a082-c16729a18b4f.json b/test/data/enm/study-NWKI-8b87c7de-7545-494f-a082-c16729a18b4f.json
deleted file mode 100644
index 6c286ca..0000000
--- a/test/data/enm/study-NWKI-8b87c7de-7545-494f-a082-c16729a18b4f.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-8b87c7de-7545-494f-a082-c16729a18b4f",
- "owner": {
- "substance": {
- "uuid": "NWKI-0455b6e1-5203-37bb-a98b-20460acceda1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": 3.64
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8b8dfa72-0284-415c-b50c-22b3a8a9b839.json b/test/data/enm/study-NWKI-8b8dfa72-0284-415c-b50c-22b3a8a9b839.json
deleted file mode 100644
index 957e68c..0000000
--- a/test/data/enm/study-NWKI-8b8dfa72-0284-415c-b50c-22b3a8a9b839.json
+++ /dev/null
@@ -1,65 +0,0 @@
-{
- "uuid": "NWKI-8b8dfa72-0284-415c-b50c-22b3a8a9b839",
- "owner": {
- "substance": {
- "uuid": "NWKI-4358aa69-dec1-387a-b7ea-2238198ccdff"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "Serum": {
- "loValue": "PBS"
- },
- "pH": {
- "loValue": 7.15
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -27
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8bb3beb0-5e80-4bfe-85ac-99b7aceebcad.json b/test/data/enm/study-NWKI-8bb3beb0-5e80-4bfe-85ac-99b7aceebcad.json
deleted file mode 100644
index 4d6133e..0000000
--- a/test/data/enm/study-NWKI-8bb3beb0-5e80-4bfe-85ac-99b7aceebcad.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-8bb3beb0-5e80-4bfe-85ac-99b7aceebcad",
- "owner": {
- "substance": {
- "uuid": "NWKI-ae0be5b8-266b-3b6a-825d-55f14b51cc99"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8bbc6716-d975-4f0c-afae-60dab49a06cc.json b/test/data/enm/study-NWKI-8bbc6716-d975-4f0c-afae-60dab49a06cc.json
deleted file mode 100644
index 53846d8..0000000
--- a/test/data/enm/study-NWKI-8bbc6716-d975-4f0c-afae-60dab49a06cc.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-8bbc6716-d975-4f0c-afae-60dab49a06cc",
- "owner": {
- "substance": {
- "uuid": "NWKI-4358aa69-dec1-387a-b7ea-2238198ccdff"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null,
- "Serum": {
- "loValue": "sfMEM"
- }
- },
- "result": {
- "unit": "nm",
- "loValue": 106
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8c25ade1-6431-4040-a52d-cb234978487e.json b/test/data/enm/study-NWKI-8c25ade1-6431-4040-a52d-cb234978487e.json
deleted file mode 100644
index 12a5336..0000000
--- a/test/data/enm/study-NWKI-8c25ade1-6431-4040-a52d-cb234978487e.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-8c25ade1-6431-4040-a52d-cb234978487e",
- "owner": {
- "substance": {
- "uuid": "NWKI-afc33b0f-f6ce-3c1b-8a3d-cede13515323"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -7.15
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8d2443b8-7a23-4c59-988b-fd99323e4e37.json b/test/data/enm/study-NWKI-8d2443b8-7a23-4c59-988b-fd99323e4e37.json
deleted file mode 100644
index 891b834..0000000
--- a/test/data/enm/study-NWKI-8d2443b8-7a23-4c59-988b-fd99323e4e37.json
+++ /dev/null
@@ -1,54 +0,0 @@
-{
- "uuid": "NWKI-8d2443b8-7a23-4c59-988b-fd99323e4e37",
- "owner": {
- "substance": {
- "uuid": "NWKI-ea48c37d-840a-30d2-9740-1198a7e2c3b6"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_BOILING_SECTION",
- "term": "http://semanticscience.org/resource/CHEMINF_000257",
- "title": "4.3 Boiling point"
- },
- "endpoint": "Boiling Point",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Boiling point",
- "conditions": {
- "Atm. Pressure": null,
- "Decomposition": null
- },
- "result": {
- "unit": "Celsius",
- "loValue": 2230
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8d772138-7e9c-4e23-a9ad-844af1713aa0.json b/test/data/enm/study-NWKI-8d772138-7e9c-4e23-a9ad-844af1713aa0.json
deleted file mode 100644
index 6b1c072..0000000
--- a/test/data/enm/study-NWKI-8d772138-7e9c-4e23-a9ad-844af1713aa0.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-8d772138-7e9c-4e23-a9ad-844af1713aa0",
- "owner": {
- "substance": {
- "uuid": "NWKI-8c5b9350-2c03-3173-9615-cabfbe6929c9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002167_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002167",
- "title": "BAO_0002167 Genotoxicity Assay"
- },
- "endpoint": "DNA in Tail",
- "guideline": [
- "Fpg-2Dmodified Comet Assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Fpg-2Dmodified Comet Assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "DNA_in_Tail",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- },
- "FPG Content": {
- "loValue": 0
- }
- },
- "result": {
- "unit": "%",
- "loValue": 5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8db075a8-2314-4897-8bd6-c0afa961884e.json b/test/data/enm/study-NWKI-8db075a8-2314-4897-8bd6-c0afa961884e.json
deleted file mode 100644
index f5d65d0..0000000
--- a/test/data/enm/study-NWKI-8db075a8-2314-4897-8bd6-c0afa961884e.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-8db075a8-2314-4897-8bd6-c0afa961884e",
- "owner": {
- "substance": {
- "uuid": "NWKI-7998492c-3902-3cc2-9f92-cdfae53cfc02"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es051043o",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002993_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002993",
- "title": "BAO_0002993 Cytotoxicity Assay"
- },
- "endpoint": "Concentration in cell",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Concentration_in_cell",
- "conditions": {
- "Concentration in culture medium": {
- "loValue": 100,
- "unit": "ng/g"
- },
- "Time": {
- "loValue": 10,
- "unit": "m"
- }
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8ddf2a3a-2988-4255-8188-0c48855e7f58.json b/test/data/enm/study-NWKI-8ddf2a3a-2988-4255-8188-0c48855e7f58.json
deleted file mode 100644
index fc01475..0000000
--- a/test/data/enm/study-NWKI-8ddf2a3a-2988-4255-8188-0c48855e7f58.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-8ddf2a3a-2988-4255-8188-0c48855e7f58",
- "owner": {
- "substance": {
- "uuid": "NWKI-f40bfb8a-1280-35a2-866c-42b5a3ce13e7"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.64
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8dfaf1c8-d49d-4280-ab04-6f55ce644942.json b/test/data/enm/study-NWKI-8dfaf1c8-d49d-4280-ab04-6f55ce644942.json
deleted file mode 100644
index ad0c5a0..0000000
--- a/test/data/enm/study-NWKI-8dfaf1c8-d49d-4280-ab04-6f55ce644942.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-8dfaf1c8-d49d-4280-ab04-6f55ce644942",
- "owner": {
- "substance": {
- "uuid": "NWKI-97103918-5eeb-36a3-9981-3aa6dcef5d4c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 100,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8e70a872-3806-4bf9-a8c9-ed59fbd3ca45.json b/test/data/enm/study-NWKI-8e70a872-3806-4bf9-a8c9-ed59fbd3ca45.json
deleted file mode 100644
index ae8fcbf..0000000
--- a/test/data/enm/study-NWKI-8e70a872-3806-4bf9-a8c9-ed59fbd3ca45.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-8e70a872-3806-4bf9-a8c9-ed59fbd3ca45",
- "owner": {
- "substance": {
- "uuid": "NWKI-5adec23a-ab6a-350e-baec-cd088a4667d5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -16.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8e945981-32ca-4c56-b481-45f7b8c630bd.json b/test/data/enm/study-NWKI-8e945981-32ca-4c56-b481-45f7b8c630bd.json
deleted file mode 100644
index 30c5d43..0000000
--- a/test/data/enm/study-NWKI-8e945981-32ca-4c56-b481-45f7b8c630bd.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-8e945981-32ca-4c56-b481-45f7b8c630bd",
- "owner": {
- "substance": {
- "uuid": "NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 3.12,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8ea9b598-a5d6-472a-b449-53e48222d54d.json b/test/data/enm/study-NWKI-8ea9b598-a5d6-472a-b449-53e48222d54d.json
deleted file mode 100644
index 6d764c4..0000000
--- a/test/data/enm/study-NWKI-8ea9b598-a5d6-472a-b449-53e48222d54d.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-8ea9b598-a5d6-472a-b449-53e48222d54d",
- "owner": {
- "substance": {
- "uuid": "NWKI-863267cf-faf0-349b-8046-6074d2e718b5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.soilbio.2013.01.016",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 14
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-8f580200-09f2-41bb-b4e7-c374edca92fb.json b/test/data/enm/study-NWKI-8f580200-09f2-41bb-b4e7-c374edca92fb.json
deleted file mode 100644
index a938cf9..0000000
--- a/test/data/enm/study-NWKI-8f580200-09f2-41bb-b4e7-c374edca92fb.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-8f580200-09f2-41bb-b4e7-c374edca92fb",
- "owner": {
- "substance": {
- "uuid": "NWKI-8090df08-f0f9-3c2f-8769-b51c2adaffc1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 4.98,
- "errorValue": 0.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-90015aaf-7a19-4778-8890-4600221b8e7c.json b/test/data/enm/study-NWKI-90015aaf-7a19-4778-8890-4600221b8e7c.json
deleted file mode 100644
index f1bc153..0000000
--- a/test/data/enm/study-NWKI-90015aaf-7a19-4778-8890-4600221b8e7c.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-90015aaf-7a19-4778-8890-4600221b8e7c",
- "owner": {
- "substance": {
- "uuid": "NWKI-97103918-5eeb-36a3-9981-3aa6dcef5d4c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 12
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-90087566-2c17-4376-8083-810274cbf918.json b/test/data/enm/study-NWKI-90087566-2c17-4376-8083-810274cbf918.json
deleted file mode 100644
index 692e877..0000000
--- a/test/data/enm/study-NWKI-90087566-2c17-4376-8083-810274cbf918.json
+++ /dev/null
@@ -1,52 +0,0 @@
-{
- "uuid": "NWKI-90087566-2c17-4376-8083-810274cbf918",
- "owner": {
- "substance": {
- "uuid": "NWKI-e93603a1-8e0d-372a-8acf-48533b86ecb5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es051043o",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002993_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002993",
- "title": "BAO_0002993 Cytotoxicity Assay"
- },
- "endpoint": "Concentration in cell",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Concentration_in_cell",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 27
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-905cb971-3ccb-4db3-ae56-fc94178df572.json b/test/data/enm/study-NWKI-905cb971-3ccb-4db3-ae56-fc94178df572.json
deleted file mode 100644
index a38ae80..0000000
--- a/test/data/enm/study-NWKI-905cb971-3ccb-4db3-ae56-fc94178df572.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-905cb971-3ccb-4db3-ae56-fc94178df572",
- "owner": {
- "substance": {
- "uuid": "NWKI-ede0d5b5-191a-3003-ac70-a97397ea7bb2"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn301622h",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "TEM",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 75,
- "errorValue": 6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-90819c5d-2b87-424d-9ded-af4f9f46c16f.json b/test/data/enm/study-NWKI-90819c5d-2b87-424d-9ded-af4f9f46c16f.json
deleted file mode 100644
index 60e03b4..0000000
--- a/test/data/enm/study-NWKI-90819c5d-2b87-424d-9ded-af4f9f46c16f.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-90819c5d-2b87-424d-9ded-af4f9f46c16f",
- "owner": {
- "substance": {
- "uuid": "NWKI-9a0a7a86-fd00-3835-9795-a4da7d9d1544"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DCY7"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cy7"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cy7"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-90bd6e98-90e7-4dd7-88cf-41608544e1fe.json b/test/data/enm/study-NWKI-90bd6e98-90e7-4dd7-88cf-41608544e1fe.json
deleted file mode 100644
index de5695d..0000000
--- a/test/data/enm/study-NWKI-90bd6e98-90e7-4dd7-88cf-41608544e1fe.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-90bd6e98-90e7-4dd7-88cf-41608544e1fe",
- "owner": {
- "substance": {
- "uuid": "NWKI-8f43d9fb-94ae-3d2b-8bb6-e8eb060e3b1b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 11
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-91102148-62b9-4896-a4a3-f379046ea916.json b/test/data/enm/study-NWKI-91102148-62b9-4896-a4a3-f379046ea916.json
deleted file mode 100644
index 0e5d002..0000000
--- a/test/data/enm/study-NWKI-91102148-62b9-4896-a4a3-f379046ea916.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-91102148-62b9-4896-a4a3-f379046ea916",
- "owner": {
- "substance": {
- "uuid": "NWKI-0b16e14c-47ab-3075-afc4-0713d06aa54c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-913c2e41-919b-47e9-ba92-572ed92cdfe1.json b/test/data/enm/study-NWKI-913c2e41-919b-47e9-ba92-572ed92cdfe1.json
deleted file mode 100644
index 6e26950..0000000
--- a/test/data/enm/study-NWKI-913c2e41-919b-47e9-ba92-572ed92cdfe1.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-913c2e41-919b-47e9-ba92-572ed92cdfe1",
- "owner": {
- "substance": {
- "uuid": "NWKI-994226ce-df01-3717-b45d-376f645a8d47"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 3.14
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-92592b26-8cd8-49ed-b336-c4a26da733f9.json b/test/data/enm/study-NWKI-92592b26-8cd8-49ed-b336-c4a26da733f9.json
deleted file mode 100644
index 4809823..0000000
--- a/test/data/enm/study-NWKI-92592b26-8cd8-49ed-b336-c4a26da733f9.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-92592b26-8cd8-49ed-b336-c4a26da733f9",
- "owner": {
- "substance": {
- "uuid": "NWKI-ab2d4bdd-7a72-3e26-8552-5bb6027896bb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn202116p",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 665,
- "errorValue": 46
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-928470d1-bec3-4480-a7f7-65e67c7e5c92.json b/test/data/enm/study-NWKI-928470d1-bec3-4480-a7f7-65e67c7e5c92.json
deleted file mode 100644
index a87dd65..0000000
--- a/test/data/enm/study-NWKI-928470d1-bec3-4480-a7f7-65e67c7e5c92.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-928470d1-bec3-4480-a7f7-65e67c7e5c92",
- "owner": {
- "substance": {
- "uuid": "NWKI-3db8eb74-b206-31ad-8c1b-3569703c47cb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 600,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 24
- }
- },
- "result": {
- "unit": null,
- "loValue": 98
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9336a9a1-50e1-4b0c-ac57-c4e25c1b6370.json b/test/data/enm/study-NWKI-9336a9a1-50e1-4b0c-ac57-c4e25c1b6370.json
deleted file mode 100644
index 4b60f31..0000000
--- a/test/data/enm/study-NWKI-9336a9a1-50e1-4b0c-ac57-c4e25c1b6370.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-9336a9a1-50e1-4b0c-ac57-c4e25c1b6370",
- "owner": {
- "substance": {
- "uuid": "NWKI-9142c528-4a84-3566-b678-dc1eef7d22fe"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Mean Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 186
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-933acfd4-a3d4-4e99-90c6-531e2f9e2356.json b/test/data/enm/study-NWKI-933acfd4-a3d4-4e99-90c6-531e2f9e2356.json
deleted file mode 100644
index 34d83e3..0000000
--- a/test/data/enm/study-NWKI-933acfd4-a3d4-4e99-90c6-531e2f9e2356.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-933acfd4-a3d4-4e99-90c6-531e2f9e2356",
- "owner": {
- "substance": {
- "uuid": "NWKI-f9f316e8-e8a9-37f9-877f-86519b3af20e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DFITC-2DProtamine"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "FITC"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "FITC"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-934c5c1a-86df-4901-9e9c-bf4a2ca93465.json b/test/data/enm/study-NWKI-934c5c1a-86df-4901-9e9c-bf4a2ca93465.json
deleted file mode 100644
index d78b33d..0000000
--- a/test/data/enm/study-NWKI-934c5c1a-86df-4901-9e9c-bf4a2ca93465.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-934c5c1a-86df-4901-9e9c-bf4a2ca93465",
- "owner": {
- "substance": {
- "uuid": "NWKI-a33b26f0-2fc7-3aa1-9dd6-27380f725bfe"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.49
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-93603f88-ae1a-4819-843d-c38db4ce16c1.json b/test/data/enm/study-NWKI-93603f88-ae1a-4819-843d-c38db4ce16c1.json
deleted file mode 100644
index 699edd8..0000000
--- a/test/data/enm/study-NWKI-93603f88-ae1a-4819-843d-c38db4ce16c1.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-93603f88-ae1a-4819-843d-c38db4ce16c1",
- "owner": {
- "substance": {
- "uuid": "NWKI-245fc9be-5928-354e-8fd1-ae88663923f1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 21
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-93734b2b-c7e0-4cfc-936b-bd0aa4f5f31e.json b/test/data/enm/study-NWKI-93734b2b-c7e0-4cfc-936b-bd0aa4f5f31e.json
deleted file mode 100644
index cb953d8..0000000
--- a/test/data/enm/study-NWKI-93734b2b-c7e0-4cfc-936b-bd0aa4f5f31e.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-93734b2b-c7e0-4cfc-936b-bd0aa4f5f31e",
- "owner": {
- "substance": {
- "uuid": "NWKI-fd891814-04d2-30bc-a0b6-cc3149bf75ec"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 17
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-93a75471-e455-444d-a639-c69931789c11.json b/test/data/enm/study-NWKI-93a75471-e455-444d-a639-c69931789c11.json
deleted file mode 100644
index d0ffdf1..0000000
--- a/test/data/enm/study-NWKI-93a75471-e455-444d-a639-c69931789c11.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-93a75471-e455-444d-a639-c69931789c11",
- "owner": {
- "substance": {
- "uuid": "NWKI-18aebb90-aacb-3e15-b516-4d3683e9c27b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "BET",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 10
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-93d38c82-285c-4800-831e-0e4ccdb61c13.json b/test/data/enm/study-NWKI-93d38c82-285c-4800-831e-0e4ccdb61c13.json
deleted file mode 100644
index 9638135..0000000
--- a/test/data/enm/study-NWKI-93d38c82-285c-4800-831e-0e4ccdb61c13.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-93d38c82-285c-4800-831e-0e4ccdb61c13",
- "owner": {
- "substance": {
- "uuid": "NWKI-8c5b9350-2c03-3173-9615-cabfbe6929c9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Metabolic Activity",
- "guideline": [
- "Tetrazolium Salt Cleavage"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Tetrazolium Salt Cleavage"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Metabolic_Activity",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 40
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-941a3ff6-4f05-493d-ad80-2ec04ab35035.json b/test/data/enm/study-NWKI-941a3ff6-4f05-493d-ad80-2ec04ab35035.json
deleted file mode 100644
index 6ce8d37..0000000
--- a/test/data/enm/study-NWKI-941a3ff6-4f05-493d-ad80-2ec04ab35035.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-941a3ff6-4f05-493d-ad80-2ec04ab35035",
- "owner": {
- "substance": {
- "uuid": "NWKI-ec00c05f-0b35-3c5a-b16f-7a3560213764"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 38
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-94f8825d-c863-4642-9a16-cc7b64ed4253.json b/test/data/enm/study-NWKI-94f8825d-c863-4642-9a16-cc7b64ed4253.json
deleted file mode 100644
index d5c0f62..0000000
--- a/test/data/enm/study-NWKI-94f8825d-c863-4642-9a16-cc7b64ed4253.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-94f8825d-c863-4642-9a16-cc7b64ed4253",
- "owner": {
- "substance": {
- "uuid": "NWKI-bbb67d89-eaff-38ab-ba4f-403bfb064a0c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-94fd6054-3823-4ca0-b190-a54a3c38cc49.json b/test/data/enm/study-NWKI-94fd6054-3823-4ca0-b190-a54a3c38cc49.json
deleted file mode 100644
index 94b94cf..0000000
--- a/test/data/enm/study-NWKI-94fd6054-3823-4ca0-b190-a54a3c38cc49.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-94fd6054-3823-4ca0-b190-a54a3c38cc49",
- "owner": {
- "substance": {
- "uuid": "NWKI-7181cc57-548a-3117-b59a-bfff2933c0b5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390.2015.1017022",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Diameter",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Diameter",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 180
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-950a3601-d327-49a5-aaa2-f30b2e8f3341.json b/test/data/enm/study-NWKI-950a3601-d327-49a5-aaa2-f30b2e8f3341.json
deleted file mode 100644
index 5de3a94..0000000
--- a/test/data/enm/study-NWKI-950a3601-d327-49a5-aaa2-f30b2e8f3341.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-950a3601-d327-49a5-aaa2-f30b2e8f3341",
- "owner": {
- "substance": {
- "uuid": "NWKI-3a3b2bcd-8284-37dc-a619-56ffbd7ebd68"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn2021056",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": 27.6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-95983ce9-209e-472b-b9dd-3cb5ef932993.json b/test/data/enm/study-NWKI-95983ce9-209e-472b-b9dd-3cb5ef932993.json
deleted file mode 100644
index fc92d7e..0000000
--- a/test/data/enm/study-NWKI-95983ce9-209e-472b-b9dd-3cb5ef932993.json
+++ /dev/null
@@ -1,65 +0,0 @@
-{
- "uuid": "NWKI-95983ce9-209e-472b-b9dd-3cb5ef932993",
- "owner": {
- "substance": {
- "uuid": "NWKI-4358aa69-dec1-387a-b7ea-2238198ccdff"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "Serum": {
- "loValue": "cMEM"
- },
- "pH": {
- "loValue": 7.26
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -19
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-95c1843c-939a-4733-93f9-ec825c192e00.json b/test/data/enm/study-NWKI-95c1843c-939a-4733-93f9-ec825c192e00.json
deleted file mode 100644
index 26d7941..0000000
--- a/test/data/enm/study-NWKI-95c1843c-939a-4733-93f9-ec825c192e00.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-95c1843c-939a-4733-93f9-ec825c192e00",
- "owner": {
- "substance": {
- "uuid": "NWKI-8ef21404-e101-37c8-8206-32f526d75012"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 5,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-95c4fa9c-3b2f-4864-8512-8bac993fa381.json b/test/data/enm/study-NWKI-95c4fa9c-3b2f-4864-8512-8bac993fa381.json
deleted file mode 100644
index 8186dfa..0000000
--- a/test/data/enm/study-NWKI-95c4fa9c-3b2f-4864-8512-8bac993fa381.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-95c4fa9c-3b2f-4864-8512-8bac993fa381",
- "owner": {
- "substance": {
- "uuid": "NWKI-82c12809-d7af-3061-a531-1db744c521f0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": 0.766
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-96076900-e780-4903-b87b-e239a69a3691.json b/test/data/enm/study-NWKI-96076900-e780-4903-b87b-e239a69a3691.json
deleted file mode 100644
index 86d164f..0000000
--- a/test/data/enm/study-NWKI-96076900-e780-4903-b87b-e239a69a3691.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-96076900-e780-4903-b87b-e239a69a3691",
- "owner": {
- "substance": {
- "uuid": "NWKI-bbce341e-3e4d-37f9-a891-5462ada32180"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 68
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-961c71f1-8e7a-4590-aa48-4562e0561b3f.json b/test/data/enm/study-NWKI-961c71f1-8e7a-4590-aa48-4562e0561b3f.json
deleted file mode 100644
index d31f339..0000000
--- a/test/data/enm/study-NWKI-961c71f1-8e7a-4590-aa48-4562e0561b3f.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-961c71f1-8e7a-4590-aa48-4562e0561b3f",
- "owner": {
- "substance": {
- "uuid": "NWKI-d8f70c6c-3496-3ad3-8ab3-e4f08a178d30"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 250,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 95
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-96837237-0aba-461d-be45-d3ddab98b478.json b/test/data/enm/study-NWKI-96837237-0aba-461d-be45-d3ddab98b478.json
deleted file mode 100644
index 244c88d..0000000
--- a/test/data/enm/study-NWKI-96837237-0aba-461d-be45-d3ddab98b478.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-96837237-0aba-461d-be45-d3ddab98b478",
- "owner": {
- "substance": {
- "uuid": "NWKI-eccbd5c0-7cdb-3dc5-b9e3-8a7e17b3915a"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -67.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-968d1718-be47-4ee5-a2df-f5da138e2b81.json b/test/data/enm/study-NWKI-968d1718-be47-4ee5-a2df-f5da138e2b81.json
deleted file mode 100644
index b687235..0000000
--- a/test/data/enm/study-NWKI-968d1718-be47-4ee5-a2df-f5da138e2b81.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-968d1718-be47-4ee5-a2df-f5da138e2b81",
- "owner": {
- "substance": {
- "uuid": "NWKI-47d254de-8242-3374-9ed3-085227d473cc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DPEG-2DED-2DAminoSPARK680"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PEG"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PEG"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-96a0b84b-a6a7-4501-adc9-54c01507d896.json b/test/data/enm/study-NWKI-96a0b84b-a6a7-4501-adc9-54c01507d896.json
deleted file mode 100644
index cde8503..0000000
--- a/test/data/enm/study-NWKI-96a0b84b-a6a7-4501-adc9-54c01507d896.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-96a0b84b-a6a7-4501-adc9-54c01507d896",
- "owner": {
- "substance": {
- "uuid": "NWKI-de03994b-9d74-3e39-aa41-e7df34384442"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-96b1d137-5f38-484c-9d0b-62e62dcf98ac.json b/test/data/enm/study-NWKI-96b1d137-5f38-484c-9d0b-62e62dcf98ac.json
deleted file mode 100644
index 6aa2c66..0000000
--- a/test/data/enm/study-NWKI-96b1d137-5f38-484c-9d0b-62e62dcf98ac.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-96b1d137-5f38-484c-9d0b-62e62dcf98ac",
- "owner": {
- "substance": {
- "uuid": "NWKI-47d254de-8242-3374-9ed3-085227d473cc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-97080abf-0df0-4681-a038-af98d3e0fec5.json b/test/data/enm/study-NWKI-97080abf-0df0-4681-a038-af98d3e0fec5.json
deleted file mode 100644
index a4c2ef6..0000000
--- a/test/data/enm/study-NWKI-97080abf-0df0-4681-a038-af98d3e0fec5.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-97080abf-0df0-4681-a038-af98d3e0fec5",
- "owner": {
- "substance": {
- "uuid": "NWKI-56d49cc3-4a76-354b-9a77-4b2ecb2dbef0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Metabolic Activity",
- "guideline": [
- "Tetrazolium Salt Cleavage"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Tetrazolium Salt Cleavage"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Metabolic_Activity",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 80,
- "unit": "ug/cm^2"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 55
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9729ff94-c90e-4b2a-bc4a-6b45455ca4a2.json b/test/data/enm/study-NWKI-9729ff94-c90e-4b2a-bc4a-6b45455ca4a2.json
deleted file mode 100644
index c61b68a..0000000
--- a/test/data/enm/study-NWKI-9729ff94-c90e-4b2a-bc4a-6b45455ca4a2.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-9729ff94-c90e-4b2a-bc4a-6b45455ca4a2",
- "owner": {
- "substance": {
- "uuid": "NWKI-7998492c-3902-3cc2-9f92-cdfae53cfc02"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es051043o",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002993_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002993",
- "title": "BAO_0002993 Cytotoxicity Assay"
- },
- "endpoint": "Concentration in cell",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Concentration_in_cell",
- "conditions": {
- "Concentration in culture medium": {
- "loValue": 100,
- "unit": "ng/g"
- },
- "Time": {
- "loValue": 1,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-975f2041-3c03-47a0-8dea-cdcf547288e4.json b/test/data/enm/study-NWKI-975f2041-3c03-47a0-8dea-cdcf547288e4.json
deleted file mode 100644
index 4d55c57..0000000
--- a/test/data/enm/study-NWKI-975f2041-3c03-47a0-8dea-cdcf547288e4.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "uuid": "NWKI-975f2041-3c03-47a0-8dea-cdcf547288e4",
- "owner": {
- "substance": {
- "uuid": "NWKI-3fb9be70-8c15-3b78-94e7-5c3c88799818"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe2O3"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe2O3"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DED"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Ethylene_Diamine"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "NCCN"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Ethylene_Diamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-97d7329d-ede3-47f2-bae7-88072c73ac5e.json b/test/data/enm/study-NWKI-97d7329d-ede3-47f2-bae7-88072c73ac5e.json
deleted file mode 100644
index 30840dc..0000000
--- a/test/data/enm/study-NWKI-97d7329d-ede3-47f2-bae7-88072c73ac5e.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-97d7329d-ede3-47f2-bae7-88072c73ac5e",
- "owner": {
- "substance": {
- "uuid": "NWKI-3c8c8bb2-416f-3bff-862a-8433538cd4c5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 0.0,
- "upQualifier": "<=",
- "upValue": 25
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-97f54c1c-0ec7-4273-a92d-245c3efa4b33.json b/test/data/enm/study-NWKI-97f54c1c-0ec7-4273-a92d-245c3efa4b33.json
deleted file mode 100644
index 800ff32..0000000
--- a/test/data/enm/study-NWKI-97f54c1c-0ec7-4273-a92d-245c3efa4b33.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-97f54c1c-0ec7-4273-a92d-245c3efa4b33",
- "owner": {
- "substance": {
- "uuid": "NWKI-3fb9be70-8c15-3b78-94e7-5c3c88799818"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DED"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PVA"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9833b4a9-d932-4d79-846c-1a26b3659885.json b/test/data/enm/study-NWKI-9833b4a9-d932-4d79-846c-1a26b3659885.json
deleted file mode 100644
index 75a419e..0000000
--- a/test/data/enm/study-NWKI-9833b4a9-d932-4d79-846c-1a26b3659885.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-9833b4a9-d932-4d79-846c-1a26b3659885",
- "owner": {
- "substance": {
- "uuid": "NWKI-e866549e-38cf-3b98-a0b1-a483e275d261"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1080/10934520600966177",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loQualifier": ">=",
- "loValue": 20,
- "upQualifier": "<=",
- "upValue": 40
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-98d15c68-20d6-4106-a239-99dcdb3d6c9c.json b/test/data/enm/study-NWKI-98d15c68-20d6-4106-a239-99dcdb3d6c9c.json
deleted file mode 100644
index 7ad2811..0000000
--- a/test/data/enm/study-NWKI-98d15c68-20d6-4106-a239-99dcdb3d6c9c.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-98d15c68-20d6-4106-a239-99dcdb3d6c9c",
- "owner": {
- "substance": {
- "uuid": "NWKI-0b663f5f-1386-3cc5-ba6b-9ff2bb39d4ff"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/gt.2011.95",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "TEM",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 13,
- "errorValue": 11
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-98ef698c-7c3a-4e90-b8d2-09f1be340f64.json b/test/data/enm/study-NWKI-98ef698c-7c3a-4e90-b8d2-09f1be340f64.json
deleted file mode 100644
index 3fe825b..0000000
--- a/test/data/enm/study-NWKI-98ef698c-7c3a-4e90-b8d2-09f1be340f64.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "NWKI-98ef698c-7c3a-4e90-b8d2-09f1be340f64",
- "owner": {
- "substance": {
- "uuid": "NWKI-f1cc0abb-2905-3699-be62-b238a21e6bad"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": -35,
- "upQualifier": "<=",
- "upValue": 48
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-990dfff9-347f-4340-a32d-f4c62938677f.json b/test/data/enm/study-NWKI-990dfff9-347f-4340-a32d-f4c62938677f.json
deleted file mode 100644
index 6ace092..0000000
--- a/test/data/enm/study-NWKI-990dfff9-347f-4340-a32d-f4c62938677f.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-990dfff9-347f-4340-a32d-f4c62938677f",
- "owner": {
- "substance": {
- "uuid": "NWKI-82665bf4-5c5e-325a-a7ee-44ff1c6045b7"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 10,
- "errorValue": 2.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-998b320c-18fa-4dc8-9be8-a5644f215528.json b/test/data/enm/study-NWKI-998b320c-18fa-4dc8-9be8-a5644f215528.json
deleted file mode 100644
index cce775e..0000000
--- a/test/data/enm/study-NWKI-998b320c-18fa-4dc8-9be8-a5644f215528.json
+++ /dev/null
@@ -1,65 +0,0 @@
-{
- "uuid": "NWKI-998b320c-18fa-4dc8-9be8-a5644f215528",
- "owner": {
- "substance": {
- "uuid": "NWKI-895a506b-c331-3576-bf9e-cbcde5822c11"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "Serum": {
- "loValue": "cMEM"
- },
- "pH": {
- "loValue": 7.21
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9a2cbb96-951d-4d49-b8cc-2bf8e080f558.json b/test/data/enm/study-NWKI-9a2cbb96-951d-4d49-b8cc-2bf8e080f558.json
deleted file mode 100644
index c18daab..0000000
--- a/test/data/enm/study-NWKI-9a2cbb96-951d-4d49-b8cc-2bf8e080f558.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-9a2cbb96-951d-4d49-b8cc-2bf8e080f558",
- "owner": {
- "substance": {
- "uuid": "NWKI-e4dab3d9-2699-3a0b-9e9c-f257088142cc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9a5a6b0a-6e10-4d89-b987-6984da13de1c.json b/test/data/enm/study-NWKI-9a5a6b0a-6e10-4d89-b987-6984da13de1c.json
deleted file mode 100644
index 7076b24..0000000
--- a/test/data/enm/study-NWKI-9a5a6b0a-6e10-4d89-b987-6984da13de1c.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-9a5a6b0a-6e10-4d89-b987-6984da13de1c",
- "owner": {
- "substance": {
- "uuid": "NWKI-52edeff5-900d-3f5a-86ba-550e9b368239"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 10,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9a5fcbe2-ff72-4d68-92e5-266296adfb3a.json b/test/data/enm/study-NWKI-9a5fcbe2-ff72-4d68-92e5-266296adfb3a.json
deleted file mode 100644
index 1b765ce..0000000
--- a/test/data/enm/study-NWKI-9a5fcbe2-ff72-4d68-92e5-266296adfb3a.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-9a5fcbe2-ff72-4d68-92e5-266296adfb3a",
- "owner": {
- "substance": {
- "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -53
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9a7836ea-becd-42e4-ab1f-8e90b83a7e2c.json b/test/data/enm/study-NWKI-9a7836ea-becd-42e4-ab1f-8e90b83a7e2c.json
deleted file mode 100644
index 97bcc68..0000000
--- a/test/data/enm/study-NWKI-9a7836ea-becd-42e4-ab1f-8e90b83a7e2c.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-9a7836ea-becd-42e4-ab1f-8e90b83a7e2c",
- "owner": {
- "substance": {
- "uuid": "NWKI-9a41ca03-303d-3116-89fb-2335cc1bad2d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Average Length",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Average Length",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "μm",
- "loValue": 1.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9ae54803-8808-4fe9-8036-2539cf8d2e0e.json b/test/data/enm/study-NWKI-9ae54803-8808-4fe9-8036-2539cf8d2e0e.json
deleted file mode 100644
index 0c36f71..0000000
--- a/test/data/enm/study-NWKI-9ae54803-8808-4fe9-8036-2539cf8d2e0e.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "uuid": "NWKI-9ae54803-8808-4fe9-8036-2539cf8d2e0e",
- "owner": {
- "substance": {
- "uuid": "NWKI-4f91db77-4cd0-3482-b989-571d2a9a4228"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Ag"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Ag"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "MESCoating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "MES"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "SCCS(=O)(=O)[O-].[Na+]"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "MES"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9b836306-69bf-4950-8367-fb3b78c80a75.json b/test/data/enm/study-NWKI-9b836306-69bf-4950-8367-fb3b78c80a75.json
deleted file mode 100644
index 4887514..0000000
--- a/test/data/enm/study-NWKI-9b836306-69bf-4950-8367-fb3b78c80a75.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-9b836306-69bf-4950-8367-fb3b78c80a75",
- "owner": {
- "substance": {
- "uuid": "NWKI-8a968835-50ab-33df-bf5e-42de32d01c15"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Colon HT29",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 600,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 24
- }
- },
- "result": {
- "unit": null,
- "loValue": 95
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9baea477-0a08-49d4-aa31-5a4b6fc7fd35.json b/test/data/enm/study-NWKI-9baea477-0a08-49d4-aa31-5a4b6fc7fd35.json
deleted file mode 100644
index 2bd5b13..0000000
--- a/test/data/enm/study-NWKI-9baea477-0a08-49d4-aa31-5a4b6fc7fd35.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-9baea477-0a08-49d4-aa31-5a4b6fc7fd35",
- "owner": {
- "substance": {
- "uuid": "NWKI-80364e0e-be06-3645-a3ae-880ae0edddef"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 30.5,
- "errorValue": 1.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9bc460f1-dc07-4f51-9b67-5e59b51cfd4e.json b/test/data/enm/study-NWKI-9bc460f1-dc07-4f51-9b67-5e59b51cfd4e.json
deleted file mode 100644
index 4e0fedf..0000000
--- a/test/data/enm/study-NWKI-9bc460f1-dc07-4f51-9b67-5e59b51cfd4e.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-9bc460f1-dc07-4f51-9b67-5e59b51cfd4e",
- "owner": {
- "substance": {
- "uuid": "NWKI-417f0133-8f2c-3255-bdcf-7d71ac295d00"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 200,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9bd3843d-1379-49b1-a22b-1aa6fea3b982.json b/test/data/enm/study-NWKI-9bd3843d-1379-49b1-a22b-1aa6fea3b982.json
deleted file mode 100644
index d0e3227..0000000
--- a/test/data/enm/study-NWKI-9bd3843d-1379-49b1-a22b-1aa6fea3b982.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-9bd3843d-1379-49b1-a22b-1aa6fea3b982",
- "owner": {
- "substance": {
- "uuid": "NWKI-d8f70c6c-3496-3ad3-8ab3-e4f08a178d30"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 500,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 93
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9cba9eb2-7783-442d-a439-a769095f2a23.json b/test/data/enm/study-NWKI-9cba9eb2-7783-442d-a439-a769095f2a23.json
deleted file mode 100644
index 26dd9ee..0000000
--- a/test/data/enm/study-NWKI-9cba9eb2-7783-442d-a439-a769095f2a23.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-9cba9eb2-7783-442d-a439-a769095f2a23",
- "owner": {
- "substance": {
- "uuid": "NWKI-5454d5cb-1033-3d6f-a31e-038752525533"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 8,
- "upQualifier": "<=",
- "upValue": 15
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9d557d25-bc4f-4eb4-bf94-4c45d94ee256.json b/test/data/enm/study-NWKI-9d557d25-bc4f-4eb4-bf94-4c45d94ee256.json
deleted file mode 100644
index d3f2145..0000000
--- a/test/data/enm/study-NWKI-9d557d25-bc4f-4eb4-bf94-4c45d94ee256.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-9d557d25-bc4f-4eb4-bf94-4c45d94ee256",
- "owner": {
- "substance": {
- "uuid": "NWKI-56d49cc3-4a76-354b-9a77-4b2ecb2dbef0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002167_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002167",
- "title": "BAO_0002167 Genotoxicity Assay"
- },
- "endpoint": "DNA in Tail",
- "guideline": [
- "Fpg-2Dmodified Comet Assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Fpg-2Dmodified Comet Assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "DNA_in_Tail",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- },
- "FPG Content": {
- "loValue": 100
- }
- },
- "result": {
- "unit": "%",
- "loValue": 23
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9d6b99fd-4b45-4711-8ec3-a69204d695a7.json b/test/data/enm/study-NWKI-9d6b99fd-4b45-4711-8ec3-a69204d695a7.json
deleted file mode 100644
index 5509d0e..0000000
--- a/test/data/enm/study-NWKI-9d6b99fd-4b45-4711-8ec3-a69204d695a7.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-9d6b99fd-4b45-4711-8ec3-a69204d695a7",
- "owner": {
- "substance": {
- "uuid": "NWKI-c2ab6def-8305-3b78-958a-4657b3363e11"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 142
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9d93f359-8aba-4e46-9ad1-2976386169a0.json b/test/data/enm/study-NWKI-9d93f359-8aba-4e46-9ad1-2976386169a0.json
deleted file mode 100644
index 7950aed..0000000
--- a/test/data/enm/study-NWKI-9d93f359-8aba-4e46-9ad1-2976386169a0.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-9d93f359-8aba-4e46-9ad1-2976386169a0",
- "owner": {
- "substance": {
- "uuid": "NWKI-8ef21404-e101-37c8-8206-32f526d75012"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 25,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9e3a1375-4b1b-4380-9394-cb169871a210.json b/test/data/enm/study-NWKI-9e3a1375-4b1b-4380-9394-cb169871a210.json
deleted file mode 100644
index f6bc19c..0000000
--- a/test/data/enm/study-NWKI-9e3a1375-4b1b-4380-9394-cb169871a210.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-9e3a1375-4b1b-4380-9394-cb169871a210",
- "owner": {
- "substance": {
- "uuid": "NWKI-c8d9772c-e50e-3c71-986c-e45692150d71"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -12
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9f29113f-574a-4ebb-bf4c-bc805d2ed845.json b/test/data/enm/study-NWKI-9f29113f-574a-4ebb-bf4c-bc805d2ed845.json
deleted file mode 100644
index c80405e..0000000
--- a/test/data/enm/study-NWKI-9f29113f-574a-4ebb-bf4c-bc805d2ed845.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-9f29113f-574a-4ebb-bf4c-bc805d2ed845",
- "owner": {
- "substance": {
- "uuid": "NWKI-e476955f-97bd-3e4c-8bef-03f56fe1b15b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 28.4,
- "errorValue": 7.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9f39a0b9-0fc2-41a2-b130-fca0712881ea.json b/test/data/enm/study-NWKI-9f39a0b9-0fc2-41a2-b130-fca0712881ea.json
deleted file mode 100644
index b77092c..0000000
--- a/test/data/enm/study-NWKI-9f39a0b9-0fc2-41a2-b130-fca0712881ea.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-9f39a0b9-0fc2-41a2-b130-fca0712881ea",
- "owner": {
- "substance": {
- "uuid": "NWKI-994226ce-df01-3717-b45d-376f645a8d47"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 3.14
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9f4fcd1f-7ab6-4993-9092-f2a266d44bcd.json b/test/data/enm/study-NWKI-9f4fcd1f-7ab6-4993-9092-f2a266d44bcd.json
deleted file mode 100644
index 1f76861..0000000
--- a/test/data/enm/study-NWKI-9f4fcd1f-7ab6-4993-9092-f2a266d44bcd.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-9f4fcd1f-7ab6-4993-9092-f2a266d44bcd",
- "owner": {
- "substance": {
- "uuid": "NWKI-4551e0f7-e515-3cdb-a099-c2b99b04883d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 15,
- "upQualifier": "<=",
- "upValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-9f50cfff-1264-4196-8cf6-df7e0ea4e3f3.json b/test/data/enm/study-NWKI-9f50cfff-1264-4196-8cf6-df7e0ea4e3f3.json
deleted file mode 100644
index 1ba0852..0000000
--- a/test/data/enm/study-NWKI-9f50cfff-1264-4196-8cf6-df7e0ea4e3f3.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-9f50cfff-1264-4196-8cf6-df7e0ea4e3f3",
- "owner": {
- "substance": {
- "uuid": "NWKI-5adec23a-ab6a-350e-baec-cd088a4667d5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "CdSe"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "CdSe"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "COOH-2DAmphPolymer"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Amphiphillic_Polymer"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Amphiphillic_Polymer"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a0041084-f829-4ebd-8708-f0ab1fc548fd.json b/test/data/enm/study-NWKI-a0041084-f829-4ebd-8708-f0ab1fc548fd.json
deleted file mode 100644
index 891e761..0000000
--- a/test/data/enm/study-NWKI-a0041084-f829-4ebd-8708-f0ab1fc548fd.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-a0041084-f829-4ebd-8708-f0ab1fc548fd",
- "owner": {
- "substance": {
- "uuid": "NWKI-d63286d0-3205-3216-92ce-e9e2632aca9e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DPEG-2DAminoSPARK680IVM"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PVA"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a0202f3b-8e81-4aac-b85c-b4a9ee597300.json b/test/data/enm/study-NWKI-a0202f3b-8e81-4aac-b85c-b4a9ee597300.json
deleted file mode 100644
index fc81e0d..0000000
--- a/test/data/enm/study-NWKI-a0202f3b-8e81-4aac-b85c-b4a9ee597300.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-a0202f3b-8e81-4aac-b85c-b4a9ee597300",
- "owner": {
- "substance": {
- "uuid": "NWKI-5f88a526-3e3f-3da5-8082-8d1da0cdfefa"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Mean Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 150
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a05efe4f-e78d-4d0d-8d5b-8c2a0f123326.json b/test/data/enm/study-NWKI-a05efe4f-e78d-4d0d-8d5b-8c2a0f123326.json
deleted file mode 100644
index 647c5bb..0000000
--- a/test/data/enm/study-NWKI-a05efe4f-e78d-4d0d-8d5b-8c2a0f123326.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-a05efe4f-e78d-4d0d-8d5b-8c2a0f123326",
- "owner": {
- "substance": {
- "uuid": "NWKI-cfea3b7c-ee39-34ef-8349-16b1e7825861"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DRhodamine-2DProtamine"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PVA"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a077f85d-f2ee-4b1b-aada-3e194e724e86.json b/test/data/enm/study-NWKI-a077f85d-f2ee-4b1b-aada-3e194e724e86.json
deleted file mode 100644
index 2c332be..0000000
--- a/test/data/enm/study-NWKI-a077f85d-f2ee-4b1b-aada-3e194e724e86.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-a077f85d-f2ee-4b1b-aada-3e194e724e86",
- "owner": {
- "substance": {
- "uuid": "NWKI-8667bfb7-a5da-3eb0-b9d7-86e2c8f06f19"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 60,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 24
- }
- },
- "result": {
- "unit": null,
- "loValue": 95
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a08fdecf-eefe-4c5b-8e7c-19bd63a19702.json b/test/data/enm/study-NWKI-a08fdecf-eefe-4c5b-8e7c-19bd63a19702.json
deleted file mode 100644
index 36c9115..0000000
--- a/test/data/enm/study-NWKI-a08fdecf-eefe-4c5b-8e7c-19bd63a19702.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-a08fdecf-eefe-4c5b-8e7c-19bd63a19702",
- "owner": {
- "substance": {
- "uuid": "NWKI-e93603a1-8e0d-372a-8acf-48533b86ecb5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es051043o",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002993_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002993",
- "title": "BAO_0002993 Cytotoxicity Assay"
- },
- "endpoint": "Concentration in cell",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Concentration_in_cell",
- "conditions": {
- "Concentration in culture medium": {
- "loValue": 100,
- "unit": "ng/g"
- },
- "Time": {
- "loValue": 3,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 45
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a0a7dbb4-fe64-4040-940c-62a0f9c8299c.json b/test/data/enm/study-NWKI-a0a7dbb4-fe64-4040-940c-62a0f9c8299c.json
deleted file mode 100644
index e6c2275..0000000
--- a/test/data/enm/study-NWKI-a0a7dbb4-fe64-4040-940c-62a0f9c8299c.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-a0a7dbb4-fe64-4040-940c-62a0f9c8299c",
- "owner": {
- "substance": {
- "uuid": "NWKI-3db8eb74-b206-31ad-8c1b-3569703c47cb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -55
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a0d28be6-62ff-4ced-91ef-cd3fcee39631.json b/test/data/enm/study-NWKI-a0d28be6-62ff-4ced-91ef-cd3fcee39631.json
deleted file mode 100644
index 009494a..0000000
--- a/test/data/enm/study-NWKI-a0d28be6-62ff-4ced-91ef-cd3fcee39631.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-a0d28be6-62ff-4ced-91ef-cd3fcee39631",
- "owner": {
- "substance": {
- "uuid": "NWKI-ef8660fd-e624-3a94-91bc-ad5a6e47bcf3"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 33
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a0faadeb-60cf-4a7e-b904-1d463f87da8b.json b/test/data/enm/study-NWKI-a0faadeb-60cf-4a7e-b904-1d463f87da8b.json
deleted file mode 100644
index dbf467f..0000000
--- a/test/data/enm/study-NWKI-a0faadeb-60cf-4a7e-b904-1d463f87da8b.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-a0faadeb-60cf-4a7e-b904-1d463f87da8b",
- "owner": {
- "substance": {
- "uuid": "NWKI-758c06ae-dc1f-3cbe-a409-91d14e5113d1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DED-2DVT750"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PVA"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a2074d37-5a26-4834-b65e-3816b8210262.json b/test/data/enm/study-NWKI-a2074d37-5a26-4834-b65e-3816b8210262.json
deleted file mode 100644
index abc6a9b..0000000
--- a/test/data/enm/study-NWKI-a2074d37-5a26-4834-b65e-3816b8210262.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-a2074d37-5a26-4834-b65e-3816b8210262",
- "owner": {
- "substance": {
- "uuid": "NWKI-ae63c430-7a80-35c3-828d-c859d81ce698"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 4.4,
- "errorValue": 0.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a24c3d6d-c9f3-4741-9390-285a44c0ee30.json b/test/data/enm/study-NWKI-a24c3d6d-c9f3-4741-9390-285a44c0ee30.json
deleted file mode 100644
index d2abbd8..0000000
--- a/test/data/enm/study-NWKI-a24c3d6d-c9f3-4741-9390-285a44c0ee30.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-a24c3d6d-c9f3-4741-9390-285a44c0ee30",
- "owner": {
- "substance": {
- "uuid": "NWKI-5172b34a-a6f6-398f-ace6-1d30e6bc9efa"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -2.72
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a2790aa9-23c6-4a18-b8a5-6153f6d03feb.json b/test/data/enm/study-NWKI-a2790aa9-23c6-4a18-b8a5-6153f6d03feb.json
deleted file mode 100644
index 15cd41f..0000000
--- a/test/data/enm/study-NWKI-a2790aa9-23c6-4a18-b8a5-6153f6d03feb.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-a2790aa9-23c6-4a18-b8a5-6153f6d03feb",
- "owner": {
- "substance": {
- "uuid": "NWKI-5136670d-2925-31d0-8e12-811f8d67677f"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 282,
- "errorValue": 62
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a2b566c2-10f2-419e-9274-0386e24dff1c.json b/test/data/enm/study-NWKI-a2b566c2-10f2-419e-9274-0386e24dff1c.json
deleted file mode 100644
index 423b37d..0000000
--- a/test/data/enm/study-NWKI-a2b566c2-10f2-419e-9274-0386e24dff1c.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-a2b566c2-10f2-419e-9274-0386e24dff1c",
- "owner": {
- "substance": {
- "uuid": "NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 200,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a2c0c4c4-72b9-4e53-8d19-74e3540576dc.json b/test/data/enm/study-NWKI-a2c0c4c4-72b9-4e53-8d19-74e3540576dc.json
deleted file mode 100644
index b678aa0..0000000
--- a/test/data/enm/study-NWKI-a2c0c4c4-72b9-4e53-8d19-74e3540576dc.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-a2c0c4c4-72b9-4e53-8d19-74e3540576dc",
- "owner": {
- "substance": {
- "uuid": "NWKI-56d49cc3-4a76-354b-9a77-4b2ecb2dbef0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "LDH Release",
- "guideline": [
- "Lactate Dehydrogenase Activity"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Lactate Dehydrogenase Activity"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "LDH_Release",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a2ddf7c5-e959-4091-a35c-ba626cd0e1fb.json b/test/data/enm/study-NWKI-a2ddf7c5-e959-4091-a35c-ba626cd0e1fb.json
deleted file mode 100644
index 3901465..0000000
--- a/test/data/enm/study-NWKI-a2ddf7c5-e959-4091-a35c-ba626cd0e1fb.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-a2ddf7c5-e959-4091-a35c-ba626cd0e1fb",
- "owner": {
- "substance": {
- "uuid": "NWKI-506de59a-ae92-361b-a934-0fdfa41101c0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DVT680-2DProtamine"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a30dd268-00ac-4e0c-a7e4-b96903513235.json b/test/data/enm/study-NWKI-a30dd268-00ac-4e0c-a7e4-b96903513235.json
deleted file mode 100644
index 361c216..0000000
--- a/test/data/enm/study-NWKI-a30dd268-00ac-4e0c-a7e4-b96903513235.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-a30dd268-00ac-4e0c-a7e4-b96903513235",
- "owner": {
- "substance": {
- "uuid": "NWKI-473ed1d8-ae5a-3c80-b3f7-50dbc4fd9a3b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 9.48,
- "errorValue": 1.26
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a354f38a-4a3f-4ff0-98fe-68fdca27d5f3.json b/test/data/enm/study-NWKI-a354f38a-4a3f-4ff0-98fe-68fdca27d5f3.json
deleted file mode 100644
index cfce687..0000000
--- a/test/data/enm/study-NWKI-a354f38a-4a3f-4ff0-98fe-68fdca27d5f3.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "NWKI-a354f38a-4a3f-4ff0-98fe-68fdca27d5f3",
- "owner": {
- "substance": {
- "uuid": "NWKI-34a6262c-7f25-3eea-9dd0-bf1e1df40ca9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn301622h",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 7
- }
- },
- "result": {
- "unit": "mV",
- "loValue": 11,
- "errorValue": 3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a3d44087-49c4-40a0-9453-1e60deb312d2.json b/test/data/enm/study-NWKI-a3d44087-49c4-40a0-9453-1e60deb312d2.json
deleted file mode 100644
index 357c166..0000000
--- a/test/data/enm/study-NWKI-a3d44087-49c4-40a0-9453-1e60deb312d2.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-a3d44087-49c4-40a0-9453-1e60deb312d2",
- "owner": {
- "substance": {
- "uuid": "NWKI-7d4e9d59-fb38-37b9-99ec-b150ed7ce133"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "SiO2"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "SiO2"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "APS_Coating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "APS"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "APS"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a3db8c03-15d1-4df0-bd7a-a29fc48585c9.json b/test/data/enm/study-NWKI-a3db8c03-15d1-4df0-bd7a-a29fc48585c9.json
deleted file mode 100644
index 0d0d515..0000000
--- a/test/data/enm/study-NWKI-a3db8c03-15d1-4df0-bd7a-a29fc48585c9.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-a3db8c03-15d1-4df0-bd7a-a29fc48585c9",
- "owner": {
- "substance": {
- "uuid": "NWKI-3db8eb74-b206-31ad-8c1b-3569703c47cb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 60,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 4
- }
- },
- "result": {
- "unit": null,
- "loValue": 97
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a46036b9-82d3-401d-8618-b8676bd264fc.json b/test/data/enm/study-NWKI-a46036b9-82d3-401d-8618-b8676bd264fc.json
deleted file mode 100644
index c587bd1..0000000
--- a/test/data/enm/study-NWKI-a46036b9-82d3-401d-8618-b8676bd264fc.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-a46036b9-82d3-401d-8618-b8676bd264fc",
- "owner": {
- "substance": {
- "uuid": "NWKI-e7bdb2a3-0b3f-3a38-8d6b-1babc6d92da1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn2021056",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": 19.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a487ab56-09b1-4518-b3da-ee1bd8bf3f25.json b/test/data/enm/study-NWKI-a487ab56-09b1-4518-b3da-ee1bd8bf3f25.json
deleted file mode 100644
index 30eb896..0000000
--- a/test/data/enm/study-NWKI-a487ab56-09b1-4518-b3da-ee1bd8bf3f25.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-a487ab56-09b1-4518-b3da-ee1bd8bf3f25",
- "owner": {
- "substance": {
- "uuid": "NWKI-7ec086b4-bfe8-3246-9c6c-b3565770315b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 21
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a4be5bbf-d6bc-46c2-9bc6-c8436d9212b3.json b/test/data/enm/study-NWKI-a4be5bbf-d6bc-46c2-9bc6-c8436d9212b3.json
deleted file mode 100644
index 41914f1..0000000
--- a/test/data/enm/study-NWKI-a4be5bbf-d6bc-46c2-9bc6-c8436d9212b3.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-a4be5bbf-d6bc-46c2-9bc6-c8436d9212b3",
- "owner": {
- "substance": {
- "uuid": "NWKI-e5b618fd-dd48-3562-9a55-737ac7a68466"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DPEG-2DED-2DVT750"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PEG"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PEG"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a5257051-eb42-478e-95d6-3fa1572c63f3.json b/test/data/enm/study-NWKI-a5257051-eb42-478e-95d6-3fa1572c63f3.json
deleted file mode 100644
index 653877a..0000000
--- a/test/data/enm/study-NWKI-a5257051-eb42-478e-95d6-3fa1572c63f3.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-a5257051-eb42-478e-95d6-3fa1572c63f3",
- "owner": {
- "substance": {
- "uuid": "NWKI-0d776d00-aec4-3a75-9eb3-453909fc50ed"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 28
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a52abca7-ad43-4cee-b5f3-e23c8848b73b.json b/test/data/enm/study-NWKI-a52abca7-ad43-4cee-b5f3-e23c8848b73b.json
deleted file mode 100644
index c5e2468..0000000
--- a/test/data/enm/study-NWKI-a52abca7-ad43-4cee-b5f3-e23c8848b73b.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-a52abca7-ad43-4cee-b5f3-e23c8848b73b",
- "owner": {
- "substance": {
- "uuid": "NWKI-ca37d03d-af78-3982-8ca0-76025e71fcf1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.87
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a5d4f55a-48e0-4401-9f75-ac0c5ceb2f15.json b/test/data/enm/study-NWKI-a5d4f55a-48e0-4401-9f75-ac0c5ceb2f15.json
deleted file mode 100644
index 237d322..0000000
--- a/test/data/enm/study-NWKI-a5d4f55a-48e0-4401-9f75-ac0c5ceb2f15.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-a5d4f55a-48e0-4401-9f75-ac0c5ceb2f15",
- "owner": {
- "substance": {
- "uuid": "NWKI-3b09fdd1-3024-3be3-b1c6-332b44f75f99"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.51
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a5fe4f02-8837-4fad-a530-b2ac0034e3db.json b/test/data/enm/study-NWKI-a5fe4f02-8837-4fad-a530-b2ac0034e3db.json
deleted file mode 100644
index c837db2..0000000
--- a/test/data/enm/study-NWKI-a5fe4f02-8837-4fad-a530-b2ac0034e3db.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-a5fe4f02-8837-4fad-a530-b2ac0034e3db",
- "owner": {
- "substance": {
- "uuid": "NWKI-4832de65-5a92-3849-8061-729a2d83017e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "Shape",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Anatase"
- },
- "effects": [
- {
- "endpoint": "SHAPE",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": null,
- "textValue": "Anatase"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a646b409-1a6d-4fa4-a45e-5033017d227f.json b/test/data/enm/study-NWKI-a646b409-1a6d-4fa4-a45e-5033017d227f.json
deleted file mode 100644
index bd9bba4..0000000
--- a/test/data/enm/study-NWKI-a646b409-1a6d-4fa4-a45e-5033017d227f.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-a646b409-1a6d-4fa4-a45e-5033017d227f",
- "owner": {
- "substance": {
- "uuid": "NWKI-e834e3f1-8c0d-319e-9bac-21c613bdccd0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn200546k",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 0.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a6636f18-d03e-48a9-8a0c-7c445f8af478.json b/test/data/enm/study-NWKI-a6636f18-d03e-48a9-8a0c-7c445f8af478.json
deleted file mode 100644
index 63a6412..0000000
--- a/test/data/enm/study-NWKI-a6636f18-d03e-48a9-8a0c-7c445f8af478.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-a6636f18-d03e-48a9-8a0c-7c445f8af478",
- "owner": {
- "substance": {
- "uuid": "NWKI-d63286d0-3205-3216-92ce-e9e2632aca9e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe2O3"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe2O3"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DPEG-2DAminoSPARK680IVM"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Amino_SPARK680_IVM"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Amino_SPARK680_IVM"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a6a7a56c-486a-4d66-a2f6-021e9a5b93fa.json b/test/data/enm/study-NWKI-a6a7a56c-486a-4d66-a2f6-021e9a5b93fa.json
deleted file mode 100644
index dfd8125..0000000
--- a/test/data/enm/study-NWKI-a6a7a56c-486a-4d66-a2f6-021e9a5b93fa.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-a6a7a56c-486a-4d66-a2f6-021e9a5b93fa",
- "owner": {
- "substance": {
- "uuid": "NWKI-1af17b5b-947a-3fd2-a000-cadf542dea4d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 15,
- "errorValue": 1.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a6d0db9c-be44-4a13-9c24-f5422885575a.json b/test/data/enm/study-NWKI-a6d0db9c-be44-4a13-9c24-f5422885575a.json
deleted file mode 100644
index c1462d1..0000000
--- a/test/data/enm/study-NWKI-a6d0db9c-be44-4a13-9c24-f5422885575a.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-a6d0db9c-be44-4a13-9c24-f5422885575a",
- "owner": {
- "substance": {
- "uuid": "NWKI-11ae9232-1521-31d6-9466-c902c43d94fe"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -9.23
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a6e0ae37-6f1a-403c-9e07-7b9fb9334132.json b/test/data/enm/study-NWKI-a6e0ae37-6f1a-403c-9e07-7b9fb9334132.json
deleted file mode 100644
index e53c169..0000000
--- a/test/data/enm/study-NWKI-a6e0ae37-6f1a-403c-9e07-7b9fb9334132.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-a6e0ae37-6f1a-403c-9e07-7b9fb9334132",
- "owner": {
- "substance": {
- "uuid": "NWKI-d63286d0-3205-3216-92ce-e9e2632aca9e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -15.6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a7636dce-30ed-41cb-8392-69454c3d7fb0.json b/test/data/enm/study-NWKI-a7636dce-30ed-41cb-8392-69454c3d7fb0.json
deleted file mode 100644
index d31dad1..0000000
--- a/test/data/enm/study-NWKI-a7636dce-30ed-41cb-8392-69454c3d7fb0.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-a7636dce-30ed-41cb-8392-69454c3d7fb0",
- "owner": {
- "substance": {
- "uuid": "NWKI-0a6e319e-71fc-37f7-b88d-fbda2e07ccc1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 500,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 100
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a7c2edb4-81b6-42db-ac24-f886e5ac4c55.json b/test/data/enm/study-NWKI-a7c2edb4-81b6-42db-ac24-f886e5ac4c55.json
deleted file mode 100644
index 9e5c5e1..0000000
--- a/test/data/enm/study-NWKI-a7c2edb4-81b6-42db-ac24-f886e5ac4c55.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-a7c2edb4-81b6-42db-ac24-f886e5ac4c55",
- "owner": {
- "substance": {
- "uuid": "NWKI-b19125a9-4499-3e0e-aa0c-7792401f4900"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a89bb7de-61c6-416e-8304-e7ec2111b843.json b/test/data/enm/study-NWKI-a89bb7de-61c6-416e-8304-e7ec2111b843.json
deleted file mode 100644
index a8a9822..0000000
--- a/test/data/enm/study-NWKI-a89bb7de-61c6-416e-8304-e7ec2111b843.json
+++ /dev/null
@@ -1,55 +0,0 @@
-{
- "uuid": "NWKI-a89bb7de-61c6-416e-8304-e7ec2111b843",
- "owner": {
- "substance": {
- "uuid": "NWKI-2af8ed34-029d-3644-8327-23a596cfae0d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_MELTING_SECTION",
- "term": "http://semanticscience.org/resource/CHEMINF_000256",
- "title": "4.2 Melting point / freezing point"
- },
- "endpoint": "Melting Point",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Melting Point",
- "conditions": {
- "Decomposition": null,
- "Sublimation": null
- },
- "result": {
- "unit": "°C",
- "loQualifier": ">=",
- "loValue": 1600
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a9686fa8-19cc-4de9-afd1-bb66d50adc61.json b/test/data/enm/study-NWKI-a9686fa8-19cc-4de9-afd1-bb66d50adc61.json
deleted file mode 100644
index 7f25827..0000000
--- a/test/data/enm/study-NWKI-a9686fa8-19cc-4de9-afd1-bb66d50adc61.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-a9686fa8-19cc-4de9-afd1-bb66d50adc61",
- "owner": {
- "substance": {
- "uuid": "NWKI-ae0be5b8-266b-3b6a-825d-55f14b51cc99"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DArg7COOH"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PVA"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a970b210-1925-41f3-82ec-d1191c19ab22.json b/test/data/enm/study-NWKI-a970b210-1925-41f3-82ec-d1191c19ab22.json
deleted file mode 100644
index b8cf6cb..0000000
--- a/test/data/enm/study-NWKI-a970b210-1925-41f3-82ec-d1191c19ab22.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-a970b210-1925-41f3-82ec-d1191c19ab22",
- "owner": {
- "substance": {
- "uuid": "NWKI-c3d91296-7c2d-3971-b932-e671f2f83aa8"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 3.37,
- "errorValue": 0.57
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-a994fb96-60a5-4ad0-9cb9-c566c7f0a76e.json b/test/data/enm/study-NWKI-a994fb96-60a5-4ad0-9cb9-c566c7f0a76e.json
deleted file mode 100644
index 8aa1ed0..0000000
--- a/test/data/enm/study-NWKI-a994fb96-60a5-4ad0-9cb9-c566c7f0a76e.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-a994fb96-60a5-4ad0-9cb9-c566c7f0a76e",
- "owner": {
- "substance": {
- "uuid": "NWKI-4beee533-65e4-364a-adb7-7a520180de61"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 16
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-aa3dbdb7-90f5-43e1-9ece-29a5b0398e90.json b/test/data/enm/study-NWKI-aa3dbdb7-90f5-43e1-9ece-29a5b0398e90.json
deleted file mode 100644
index 1ea713d..0000000
--- a/test/data/enm/study-NWKI-aa3dbdb7-90f5-43e1-9ece-29a5b0398e90.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-aa3dbdb7-90f5-43e1-9ece-29a5b0398e90",
- "owner": {
- "substance": {
- "uuid": "NWKI-175ce512-1cbd-3a84-b216-dd0f47170dc8"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 16.6,
- "errorValue": 4.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-aac134d2-3527-441c-8e37-c873b418d489.json b/test/data/enm/study-NWKI-aac134d2-3527-441c-8e37-c873b418d489.json
deleted file mode 100644
index 640441c..0000000
--- a/test/data/enm/study-NWKI-aac134d2-3527-441c-8e37-c873b418d489.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-aac134d2-3527-441c-8e37-c873b418d489",
- "owner": {
- "substance": {
- "uuid": "NWKI-e5b618fd-dd48-3562-9a55-737ac7a68466"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DPEG-2DED-2DVT750"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "VT750"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "VT750"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-aacd1d5b-bbb1-4bfe-add2-1b616797b9c2.json b/test/data/enm/study-NWKI-aacd1d5b-bbb1-4bfe-add2-1b616797b9c2.json
deleted file mode 100644
index 5798795..0000000
--- a/test/data/enm/study-NWKI-aacd1d5b-bbb1-4bfe-add2-1b616797b9c2.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-aacd1d5b-bbb1-4bfe-add2-1b616797b9c2",
- "owner": {
- "substance": {
- "uuid": "NWKI-bb304faf-e44e-3103-b2a6-01b99c1c23de"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 23,
- "upQualifier": "<=",
- "upValue": 35
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ab95b96d-661a-4f2c-bc84-1483ee871d50.json b/test/data/enm/study-NWKI-ab95b96d-661a-4f2c-bc84-1483ee871d50.json
deleted file mode 100644
index 0c6f252..0000000
--- a/test/data/enm/study-NWKI-ab95b96d-661a-4f2c-bc84-1483ee871d50.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-ab95b96d-661a-4f2c-bc84-1483ee871d50",
- "owner": {
- "substance": {
- "uuid": "NWKI-3d8aaa66-97d9-351b-9771-691300d5e97c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Mean Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 267
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-aba213a3-9081-41d1-b925-cbcd874ee2d0.json b/test/data/enm/study-NWKI-aba213a3-9081-41d1-b925-cbcd874ee2d0.json
deleted file mode 100644
index da054ab..0000000
--- a/test/data/enm/study-NWKI-aba213a3-9081-41d1-b925-cbcd874ee2d0.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-aba213a3-9081-41d1-b925-cbcd874ee2d0",
- "owner": {
- "substance": {
- "uuid": "NWKI-90869553-c8fe-3ef6-8e68-47f392958127"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DCY55"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cy5.5"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cy5.5"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ac38b52d-7f93-49b6-be77-66198edb7492.json b/test/data/enm/study-NWKI-ac38b52d-7f93-49b6-be77-66198edb7492.json
deleted file mode 100644
index 1d942fb..0000000
--- a/test/data/enm/study-NWKI-ac38b52d-7f93-49b6-be77-66198edb7492.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-ac38b52d-7f93-49b6-be77-66198edb7492",
- "owner": {
- "substance": {
- "uuid": "NWKI-5a049bb7-380d-3c89-9c39-f1310ed7b09d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 5.3,
- "errorValue": 0.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ac5f75d2-be9e-4773-97d6-9d9219c5bb98.json b/test/data/enm/study-NWKI-ac5f75d2-be9e-4773-97d6-9d9219c5bb98.json
deleted file mode 100644
index b00a665..0000000
--- a/test/data/enm/study-NWKI-ac5f75d2-be9e-4773-97d6-9d9219c5bb98.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-ac5f75d2-be9e-4773-97d6-9d9219c5bb98",
- "owner": {
- "substance": {
- "uuid": "NWKI-e93603a1-8e0d-372a-8acf-48533b86ecb5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es051043o",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 250,
- "upQualifier": "<=",
- "upValue": 500
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ac60ab82-10f4-454a-908b-d3d0b94a5c3c.json b/test/data/enm/study-NWKI-ac60ab82-10f4-454a-908b-d3d0b94a5c3c.json
deleted file mode 100644
index 8736b09..0000000
--- a/test/data/enm/study-NWKI-ac60ab82-10f4-454a-908b-d3d0b94a5c3c.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-ac60ab82-10f4-454a-908b-d3d0b94a5c3c",
- "owner": {
- "substance": {
- "uuid": "NWKI-13acd41a-bbf5-362c-bb6e-54c26f4c5f73"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 71.8,
- "errorValue": 16.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ad183e8f-53b7-4139-82f6-bbd7a4948f4e.json b/test/data/enm/study-NWKI-ad183e8f-53b7-4139-82f6-bbd7a4948f4e.json
deleted file mode 100644
index feab4a5..0000000
--- a/test/data/enm/study-NWKI-ad183e8f-53b7-4139-82f6-bbd7a4948f4e.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-ad183e8f-53b7-4139-82f6-bbd7a4948f4e",
- "owner": {
- "substance": {
- "uuid": "NWKI-82bed004-9895-3bdf-822f-0b9906d2ee06"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -7.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ad5f29a5-b5f3-4195-8acf-3e90ea113eeb.json b/test/data/enm/study-NWKI-ad5f29a5-b5f3-4195-8acf-3e90ea113eeb.json
deleted file mode 100644
index 1a6f8c0..0000000
--- a/test/data/enm/study-NWKI-ad5f29a5-b5f3-4195-8acf-3e90ea113eeb.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-ad5f29a5-b5f3-4195-8acf-3e90ea113eeb",
- "owner": {
- "substance": {
- "uuid": "NWKI-458c2d5a-53f0-3c65-81eb-6fb5d128db59"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 6.2,
- "errorValue": 0.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ad69fbd5-3909-4d61-9db3-4e47619b7350.json b/test/data/enm/study-NWKI-ad69fbd5-3909-4d61-9db3-4e47619b7350.json
deleted file mode 100644
index 1e69ca6..0000000
--- a/test/data/enm/study-NWKI-ad69fbd5-3909-4d61-9db3-4e47619b7350.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-ad69fbd5-3909-4d61-9db3-4e47619b7350",
- "owner": {
- "substance": {
- "uuid": "NWKI-395bf212-b710-3385-9c23-715a7055b015"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002167_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002167",
- "title": "BAO_0002167 Genotoxicity Assay"
- },
- "endpoint": "DNA in Tail",
- "guideline": [
- "Fpg-2Dmodified Comet Assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Fpg-2Dmodified Comet Assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "DNA_in_Tail",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- },
- "FPG Content": {
- "loValue": 0
- }
- },
- "result": {
- "unit": "%",
- "loValue": 3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ae01c65a-e141-4a3e-997a-07068990a1ed.json b/test/data/enm/study-NWKI-ae01c65a-e141-4a3e-997a-07068990a1ed.json
deleted file mode 100644
index 3711eb4..0000000
--- a/test/data/enm/study-NWKI-ae01c65a-e141-4a3e-997a-07068990a1ed.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-ae01c65a-e141-4a3e-997a-07068990a1ed",
- "owner": {
- "substance": {
- "uuid": "NWKI-b14e37d1-8dbb-36d7-925c-4093c91a0e92"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 50,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ae4d3a55-5ea2-4964-bcc1-7f7b016aec31.json b/test/data/enm/study-NWKI-ae4d3a55-5ea2-4964-bcc1-7f7b016aec31.json
deleted file mode 100644
index 5e03968..0000000
--- a/test/data/enm/study-NWKI-ae4d3a55-5ea2-4964-bcc1-7f7b016aec31.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-ae4d3a55-5ea2-4964-bcc1-7f7b016aec31",
- "owner": {
- "substance": {
- "uuid": "NWKI-47d254de-8242-3374-9ed3-085227d473cc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe2O3"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe2O3"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DPEG-2DED-2DAminoSPARK680"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Amino_SPARK680"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Amino_SPARK680"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-af91a0ab-cd0a-4af2-9f08-5cbff02f2c02.json b/test/data/enm/study-NWKI-af91a0ab-cd0a-4af2-9f08-5cbff02f2c02.json
deleted file mode 100644
index 49230c0..0000000
--- a/test/data/enm/study-NWKI-af91a0ab-cd0a-4af2-9f08-5cbff02f2c02.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-af91a0ab-cd0a-4af2-9f08-5cbff02f2c02",
- "owner": {
- "substance": {
- "uuid": "NWKI-69b604fb-e892-31ba-a6f5-feb6cb04effb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 29
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-afaf9d66-7295-4597-b804-b1b6ff16380e.json b/test/data/enm/study-NWKI-afaf9d66-7295-4597-b804-b1b6ff16380e.json
deleted file mode 100644
index c8d8cb8..0000000
--- a/test/data/enm/study-NWKI-afaf9d66-7295-4597-b804-b1b6ff16380e.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-afaf9d66-7295-4597-b804-b1b6ff16380e",
- "owner": {
- "substance": {
- "uuid": "NWKI-6821e372-3b17-3a56-8fac-f66115f24e5d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Mean Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 47
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-afb4950b-8b6c-49aa-bf88-002590f9da09.json b/test/data/enm/study-NWKI-afb4950b-8b6c-49aa-bf88-002590f9da09.json
deleted file mode 100644
index a6f20ea..0000000
--- a/test/data/enm/study-NWKI-afb4950b-8b6c-49aa-bf88-002590f9da09.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-afb4950b-8b6c-49aa-bf88-002590f9da09",
- "owner": {
- "substance": {
- "uuid": "NWKI-7efe542f-264c-3b57-a516-410b730df963"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 33
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-afe3c4ca-7d1a-4d30-bff9-1a803f7664ec.json b/test/data/enm/study-NWKI-afe3c4ca-7d1a-4d30-bff9-1a803f7664ec.json
deleted file mode 100644
index 7c662d2..0000000
--- a/test/data/enm/study-NWKI-afe3c4ca-7d1a-4d30-bff9-1a803f7664ec.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-afe3c4ca-7d1a-4d30-bff9-1a803f7664ec",
- "owner": {
- "substance": {
- "uuid": "NWKI-cfea3b7c-ee39-34ef-8349-16b1e7825861"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DRhodamine-2DProtamine"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Rhodamine"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Rhodamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b0ec7163-0d6b-455d-ac0b-0b20289bd60a.json b/test/data/enm/study-NWKI-b0ec7163-0d6b-455d-ac0b-0b20289bd60a.json
deleted file mode 100644
index 4c9111e..0000000
--- a/test/data/enm/study-NWKI-b0ec7163-0d6b-455d-ac0b-0b20289bd60a.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-b0ec7163-0d6b-455d-ac0b-0b20289bd60a",
- "owner": {
- "substance": {
- "uuid": "NWKI-c6c08b6e-cb44-3e91-9669-0979667f12b3"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1063/1.2061873",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 30
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b163f566-9eeb-49fa-8a95-5cfcb0b308c3.json b/test/data/enm/study-NWKI-b163f566-9eeb-49fa-8a95-5cfcb0b308c3.json
deleted file mode 100644
index e6f2535..0000000
--- a/test/data/enm/study-NWKI-b163f566-9eeb-49fa-8a95-5cfcb0b308c3.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-b163f566-9eeb-49fa-8a95-5cfcb0b308c3",
- "owner": {
- "substance": {
- "uuid": "NWKI-21dbebfb-695f-3ff4-b7a4-bead2b52cf13"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 0.0,
- "upQualifier": "<=",
- "upValue": 50
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b19640e8-70fc-4f59-9673-18d993638b49.json b/test/data/enm/study-NWKI-b19640e8-70fc-4f59-9673-18d993638b49.json
deleted file mode 100644
index 2484a3b..0000000
--- a/test/data/enm/study-NWKI-b19640e8-70fc-4f59-9673-18d993638b49.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-b19640e8-70fc-4f59-9673-18d993638b49",
- "owner": {
- "substance": {
- "uuid": "NWKI-c4c91023-5b41-3d6d-bb4f-ee1152926be0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 2000,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 57
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b2410a3b-3566-4d20-b44d-26cc260aa5ba.json b/test/data/enm/study-NWKI-b2410a3b-3566-4d20-b44d-26cc260aa5ba.json
deleted file mode 100644
index 6d9e924..0000000
--- a/test/data/enm/study-NWKI-b2410a3b-3566-4d20-b44d-26cc260aa5ba.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-b2410a3b-3566-4d20-b44d-26cc260aa5ba",
- "owner": {
- "substance": {
- "uuid": "NWKI-77fb742b-c676-3ad7-bd19-6d5ec1df62ad"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 20,
- "upQualifier": "<=",
- "upValue": 60
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b253bb51-98c6-4542-ac49-1d4065642da9.json b/test/data/enm/study-NWKI-b253bb51-98c6-4542-ac49-1d4065642da9.json
deleted file mode 100644
index 4436bd6..0000000
--- a/test/data/enm/study-NWKI-b253bb51-98c6-4542-ac49-1d4065642da9.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-b253bb51-98c6-4542-ac49-1d4065642da9",
- "owner": {
- "substance": {
- "uuid": "NWKI-6b8a44a2-b835-3f75-903c-cf0a71a247c9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es051043o",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002993_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002993",
- "title": "BAO_0002993 Cytotoxicity Assay"
- },
- "endpoint": "Concentration in cell",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Concentration_in_cell",
- "conditions": {
- "Concentration in culture medium": {
- "loValue": 100,
- "unit": "ng/g"
- },
- "Time": {
- "loValue": 10,
- "unit": "m"
- }
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b2df0522-985f-4afe-b6c1-7d044f4606b9.json b/test/data/enm/study-NWKI-b2df0522-985f-4afe-b6c1-7d044f4606b9.json
deleted file mode 100644
index e01a491..0000000
--- a/test/data/enm/study-NWKI-b2df0522-985f-4afe-b6c1-7d044f4606b9.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-b2df0522-985f-4afe-b6c1-7d044f4606b9",
- "owner": {
- "substance": {
- "uuid": "NWKI-04962f10-34c8-3118-953e-d40d7244209c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1039/C4FD00117F",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "Å",
- "loQualifier": ">=",
- "loValue": 25,
- "upQualifier": "<=",
- "upValue": 30
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b2f8f2b7-15bf-4898-86c4-ab0157786afa.json b/test/data/enm/study-NWKI-b2f8f2b7-15bf-4898-86c4-ab0157786afa.json
deleted file mode 100644
index e5356e5..0000000
--- a/test/data/enm/study-NWKI-b2f8f2b7-15bf-4898-86c4-ab0157786afa.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-b2f8f2b7-15bf-4898-86c4-ab0157786afa",
- "owner": {
- "substance": {
- "uuid": "NWKI-3db8eb74-b206-31ad-8c1b-3569703c47cb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 6,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 4
- }
- },
- "result": {
- "unit": null,
- "loValue": 98
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b31df475-cec5-45fb-a010-e2af8524f5bd.json b/test/data/enm/study-NWKI-b31df475-cec5-45fb-a010-e2af8524f5bd.json
deleted file mode 100644
index 414f209..0000000
--- a/test/data/enm/study-NWKI-b31df475-cec5-45fb-a010-e2af8524f5bd.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-b31df475-cec5-45fb-a010-e2af8524f5bd",
- "owner": {
- "substance": {
- "uuid": "NWKI-56d49cc3-4a76-354b-9a77-4b2ecb2dbef0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Metabolic Activity",
- "guideline": [
- "Tetrazolium Salt Cleavage"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Tetrazolium Salt Cleavage"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Metabolic_Activity",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b3232f4d-a5ce-403b-8389-ab510c2a4fa5.json b/test/data/enm/study-NWKI-b3232f4d-a5ce-403b-8389-ab510c2a4fa5.json
deleted file mode 100644
index 3236c2d..0000000
--- a/test/data/enm/study-NWKI-b3232f4d-a5ce-403b-8389-ab510c2a4fa5.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-b3232f4d-a5ce-403b-8389-ab510c2a4fa5",
- "owner": {
- "substance": {
- "uuid": "NWKI-b6c86895-1b73-39ec-8bd2-0106e77a7673"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DAF488"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b344319c-0fd1-40f5-b99d-5d63247257d2.json b/test/data/enm/study-NWKI-b344319c-0fd1-40f5-b99d-5d63247257d2.json
deleted file mode 100644
index d6bb205..0000000
--- a/test/data/enm/study-NWKI-b344319c-0fd1-40f5-b99d-5d63247257d2.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-b344319c-0fd1-40f5-b99d-5d63247257d2",
- "owner": {
- "substance": {
- "uuid": "NWKI-8a968835-50ab-33df-bf5e-42de32d01c15"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Colon HT29",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 60,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 8
- }
- },
- "result": {
- "unit": null,
- "loValue": 100
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b3e40d3a-a564-42ef-8200-bd7d9836dda1.json b/test/data/enm/study-NWKI-b3e40d3a-a564-42ef-8200-bd7d9836dda1.json
deleted file mode 100644
index f12028b..0000000
--- a/test/data/enm/study-NWKI-b3e40d3a-a564-42ef-8200-bd7d9836dda1.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-b3e40d3a-a564-42ef-8200-bd7d9836dda1",
- "owner": {
- "substance": {
- "uuid": "NWKI-c3d91296-7c2d-3971-b932-e671f2f83aa8"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": 57.4,
- "errorValue": 16.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b415c8a0-b36e-4872-a113-e47e49172f57.json b/test/data/enm/study-NWKI-b415c8a0-b36e-4872-a113-e47e49172f57.json
deleted file mode 100644
index 458c0e4..0000000
--- a/test/data/enm/study-NWKI-b415c8a0-b36e-4872-a113-e47e49172f57.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-b415c8a0-b36e-4872-a113-e47e49172f57",
- "owner": {
- "substance": {
- "uuid": "NWKI-db562080-5286-327a-b813-6775c437385e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DFITC-2DRCOOH"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "FITC"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "FITC"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b47b3bb8-8641-4c6a-b225-19d76714e4f9.json b/test/data/enm/study-NWKI-b47b3bb8-8641-4c6a-b225-19d76714e4f9.json
deleted file mode 100644
index 79e637d..0000000
--- a/test/data/enm/study-NWKI-b47b3bb8-8641-4c6a-b225-19d76714e4f9.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-b47b3bb8-8641-4c6a-b225-19d76714e4f9",
- "owner": {
- "substance": {
- "uuid": "NWKI-99ad0a8c-1c4b-3270-8a4b-7dab013e5fe8"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 61.7,
- "errorValue": 11.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b4ab83bc-2f09-4aee-8e13-71525a8208ac.json b/test/data/enm/study-NWKI-b4ab83bc-2f09-4aee-8e13-71525a8208ac.json
deleted file mode 100644
index 909a060..0000000
--- a/test/data/enm/study-NWKI-b4ab83bc-2f09-4aee-8e13-71525a8208ac.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-b4ab83bc-2f09-4aee-8e13-71525a8208ac",
- "owner": {
- "substance": {
- "uuid": "NWKI-88767671-5631-3c93-8cfc-db0f48978e77"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.87
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b4caa096-20f9-4b80-a35a-4db2789b3d8c.json b/test/data/enm/study-NWKI-b4caa096-20f9-4b80-a35a-4db2789b3d8c.json
deleted file mode 100644
index a1995a2..0000000
--- a/test/data/enm/study-NWKI-b4caa096-20f9-4b80-a35a-4db2789b3d8c.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-b4caa096-20f9-4b80-a35a-4db2789b3d8c",
- "owner": {
- "substance": {
- "uuid": "NWKI-9a13f473-8a29-32e4-9653-ec03f5fb8923"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "AmphPolymer-2DPEG"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PEG"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PEG"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b4d22e0f-9803-4c59-8a3e-473f3c1af41b.json b/test/data/enm/study-NWKI-b4d22e0f-9803-4c59-8a3e-473f3c1af41b.json
deleted file mode 100644
index 7c41c8e..0000000
--- a/test/data/enm/study-NWKI-b4d22e0f-9803-4c59-8a3e-473f3c1af41b.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-b4d22e0f-9803-4c59-8a3e-473f3c1af41b",
- "owner": {
- "substance": {
- "uuid": "NWKI-f9f316e8-e8a9-37f9-877f-86519b3af20e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b4fed1d0-a43c-4482-8433-cd0a24220095.json b/test/data/enm/study-NWKI-b4fed1d0-a43c-4482-8433-cd0a24220095.json
deleted file mode 100644
index 2716c67..0000000
--- a/test/data/enm/study-NWKI-b4fed1d0-a43c-4482-8433-cd0a24220095.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "uuid": "NWKI-b4fed1d0-a43c-4482-8433-cd0a24220095",
- "owner": {
- "substance": {
- "uuid": "NWKI-c7bee4e3-8884-3e29-ad8b-38decf6146fd"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "FITC-2DCOOH"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "COOH"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "O=CO[H]"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "COOH"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b5028307-f5a7-43ee-9f16-9056ef54bb8b.json b/test/data/enm/study-NWKI-b5028307-f5a7-43ee-9f16-9056ef54bb8b.json
deleted file mode 100644
index 3fd131e..0000000
--- a/test/data/enm/study-NWKI-b5028307-f5a7-43ee-9f16-9056ef54bb8b.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-b5028307-f5a7-43ee-9f16-9056ef54bb8b",
- "owner": {
- "substance": {
- "uuid": "NWKI-2076c0ac-9601-33fb-a221-cd3055fd9b42"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.envpol.2008.11.004",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 50
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b51e63f2-de24-4b10-838d-be0de2f1e0e1.json b/test/data/enm/study-NWKI-b51e63f2-de24-4b10-838d-be0de2f1e0e1.json
deleted file mode 100644
index 8f43272..0000000
--- a/test/data/enm/study-NWKI-b51e63f2-de24-4b10-838d-be0de2f1e0e1.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-b51e63f2-de24-4b10-838d-be0de2f1e0e1",
- "owner": {
- "substance": {
- "uuid": "NWKI-395bf212-b710-3385-9c23-715a7055b015"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "LDH Release",
- "guideline": [
- "Lactate Dehydrogenase Activity"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Lactate Dehydrogenase Activity"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "LDH_Release",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 80,
- "unit": "ug/cm^2"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b559c4ad-cf60-4602-aab1-088948542e00.json b/test/data/enm/study-NWKI-b559c4ad-cf60-4602-aab1-088948542e00.json
deleted file mode 100644
index 9cb3fad..0000000
--- a/test/data/enm/study-NWKI-b559c4ad-cf60-4602-aab1-088948542e00.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-b559c4ad-cf60-4602-aab1-088948542e00",
- "owner": {
- "substance": {
- "uuid": "NWKI-7cbc5266-5c2e-3821-a80a-5d6a63140d83"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -48.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b5704215-4ac0-4d41-b185-53fe8b5747d7.json b/test/data/enm/study-NWKI-b5704215-4ac0-4d41-b185-53fe8b5747d7.json
deleted file mode 100644
index 85c7553..0000000
--- a/test/data/enm/study-NWKI-b5704215-4ac0-4d41-b185-53fe8b5747d7.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-b5704215-4ac0-4d41-b185-53fe8b5747d7",
- "owner": {
- "substance": {
- "uuid": "NWKI-3424add5-867e-3dc5-864d-36c47589024b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "SiO2"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "SiO2"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "APS_Coating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "APS"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "APS"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b595fad5-c9e5-42a3-902f-261561ea55c2.json b/test/data/enm/study-NWKI-b595fad5-c9e5-42a3-902f-261561ea55c2.json
deleted file mode 100644
index 8fe57f4..0000000
--- a/test/data/enm/study-NWKI-b595fad5-c9e5-42a3-902f-261561ea55c2.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-b595fad5-c9e5-42a3-902f-261561ea55c2",
- "owner": {
- "substance": {
- "uuid": "NWKI-8f7f774c-d727-33a9-adc6-9068524faf1c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DFITC-2DCOOH"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b5d5c844-25e0-4df7-9855-4d18f205938b.json b/test/data/enm/study-NWKI-b5d5c844-25e0-4df7-9855-4d18f205938b.json
deleted file mode 100644
index 99fa9cd..0000000
--- a/test/data/enm/study-NWKI-b5d5c844-25e0-4df7-9855-4d18f205938b.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-b5d5c844-25e0-4df7-9855-4d18f205938b",
- "owner": {
- "substance": {
- "uuid": "NWKI-ae67096a-fca6-3afc-bade-c362e3eeadc8"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn202116p",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 889,
- "errorValue": 32
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b60c415e-42fc-4af0-907e-ec6d3d07aebf.json b/test/data/enm/study-NWKI-b60c415e-42fc-4af0-907e-ec6d3d07aebf.json
deleted file mode 100644
index 57e32e5..0000000
--- a/test/data/enm/study-NWKI-b60c415e-42fc-4af0-907e-ec6d3d07aebf.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-b60c415e-42fc-4af0-907e-ec6d3d07aebf",
- "owner": {
- "substance": {
- "uuid": "NWKI-395bf212-b710-3385-9c23-715a7055b015"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Metabolic Activity",
- "guideline": [
- "Tetrazolium Salt Cleavage"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Tetrazolium Salt Cleavage"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Metabolic_Activity",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 80
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b6ad5d66-dd21-4d69-ba96-ae4e2623a8a0.json b/test/data/enm/study-NWKI-b6ad5d66-dd21-4d69-ba96-ae4e2623a8a0.json
deleted file mode 100644
index f3d36ce..0000000
--- a/test/data/enm/study-NWKI-b6ad5d66-dd21-4d69-ba96-ae4e2623a8a0.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-b6ad5d66-dd21-4d69-ba96-ae4e2623a8a0",
- "owner": {
- "substance": {
- "uuid": "NWKI-c012600e-ca8e-31db-a7a8-d9f6a74e2464"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Isoelectric Point",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ISOELECTRIC POINT",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": 6.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b6ed421d-8819-43ca-b207-0adf297e57bc.json b/test/data/enm/study-NWKI-b6ed421d-8819-43ca-b207-0adf297e57bc.json
deleted file mode 100644
index c8936c5..0000000
--- a/test/data/enm/study-NWKI-b6ed421d-8819-43ca-b207-0adf297e57bc.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-b6ed421d-8819-43ca-b207-0adf297e57bc",
- "owner": {
- "substance": {
- "uuid": "NWKI-b6c86895-1b73-39ec-8bd2-0106e77a7673"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -3.34
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b6f7f4d3-684a-44c0-b32d-34be02d1b364.json b/test/data/enm/study-NWKI-b6f7f4d3-684a-44c0-b32d-34be02d1b364.json
deleted file mode 100644
index d71d108..0000000
--- a/test/data/enm/study-NWKI-b6f7f4d3-684a-44c0-b32d-34be02d1b364.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-b6f7f4d3-684a-44c0-b32d-34be02d1b364",
- "owner": {
- "substance": {
- "uuid": "NWKI-8a968835-50ab-33df-bf5e-42de32d01c15"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Colon HT29",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 600,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 8
- }
- },
- "result": {
- "unit": null,
- "loValue": 100
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b722b764-aa2b-4c82-b3d1-3f2f29fe9b59.json b/test/data/enm/study-NWKI-b722b764-aa2b-4c82-b3d1-3f2f29fe9b59.json
deleted file mode 100644
index dba8a73..0000000
--- a/test/data/enm/study-NWKI-b722b764-aa2b-4c82-b3d1-3f2f29fe9b59.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-b722b764-aa2b-4c82-b3d1-3f2f29fe9b59",
- "owner": {
- "substance": {
- "uuid": "NWKI-e4dab3d9-2699-3a0b-9e9c-f257088142cc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 50,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b729c58e-a905-4e14-9074-3ee8e20d202c.json b/test/data/enm/study-NWKI-b729c58e-a905-4e14-9074-3ee8e20d202c.json
deleted file mode 100644
index 2ac5bcc..0000000
--- a/test/data/enm/study-NWKI-b729c58e-a905-4e14-9074-3ee8e20d202c.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-b729c58e-a905-4e14-9074-3ee8e20d202c",
- "owner": {
- "substance": {
- "uuid": "NWKI-916751bb-8457-3844-87c0-ada4c6afd1ab"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null,
- "Serum": {
- "loValue": "sfMEM"
- }
- },
- "result": {
- "unit": "nm",
- "loValue": 65
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b73daa7d-227f-4a0c-b2c1-8b2515f43582.json b/test/data/enm/study-NWKI-b73daa7d-227f-4a0c-b2c1-8b2515f43582.json
deleted file mode 100644
index 35dfc64..0000000
--- a/test/data/enm/study-NWKI-b73daa7d-227f-4a0c-b2c1-8b2515f43582.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-b73daa7d-227f-4a0c-b2c1-8b2515f43582",
- "owner": {
- "substance": {
- "uuid": "NWKI-69fa9265-308d-30c5-9d86-1f18cde14afb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.envpol.2008.11.004",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 429
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b7848f87-76a4-4f51-a7f3-cfa1668b2670.json b/test/data/enm/study-NWKI-b7848f87-76a4-4f51-a7f3-cfa1668b2670.json
deleted file mode 100644
index bbaf1b7..0000000
--- a/test/data/enm/study-NWKI-b7848f87-76a4-4f51-a7f3-cfa1668b2670.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-b7848f87-76a4-4f51-a7f3-cfa1668b2670",
- "owner": {
- "substance": {
- "uuid": "NWKI-fd891814-04d2-30bc-a0b6-cc3149bf75ec"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Isoelectric Point",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ISOELECTRIC POINT",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": 5.6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b7d6c2a9-87d5-4648-b79a-872ca7706802.json b/test/data/enm/study-NWKI-b7d6c2a9-87d5-4648-b79a-872ca7706802.json
deleted file mode 100644
index b5af5e8..0000000
--- a/test/data/enm/study-NWKI-b7d6c2a9-87d5-4648-b79a-872ca7706802.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-b7d6c2a9-87d5-4648-b79a-872ca7706802",
- "owner": {
- "substance": {
- "uuid": "NWKI-d8f70c6c-3496-3ad3-8ab3-e4f08a178d30"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 1000,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 93
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b81bcb58-126e-40d3-b4ea-3b7d613f7e1e.json b/test/data/enm/study-NWKI-b81bcb58-126e-40d3-b4ea-3b7d613f7e1e.json
deleted file mode 100644
index 1e54fdf..0000000
--- a/test/data/enm/study-NWKI-b81bcb58-126e-40d3-b4ea-3b7d613f7e1e.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-b81bcb58-126e-40d3-b4ea-3b7d613f7e1e",
- "owner": {
- "substance": {
- "uuid": "NWKI-155bb96c-2d7e-384d-b55d-45856eeda386"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 15,
- "upQualifier": "<=",
- "upValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b82cf2e9-5da7-4c35-8014-ecb154a3639b.json b/test/data/enm/study-NWKI-b82cf2e9-5da7-4c35-8014-ecb154a3639b.json
deleted file mode 100644
index 27e8ac7..0000000
--- a/test/data/enm/study-NWKI-b82cf2e9-5da7-4c35-8014-ecb154a3639b.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-b82cf2e9-5da7-4c35-8014-ecb154a3639b",
- "owner": {
- "substance": {
- "uuid": "NWKI-19b5dfef-0d95-3878-9075-2897e8631277"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3390/ijerph110908867",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "TEM",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 18,
- "errorValue": 3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b8bdb816-6822-4cfb-b0db-d775259ada5b.json b/test/data/enm/study-NWKI-b8bdb816-6822-4cfb-b0db-d775259ada5b.json
deleted file mode 100644
index 5f8e3df..0000000
--- a/test/data/enm/study-NWKI-b8bdb816-6822-4cfb-b0db-d775259ada5b.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-b8bdb816-6822-4cfb-b0db-d775259ada5b",
- "owner": {
- "substance": {
- "uuid": "NWKI-7680f6c2-68d8-3ee4-b84b-8107da3f6e19"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -18.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b8f2a16e-05cf-41e5-b61e-8a1be9cf8691.json b/test/data/enm/study-NWKI-b8f2a16e-05cf-41e5-b61e-8a1be9cf8691.json
deleted file mode 100644
index 56a51f3..0000000
--- a/test/data/enm/study-NWKI-b8f2a16e-05cf-41e5-b61e-8a1be9cf8691.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "uuid": "NWKI-b8f2a16e-05cf-41e5-b61e-8a1be9cf8691",
- "owner": {
- "substance": {
- "uuid": "NWKI-072b1631-f6f1-3f47-a4dc-723aa4eb0700"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Ag"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Ag"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "MEECoating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "MEE"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "SCCOCCO"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "MEE"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b92935a2-e18a-4a51-a6a8-92961b6153a7.json b/test/data/enm/study-NWKI-b92935a2-e18a-4a51-a6a8-92961b6153a7.json
deleted file mode 100644
index e9b65b0..0000000
--- a/test/data/enm/study-NWKI-b92935a2-e18a-4a51-a6a8-92961b6153a7.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-b92935a2-e18a-4a51-a6a8-92961b6153a7",
- "owner": {
- "substance": {
- "uuid": "NWKI-d42892b8-9b57-30a2-aa89-af61880c337a"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -0.877
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b9477bfc-dc2b-4ea2-aee9-528395dfeeee.json b/test/data/enm/study-NWKI-b9477bfc-dc2b-4ea2-aee9-528395dfeeee.json
deleted file mode 100644
index fcce753..0000000
--- a/test/data/enm/study-NWKI-b9477bfc-dc2b-4ea2-aee9-528395dfeeee.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-b9477bfc-dc2b-4ea2-aee9-528395dfeeee",
- "owner": {
- "substance": {
- "uuid": "NWKI-d7e38d71-0fcb-3a23-8cbe-aae4ce82b33a"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -56,
- "errorValue": 10.9
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b9676734-2d7d-4cf5-85ea-4002591b618a.json b/test/data/enm/study-NWKI-b9676734-2d7d-4cf5-85ea-4002591b618a.json
deleted file mode 100644
index e666087..0000000
--- a/test/data/enm/study-NWKI-b9676734-2d7d-4cf5-85ea-4002591b618a.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "NWKI-b9676734-2d7d-4cf5-85ea-4002591b618a",
- "owner": {
- "substance": {
- "uuid": "NWKI-5172b34a-a6f6-398f-ace6-1d30e6bc9efa"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DNH2"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "NH2"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "[H]N[H]"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "NH2"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b97b0b06-7f24-4f70-8b99-fa7db4806950.json b/test/data/enm/study-NWKI-b97b0b06-7f24-4f70-8b99-fa7db4806950.json
deleted file mode 100644
index 5561fb1..0000000
--- a/test/data/enm/study-NWKI-b97b0b06-7f24-4f70-8b99-fa7db4806950.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-b97b0b06-7f24-4f70-8b99-fa7db4806950",
- "owner": {
- "substance": {
- "uuid": "NWKI-0455b6e1-5203-37bb-a98b-20460acceda1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
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- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DCY35-2DTat"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b9a32c67-76d3-431b-b2a4-aa4dabc27537.json b/test/data/enm/study-NWKI-b9a32c67-76d3-431b-b2a4-aa4dabc27537.json
deleted file mode 100644
index d761458..0000000
--- a/test/data/enm/study-NWKI-b9a32c67-76d3-431b-b2a4-aa4dabc27537.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-b9a32c67-76d3-431b-b2a4-aa4dabc27537",
- "owner": {
- "substance": {
- "uuid": "NWKI-d47026e9-f0f9-3080-8eca-d2b7fd66d261"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.envpol.2008.11.004",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b9e19cf2-74b1-4293-a8ed-9dfc47833398.json b/test/data/enm/study-NWKI-b9e19cf2-74b1-4293-a8ed-9dfc47833398.json
deleted file mode 100644
index fa472f8..0000000
--- a/test/data/enm/study-NWKI-b9e19cf2-74b1-4293-a8ed-9dfc47833398.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-b9e19cf2-74b1-4293-a8ed-9dfc47833398",
- "owner": {
- "substance": {
- "uuid": "NWKI-6b07ffd5-b573-3889-a64c-ae7cc99ff977"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 27
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-b9ed5cb5-983c-4c0a-af8f-7af2afb81e7d.json b/test/data/enm/study-NWKI-b9ed5cb5-983c-4c0a-af8f-7af2afb81e7d.json
deleted file mode 100644
index e73be9b..0000000
--- a/test/data/enm/study-NWKI-b9ed5cb5-983c-4c0a-af8f-7af2afb81e7d.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-b9ed5cb5-983c-4c0a-af8f-7af2afb81e7d",
- "owner": {
- "substance": {
- "uuid": "NWKI-13b28611-c05b-325b-9e60-182c49b2a288"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es051043o",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002993_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002993",
- "title": "BAO_0002993 Cytotoxicity Assay"
- },
- "endpoint": "Concentration in cell",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Concentration_in_cell",
- "conditions": {
- "Concentration in culture medium": {
- "loValue": 100,
- "unit": "ng/g"
- },
- "Time": {
- "loValue": 10,
- "unit": "m"
- }
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ba3469fb-e14c-482e-8b8a-8d84e92c02ea.json b/test/data/enm/study-NWKI-ba3469fb-e14c-482e-8b8a-8d84e92c02ea.json
deleted file mode 100644
index f70d25a..0000000
--- a/test/data/enm/study-NWKI-ba3469fb-e14c-482e-8b8a-8d84e92c02ea.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-ba3469fb-e14c-482e-8b8a-8d84e92c02ea",
- "owner": {
- "substance": {
- "uuid": "NWKI-b5385309-1812-33ad-a4cf-66d8d3a26bcc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 14.2,
- "errorValue": 1.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-bb1d9e70-67eb-4f36-af0d-1e150743f576.json b/test/data/enm/study-NWKI-bb1d9e70-67eb-4f36-af0d-1e150743f576.json
deleted file mode 100644
index ebf9fd4..0000000
--- a/test/data/enm/study-NWKI-bb1d9e70-67eb-4f36-af0d-1e150743f576.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-bb1d9e70-67eb-4f36-af0d-1e150743f576",
- "owner": {
- "substance": {
- "uuid": "NWKI-d8f70c6c-3496-3ad3-8ab3-e4f08a178d30"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 10,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 98
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-bb3415eb-1dba-4325-baff-417320e89afb.json b/test/data/enm/study-NWKI-bb3415eb-1dba-4325-baff-417320e89afb.json
deleted file mode 100644
index c44a7ac..0000000
--- a/test/data/enm/study-NWKI-bb3415eb-1dba-4325-baff-417320e89afb.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-bb3415eb-1dba-4325-baff-417320e89afb",
- "owner": {
- "substance": {
- "uuid": "NWKI-202b322d-51c9-3d73-a049-1e4019f8ddad"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -53.5,
- "errorValue": 10.6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-bb3b0f78-9209-45ee-8a5d-03c0342b1fa7.json b/test/data/enm/study-NWKI-bb3b0f78-9209-45ee-8a5d-03c0342b1fa7.json
deleted file mode 100644
index ee6ceaa..0000000
--- a/test/data/enm/study-NWKI-bb3b0f78-9209-45ee-8a5d-03c0342b1fa7.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-bb3b0f78-9209-45ee-8a5d-03c0342b1fa7",
- "owner": {
- "substance": {
- "uuid": "NWKI-dd085452-8fd2-3025-a64f-2784fdf17879"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1039/C4FD00117F",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "Å",
- "loQualifier": ">=",
- "loValue": 25,
- "upQualifier": "<=",
- "upValue": 30
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-bc0e2bcb-b5f0-4b5e-b0a0-f5151c353825.json b/test/data/enm/study-NWKI-bc0e2bcb-b5f0-4b5e-b0a0-f5151c353825.json
deleted file mode 100644
index 717c750..0000000
--- a/test/data/enm/study-NWKI-bc0e2bcb-b5f0-4b5e-b0a0-f5151c353825.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-bc0e2bcb-b5f0-4b5e-b0a0-f5151c353825",
- "owner": {
- "substance": {
- "uuid": "NWKI-e866549e-38cf-3b98-a0b1-a483e275d261"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1080/10934520600966177",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "Shape",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Gamma phase"
- },
- "effects": [
- {
- "endpoint": "SHAPE",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": null,
- "textValue": "Gamma phase"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-bc3086e8-cb66-4c29-9f6e-156525fad6d1.json b/test/data/enm/study-NWKI-bc3086e8-cb66-4c29-9f6e-156525fad6d1.json
deleted file mode 100644
index 1590cba..0000000
--- a/test/data/enm/study-NWKI-bc3086e8-cb66-4c29-9f6e-156525fad6d1.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-bc3086e8-cb66-4c29-9f6e-156525fad6d1",
- "owner": {
- "substance": {
- "uuid": "NWKI-c4c91023-5b41-3d6d-bb4f-ee1152926be0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 250,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-bc3de50b-f2a1-42c1-b4b5-a180e292b177.json b/test/data/enm/study-NWKI-bc3de50b-f2a1-42c1-b4b5-a180e292b177.json
deleted file mode 100644
index ec314e2..0000000
--- a/test/data/enm/study-NWKI-bc3de50b-f2a1-42c1-b4b5-a180e292b177.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-bc3de50b-f2a1-42c1-b4b5-a180e292b177",
- "owner": {
- "substance": {
- "uuid": "NWKI-db562080-5286-327a-b813-6775c437385e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -10.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-bc486e1b-f68b-4911-a4af-990994e8fd72.json b/test/data/enm/study-NWKI-bc486e1b-f68b-4911-a4af-990994e8fd72.json
deleted file mode 100644
index f4c50c8..0000000
--- a/test/data/enm/study-NWKI-bc486e1b-f68b-4911-a4af-990994e8fd72.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-bc486e1b-f68b-4911-a4af-990994e8fd72",
- "owner": {
- "substance": {
- "uuid": "NWKI-e4dab3d9-2699-3a0b-9e9c-f257088142cc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 25,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-bcf835c5-7b6d-4dd4-99a9-318d9b5b4e90.json b/test/data/enm/study-NWKI-bcf835c5-7b6d-4dd4-99a9-318d9b5b4e90.json
deleted file mode 100644
index 30e5d1f..0000000
--- a/test/data/enm/study-NWKI-bcf835c5-7b6d-4dd4-99a9-318d9b5b4e90.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-bcf835c5-7b6d-4dd4-99a9-318d9b5b4e90",
- "owner": {
- "substance": {
- "uuid": "NWKI-3db8eb74-b206-31ad-8c1b-3569703c47cb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "TEM",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 109.8,
- "errorValue": 34.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-bd297302-a9f6-4bc6-ab88-1ba058356fd3.json b/test/data/enm/study-NWKI-bd297302-a9f6-4bc6-ab88-1ba058356fd3.json
deleted file mode 100644
index 963e531..0000000
--- a/test/data/enm/study-NWKI-bd297302-a9f6-4bc6-ab88-1ba058356fd3.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-bd297302-a9f6-4bc6-ab88-1ba058356fd3",
- "owner": {
- "substance": {
- "uuid": "NWKI-4b4cb369-8202-3483-9220-553e433c9159"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-bd4d124b-86d8-4a04-ba5a-cb9e28ddf28a.json b/test/data/enm/study-NWKI-bd4d124b-86d8-4a04-ba5a-cb9e28ddf28a.json
deleted file mode 100644
index 1dac876..0000000
--- a/test/data/enm/study-NWKI-bd4d124b-86d8-4a04-ba5a-cb9e28ddf28a.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-bd4d124b-86d8-4a04-ba5a-cb9e28ddf28a",
- "owner": {
- "substance": {
- "uuid": "NWKI-9142c528-4a84-3566-b678-dc1eef7d22fe"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 60
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-be9f2ae3-be0e-402f-a6ba-5aada4c4c956.json b/test/data/enm/study-NWKI-be9f2ae3-be0e-402f-a6ba-5aada4c4c956.json
deleted file mode 100644
index f4575ce..0000000
--- a/test/data/enm/study-NWKI-be9f2ae3-be0e-402f-a6ba-5aada4c4c956.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-be9f2ae3-be0e-402f-a6ba-5aada4c4c956",
- "owner": {
- "substance": {
- "uuid": "NWKI-cad5bf58-cc90-33e5-88bb-bad4c9f9fe9e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DCY5"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cy5"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cy5"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-bf2c9635-9a3d-4781-bca7-3c1f86ea0cba.json b/test/data/enm/study-NWKI-bf2c9635-9a3d-4781-bca7-3c1f86ea0cba.json
deleted file mode 100644
index 04a0a48..0000000
--- a/test/data/enm/study-NWKI-bf2c9635-9a3d-4781-bca7-3c1f86ea0cba.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "NWKI-bf2c9635-9a3d-4781-bca7-3c1f86ea0cba",
- "owner": {
- "substance": {
- "uuid": "NWKI-37a99dad-2a53-3076-b21f-d078b89fb4fb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn301622h",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 7
- }
- },
- "result": {
- "unit": "mV",
- "loValue": 12,
- "errorValue": 2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-bf93fd51-2b80-4693-9538-e973ec01fdd2.json b/test/data/enm/study-NWKI-bf93fd51-2b80-4693-9538-e973ec01fdd2.json
deleted file mode 100644
index 580d138..0000000
--- a/test/data/enm/study-NWKI-bf93fd51-2b80-4693-9538-e973ec01fdd2.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-bf93fd51-2b80-4693-9538-e973ec01fdd2",
- "owner": {
- "substance": {
- "uuid": "NWKI-8a968835-50ab-33df-bf5e-42de32d01c15"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Colon HT29",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 60,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 4
- }
- },
- "result": {
- "unit": null,
- "loValue": 102
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-bfe29db1-dc25-4f4d-8f01-2dc81a86c3ed.json b/test/data/enm/study-NWKI-bfe29db1-dc25-4f4d-8f01-2dc81a86c3ed.json
deleted file mode 100644
index 3995122..0000000
--- a/test/data/enm/study-NWKI-bfe29db1-dc25-4f4d-8f01-2dc81a86c3ed.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-bfe29db1-dc25-4f4d-8f01-2dc81a86c3ed",
- "owner": {
- "substance": {
- "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Colon HT29",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 6,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 24
- }
- },
- "result": {
- "unit": null,
- "loValue": 102
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c00c3206-3fd1-4ed3-a9f7-4b1374927387.json b/test/data/enm/study-NWKI-c00c3206-3fd1-4ed3-a9f7-4b1374927387.json
deleted file mode 100644
index 1b9dc54..0000000
--- a/test/data/enm/study-NWKI-c00c3206-3fd1-4ed3-a9f7-4b1374927387.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-c00c3206-3fd1-4ed3-a9f7-4b1374927387",
- "owner": {
- "substance": {
- "uuid": "NWKI-438d1468-d5d7-3977-9dab-15a3a05add38"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "LDH Release",
- "guideline": [
- "Lactate Dehydrogenase Activity"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Lactate Dehydrogenase Activity"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "LDH_Release",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c0ad98c0-9298-490c-ae70-a1a9a015d197.json b/test/data/enm/study-NWKI-c0ad98c0-9298-490c-ae70-a1a9a015d197.json
deleted file mode 100644
index dd4d0a6..0000000
--- a/test/data/enm/study-NWKI-c0ad98c0-9298-490c-ae70-a1a9a015d197.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-c0ad98c0-9298-490c-ae70-a1a9a015d197",
- "owner": {
- "substance": {
- "uuid": "NWKI-e0386856-5e55-330a-9b5e-364c00de2f2b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 12.3,
- "errorValue": 2.9
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c0b96f94-f4be-4ef2-8626-e84110817c99.json b/test/data/enm/study-NWKI-c0b96f94-f4be-4ef2-8626-e84110817c99.json
deleted file mode 100644
index 034e306..0000000
--- a/test/data/enm/study-NWKI-c0b96f94-f4be-4ef2-8626-e84110817c99.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "uuid": "NWKI-c0b96f94-f4be-4ef2-8626-e84110817c99",
- "owner": {
- "substance": {
- "uuid": "NWKI-8f7f774c-d727-33a9-adc6-9068524faf1c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DFITC-2DCOOH"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "COOH"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "O=CO[H]"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "COOH"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c0c037fe-f4fb-4abc-9969-0dc3e4006d91.json b/test/data/enm/study-NWKI-c0c037fe-f4fb-4abc-9969-0dc3e4006d91.json
deleted file mode 100644
index 88332db..0000000
--- a/test/data/enm/study-NWKI-c0c037fe-f4fb-4abc-9969-0dc3e4006d91.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-c0c037fe-f4fb-4abc-9969-0dc3e4006d91",
- "owner": {
- "substance": {
- "uuid": "NWKI-5ae4ae3d-db28-3647-9a7a-0c2e3d8076aa"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 20,
- "upQualifier": "<=",
- "upValue": 60
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c0ef8f7c-d2d0-4048-ac36-008db15fd81c.json b/test/data/enm/study-NWKI-c0ef8f7c-d2d0-4048-ac36-008db15fd81c.json
deleted file mode 100644
index d4ff1ed..0000000
--- a/test/data/enm/study-NWKI-c0ef8f7c-d2d0-4048-ac36-008db15fd81c.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-c0ef8f7c-d2d0-4048-ac36-008db15fd81c",
- "owner": {
- "substance": {
- "uuid": "NWKI-895a506b-c331-3576-bf9e-cbcde5822c11"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null,
- "Serum": {
- "loValue": "cMEM"
- }
- },
- "result": {
- "unit": "nm",
- "loValue": 81
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c1234f21-498a-475e-872e-24a5202362ab.json b/test/data/enm/study-NWKI-c1234f21-498a-475e-872e-24a5202362ab.json
deleted file mode 100644
index 2a52279..0000000
--- a/test/data/enm/study-NWKI-c1234f21-498a-475e-872e-24a5202362ab.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-c1234f21-498a-475e-872e-24a5202362ab",
- "owner": {
- "substance": {
- "uuid": "NWKI-b14e37d1-8dbb-36d7-925c-4093c91a0e92"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 25,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c1478b66-7fc6-4181-ad1e-cb95b0d84dca.json b/test/data/enm/study-NWKI-c1478b66-7fc6-4181-ad1e-cb95b0d84dca.json
deleted file mode 100644
index ec3e28d..0000000
--- a/test/data/enm/study-NWKI-c1478b66-7fc6-4181-ad1e-cb95b0d84dca.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-c1478b66-7fc6-4181-ad1e-cb95b0d84dca",
- "owner": {
- "substance": {
- "uuid": "NWKI-b110d018-6de0-303b-afcc-6a5e1f5911aa"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Mean Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 132
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c15e1b66-8c5c-4c14-bc32-cc68e87e3ca1.json b/test/data/enm/study-NWKI-c15e1b66-8c5c-4c14-bc32-cc68e87e3ca1.json
deleted file mode 100644
index 4bef69b..0000000
--- a/test/data/enm/study-NWKI-c15e1b66-8c5c-4c14-bc32-cc68e87e3ca1.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-c15e1b66-8c5c-4c14-bc32-cc68e87e3ca1",
- "owner": {
- "substance": {
- "uuid": "NWKI-b14e37d1-8dbb-36d7-925c-4093c91a0e92"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c186d7c2-0f51-4d53-969d-56fe3692dc68.json b/test/data/enm/study-NWKI-c186d7c2-0f51-4d53-969d-56fe3692dc68.json
deleted file mode 100644
index 3bb83fe..0000000
--- a/test/data/enm/study-NWKI-c186d7c2-0f51-4d53-969d-56fe3692dc68.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-c186d7c2-0f51-4d53-969d-56fe3692dc68",
- "owner": {
- "substance": {
- "uuid": "NWKI-9fb12a3a-3a26-3f95-82ed-371f58d92dfe"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 173,
- "errorValue": 17
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c1ae6c51-2308-42fd-90c7-a73c8acb6fdc.json b/test/data/enm/study-NWKI-c1ae6c51-2308-42fd-90c7-a73c8acb6fdc.json
deleted file mode 100644
index d373ca0..0000000
--- a/test/data/enm/study-NWKI-c1ae6c51-2308-42fd-90c7-a73c8acb6fdc.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-c1ae6c51-2308-42fd-90c7-a73c8acb6fdc",
- "owner": {
- "substance": {
- "uuid": "NWKI-b14e37d1-8dbb-36d7-925c-4093c91a0e92"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 200,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c1bb1427-0626-4b72-896e-ab772919fce2.json b/test/data/enm/study-NWKI-c1bb1427-0626-4b72-896e-ab772919fce2.json
deleted file mode 100644
index 73b153c..0000000
--- a/test/data/enm/study-NWKI-c1bb1427-0626-4b72-896e-ab772919fce2.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "uuid": "NWKI-c1bb1427-0626-4b72-896e-ab772919fce2",
- "owner": {
- "substance": {
- "uuid": "NWKI-bbb67d89-eaff-38ab-ba4f-403bfb064a0c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe2O3"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe2O3"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DED-2DSuccAminoSPARK680"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Ethylene_Diamine"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "NCCN"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Ethylene_Diamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c215b9a1-98b2-4937-8747-aec9b78f4ef4.json b/test/data/enm/study-NWKI-c215b9a1-98b2-4937-8747-aec9b78f4ef4.json
deleted file mode 100644
index af6e399..0000000
--- a/test/data/enm/study-NWKI-c215b9a1-98b2-4937-8747-aec9b78f4ef4.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-c215b9a1-98b2-4937-8747-aec9b78f4ef4",
- "owner": {
- "substance": {
- "uuid": "NWKI-2a046d54-ea47-31b2-a370-e886e5a0a6bb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "BiotinCoating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c2463846-6b9a-4c71-a4b3-dedea84d7645.json b/test/data/enm/study-NWKI-c2463846-6b9a-4c71-a4b3-dedea84d7645.json
deleted file mode 100644
index 4fa45d5..0000000
--- a/test/data/enm/study-NWKI-c2463846-6b9a-4c71-a4b3-dedea84d7645.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-c2463846-6b9a-4c71-a4b3-dedea84d7645",
- "owner": {
- "substance": {
- "uuid": "NWKI-812e122b-8bee-350d-8aea-aaaa88ce84dd"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 5,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c27eb7d0-84da-440c-a01a-4f42f78e80fe.json b/test/data/enm/study-NWKI-c27eb7d0-84da-440c-a01a-4f42f78e80fe.json
deleted file mode 100644
index cde3b61..0000000
--- a/test/data/enm/study-NWKI-c27eb7d0-84da-440c-a01a-4f42f78e80fe.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-c27eb7d0-84da-440c-a01a-4f42f78e80fe",
- "owner": {
- "substance": {
- "uuid": "NWKI-0a6e319e-71fc-37f7-b88d-fbda2e07ccc1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 2000,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 88
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c2f5256d-cedb-47c6-9caf-8dc827cf445f.json b/test/data/enm/study-NWKI-c2f5256d-cedb-47c6-9caf-8dc827cf445f.json
deleted file mode 100644
index 860019e..0000000
--- a/test/data/enm/study-NWKI-c2f5256d-cedb-47c6-9caf-8dc827cf445f.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-c2f5256d-cedb-47c6-9caf-8dc827cf445f",
- "owner": {
- "substance": {
- "uuid": "NWKI-395bf212-b710-3385-9c23-715a7055b015"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "BET",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 300
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c327ffa8-dbc1-4ce7-813d-d595b6d2eba8.json b/test/data/enm/study-NWKI-c327ffa8-dbc1-4ce7-813d-d595b6d2eba8.json
deleted file mode 100644
index 7151206..0000000
--- a/test/data/enm/study-NWKI-c327ffa8-dbc1-4ce7-813d-d595b6d2eba8.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-c327ffa8-dbc1-4ce7-813d-d595b6d2eba8",
- "owner": {
- "substance": {
- "uuid": "NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 6.25,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c333c3a5-ccab-4104-af6d-dc079e051b30.json b/test/data/enm/study-NWKI-c333c3a5-ccab-4104-af6d-dc079e051b30.json
deleted file mode 100644
index c8d10da..0000000
--- a/test/data/enm/study-NWKI-c333c3a5-ccab-4104-af6d-dc079e051b30.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-c333c3a5-ccab-4104-af6d-dc079e051b30",
- "owner": {
- "substance": {
- "uuid": "NWKI-ad44f58f-8080-3017-9f8d-485fad044849"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DRhodamine-2DProtamine"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Rhodamine"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Rhodamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c363d3ac-5a15-4fb4-a84c-c04fc482857a.json b/test/data/enm/study-NWKI-c363d3ac-5a15-4fb4-a84c-c04fc482857a.json
deleted file mode 100644
index 8206e28..0000000
--- a/test/data/enm/study-NWKI-c363d3ac-5a15-4fb4-a84c-c04fc482857a.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-c363d3ac-5a15-4fb4-a84c-c04fc482857a",
- "owner": {
- "substance": {
- "uuid": "NWKI-666817c2-87cb-3826-92f8-e79a7b37957d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Mean Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 67
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c42bcc42-46a4-4f5a-8ada-254aa78f8c67.json b/test/data/enm/study-NWKI-c42bcc42-46a4-4f5a-8ada-254aa78f8c67.json
deleted file mode 100644
index f40e88c..0000000
--- a/test/data/enm/study-NWKI-c42bcc42-46a4-4f5a-8ada-254aa78f8c67.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-c42bcc42-46a4-4f5a-8ada-254aa78f8c67",
- "owner": {
- "substance": {
- "uuid": "NWKI-97103918-5eeb-36a3-9981-3aa6dcef5d4c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 25,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c4a6e3f7-9b6d-4a08-9a7b-2371e6d964d7.json b/test/data/enm/study-NWKI-c4a6e3f7-9b6d-4a08-9a7b-2371e6d964d7.json
deleted file mode 100644
index 79606a0..0000000
--- a/test/data/enm/study-NWKI-c4a6e3f7-9b6d-4a08-9a7b-2371e6d964d7.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-c4a6e3f7-9b6d-4a08-9a7b-2371e6d964d7",
- "owner": {
- "substance": {
- "uuid": "NWKI-bbb67d89-eaff-38ab-ba4f-403bfb064a0c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -12.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c4ab521d-9cd7-4933-b4aa-e881f92846a8.json b/test/data/enm/study-NWKI-c4ab521d-9cd7-4933-b4aa-e881f92846a8.json
deleted file mode 100644
index 123ce65..0000000
--- a/test/data/enm/study-NWKI-c4ab521d-9cd7-4933-b4aa-e881f92846a8.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-c4ab521d-9cd7-4933-b4aa-e881f92846a8",
- "owner": {
- "substance": {
- "uuid": "NWKI-a32cb420-7aa2-3130-9612-edfe833d83fc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1080/10934520600966177",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loQualifier": ">=",
- "loValue": 15,
- "upQualifier": "<=",
- "upValue": 25
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c4b706f3-7240-4d55-9642-56dbc3083ce6.json b/test/data/enm/study-NWKI-c4b706f3-7240-4d55-9642-56dbc3083ce6.json
deleted file mode 100644
index 1fda38b..0000000
--- a/test/data/enm/study-NWKI-c4b706f3-7240-4d55-9642-56dbc3083ce6.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-c4b706f3-7240-4d55-9642-56dbc3083ce6",
- "owner": {
- "substance": {
- "uuid": "NWKI-cc55dabc-3794-3853-9cf1-1e0bcf31fb69"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "TEM",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 27.2,
- "errorValue": 3.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c4d59b68-76c2-4d23-85af-6b8a34e09c6e.json b/test/data/enm/study-NWKI-c4d59b68-76c2-4d23-85af-6b8a34e09c6e.json
deleted file mode 100644
index 5def0c7..0000000
--- a/test/data/enm/study-NWKI-c4d59b68-76c2-4d23-85af-6b8a34e09c6e.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-c4d59b68-76c2-4d23-85af-6b8a34e09c6e",
- "owner": {
- "substance": {
- "uuid": "NWKI-8ef21404-e101-37c8-8206-32f526d75012"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c4fd9f71-f95f-4a63-b75b-0e545eeb6199.json b/test/data/enm/study-NWKI-c4fd9f71-f95f-4a63-b75b-0e545eeb6199.json
deleted file mode 100644
index d0bcbd2..0000000
--- a/test/data/enm/study-NWKI-c4fd9f71-f95f-4a63-b75b-0e545eeb6199.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-c4fd9f71-f95f-4a63-b75b-0e545eeb6199",
- "owner": {
- "substance": {
- "uuid": "NWKI-4e021275-ae4e-3d24-bdb8-40c6d8d9d6fc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": 44
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c54c86ac-49f3-4655-9faf-4055521df1e8.json b/test/data/enm/study-NWKI-c54c86ac-49f3-4655-9faf-4055521df1e8.json
deleted file mode 100644
index 3c58025..0000000
--- a/test/data/enm/study-NWKI-c54c86ac-49f3-4655-9faf-4055521df1e8.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-c54c86ac-49f3-4655-9faf-4055521df1e8",
- "owner": {
- "substance": {
- "uuid": "NWKI-c3ff049e-e72a-35fe-9bbf-77f018259d63"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "BET",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loQualifier": ">=",
- "loValue": 0.0,
- "upQualifier": "<=",
- "upValue": 10
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c55f2582-d7a3-4263-aac5-8b336397ca1c.json b/test/data/enm/study-NWKI-c55f2582-d7a3-4263-aac5-8b336397ca1c.json
deleted file mode 100644
index 05a9dd3..0000000
--- a/test/data/enm/study-NWKI-c55f2582-d7a3-4263-aac5-8b336397ca1c.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-c55f2582-d7a3-4263-aac5-8b336397ca1c",
- "owner": {
- "substance": {
- "uuid": "NWKI-f6f54a71-9459-397b-b0f7-b27538cff042"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 306,
- "errorValue": 42
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c572805a-4c79-4717-8365-b8f801d9901a.json b/test/data/enm/study-NWKI-c572805a-4c79-4717-8365-b8f801d9901a.json
deleted file mode 100644
index 007dd12..0000000
--- a/test/data/enm/study-NWKI-c572805a-4c79-4717-8365-b8f801d9901a.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-c572805a-4c79-4717-8365-b8f801d9901a",
- "owner": {
- "substance": {
- "uuid": "NWKI-5172b34a-a6f6-398f-ace6-1d30e6bc9efa"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 74
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c5820914-4974-473c-84f0-7795422f6ae2.json b/test/data/enm/study-NWKI-c5820914-4974-473c-84f0-7795422f6ae2.json
deleted file mode 100644
index ba2bca9..0000000
--- a/test/data/enm/study-NWKI-c5820914-4974-473c-84f0-7795422f6ae2.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-c5820914-4974-473c-84f0-7795422f6ae2",
- "owner": {
- "substance": {
- "uuid": "NWKI-82c12809-d7af-3061-a531-1db744c521f0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DFITC"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c62b9663-f3c5-446d-9096-d7cd0c27a11f.json b/test/data/enm/study-NWKI-c62b9663-f3c5-446d-9096-d7cd0c27a11f.json
deleted file mode 100644
index 35931f6..0000000
--- a/test/data/enm/study-NWKI-c62b9663-f3c5-446d-9096-d7cd0c27a11f.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-c62b9663-f3c5-446d-9096-d7cd0c27a11f",
- "owner": {
- "substance": {
- "uuid": "NWKI-9f37da26-8619-3eb1-9c29-e5f9ea09de54"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": 64,
- "errorValue": 1.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c645880a-bdc5-42fe-acc0-6952484b5edb.json b/test/data/enm/study-NWKI-c645880a-bdc5-42fe-acc0-6952484b5edb.json
deleted file mode 100644
index 937ed87..0000000
--- a/test/data/enm/study-NWKI-c645880a-bdc5-42fe-acc0-6952484b5edb.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-c645880a-bdc5-42fe-acc0-6952484b5edb",
- "owner": {
- "substance": {
- "uuid": "NWKI-369d200e-2bfc-392d-ae00-ceb41fabd459"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn200546k",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 1.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c65ca657-472d-4e5b-a8ad-ca5d8b33d057.json b/test/data/enm/study-NWKI-c65ca657-472d-4e5b-a8ad-ca5d8b33d057.json
deleted file mode 100644
index 35eb6e1..0000000
--- a/test/data/enm/study-NWKI-c65ca657-472d-4e5b-a8ad-ca5d8b33d057.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "uuid": "NWKI-c65ca657-472d-4e5b-a8ad-ca5d8b33d057",
- "owner": {
- "substance": {
- "uuid": "NWKI-c8d9772c-e50e-3c71-986c-e45692150d71"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DCOOH"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "COOH"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "O=CO[H]"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "COOH"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c6ca1bd3-e533-4859-92a8-d494ba6b7a08.json b/test/data/enm/study-NWKI-c6ca1bd3-e533-4859-92a8-d494ba6b7a08.json
deleted file mode 100644
index 8ad1c9b..0000000
--- a/test/data/enm/study-NWKI-c6ca1bd3-e533-4859-92a8-d494ba6b7a08.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-c6ca1bd3-e533-4859-92a8-d494ba6b7a08",
- "owner": {
- "substance": {
- "uuid": "NWKI-ef8660fd-e624-3a94-91bc-ad5a6e47bcf3"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "ArabinoGalactanCoating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Arabino_Galactan"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Arabino_Galactan"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c6fe8e37-e6f1-44d8-8a80-99c26d6b73ca.json b/test/data/enm/study-NWKI-c6fe8e37-e6f1-44d8-8a80-99c26d6b73ca.json
deleted file mode 100644
index 0cc416b..0000000
--- a/test/data/enm/study-NWKI-c6fe8e37-e6f1-44d8-8a80-99c26d6b73ca.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-c6fe8e37-e6f1-44d8-8a80-99c26d6b73ca",
- "owner": {
- "substance": {
- "uuid": "NWKI-82bed004-9895-3bdf-822f-0b9906d2ee06"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe2O3"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe2O3"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DDArg7COOH"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "D-2DArginine-2D7-2DCOOH"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "D-2DArginine-2D7-2DCOOH"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c74426f1-d3f0-47f1-9dab-39c735b1d5db.json b/test/data/enm/study-NWKI-c74426f1-d3f0-47f1-9dab-39c735b1d5db.json
deleted file mode 100644
index a718c87..0000000
--- a/test/data/enm/study-NWKI-c74426f1-d3f0-47f1-9dab-39c735b1d5db.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-c74426f1-d3f0-47f1-9dab-39c735b1d5db",
- "owner": {
- "substance": {
- "uuid": "NWKI-3e42f6e5-635a-3f1e-a51a-39ce26751ec9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 15,
- "upQualifier": "<=",
- "upValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c7865053-f199-4816-9f79-de2f3d849b70.json b/test/data/enm/study-NWKI-c7865053-f199-4816-9f79-de2f3d849b70.json
deleted file mode 100644
index 0c3ef69..0000000
--- a/test/data/enm/study-NWKI-c7865053-f199-4816-9f79-de2f3d849b70.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-c7865053-f199-4816-9f79-de2f3d849b70",
- "owner": {
- "substance": {
- "uuid": "NWKI-d3c8fab1-762e-32b8-a46e-cf4158f8ec49"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/tx800289z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 70
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c7a4a433-7264-40b6-8aaf-20f0c90e5fa4.json b/test/data/enm/study-NWKI-c7a4a433-7264-40b6-8aaf-20f0c90e5fa4.json
deleted file mode 100644
index 361c9a0..0000000
--- a/test/data/enm/study-NWKI-c7a4a433-7264-40b6-8aaf-20f0c90e5fa4.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-c7a4a433-7264-40b6-8aaf-20f0c90e5fa4",
- "owner": {
- "substance": {
- "uuid": "NWKI-cc55dabc-3794-3853-9cf1-1e0bcf31fb69"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -58
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c7a9d6f8-0d62-4aa7-b9e4-611475a74e48.json b/test/data/enm/study-NWKI-c7a9d6f8-0d62-4aa7-b9e4-611475a74e48.json
deleted file mode 100644
index 70f71be..0000000
--- a/test/data/enm/study-NWKI-c7a9d6f8-0d62-4aa7-b9e4-611475a74e48.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-c7a9d6f8-0d62-4aa7-b9e4-611475a74e48",
- "owner": {
- "substance": {
- "uuid": "NWKI-438d1468-d5d7-3977-9dab-15a3a05add38"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c7ab52cf-dcbf-4b3a-b246-25604905b5c6.json b/test/data/enm/study-NWKI-c7ab52cf-dcbf-4b3a-b246-25604905b5c6.json
deleted file mode 100644
index 0ef104e..0000000
--- a/test/data/enm/study-NWKI-c7ab52cf-dcbf-4b3a-b246-25604905b5c6.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-c7ab52cf-dcbf-4b3a-b246-25604905b5c6",
- "owner": {
- "substance": {
- "uuid": "NWKI-afc33b0f-f6ce-3c1b-8a3d-cede13515323"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DAminoSPARK680"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PVA"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c7f84ccb-8474-4b7c-8674-aa196eac6741.json b/test/data/enm/study-NWKI-c7f84ccb-8474-4b7c-8674-aa196eac6741.json
deleted file mode 100644
index 5dabca5..0000000
--- a/test/data/enm/study-NWKI-c7f84ccb-8474-4b7c-8674-aa196eac6741.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-c7f84ccb-8474-4b7c-8674-aa196eac6741",
- "owner": {
- "substance": {
- "uuid": "NWKI-3b09fdd1-3024-3be3-b1c6-332b44f75f99"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 15,
- "upQualifier": "<=",
- "upValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c8075a01-07fe-4205-b282-e58f993175ab.json b/test/data/enm/study-NWKI-c8075a01-07fe-4205-b282-e58f993175ab.json
deleted file mode 100644
index 758f674..0000000
--- a/test/data/enm/study-NWKI-c8075a01-07fe-4205-b282-e58f993175ab.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-c8075a01-07fe-4205-b282-e58f993175ab",
- "owner": {
- "substance": {
- "uuid": "NWKI-de03994b-9d74-3e39-aa41-e7df34384442"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 200,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c8207d31-f8f9-48db-ba39-15668b625d56.json b/test/data/enm/study-NWKI-c8207d31-f8f9-48db-ba39-15668b625d56.json
deleted file mode 100644
index cbc8c02..0000000
--- a/test/data/enm/study-NWKI-c8207d31-f8f9-48db-ba39-15668b625d56.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-c8207d31-f8f9-48db-ba39-15668b625d56",
- "owner": {
- "substance": {
- "uuid": "NWKI-5f88a526-3e3f-3da5-8082-8d1da0cdfefa"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 42
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c84603a4-4444-4b84-b8e8-c7f3ca1c0bf0.json b/test/data/enm/study-NWKI-c84603a4-4444-4b84-b8e8-c7f3ca1c0bf0.json
deleted file mode 100644
index 58d38c8..0000000
--- a/test/data/enm/study-NWKI-c84603a4-4444-4b84-b8e8-c7f3ca1c0bf0.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-c84603a4-4444-4b84-b8e8-c7f3ca1c0bf0",
- "owner": {
- "substance": {
- "uuid": "NWKI-ed06c39e-c7f2-3173-bd74-35b8257544b5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 20,
- "upQualifier": "<=",
- "upValue": 24
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c864edd3-9ac3-4f4a-bbd6-ba8038476061.json b/test/data/enm/study-NWKI-c864edd3-9ac3-4f4a-bbd6-ba8038476061.json
deleted file mode 100644
index ed4cb96..0000000
--- a/test/data/enm/study-NWKI-c864edd3-9ac3-4f4a-bbd6-ba8038476061.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-c864edd3-9ac3-4f4a-bbd6-ba8038476061",
- "owner": {
- "substance": {
- "uuid": "NWKI-a2d5a729-4ed1-3f1b-a5fd-3bd090a48aa5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn301622h",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 206,
- "errorValue": 16
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c8c7a34c-83af-4fe7-a02c-0a417ab17eea.json b/test/data/enm/study-NWKI-c8c7a34c-83af-4fe7-a02c-0a417ab17eea.json
deleted file mode 100644
index ce08579..0000000
--- a/test/data/enm/study-NWKI-c8c7a34c-83af-4fe7-a02c-0a417ab17eea.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-c8c7a34c-83af-4fe7-a02c-0a417ab17eea",
- "owner": {
- "substance": {
- "uuid": "NWKI-0494174f-9fc2-3296-8ffb-4fadaceb0348"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn202116p",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -11.9,
- "errorValue": 1.61
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c8d35a03-2511-4004-a35b-70ca09de5d0c.json b/test/data/enm/study-NWKI-c8d35a03-2511-4004-a35b-70ca09de5d0c.json
deleted file mode 100644
index 4bb4fe9..0000000
--- a/test/data/enm/study-NWKI-c8d35a03-2511-4004-a35b-70ca09de5d0c.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-c8d35a03-2511-4004-a35b-70ca09de5d0c",
- "owner": {
- "substance": {
- "uuid": "NWKI-9f37da26-8619-3eb1-9c29-e5f9ea09de54"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 7000,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 74.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c8f1ee43-48b3-4305-b131-8bd700da8beb.json b/test/data/enm/study-NWKI-c8f1ee43-48b3-4305-b131-8bd700da8beb.json
deleted file mode 100644
index f519880..0000000
--- a/test/data/enm/study-NWKI-c8f1ee43-48b3-4305-b131-8bd700da8beb.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-c8f1ee43-48b3-4305-b131-8bd700da8beb",
- "owner": {
- "substance": {
- "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 6,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 4
- }
- },
- "result": {
- "unit": null,
- "loValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c8fbf5fb-579e-4848-9157-f0ab7864a30d.json b/test/data/enm/study-NWKI-c8fbf5fb-579e-4848-9157-f0ab7864a30d.json
deleted file mode 100644
index f5c86e4..0000000
--- a/test/data/enm/study-NWKI-c8fbf5fb-579e-4848-9157-f0ab7864a30d.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-c8fbf5fb-579e-4848-9157-f0ab7864a30d",
- "owner": {
- "substance": {
- "uuid": "NWKI-45fc0568-39f3-33f2-bd68-f953733c0c96"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 62.4,
- "errorValue": 13.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c9a98eea-c9b4-485b-891f-e715ffbe4792.json b/test/data/enm/study-NWKI-c9a98eea-c9b4-485b-891f-e715ffbe4792.json
deleted file mode 100644
index 92214e6..0000000
--- a/test/data/enm/study-NWKI-c9a98eea-c9b4-485b-891f-e715ffbe4792.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-c9a98eea-c9b4-485b-891f-e715ffbe4792",
- "owner": {
- "substance": {
- "uuid": "NWKI-ae0be5b8-266b-3b6a-825d-55f14b51cc99"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -6.47
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-c9b7dc82-8a66-49fb-8374-769b7beb12d5.json b/test/data/enm/study-NWKI-c9b7dc82-8a66-49fb-8374-769b7beb12d5.json
deleted file mode 100644
index d5a0fa9..0000000
--- a/test/data/enm/study-NWKI-c9b7dc82-8a66-49fb-8374-769b7beb12d5.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-c9b7dc82-8a66-49fb-8374-769b7beb12d5",
- "owner": {
- "substance": {
- "uuid": "NWKI-82bed004-9895-3bdf-822f-0b9906d2ee06"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DDArg7COOH"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PVA"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ca3d7a1a-7879-4241-b1da-bdf2fba9e10f.json b/test/data/enm/study-NWKI-ca3d7a1a-7879-4241-b1da-bdf2fba9e10f.json
deleted file mode 100644
index b6a9d19..0000000
--- a/test/data/enm/study-NWKI-ca3d7a1a-7879-4241-b1da-bdf2fba9e10f.json
+++ /dev/null
@@ -1,65 +0,0 @@
-{
- "uuid": "NWKI-ca3d7a1a-7879-4241-b1da-bdf2fba9e10f",
- "owner": {
- "substance": {
- "uuid": "NWKI-4358aa69-dec1-387a-b7ea-2238198ccdff"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "Serum": {
- "loValue": "sfMEM"
- },
- "pH": {
- "loValue": 8.12
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -36
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ca5604bc-2495-46fd-9dd5-9a6ad63058f6.json b/test/data/enm/study-NWKI-ca5604bc-2495-46fd-9dd5-9a6ad63058f6.json
deleted file mode 100644
index 026558e..0000000
--- a/test/data/enm/study-NWKI-ca5604bc-2495-46fd-9dd5-9a6ad63058f6.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-ca5604bc-2495-46fd-9dd5-9a6ad63058f6",
- "owner": {
- "substance": {
- "uuid": "NWKI-e5b618fd-dd48-3562-9a55-737ac7a68466"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DPEG-2DED-2DVT750"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PVA"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ca95fac8-a830-415a-8228-5640a8690cba.json b/test/data/enm/study-NWKI-ca95fac8-a830-415a-8228-5640a8690cba.json
deleted file mode 100644
index 7e46463..0000000
--- a/test/data/enm/study-NWKI-ca95fac8-a830-415a-8228-5640a8690cba.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-ca95fac8-a830-415a-8228-5640a8690cba",
- "owner": {
- "substance": {
- "uuid": "NWKI-984a9c7f-2372-3b8f-9ff5-93a9f94f2eb7"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn202116p",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -13.2,
- "errorValue": 1.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-cac867ed-e155-4f41-b9d5-1f5d0b4fe602.json b/test/data/enm/study-NWKI-cac867ed-e155-4f41-b9d5-1f5d0b4fe602.json
deleted file mode 100644
index e0b0f16..0000000
--- a/test/data/enm/study-NWKI-cac867ed-e155-4f41-b9d5-1f5d0b4fe602.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-cac867ed-e155-4f41-b9d5-1f5d0b4fe602",
- "owner": {
- "substance": {
- "uuid": "NWKI-e4dab3d9-2699-3a0b-9e9c-f257088142cc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 200,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-cae065a9-5659-4188-a9f1-c0992c8f9148.json b/test/data/enm/study-NWKI-cae065a9-5659-4188-a9f1-c0992c8f9148.json
deleted file mode 100644
index 6e20d3f..0000000
--- a/test/data/enm/study-NWKI-cae065a9-5659-4188-a9f1-c0992c8f9148.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-cae065a9-5659-4188-a9f1-c0992c8f9148",
- "owner": {
- "substance": {
- "uuid": "NWKI-e6ef5597-a3f9-3f21-afff-db5f654ef534"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 15,
- "upQualifier": "<=",
- "upValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-cb2fb3aa-2d41-467d-897a-48c64f399e43.json b/test/data/enm/study-NWKI-cb2fb3aa-2d41-467d-897a-48c64f399e43.json
deleted file mode 100644
index 3767277..0000000
--- a/test/data/enm/study-NWKI-cb2fb3aa-2d41-467d-897a-48c64f399e43.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-cb2fb3aa-2d41-467d-897a-48c64f399e43",
- "owner": {
- "substance": {
- "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Colon HT29",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 600,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 8
- }
- },
- "result": {
- "unit": null,
- "loValue": 5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-cb6f500d-8d1c-4196-94b8-1a8b9bcd30f6.json b/test/data/enm/study-NWKI-cb6f500d-8d1c-4196-94b8-1a8b9bcd30f6.json
deleted file mode 100644
index 14e4434..0000000
--- a/test/data/enm/study-NWKI-cb6f500d-8d1c-4196-94b8-1a8b9bcd30f6.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-cb6f500d-8d1c-4196-94b8-1a8b9bcd30f6",
- "owner": {
- "substance": {
- "uuid": "NWKI-41e63d70-d7c0-3bd2-9a65-e99dcdedb1a5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -51.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-cc5b881d-450b-46a0-acf0-0b59464a24f8.json b/test/data/enm/study-NWKI-cc5b881d-450b-46a0-acf0-0b59464a24f8.json
deleted file mode 100644
index a4ac8f3..0000000
--- a/test/data/enm/study-NWKI-cc5b881d-450b-46a0-acf0-0b59464a24f8.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-cc5b881d-450b-46a0-acf0-0b59464a24f8",
- "owner": {
- "substance": {
- "uuid": "NWKI-7998492c-3902-3cc2-9f92-cdfae53cfc02"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es051043o",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002993_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002993",
- "title": "BAO_0002993 Cytotoxicity Assay"
- },
- "endpoint": "Concentration in cell",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Concentration_in_cell",
- "conditions": {
- "Concentration in culture medium": {
- "loValue": 100,
- "unit": "ng/g"
- },
- "Time": {
- "loValue": 3,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-cd054b32-9679-4de6-9770-3e0b6935bd20.json b/test/data/enm/study-NWKI-cd054b32-9679-4de6-9770-3e0b6935bd20.json
deleted file mode 100644
index 2bd0670..0000000
--- a/test/data/enm/study-NWKI-cd054b32-9679-4de6-9770-3e0b6935bd20.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-cd054b32-9679-4de6-9770-3e0b6935bd20",
- "owner": {
- "substance": {
- "uuid": "NWKI-b14e37d1-8dbb-36d7-925c-4093c91a0e92"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 10,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-cd0f4a3a-377f-456a-b142-1f5d7726f318.json b/test/data/enm/study-NWKI-cd0f4a3a-377f-456a-b142-1f5d7726f318.json
deleted file mode 100644
index f5afc15..0000000
--- a/test/data/enm/study-NWKI-cd0f4a3a-377f-456a-b142-1f5d7726f318.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-cd0f4a3a-377f-456a-b142-1f5d7726f318",
- "owner": {
- "substance": {
- "uuid": "NWKI-666817c2-87cb-3826-92f8-e79a7b37957d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-cd4bbc5e-2a02-47f5-be5c-c2cb8d013a8b.json b/test/data/enm/study-NWKI-cd4bbc5e-2a02-47f5-be5c-c2cb8d013a8b.json
deleted file mode 100644
index 4d11907..0000000
--- a/test/data/enm/study-NWKI-cd4bbc5e-2a02-47f5-be5c-c2cb8d013a8b.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-cd4bbc5e-2a02-47f5-be5c-c2cb8d013a8b",
- "owner": {
- "substance": {
- "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Colon HT29",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 60,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 24
- }
- },
- "result": {
- "unit": null,
- "loValue": 15
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-cddd50dd-d01f-41e3-8223-bf8bb3f790d9.json b/test/data/enm/study-NWKI-cddd50dd-d01f-41e3-8223-bf8bb3f790d9.json
deleted file mode 100644
index 963ad90..0000000
--- a/test/data/enm/study-NWKI-cddd50dd-d01f-41e3-8223-bf8bb3f790d9.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-cddd50dd-d01f-41e3-8223-bf8bb3f790d9",
- "owner": {
- "substance": {
- "uuid": "NWKI-18aebb90-aacb-3e15-b516-4d3683e9c27b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 40,
- "upQualifier": "<=",
- "upValue": 300
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ce2bfbe2-1161-4c0e-ba26-281cd1f4c497.json b/test/data/enm/study-NWKI-ce2bfbe2-1161-4c0e-ba26-281cd1f4c497.json
deleted file mode 100644
index c8903d6..0000000
--- a/test/data/enm/study-NWKI-ce2bfbe2-1161-4c0e-ba26-281cd1f4c497.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-ce2bfbe2-1161-4c0e-ba26-281cd1f4c497",
- "owner": {
- "substance": {
- "uuid": "NWKI-cfea3b7c-ee39-34ef-8349-16b1e7825861"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": 0.25
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ce2e0558-33d9-4205-bf48-b1f053a73a96.json b/test/data/enm/study-NWKI-ce2e0558-33d9-4205-bf48-b1f053a73a96.json
deleted file mode 100644
index e757691..0000000
--- a/test/data/enm/study-NWKI-ce2e0558-33d9-4205-bf48-b1f053a73a96.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-ce2e0558-33d9-4205-bf48-b1f053a73a96",
- "owner": {
- "substance": {
- "uuid": "NWKI-e373781b-461e-35dd-ae27-4169b7d743af"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DFITC"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "FITC"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "FITC"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ce622deb-7190-4284-a5e1-eee219c4d6b0.json b/test/data/enm/study-NWKI-ce622deb-7190-4284-a5e1-eee219c4d6b0.json
deleted file mode 100644
index e5f1ff1..0000000
--- a/test/data/enm/study-NWKI-ce622deb-7190-4284-a5e1-eee219c4d6b0.json
+++ /dev/null
@@ -1,65 +0,0 @@
-{
- "uuid": "NWKI-ce622deb-7190-4284-a5e1-eee219c4d6b0",
- "owner": {
- "substance": {
- "uuid": "NWKI-895a506b-c331-3576-bf9e-cbcde5822c11"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "Serum": {
- "loValue": "PBS"
- },
- "pH": {
- "loValue": 7.45
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -36
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ce6412b4-8280-4c33-8930-d44cf9813219.json b/test/data/enm/study-NWKI-ce6412b4-8280-4c33-8930-d44cf9813219.json
deleted file mode 100644
index 1f14ad9..0000000
--- a/test/data/enm/study-NWKI-ce6412b4-8280-4c33-8930-d44cf9813219.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-ce6412b4-8280-4c33-8930-d44cf9813219",
- "owner": {
- "substance": {
- "uuid": "NWKI-e93a9eb3-83df-3522-b417-7b3a379054a6"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 280
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ce73ec54-2cbf-4476-add4-d2ad07ccc89f.json b/test/data/enm/study-NWKI-ce73ec54-2cbf-4476-add4-d2ad07ccc89f.json
deleted file mode 100644
index 3ce404a..0000000
--- a/test/data/enm/study-NWKI-ce73ec54-2cbf-4476-add4-d2ad07ccc89f.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-ce73ec54-2cbf-4476-add4-d2ad07ccc89f",
- "owner": {
- "substance": {
- "uuid": "NWKI-812e122b-8bee-350d-8aea-aaaa88ce84dd"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 100,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ce97c205-4d65-4d45-8c55-00427a250663.json b/test/data/enm/study-NWKI-ce97c205-4d65-4d45-8c55-00427a250663.json
deleted file mode 100644
index 310dbef..0000000
--- a/test/data/enm/study-NWKI-ce97c205-4d65-4d45-8c55-00427a250663.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-ce97c205-4d65-4d45-8c55-00427a250663",
- "owner": {
- "substance": {
- "uuid": "NWKI-2581f636-c16f-3680-9b3a-2bf0c8cab0b1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -54.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-cf25b134-5092-45c7-b48f-807252da6799.json b/test/data/enm/study-NWKI-cf25b134-5092-45c7-b48f-807252da6799.json
deleted file mode 100644
index 38a0aa2..0000000
--- a/test/data/enm/study-NWKI-cf25b134-5092-45c7-b48f-807252da6799.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-cf25b134-5092-45c7-b48f-807252da6799",
- "owner": {
- "substance": {
- "uuid": "NWKI-33eda014-7b69-358a-93f0-e0ceef166a52"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -39.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-cf2e640c-3ae5-4149-bd89-81fe25149e93.json b/test/data/enm/study-NWKI-cf2e640c-3ae5-4149-bd89-81fe25149e93.json
deleted file mode 100644
index 3d47bf2..0000000
--- a/test/data/enm/study-NWKI-cf2e640c-3ae5-4149-bd89-81fe25149e93.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-cf2e640c-3ae5-4149-bd89-81fe25149e93",
- "owner": {
- "substance": {
- "uuid": "NWKI-6b1b44fa-70c1-3034-9c4b-7efb334762e0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Mean Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 95
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-cf538ea0-cd50-4731-88f6-fccfee1145ad.json b/test/data/enm/study-NWKI-cf538ea0-cd50-4731-88f6-fccfee1145ad.json
deleted file mode 100644
index e1646bf..0000000
--- a/test/data/enm/study-NWKI-cf538ea0-cd50-4731-88f6-fccfee1145ad.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-cf538ea0-cd50-4731-88f6-fccfee1145ad",
- "owner": {
- "substance": {
- "uuid": "NWKI-9f37da26-8619-3eb1-9c29-e5f9ea09de54"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 221,
- "errorValue": 0.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-cf70e3af-ea76-4f8d-87cf-e51296a88be4.json b/test/data/enm/study-NWKI-cf70e3af-ea76-4f8d-87cf-e51296a88be4.json
deleted file mode 100644
index 552da18..0000000
--- a/test/data/enm/study-NWKI-cf70e3af-ea76-4f8d-87cf-e51296a88be4.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-cf70e3af-ea76-4f8d-87cf-e51296a88be4",
- "owner": {
- "substance": {
- "uuid": "NWKI-3d8aaa66-97d9-351b-9771-691300d5e97c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 10
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-cfd7a3eb-b360-4bac-9b3e-16b4698b9103.json b/test/data/enm/study-NWKI-cfd7a3eb-b360-4bac-9b3e-16b4698b9103.json
deleted file mode 100644
index c7acd32..0000000
--- a/test/data/enm/study-NWKI-cfd7a3eb-b360-4bac-9b3e-16b4698b9103.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "uuid": "NWKI-cfd7a3eb-b360-4bac-9b3e-16b4698b9103",
- "owner": {
- "substance": {
- "uuid": "NWKI-cc55dabc-3794-3853-9cf1-1e0bcf31fb69"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "SiO2"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "SiO2"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "COOH_Coating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "COOH"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "O=CO[H]"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "COOH"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d01537d1-37be-4bd6-904e-f63663b50e3f.json b/test/data/enm/study-NWKI-d01537d1-37be-4bd6-904e-f63663b50e3f.json
deleted file mode 100644
index 6fea173..0000000
--- a/test/data/enm/study-NWKI-d01537d1-37be-4bd6-904e-f63663b50e3f.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-d01537d1-37be-4bd6-904e-f63663b50e3f",
- "owner": {
- "substance": {
- "uuid": "NWKI-1af17b5b-947a-3fd2-a000-cadf542dea4d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 116,
- "errorValue": 26
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d03c4839-a764-49e5-9117-f1f25c396c3e.json b/test/data/enm/study-NWKI-d03c4839-a764-49e5-9117-f1f25c396c3e.json
deleted file mode 100644
index 7fa1532..0000000
--- a/test/data/enm/study-NWKI-d03c4839-a764-49e5-9117-f1f25c396c3e.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-d03c4839-a764-49e5-9117-f1f25c396c3e",
- "owner": {
- "substance": {
- "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 60,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 4
- }
- },
- "result": {
- "unit": null,
- "loValue": 45
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d09421ea-de27-446c-8dd4-c475e3a51de7.json b/test/data/enm/study-NWKI-d09421ea-de27-446c-8dd4-c475e3a51de7.json
deleted file mode 100644
index 6287aac..0000000
--- a/test/data/enm/study-NWKI-d09421ea-de27-446c-8dd4-c475e3a51de7.json
+++ /dev/null
@@ -1,93 +0,0 @@
-{
- "uuid": "NWKI-d09421ea-de27-446c-8dd4-c475e3a51de7",
- "owner": {
- "substance": {
- "uuid": "NWKI-e5b618fd-dd48-3562-9a55-737ac7a68466"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe2O3"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe2O3"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DPEG-2DED-2DVT750"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Ethylene_Diamine"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "NCCN"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Ethylene_Diamine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d09c69c6-09df-4b84-952f-ba478fa185fd.json b/test/data/enm/study-NWKI-d09c69c6-09df-4b84-952f-ba478fa185fd.json
deleted file mode 100644
index 32be288..0000000
--- a/test/data/enm/study-NWKI-d09c69c6-09df-4b84-952f-ba478fa185fd.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-d09c69c6-09df-4b84-952f-ba478fa185fd",
- "owner": {
- "substance": {
- "uuid": "NWKI-e0ffe4e6-978c-367d-a011-bd700587c9fe"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/tx800289z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 20,
- "upQualifier": "<=",
- "upValue": 40
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d17c12f1-7406-4114-82b4-2e1bc70fb96f.json b/test/data/enm/study-NWKI-d17c12f1-7406-4114-82b4-2e1bc70fb96f.json
deleted file mode 100644
index bc78f91..0000000
--- a/test/data/enm/study-NWKI-d17c12f1-7406-4114-82b4-2e1bc70fb96f.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-d17c12f1-7406-4114-82b4-2e1bc70fb96f",
- "owner": {
- "substance": {
- "uuid": "NWKI-666817c2-87cb-3826-92f8-e79a7b37957d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 60
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d19e51b2-561d-460c-8614-c85e7e887e92.json b/test/data/enm/study-NWKI-d19e51b2-561d-460c-8614-c85e7e887e92.json
deleted file mode 100644
index a9be5af..0000000
--- a/test/data/enm/study-NWKI-d19e51b2-561d-460c-8614-c85e7e887e92.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-d19e51b2-561d-460c-8614-c85e7e887e92",
- "owner": {
- "substance": {
- "uuid": "NWKI-8a4b3e23-3327-3421-b20a-2e71939b44b1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DFITC-2DGlutamicAcid"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d1eaef56-d795-4c70-8af6-5c4da695891e.json b/test/data/enm/study-NWKI-d1eaef56-d795-4c70-8af6-5c4da695891e.json
deleted file mode 100644
index 69831cf..0000000
--- a/test/data/enm/study-NWKI-d1eaef56-d795-4c70-8af6-5c4da695891e.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-d1eaef56-d795-4c70-8af6-5c4da695891e",
- "owner": {
- "substance": {
- "uuid": "NWKI-f1cc0abb-2905-3699-be62-b238a21e6bad"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 0.0,
- "upQualifier": "<=",
- "upValue": 50
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d21a01d9-18f0-4c76-ac87-ce5792d8a1f6.json b/test/data/enm/study-NWKI-d21a01d9-18f0-4c76-ac87-ce5792d8a1f6.json
deleted file mode 100644
index f1503f2..0000000
--- a/test/data/enm/study-NWKI-d21a01d9-18f0-4c76-ac87-ce5792d8a1f6.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-d21a01d9-18f0-4c76-ac87-ce5792d8a1f6",
- "owner": {
- "substance": {
- "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 600,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 4
- }
- },
- "result": {
- "unit": null,
- "loValue": 30
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d24f4f01-e311-4e37-a276-ee42155aa89f.json b/test/data/enm/study-NWKI-d24f4f01-e311-4e37-a276-ee42155aa89f.json
deleted file mode 100644
index 11a9ae0..0000000
--- a/test/data/enm/study-NWKI-d24f4f01-e311-4e37-a276-ee42155aa89f.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-d24f4f01-e311-4e37-a276-ee42155aa89f",
- "owner": {
- "substance": {
- "uuid": "NWKI-e4dab3d9-2699-3a0b-9e9c-f257088142cc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 100,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d32092e6-7b57-448b-b8d1-2c6b2eaf9e28.json b/test/data/enm/study-NWKI-d32092e6-7b57-448b-b8d1-2c6b2eaf9e28.json
deleted file mode 100644
index 1889acd..0000000
--- a/test/data/enm/study-NWKI-d32092e6-7b57-448b-b8d1-2c6b2eaf9e28.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-d32092e6-7b57-448b-b8d1-2c6b2eaf9e28",
- "owner": {
- "substance": {
- "uuid": "NWKI-4832de65-5a92-3849-8061-729a2d83017e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Mean Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 38
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d363ac4e-29fd-4673-9b2a-5dfc42af0fbc.json b/test/data/enm/study-NWKI-d363ac4e-29fd-4673-9b2a-5dfc42af0fbc.json
deleted file mode 100644
index e46b0b5..0000000
--- a/test/data/enm/study-NWKI-d363ac4e-29fd-4673-9b2a-5dfc42af0fbc.json
+++ /dev/null
@@ -1,54 +0,0 @@
-{
- "uuid": "NWKI-d363ac4e-29fd-4673-9b2a-5dfc42af0fbc",
- "owner": {
- "substance": {
- "uuid": "NWKI-2af8ed34-029d-3644-8327-23a596cfae0d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_BOILING_SECTION",
- "term": "http://semanticscience.org/resource/CHEMINF_000257",
- "title": "4.3 Boiling point"
- },
- "endpoint": "Boiling Point",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Boiling point",
- "conditions": {
- "Atm. Pressure": null,
- "Decomposition": null
- },
- "result": {
- "unit": "°C",
- "loValue": 2230
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d37b40f8-aadf-497e-b6f0-13a752fc4839.json b/test/data/enm/study-NWKI-d37b40f8-aadf-497e-b6f0-13a752fc4839.json
deleted file mode 100644
index 8240bd9..0000000
--- a/test/data/enm/study-NWKI-d37b40f8-aadf-497e-b6f0-13a752fc4839.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-d37b40f8-aadf-497e-b6f0-13a752fc4839",
- "owner": {
- "substance": {
- "uuid": "NWKI-82bed004-9895-3bdf-822f-0b9906d2ee06"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d3946e40-9b64-499d-9782-b80aaeba64d0.json b/test/data/enm/study-NWKI-d3946e40-9b64-499d-9782-b80aaeba64d0.json
deleted file mode 100644
index 87a4147..0000000
--- a/test/data/enm/study-NWKI-d3946e40-9b64-499d-9782-b80aaeba64d0.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-d3946e40-9b64-499d-9782-b80aaeba64d0",
- "owner": {
- "substance": {
- "uuid": "NWKI-c0927a67-d21d-37e8-932d-fb1607e58aee"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002167_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002167",
- "title": "BAO_0002167 Genotoxicity Assay"
- },
- "endpoint": "DNA in Tail",
- "guideline": [
- "Fpg-2Dmodified Comet Assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Fpg-2Dmodified Comet Assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "DNA_in_Tail",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- },
- "FPG Content": {
- "loValue": 0
- }
- },
- "result": {
- "unit": "%",
- "loValue": 6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d4333b24-64e1-448c-8b0a-880633a58698.json b/test/data/enm/study-NWKI-d4333b24-64e1-448c-8b0a-880633a58698.json
deleted file mode 100644
index 04a6113..0000000
--- a/test/data/enm/study-NWKI-d4333b24-64e1-448c-8b0a-880633a58698.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-d4333b24-64e1-448c-8b0a-880633a58698",
- "owner": {
- "substance": {
- "uuid": "NWKI-f9f316e8-e8a9-37f9-877f-86519b3af20e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DFITC-2DProtamine"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d47eb16a-4a2e-4b2e-9dde-a413623cd2e1.json b/test/data/enm/study-NWKI-d47eb16a-4a2e-4b2e-9dde-a413623cd2e1.json
deleted file mode 100644
index d7b9c86..0000000
--- a/test/data/enm/study-NWKI-d47eb16a-4a2e-4b2e-9dde-a413623cd2e1.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-d47eb16a-4a2e-4b2e-9dde-a413623cd2e1",
- "owner": {
- "substance": {
- "uuid": "NWKI-c0927a67-d21d-37e8-932d-fb1607e58aee"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "LDH Release",
- "guideline": [
- "Lactate Dehydrogenase Activity"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Lactate Dehydrogenase Activity"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "LDH_Release",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 15
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d4e7916c-9c3c-439c-96e6-e7fde7d866a2.json b/test/data/enm/study-NWKI-d4e7916c-9c3c-439c-96e6-e7fde7d866a2.json
deleted file mode 100644
index a8aef54..0000000
--- a/test/data/enm/study-NWKI-d4e7916c-9c3c-439c-96e6-e7fde7d866a2.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-d4e7916c-9c3c-439c-96e6-e7fde7d866a2",
- "owner": {
- "substance": {
- "uuid": "NWKI-61515bd0-5a80-3428-a093-01be1d677862"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23.1,
- "errorValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d4f7c4f3-c00a-4572-a2fa-5f174ec7d412.json b/test/data/enm/study-NWKI-d4f7c4f3-c00a-4572-a2fa-5f174ec7d412.json
deleted file mode 100644
index 2558ba9..0000000
--- a/test/data/enm/study-NWKI-d4f7c4f3-c00a-4572-a2fa-5f174ec7d412.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-d4f7c4f3-c00a-4572-a2fa-5f174ec7d412",
- "owner": {
- "substance": {
- "uuid": "NWKI-c05becdf-4b9b-3599-9922-89235b2e10da"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -37
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d51a019b-52b5-4263-98aa-a3f9535c9db8.json b/test/data/enm/study-NWKI-d51a019b-52b5-4263-98aa-a3f9535c9db8.json
deleted file mode 100644
index c0c5207..0000000
--- a/test/data/enm/study-NWKI-d51a019b-52b5-4263-98aa-a3f9535c9db8.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-d51a019b-52b5-4263-98aa-a3f9535c9db8",
- "owner": {
- "substance": {
- "uuid": "NWKI-0a6e319e-71fc-37f7-b88d-fbda2e07ccc1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 1000,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 92
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d55980e2-2f36-417f-8243-9eb758f57dd3.json b/test/data/enm/study-NWKI-d55980e2-2f36-417f-8243-9eb758f57dd3.json
deleted file mode 100644
index 6cced24..0000000
--- a/test/data/enm/study-NWKI-d55980e2-2f36-417f-8243-9eb758f57dd3.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-d55980e2-2f36-417f-8243-9eb758f57dd3",
- "owner": {
- "substance": {
- "uuid": "NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 50,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d59c481d-eb03-4319-8994-a0e250e3edfe.json b/test/data/enm/study-NWKI-d59c481d-eb03-4319-8994-a0e250e3edfe.json
deleted file mode 100644
index 2dfd8c3..0000000
--- a/test/data/enm/study-NWKI-d59c481d-eb03-4319-8994-a0e250e3edfe.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-d59c481d-eb03-4319-8994-a0e250e3edfe",
- "owner": {
- "substance": {
- "uuid": "NWKI-9f46a2dd-dda3-3c99-81c0-8d904172c345"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -73.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d5b02413-e80f-4df6-baa6-1da0cc43ef92.json b/test/data/enm/study-NWKI-d5b02413-e80f-4df6-baa6-1da0cc43ef92.json
deleted file mode 100644
index 299fc2f..0000000
--- a/test/data/enm/study-NWKI-d5b02413-e80f-4df6-baa6-1da0cc43ef92.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-d5b02413-e80f-4df6-baa6-1da0cc43ef92",
- "owner": {
- "substance": {
- "uuid": "NWKI-97a6970a-0e83-3890-ae6e-5e83b99c0325"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 21
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d5b501c9-3b68-4aaa-ab10-597a10525c6b.json b/test/data/enm/study-NWKI-d5b501c9-3b68-4aaa-ab10-597a10525c6b.json
deleted file mode 100644
index 3cd19ae..0000000
--- a/test/data/enm/study-NWKI-d5b501c9-3b68-4aaa-ab10-597a10525c6b.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-d5b501c9-3b68-4aaa-ab10-597a10525c6b",
- "owner": {
- "substance": {
- "uuid": "NWKI-2a046d54-ea47-31b2-a370-e886e5a0a6bb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "BiotinCoating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "FITC"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "FITC"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d5e6f259-f334-47d7-882b-339469b2d6c7.json b/test/data/enm/study-NWKI-d5e6f259-f334-47d7-882b-339469b2d6c7.json
deleted file mode 100644
index 6d2e6ca..0000000
--- a/test/data/enm/study-NWKI-d5e6f259-f334-47d7-882b-339469b2d6c7.json
+++ /dev/null
@@ -1,55 +0,0 @@
-{
- "uuid": "NWKI-d5e6f259-f334-47d7-882b-339469b2d6c7",
- "owner": {
- "substance": {
- "uuid": "NWKI-67b71fb2-85c1-3130-bd4e-84da8bc05fc9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_MELTING_SECTION",
- "term": "http://semanticscience.org/resource/CHEMINF_000256",
- "title": "4.2 Melting point / freezing point"
- },
- "endpoint": "Melting Point",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Melting Point",
- "conditions": {
- "Decomposition": null,
- "Sublimation": null
- },
- "result": {
- "unit": "°C",
- "loQualifier": ">=",
- "loValue": 1600
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d6228eb8-afa7-438c-92b2-d9b264aee538.json b/test/data/enm/study-NWKI-d6228eb8-afa7-438c-92b2-d9b264aee538.json
deleted file mode 100644
index 7a91c71..0000000
--- a/test/data/enm/study-NWKI-d6228eb8-afa7-438c-92b2-d9b264aee538.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-d6228eb8-afa7-438c-92b2-d9b264aee538",
- "owner": {
- "substance": {
- "uuid": "NWKI-a40c7554-4bd8-3938-82a9-bf9db1f7bc13"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -45.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d6634dea-1f89-439a-b8e2-14039dea0262.json b/test/data/enm/study-NWKI-d6634dea-1f89-439a-b8e2-14039dea0262.json
deleted file mode 100644
index 6e01994..0000000
--- a/test/data/enm/study-NWKI-d6634dea-1f89-439a-b8e2-14039dea0262.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-d6634dea-1f89-439a-b8e2-14039dea0262",
- "owner": {
- "substance": {
- "uuid": "NWKI-ea2bb63b-fd2a-32c2-a41a-d0280abaf29f"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 15,
- "upQualifier": "<=",
- "upValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d67ffc65-30bd-4fa7-8a1a-c2f9560de597.json b/test/data/enm/study-NWKI-d67ffc65-30bd-4fa7-8a1a-c2f9560de597.json
deleted file mode 100644
index 7762122..0000000
--- a/test/data/enm/study-NWKI-d67ffc65-30bd-4fa7-8a1a-c2f9560de597.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-d67ffc65-30bd-4fa7-8a1a-c2f9560de597",
- "owner": {
- "substance": {
- "uuid": "NWKI-3d8aaa66-97d9-351b-9771-691300d5e97c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "Shape",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Anatase"
- },
- "effects": [
- {
- "endpoint": "SHAPE",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": null,
- "textValue": "Anatase"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d7937308-6dab-41ce-a8fc-7752c77293a2.json b/test/data/enm/study-NWKI-d7937308-6dab-41ce-a8fc-7752c77293a2.json
deleted file mode 100644
index 5763868..0000000
--- a/test/data/enm/study-NWKI-d7937308-6dab-41ce-a8fc-7752c77293a2.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-d7937308-6dab-41ce-a8fc-7752c77293a2",
- "owner": {
- "substance": {
- "uuid": "NWKI-5ae4ae3d-db28-3647-9a7a-0c2e3d8076aa"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -6.05
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d7aafa0b-c408-44e1-b288-9a479cb3dca1.json b/test/data/enm/study-NWKI-d7aafa0b-c408-44e1-b288-9a479cb3dca1.json
deleted file mode 100644
index 67738f0..0000000
--- a/test/data/enm/study-NWKI-d7aafa0b-c408-44e1-b288-9a479cb3dca1.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-d7aafa0b-c408-44e1-b288-9a479cb3dca1",
- "owner": {
- "substance": {
- "uuid": "NWKI-5e5ed57f-33d3-39bb-9511-3604a0babf5e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn2021056",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 12,
- "errorValue": 2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d80cd93a-4e4b-4957-a555-d6ef17f06b1b.json b/test/data/enm/study-NWKI-d80cd93a-4e4b-4957-a555-d6ef17f06b1b.json
deleted file mode 100644
index 44b7101..0000000
--- a/test/data/enm/study-NWKI-d80cd93a-4e4b-4957-a555-d6ef17f06b1b.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-d80cd93a-4e4b-4957-a555-d6ef17f06b1b",
- "owner": {
- "substance": {
- "uuid": "NWKI-c4c91023-5b41-3d6d-bb4f-ee1152926be0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 1000,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 70
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d8375116-28d0-4f57-84f8-91fe10910712.json b/test/data/enm/study-NWKI-d8375116-28d0-4f57-84f8-91fe10910712.json
deleted file mode 100644
index d37ce18..0000000
--- a/test/data/enm/study-NWKI-d8375116-28d0-4f57-84f8-91fe10910712.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-d8375116-28d0-4f57-84f8-91fe10910712",
- "owner": {
- "substance": {
- "uuid": "NWKI-c93a144a-cd6d-3fe0-ab86-13adb168ccb1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_MELTING_SECTION",
- "term": "http://semanticscience.org/resource/CHEMINF_000256",
- "title": "4.2 Melting point / freezing point"
- },
- "endpoint": "Melting Point",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Melting Point",
- "conditions": {
- "Decomposition": null,
- "Sublimation": null
- },
- "result": {
- "unit": "Celsius"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d8519fb8-dff7-4317-82e5-cdf3c99eeea8.json b/test/data/enm/study-NWKI-d8519fb8-dff7-4317-82e5-cdf3c99eeea8.json
deleted file mode 100644
index 9490b4f..0000000
--- a/test/data/enm/study-NWKI-d8519fb8-dff7-4317-82e5-cdf3c99eeea8.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-d8519fb8-dff7-4317-82e5-cdf3c99eeea8",
- "owner": {
- "substance": {
- "uuid": "NWKI-6cde234d-f073-3e1d-acd2-0ea10a01763f"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -44.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d86e6d2d-7cb2-4b9d-b196-3d6188634cc1.json b/test/data/enm/study-NWKI-d86e6d2d-7cb2-4b9d-b196-3d6188634cc1.json
deleted file mode 100644
index d685a62..0000000
--- a/test/data/enm/study-NWKI-d86e6d2d-7cb2-4b9d-b196-3d6188634cc1.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-d86e6d2d-7cb2-4b9d-b196-3d6188634cc1",
- "owner": {
- "substance": {
- "uuid": "NWKI-758c06ae-dc1f-3cbe-a409-91d14e5113d1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DED-2DVT750"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "VT750"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "VT750"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d88abc39-2ed8-4835-ad25-b23982c9ad4a.json b/test/data/enm/study-NWKI-d88abc39-2ed8-4835-ad25-b23982c9ad4a.json
deleted file mode 100644
index c4517bb..0000000
--- a/test/data/enm/study-NWKI-d88abc39-2ed8-4835-ad25-b23982c9ad4a.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-d88abc39-2ed8-4835-ad25-b23982c9ad4a",
- "owner": {
- "substance": {
- "uuid": "NWKI-08b685e5-70fa-39b5-87ad-092df4a60568"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -56.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d9006c65-1eec-4cc1-b274-1738400627ff.json b/test/data/enm/study-NWKI-d9006c65-1eec-4cc1-b274-1738400627ff.json
deleted file mode 100644
index d391ef1..0000000
--- a/test/data/enm/study-NWKI-d9006c65-1eec-4cc1-b274-1738400627ff.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-d9006c65-1eec-4cc1-b274-1738400627ff",
- "owner": {
- "substance": {
- "uuid": "NWKI-1c2fcc25-c597-3fab-b383-fb203ef4a69a"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 9.48,
- "errorValue": 1.26
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d9b323b6-cc7b-4d29-a03b-aad51389d92b.json b/test/data/enm/study-NWKI-d9b323b6-cc7b-4d29-a03b-aad51389d92b.json
deleted file mode 100644
index e90a8f4..0000000
--- a/test/data/enm/study-NWKI-d9b323b6-cc7b-4d29-a03b-aad51389d92b.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-d9b323b6-cc7b-4d29-a03b-aad51389d92b",
- "owner": {
- "substance": {
- "uuid": "NWKI-47d254de-8242-3374-9ed3-085227d473cc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DPEG-2DED-2DAminoSPARK680"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "ED"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "ED"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d9c32176-7528-4879-8bc4-930c8e965db1.json b/test/data/enm/study-NWKI-d9c32176-7528-4879-8bc4-930c8e965db1.json
deleted file mode 100644
index c00c4c9..0000000
--- a/test/data/enm/study-NWKI-d9c32176-7528-4879-8bc4-930c8e965db1.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-d9c32176-7528-4879-8bc4-930c8e965db1",
- "owner": {
- "substance": {
- "uuid": "NWKI-5454d5cb-1033-3d6f-a31e-038752525533"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 200
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d9cdbe0d-05e6-4d3b-8c05-1f957e5b317e.json b/test/data/enm/study-NWKI-d9cdbe0d-05e6-4d3b-8c05-1f957e5b317e.json
deleted file mode 100644
index 8f3ffd2..0000000
--- a/test/data/enm/study-NWKI-d9cdbe0d-05e6-4d3b-8c05-1f957e5b317e.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-d9cdbe0d-05e6-4d3b-8c05-1f957e5b317e",
- "owner": {
- "substance": {
- "uuid": "NWKI-8196e92b-c46d-3c14-9410-e87992810710"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "ED-2DPVA"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PVA"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-d9f7009b-c7da-4a61-b3d8-7d475465a081.json b/test/data/enm/study-NWKI-d9f7009b-c7da-4a61-b3d8-7d475465a081.json
deleted file mode 100644
index 447892e..0000000
--- a/test/data/enm/study-NWKI-d9f7009b-c7da-4a61-b3d8-7d475465a081.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-d9f7009b-c7da-4a61-b3d8-7d475465a081",
- "owner": {
- "substance": {
- "uuid": "NWKI-9a41ca03-303d-3116-89fb-2335cc1bad2d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Diameter",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Diameter",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 11
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-da0a27f7-bbfd-4f1f-a3a1-10d6a5994c9b.json b/test/data/enm/study-NWKI-da0a27f7-bbfd-4f1f-a3a1-10d6a5994c9b.json
deleted file mode 100644
index b7cf642..0000000
--- a/test/data/enm/study-NWKI-da0a27f7-bbfd-4f1f-a3a1-10d6a5994c9b.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-da0a27f7-bbfd-4f1f-a3a1-10d6a5994c9b",
- "owner": {
- "substance": {
- "uuid": "NWKI-9f37da26-8619-3eb1-9c29-e5f9ea09de54"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 100,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 95
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-da126db9-3a18-4d18-8c38-71486a8dac52.json b/test/data/enm/study-NWKI-da126db9-3a18-4d18-8c38-71486a8dac52.json
deleted file mode 100644
index fe194cc..0000000
--- a/test/data/enm/study-NWKI-da126db9-3a18-4d18-8c38-71486a8dac52.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-da126db9-3a18-4d18-8c38-71486a8dac52",
- "owner": {
- "substance": {
- "uuid": "NWKI-1c2fcc25-c597-3fab-b383-fb203ef4a69a"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": 46.7,
- "errorValue": 6.28
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-da94bc66-2353-4c5b-b79a-394b815a1032.json b/test/data/enm/study-NWKI-da94bc66-2353-4c5b-b79a-394b815a1032.json
deleted file mode 100644
index a692557..0000000
--- a/test/data/enm/study-NWKI-da94bc66-2353-4c5b-b79a-394b815a1032.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-da94bc66-2353-4c5b-b79a-394b815a1032",
- "owner": {
- "substance": {
- "uuid": "NWKI-80364e0e-be06-3645-a3ae-880ae0edddef"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 119,
- "errorValue": 16
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-daba0539-9011-4d0a-90d4-556ebd9d1a46.json b/test/data/enm/study-NWKI-daba0539-9011-4d0a-90d4-556ebd9d1a46.json
deleted file mode 100644
index 94e3115..0000000
--- a/test/data/enm/study-NWKI-daba0539-9011-4d0a-90d4-556ebd9d1a46.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-daba0539-9011-4d0a-90d4-556ebd9d1a46",
- "owner": {
- "substance": {
- "uuid": "NWKI-144a9226-4b93-36a9-ba2d-6b6c4903357b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null,
- "Serum": {
- "loValue": "sfMEM"
- }
- },
- "result": {
- "unit": "nm",
- "loValue": 160
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-daea095e-5bc5-4f7a-9955-3ea3f5987627.json b/test/data/enm/study-NWKI-daea095e-5bc5-4f7a-9955-3ea3f5987627.json
deleted file mode 100644
index d0c3489..0000000
--- a/test/data/enm/study-NWKI-daea095e-5bc5-4f7a-9955-3ea3f5987627.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-daea095e-5bc5-4f7a-9955-3ea3f5987627",
- "owner": {
- "substance": {
- "uuid": "NWKI-506de59a-ae92-361b-a934-0fdfa41101c0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DVT680-2DProtamine"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "VT680"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "VT680"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-db709cf9-ea1c-469d-b877-19ab2945430c.json b/test/data/enm/study-NWKI-db709cf9-ea1c-469d-b877-19ab2945430c.json
deleted file mode 100644
index b429934..0000000
--- a/test/data/enm/study-NWKI-db709cf9-ea1c-469d-b877-19ab2945430c.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-db709cf9-ea1c-469d-b877-19ab2945430c",
- "owner": {
- "substance": {
- "uuid": "NWKI-4dd2cfcb-0daf-33f7-ba67-f629e3019271"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -56
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-db74fd62-6078-4d38-acf0-c905ddd6f566.json b/test/data/enm/study-NWKI-db74fd62-6078-4d38-acf0-c905ddd6f566.json
deleted file mode 100644
index 88ab243..0000000
--- a/test/data/enm/study-NWKI-db74fd62-6078-4d38-acf0-c905ddd6f566.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-db74fd62-6078-4d38-acf0-c905ddd6f566",
- "owner": {
- "substance": {
- "uuid": "NWKI-705f070c-0c34-3638-803b-c5e85749bf53"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 32.7,
- "errorValue": 8.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-db7f8f08-cfb5-434d-a143-e629224adfec.json b/test/data/enm/study-NWKI-db7f8f08-cfb5-434d-a143-e629224adfec.json
deleted file mode 100644
index aea14e0..0000000
--- a/test/data/enm/study-NWKI-db7f8f08-cfb5-434d-a143-e629224adfec.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-db7f8f08-cfb5-434d-a143-e629224adfec",
- "owner": {
- "substance": {
- "uuid": "NWKI-a28e83ea-54da-3391-9bca-4a8891680403"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 5.6,
- "errorValue": 0.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-dbe3c3e5-d791-431b-b958-7e6330adee08.json b/test/data/enm/study-NWKI-dbe3c3e5-d791-431b-b958-7e6330adee08.json
deleted file mode 100644
index 9af2639..0000000
--- a/test/data/enm/study-NWKI-dbe3c3e5-d791-431b-b958-7e6330adee08.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-dbe3c3e5-d791-431b-b958-7e6330adee08",
- "owner": {
- "substance": {
- "uuid": "NWKI-8c5b9350-2c03-3173-9615-cabfbe6929c9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "BET",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 200
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-dcbe96d3-af8b-48e5-94c2-7c081c1b978a.json b/test/data/enm/study-NWKI-dcbe96d3-af8b-48e5-94c2-7c081c1b978a.json
deleted file mode 100644
index f14146e..0000000
--- a/test/data/enm/study-NWKI-dcbe96d3-af8b-48e5-94c2-7c081c1b978a.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-dcbe96d3-af8b-48e5-94c2-7c081c1b978a",
- "owner": {
- "substance": {
- "uuid": "NWKI-6b4d33a5-b573-3dbe-9ec3-9d2a9bc42a2e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": 86.8,
- "errorValue": 9.83
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-dcebdf50-3012-4f47-920f-e1b23004e3c2.json b/test/data/enm/study-NWKI-dcebdf50-3012-4f47-920f-e1b23004e3c2.json
deleted file mode 100644
index 59752b6..0000000
--- a/test/data/enm/study-NWKI-dcebdf50-3012-4f47-920f-e1b23004e3c2.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-dcebdf50-3012-4f47-920f-e1b23004e3c2",
- "owner": {
- "substance": {
- "uuid": "NWKI-8f7f774c-d727-33a9-adc6-9068524faf1c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 36
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-dd496293-9be8-440a-bc07-9291cd70f0ac.json b/test/data/enm/study-NWKI-dd496293-9be8-440a-bc07-9291cd70f0ac.json
deleted file mode 100644
index e28b1ac..0000000
--- a/test/data/enm/study-NWKI-dd496293-9be8-440a-bc07-9291cd70f0ac.json
+++ /dev/null
@@ -1,65 +0,0 @@
-{
- "uuid": "NWKI-dd496293-9be8-440a-bc07-9291cd70f0ac",
- "owner": {
- "substance": {
- "uuid": "NWKI-144a9226-4b93-36a9-ba2d-6b6c4903357b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "Serum": {
- "loValue": "PBS"
- },
- "pH": {
- "loValue": 7.11
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -22.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-dd500fc2-bd1d-4d86-8287-c900b9ea8e2e.json b/test/data/enm/study-NWKI-dd500fc2-bd1d-4d86-8287-c900b9ea8e2e.json
deleted file mode 100644
index f025230..0000000
--- a/test/data/enm/study-NWKI-dd500fc2-bd1d-4d86-8287-c900b9ea8e2e.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-dd500fc2-bd1d-4d86-8287-c900b9ea8e2e",
- "owner": {
- "substance": {
- "uuid": "NWKI-d1c31022-c044-30fa-931e-07d96b6f04b5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1080/10934520600966177",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loQualifier": ">=",
- "loValue": 45,
- "upQualifier": "<=",
- "upValue": 43
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-dd55b7cb-0a21-4d3c-98f7-fe0d8d20f242.json b/test/data/enm/study-NWKI-dd55b7cb-0a21-4d3c-98f7-fe0d8d20f242.json
deleted file mode 100644
index a6a7446..0000000
--- a/test/data/enm/study-NWKI-dd55b7cb-0a21-4d3c-98f7-fe0d8d20f242.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-dd55b7cb-0a21-4d3c-98f7-fe0d8d20f242",
- "owner": {
- "substance": {
- "uuid": "NWKI-de03994b-9d74-3e39-aa41-e7df34384442"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 150,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-dd5da5bf-8a6f-44c0-9779-5fd77bb917e1.json b/test/data/enm/study-NWKI-dd5da5bf-8a6f-44c0-9779-5fd77bb917e1.json
deleted file mode 100644
index e0d016b..0000000
--- a/test/data/enm/study-NWKI-dd5da5bf-8a6f-44c0-9779-5fd77bb917e1.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-dd5da5bf-8a6f-44c0-9779-5fd77bb917e1",
- "owner": {
- "substance": {
- "uuid": "NWKI-417f0133-8f2c-3255-bdcf-7d71ac295d00"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 50,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ddc8bdc0-b096-4f84-93ae-9f97c6c45e49.json b/test/data/enm/study-NWKI-ddc8bdc0-b096-4f84-93ae-9f97c6c45e49.json
deleted file mode 100644
index 1e84212..0000000
--- a/test/data/enm/study-NWKI-ddc8bdc0-b096-4f84-93ae-9f97c6c45e49.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-ddc8bdc0-b096-4f84-93ae-9f97c6c45e49",
- "owner": {
- "substance": {
- "uuid": "NWKI-bbb67d89-eaff-38ab-ba4f-403bfb064a0c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DED-2DSuccAminoSPARK680"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Succinylated_Amino_SPARK680"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Succinylated_Amino_SPARK680"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-de386b5b-748e-498c-9d9a-2b344e887980.json b/test/data/enm/study-NWKI-de386b5b-748e-498c-9d9a-2b344e887980.json
deleted file mode 100644
index eb5a8c1..0000000
--- a/test/data/enm/study-NWKI-de386b5b-748e-498c-9d9a-2b344e887980.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-de386b5b-748e-498c-9d9a-2b344e887980",
- "owner": {
- "substance": {
- "uuid": "NWKI-812e122b-8bee-350d-8aea-aaaa88ce84dd"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 18
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-de90d49e-4055-46b1-9c9f-3106a61306d8.json b/test/data/enm/study-NWKI-de90d49e-4055-46b1-9c9f-3106a61306d8.json
deleted file mode 100644
index efd15e7..0000000
--- a/test/data/enm/study-NWKI-de90d49e-4055-46b1-9c9f-3106a61306d8.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-de90d49e-4055-46b1-9c9f-3106a61306d8",
- "owner": {
- "substance": {
- "uuid": "NWKI-ae63c430-7a80-35c3-828d-c859d81ce698"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 132,
- "errorValue": 11
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-deb78580-7dbc-452a-a12b-e4b55b84ff8f.json b/test/data/enm/study-NWKI-deb78580-7dbc-452a-a12b-e4b55b84ff8f.json
deleted file mode 100644
index c339735..0000000
--- a/test/data/enm/study-NWKI-deb78580-7dbc-452a-a12b-e4b55b84ff8f.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-deb78580-7dbc-452a-a12b-e4b55b84ff8f",
- "owner": {
- "substance": {
- "uuid": "NWKI-c8d9772c-e50e-3c71-986c-e45692150d71"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DCOOH"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PVA"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-df09fcef-098d-4e01-9d19-0304cd36e96d.json b/test/data/enm/study-NWKI-df09fcef-098d-4e01-9d19-0304cd36e96d.json
deleted file mode 100644
index 2f1454d..0000000
--- a/test/data/enm/study-NWKI-df09fcef-098d-4e01-9d19-0304cd36e96d.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-df09fcef-098d-4e01-9d19-0304cd36e96d",
- "owner": {
- "substance": {
- "uuid": "NWKI-ad1d5068-29cd-3d8c-9ed0-44ed4ce06ddd"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DVT680"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-df697673-f97c-4bc6-9187-ea0a8cad201c.json b/test/data/enm/study-NWKI-df697673-f97c-4bc6-9187-ea0a8cad201c.json
deleted file mode 100644
index 983534a..0000000
--- a/test/data/enm/study-NWKI-df697673-f97c-4bc6-9187-ea0a8cad201c.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-df697673-f97c-4bc6-9187-ea0a8cad201c",
- "owner": {
- "substance": {
- "uuid": "NWKI-ca37d03d-af78-3982-8ca0-76025e71fcf1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.87
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-dfd0dabb-2867-4d2b-92c4-f80fc12f933f.json b/test/data/enm/study-NWKI-dfd0dabb-2867-4d2b-92c4-f80fc12f933f.json
deleted file mode 100644
index d27d94b..0000000
--- a/test/data/enm/study-NWKI-dfd0dabb-2867-4d2b-92c4-f80fc12f933f.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-dfd0dabb-2867-4d2b-92c4-f80fc12f933f",
- "owner": {
- "substance": {
- "uuid": "NWKI-417f0133-8f2c-3255-bdcf-7d71ac295d00"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 10,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e0b3dbc7-92eb-47b2-bacc-66c8ee3e589b.json b/test/data/enm/study-NWKI-e0b3dbc7-92eb-47b2-bacc-66c8ee3e589b.json
deleted file mode 100644
index 2b88c73..0000000
--- a/test/data/enm/study-NWKI-e0b3dbc7-92eb-47b2-bacc-66c8ee3e589b.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-e0b3dbc7-92eb-47b2-bacc-66c8ee3e589b",
- "owner": {
- "substance": {
- "uuid": "NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 12.5,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e1028d25-5223-4684-b42a-bbdcbbdbfedd.json b/test/data/enm/study-NWKI-e1028d25-5223-4684-b42a-bbdcbbdbfedd.json
deleted file mode 100644
index 2bed1d3..0000000
--- a/test/data/enm/study-NWKI-e1028d25-5223-4684-b42a-bbdcbbdbfedd.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-e1028d25-5223-4684-b42a-bbdcbbdbfedd",
- "owner": {
- "substance": {
- "uuid": "NWKI-b5385309-1812-33ad-a4cf-66d8d3a26bcc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 99,
- "errorValue": 9
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e140d5a5-9f7f-455e-a1c9-82ae07a4ba3e.json b/test/data/enm/study-NWKI-e140d5a5-9f7f-455e-a1c9-82ae07a4ba3e.json
deleted file mode 100644
index e6b0e45..0000000
--- a/test/data/enm/study-NWKI-e140d5a5-9f7f-455e-a1c9-82ae07a4ba3e.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-e140d5a5-9f7f-455e-a1c9-82ae07a4ba3e",
- "owner": {
- "substance": {
- "uuid": "NWKI-4dd2cfcb-0daf-33f7-ba67-f629e3019271"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "TEM",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 30.6,
- "errorValue": 6.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e147c87e-1b3f-4f86-96b9-20917e46a195.json b/test/data/enm/study-NWKI-e147c87e-1b3f-4f86-96b9-20917e46a195.json
deleted file mode 100644
index 91656b5..0000000
--- a/test/data/enm/study-NWKI-e147c87e-1b3f-4f86-96b9-20917e46a195.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-e147c87e-1b3f-4f86-96b9-20917e46a195",
- "owner": {
- "substance": {
- "uuid": "NWKI-ea2bb63b-fd2a-32c2-a41a-d0280abaf29f"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 3.51
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e1a5e9f3-2a77-4fb7-80b2-e84689f62c50.json b/test/data/enm/study-NWKI-e1a5e9f3-2a77-4fb7-80b2-e84689f62c50.json
deleted file mode 100644
index e0222f0..0000000
--- a/test/data/enm/study-NWKI-e1a5e9f3-2a77-4fb7-80b2-e84689f62c50.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-e1a5e9f3-2a77-4fb7-80b2-e84689f62c50",
- "owner": {
- "substance": {
- "uuid": "NWKI-90869553-c8fe-3ef6-8e68-47f392958127"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DCY55"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e1b6ba8e-5535-43b7-b82d-8356c6004d19.json b/test/data/enm/study-NWKI-e1b6ba8e-5535-43b7-b82d-8356c6004d19.json
deleted file mode 100644
index e0c118b..0000000
--- a/test/data/enm/study-NWKI-e1b6ba8e-5535-43b7-b82d-8356c6004d19.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-e1b6ba8e-5535-43b7-b82d-8356c6004d19",
- "owner": {
- "substance": {
- "uuid": "NWKI-ae67096a-fca6-3afc-bade-c362e3eeadc8"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn202116p",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 23,
- "errorValue": 7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e21b970a-2792-4017-bb1b-f2446adad084.json b/test/data/enm/study-NWKI-e21b970a-2792-4017-bb1b-f2446adad084.json
deleted file mode 100644
index ebbe332..0000000
--- a/test/data/enm/study-NWKI-e21b970a-2792-4017-bb1b-f2446adad084.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-e21b970a-2792-4017-bb1b-f2446adad084",
- "owner": {
- "substance": {
- "uuid": "NWKI-aeeb6004-b180-3b01-a9ab-68b64e19011b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn2021056",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 29.2,
- "errorValue": 10
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e22dd986-7128-4270-ad57-28d619a2db06.json b/test/data/enm/study-NWKI-e22dd986-7128-4270-ad57-28d619a2db06.json
deleted file mode 100644
index 0def525..0000000
--- a/test/data/enm/study-NWKI-e22dd986-7128-4270-ad57-28d619a2db06.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-e22dd986-7128-4270-ad57-28d619a2db06",
- "owner": {
- "substance": {
- "uuid": "NWKI-7181cc57-548a-3117-b59a-bfff2933c0b5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390.2015.1017022",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Average Length",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Average Length",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "μm",
- "loValue": 4.6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e2383ba1-c0f4-4bc1-9050-279188cbb332.json b/test/data/enm/study-NWKI-e2383ba1-c0f4-4bc1-9050-279188cbb332.json
deleted file mode 100644
index 1577a9b..0000000
--- a/test/data/enm/study-NWKI-e2383ba1-c0f4-4bc1-9050-279188cbb332.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-e2383ba1-c0f4-4bc1-9050-279188cbb332",
- "owner": {
- "substance": {
- "uuid": "NWKI-101f021f-b17b-3225-85c5-3cd2f9e5208d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 70,
- "upQualifier": "<=",
- "upValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e26d4379-6272-4aed-80f4-68e4c557dca5.json b/test/data/enm/study-NWKI-e26d4379-6272-4aed-80f4-68e4c557dca5.json
deleted file mode 100644
index 2b0595d..0000000
--- a/test/data/enm/study-NWKI-e26d4379-6272-4aed-80f4-68e4c557dca5.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-e26d4379-6272-4aed-80f4-68e4c557dca5",
- "owner": {
- "substance": {
- "uuid": "NWKI-aeeb6004-b180-3b01-a9ab-68b64e19011b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn2021056",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -14.6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e30588db-ff9b-42fa-ae5f-eba1238b82aa.json b/test/data/enm/study-NWKI-e30588db-ff9b-42fa-ae5f-eba1238b82aa.json
deleted file mode 100644
index 30c316e..0000000
--- a/test/data/enm/study-NWKI-e30588db-ff9b-42fa-ae5f-eba1238b82aa.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-e30588db-ff9b-42fa-ae5f-eba1238b82aa",
- "owner": {
- "substance": {
- "uuid": "NWKI-8a4b3e23-3327-3421-b20a-2e71939b44b1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 38
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e30bfa97-fb24-4adc-a85c-e377c1f4a28b.json b/test/data/enm/study-NWKI-e30bfa97-fb24-4adc-a85c-e377c1f4a28b.json
deleted file mode 100644
index 3c01b7a..0000000
--- a/test/data/enm/study-NWKI-e30bfa97-fb24-4adc-a85c-e377c1f4a28b.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-e30bfa97-fb24-4adc-a85c-e377c1f4a28b",
- "owner": {
- "substance": {
- "uuid": "NWKI-0a6e319e-71fc-37f7-b88d-fbda2e07ccc1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": 44,
- "errorValue": 1.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e320cebf-22f8-447a-9546-62c66dff6321.json b/test/data/enm/study-NWKI-e320cebf-22f8-447a-9546-62c66dff6321.json
deleted file mode 100644
index bb3f2a8..0000000
--- a/test/data/enm/study-NWKI-e320cebf-22f8-447a-9546-62c66dff6321.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-e320cebf-22f8-447a-9546-62c66dff6321",
- "owner": {
- "substance": {
- "uuid": "NWKI-c4c91023-5b41-3d6d-bb4f-ee1152926be0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 3333,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e32cde8a-54cd-420c-9af5-7b6aa10f7709.json b/test/data/enm/study-NWKI-e32cde8a-54cd-420c-9af5-7b6aa10f7709.json
deleted file mode 100644
index cd41a3c..0000000
--- a/test/data/enm/study-NWKI-e32cde8a-54cd-420c-9af5-7b6aa10f7709.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-e32cde8a-54cd-420c-9af5-7b6aa10f7709",
- "owner": {
- "substance": {
- "uuid": "NWKI-812e122b-8bee-350d-8aea-aaaa88ce84dd"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 150,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e33e16a3-e454-4cb2-bcc4-38d655c6eebd.json b/test/data/enm/study-NWKI-e33e16a3-e454-4cb2-bcc4-38d655c6eebd.json
deleted file mode 100644
index d477778..0000000
--- a/test/data/enm/study-NWKI-e33e16a3-e454-4cb2-bcc4-38d655c6eebd.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-e33e16a3-e454-4cb2-bcc4-38d655c6eebd",
- "owner": {
- "substance": {
- "uuid": "NWKI-ff85c0ea-c908-35c8-9f1c-bfd037800a31"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "TEM",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 31.2,
- "errorValue": 4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e3c1dfe2-2c80-4060-8c50-af6421bfd759.json b/test/data/enm/study-NWKI-e3c1dfe2-2c80-4060-8c50-af6421bfd759.json
deleted file mode 100644
index c1e608c..0000000
--- a/test/data/enm/study-NWKI-e3c1dfe2-2c80-4060-8c50-af6421bfd759.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-e3c1dfe2-2c80-4060-8c50-af6421bfd759",
- "owner": {
- "substance": {
- "uuid": "NWKI-e518c122-5f4f-3611-8b30-56b671883e5c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -6.75
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e43d32f2-ae16-4616-bf39-1621decccad1.json b/test/data/enm/study-NWKI-e43d32f2-ae16-4616-bf39-1621decccad1.json
deleted file mode 100644
index eb8cbd1..0000000
--- a/test/data/enm/study-NWKI-e43d32f2-ae16-4616-bf39-1621decccad1.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-e43d32f2-ae16-4616-bf39-1621decccad1",
- "owner": {
- "substance": {
- "uuid": "NWKI-69b604fb-e892-31ba-a6f5-feb6cb04effb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": 1.95
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e45646a0-dfc1-45c9-84b2-d7ce19efcc2f.json b/test/data/enm/study-NWKI-e45646a0-dfc1-45c9-84b2-d7ce19efcc2f.json
deleted file mode 100644
index 975c76b..0000000
--- a/test/data/enm/study-NWKI-e45646a0-dfc1-45c9-84b2-d7ce19efcc2f.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-e45646a0-dfc1-45c9-84b2-d7ce19efcc2f",
- "owner": {
- "substance": {
- "uuid": "NWKI-44b3fa7b-1667-3f4a-9e31-7a5202320cf3"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -48.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e48a654a-65fd-429c-b366-efbd13e1d798.json b/test/data/enm/study-NWKI-e48a654a-65fd-429c-b366-efbd13e1d798.json
deleted file mode 100644
index a6e0e24..0000000
--- a/test/data/enm/study-NWKI-e48a654a-65fd-429c-b366-efbd13e1d798.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-e48a654a-65fd-429c-b366-efbd13e1d798",
- "owner": {
- "substance": {
- "uuid": "NWKI-0494174f-9fc2-3296-8ffb-4fadaceb0348"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn202116p",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 18,
- "errorValue": 5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e49fd474-935c-4ca5-b755-884722787ee5.json b/test/data/enm/study-NWKI-e49fd474-935c-4ca5-b755-884722787ee5.json
deleted file mode 100644
index 142f11d..0000000
--- a/test/data/enm/study-NWKI-e49fd474-935c-4ca5-b755-884722787ee5.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-e49fd474-935c-4ca5-b755-884722787ee5",
- "owner": {
- "substance": {
- "uuid": "NWKI-6cab56b4-69d9-36e0-8c17-f467d08b2555"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e4bf86b6-5269-409e-a8ae-f551158f8cb3.json b/test/data/enm/study-NWKI-e4bf86b6-5269-409e-a8ae-f551158f8cb3.json
deleted file mode 100644
index e459dab..0000000
--- a/test/data/enm/study-NWKI-e4bf86b6-5269-409e-a8ae-f551158f8cb3.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-e4bf86b6-5269-409e-a8ae-f551158f8cb3",
- "owner": {
- "substance": {
- "uuid": "NWKI-02981dd4-b7d0-34c8-a0ab-dd19a5a40865"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "DextranCoating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e536a891-5802-420c-8cfa-c23251726ee4.json b/test/data/enm/study-NWKI-e536a891-5802-420c-8cfa-c23251726ee4.json
deleted file mode 100644
index 3e57dd7..0000000
--- a/test/data/enm/study-NWKI-e536a891-5802-420c-8cfa-c23251726ee4.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-e536a891-5802-420c-8cfa-c23251726ee4",
- "owner": {
- "substance": {
- "uuid": "NWKI-4fa19c49-f3b1-3e34-8aa4-3da258933bf8"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 12.8,
- "errorValue": 3.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e5772c16-6c45-4b96-8873-b920f0af25de.json b/test/data/enm/study-NWKI-e5772c16-6c45-4b96-8873-b920f0af25de.json
deleted file mode 100644
index 568f70f..0000000
--- a/test/data/enm/study-NWKI-e5772c16-6c45-4b96-8873-b920f0af25de.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-e5772c16-6c45-4b96-8873-b920f0af25de",
- "owner": {
- "substance": {
- "uuid": "NWKI-863267cf-faf0-349b-8046-6074d2e718b5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.soilbio.2013.01.016",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 61
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e5f9a72e-5f64-4fa9-b350-a64ec8ada63f.json b/test/data/enm/study-NWKI-e5f9a72e-5f64-4fa9-b350-a64ec8ada63f.json
deleted file mode 100644
index a0873ee..0000000
--- a/test/data/enm/study-NWKI-e5f9a72e-5f64-4fa9-b350-a64ec8ada63f.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-e5f9a72e-5f64-4fa9-b350-a64ec8ada63f",
- "owner": {
- "substance": {
- "uuid": "NWKI-506de59a-ae92-361b-a934-0fdfa41101c0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -6.11
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e623f359-40a7-45d7-8dd2-703a80de86c4.json b/test/data/enm/study-NWKI-e623f359-40a7-45d7-8dd2-703a80de86c4.json
deleted file mode 100644
index af1626b..0000000
--- a/test/data/enm/study-NWKI-e623f359-40a7-45d7-8dd2-703a80de86c4.json
+++ /dev/null
@@ -1,65 +0,0 @@
-{
- "uuid": "NWKI-e623f359-40a7-45d7-8dd2-703a80de86c4",
- "owner": {
- "substance": {
- "uuid": "NWKI-916751bb-8457-3844-87c0-ada4c6afd1ab"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "Serum": {
- "loValue": "cMEM"
- },
- "pH": {
- "loValue": 7.83
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -10
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e66100d6-ab2b-4207-9ed1-aae1e2a8caf4.json b/test/data/enm/study-NWKI-e66100d6-ab2b-4207-9ed1-aae1e2a8caf4.json
deleted file mode 100644
index a821e4b..0000000
--- a/test/data/enm/study-NWKI-e66100d6-ab2b-4207-9ed1-aae1e2a8caf4.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-e66100d6-ab2b-4207-9ed1-aae1e2a8caf4",
- "owner": {
- "substance": {
- "uuid": "NWKI-e4dab3d9-2699-3a0b-9e9c-f257088142cc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 0.75,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e66557c3-f380-4f87-ad2c-7a943571224a.json b/test/data/enm/study-NWKI-e66557c3-f380-4f87-ad2c-7a943571224a.json
deleted file mode 100644
index 7acf823..0000000
--- a/test/data/enm/study-NWKI-e66557c3-f380-4f87-ad2c-7a943571224a.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-e66557c3-f380-4f87-ad2c-7a943571224a",
- "owner": {
- "substance": {
- "uuid": "NWKI-7031754f-5bb6-3594-8a32-0c03256cdf61"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -47.6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e6c69c36-e724-4af9-8501-a313510dc632.json b/test/data/enm/study-NWKI-e6c69c36-e724-4af9-8501-a313510dc632.json
deleted file mode 100644
index ebd61a3..0000000
--- a/test/data/enm/study-NWKI-e6c69c36-e724-4af9-8501-a313510dc632.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-e6c69c36-e724-4af9-8501-a313510dc632",
- "owner": {
- "substance": {
- "uuid": "NWKI-8a968835-50ab-33df-bf5e-42de32d01c15"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Colon HT29",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 60,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 24
- }
- },
- "result": {
- "unit": null,
- "loValue": 95
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e754b05e-be94-4cce-a33d-19173e404ca1.json b/test/data/enm/study-NWKI-e754b05e-be94-4cce-a33d-19173e404ca1.json
deleted file mode 100644
index 868da04..0000000
--- a/test/data/enm/study-NWKI-e754b05e-be94-4cce-a33d-19173e404ca1.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-e754b05e-be94-4cce-a33d-19173e404ca1",
- "owner": {
- "substance": {
- "uuid": "NWKI-83a75181-9103-3ef9-aec7-fa38074580f6"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -71.8,
- "errorValue": 11.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e7692ca8-09d6-4c84-a069-6f57200ab2e0.json b/test/data/enm/study-NWKI-e7692ca8-09d6-4c84-a069-6f57200ab2e0.json
deleted file mode 100644
index a276ba7..0000000
--- a/test/data/enm/study-NWKI-e7692ca8-09d6-4c84-a069-6f57200ab2e0.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-e7692ca8-09d6-4c84-a069-6f57200ab2e0",
- "owner": {
- "substance": {
- "uuid": "NWKI-8a968835-50ab-33df-bf5e-42de32d01c15"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Colon HT29",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 600,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 4
- }
- },
- "result": {
- "unit": null,
- "loValue": 102
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e79f5a52-5c63-4532-87d0-62e15f4ea72b.json b/test/data/enm/study-NWKI-e79f5a52-5c63-4532-87d0-62e15f4ea72b.json
deleted file mode 100644
index 8f856f0..0000000
--- a/test/data/enm/study-NWKI-e79f5a52-5c63-4532-87d0-62e15f4ea72b.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-e79f5a52-5c63-4532-87d0-62e15f4ea72b",
- "owner": {
- "substance": {
- "uuid": "NWKI-395bf212-b710-3385-9c23-715a7055b015"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "LDH Release",
- "guideline": [
- "Lactate Dehydrogenase Activity"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Lactate Dehydrogenase Activity"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "LDH_Release",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e802e276-7b5c-46b5-b825-5e61aa184245.json b/test/data/enm/study-NWKI-e802e276-7b5c-46b5-b825-5e61aa184245.json
deleted file mode 100644
index 8ae54c2..0000000
--- a/test/data/enm/study-NWKI-e802e276-7b5c-46b5-b825-5e61aa184245.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-e802e276-7b5c-46b5-b825-5e61aa184245",
- "owner": {
- "substance": {
- "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 600,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 24
- }
- },
- "result": {
- "unit": null,
- "loValue": 15
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e84ae886-79f5-4736-b2ff-187f21424841.json b/test/data/enm/study-NWKI-e84ae886-79f5-4736-b2ff-187f21424841.json
deleted file mode 100644
index 18949fe..0000000
--- a/test/data/enm/study-NWKI-e84ae886-79f5-4736-b2ff-187f21424841.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-e84ae886-79f5-4736-b2ff-187f21424841",
- "owner": {
- "substance": {
- "uuid": "NWKI-d8f70c6c-3496-3ad3-8ab3-e4f08a178d30"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 150,
- "errorValue": 0.6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e87408ad-fb53-45b5-88ce-d6c95bcefafb.json b/test/data/enm/study-NWKI-e87408ad-fb53-45b5-88ce-d6c95bcefafb.json
deleted file mode 100644
index cbaf237..0000000
--- a/test/data/enm/study-NWKI-e87408ad-fb53-45b5-88ce-d6c95bcefafb.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-e87408ad-fb53-45b5-88ce-d6c95bcefafb",
- "owner": {
- "substance": {
- "uuid": "NWKI-e93603a1-8e0d-372a-8acf-48533b86ecb5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es051043o",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002993_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002993",
- "title": "BAO_0002993 Cytotoxicity Assay"
- },
- "endpoint": "Concentration in cell",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Concentration_in_cell",
- "conditions": {
- "Concentration in culture medium": {
- "loValue": 100,
- "unit": "ng/g"
- },
- "Time": {
- "loValue": 1,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 27
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e8912d4d-3491-46ef-8171-8fe1442e9136.json b/test/data/enm/study-NWKI-e8912d4d-3491-46ef-8171-8fe1442e9136.json
deleted file mode 100644
index 7cd5346..0000000
--- a/test/data/enm/study-NWKI-e8912d4d-3491-46ef-8171-8fe1442e9136.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-e8912d4d-3491-46ef-8171-8fe1442e9136",
- "owner": {
- "substance": {
- "uuid": "NWKI-e93a9eb3-83df-3522-b417-7b3a379054a6"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Diameter",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Diameter",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 9.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e8a0ef87-e997-4b5c-8e9d-38d04fc062a5.json b/test/data/enm/study-NWKI-e8a0ef87-e997-4b5c-8e9d-38d04fc062a5.json
deleted file mode 100644
index ffbff6a..0000000
--- a/test/data/enm/study-NWKI-e8a0ef87-e997-4b5c-8e9d-38d04fc062a5.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "NWKI-e8a0ef87-e997-4b5c-8e9d-38d04fc062a5",
- "owner": {
- "substance": {
- "uuid": "NWKI-2a046d54-ea47-31b2-a370-e886e5a0a6bb"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "BiotinCoating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "RCOOH"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "O=CO[H]"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "RCOOH"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e8a71c08-fd85-4399-af9f-bc3233a8e111.json b/test/data/enm/study-NWKI-e8a71c08-fd85-4399-af9f-bc3233a8e111.json
deleted file mode 100644
index 272159c..0000000
--- a/test/data/enm/study-NWKI-e8a71c08-fd85-4399-af9f-bc3233a8e111.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "NWKI-e8a71c08-fd85-4399-af9f-bc3233a8e111",
- "owner": {
- "substance": {
- "uuid": "NWKI-3481f716-18fa-39b3-aa54-4acb67877194"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DGlycine"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Glycine"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "C(C(=O)O)N"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Glycine"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e8fcf88e-c52d-4be4-992d-fd731ffc5144.json b/test/data/enm/study-NWKI-e8fcf88e-c52d-4be4-992d-fd731ffc5144.json
deleted file mode 100644
index 7bf834f..0000000
--- a/test/data/enm/study-NWKI-e8fcf88e-c52d-4be4-992d-fd731ffc5144.json
+++ /dev/null
@@ -1,73 +0,0 @@
-{
- "uuid": "NWKI-e8fcf88e-c52d-4be4-992d-fd731ffc5144",
- "owner": {
- "substance": {
- "uuid": "NWKI-5adec23a-ab6a-350e-baec-cd088a4667d5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "COOH-2DAmphPolymer"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "COOH"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "O=CO[H]"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "COOH"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e93beeb2-1448-497f-9931-56afc2834747.json b/test/data/enm/study-NWKI-e93beeb2-1448-497f-9931-56afc2834747.json
deleted file mode 100644
index 896a987..0000000
--- a/test/data/enm/study-NWKI-e93beeb2-1448-497f-9931-56afc2834747.json
+++ /dev/null
@@ -1,55 +0,0 @@
-{
- "uuid": "NWKI-e93beeb2-1448-497f-9931-56afc2834747",
- "owner": {
- "substance": {
- "uuid": "NWKI-6e6a5fec-23c2-3fff-8522-a22689091196"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_MELTING_SECTION",
- "term": "http://semanticscience.org/resource/CHEMINF_000256",
- "title": "4.2 Melting point / freezing point"
- },
- "endpoint": "Melting Point",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Melting Point",
- "conditions": {
- "Decomposition": null,
- "Sublimation": null
- },
- "result": {
- "unit": "°C",
- "loQualifier": ">=",
- "loValue": 1600
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e950a396-9e0d-43e3-a6fd-9d3b5c32f83e.json b/test/data/enm/study-NWKI-e950a396-9e0d-43e3-a6fd-9d3b5c32f83e.json
deleted file mode 100644
index 43a4885..0000000
--- a/test/data/enm/study-NWKI-e950a396-9e0d-43e3-a6fd-9d3b5c32f83e.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-e950a396-9e0d-43e3-a6fd-9d3b5c32f83e",
- "owner": {
- "substance": {
- "uuid": "NWKI-30a91305-4a0d-3d7b-a399-6d5b3ee0d641"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 29.5,
- "errorValue": 6.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e96f3a5f-d334-4e90-9523-ed67d33e6f76.json b/test/data/enm/study-NWKI-e96f3a5f-d334-4e90-9523-ed67d33e6f76.json
deleted file mode 100644
index c2d3147..0000000
--- a/test/data/enm/study-NWKI-e96f3a5f-d334-4e90-9523-ed67d33e6f76.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-e96f3a5f-d334-4e90-9523-ed67d33e6f76",
- "owner": {
- "substance": {
- "uuid": "NWKI-09e3ff87-f9a0-34dc-955e-e8b8474fb12b"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.envpol.2008.11.004",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 285
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e9ae71d3-fd50-4f4e-bef9-9063b1f1297d.json b/test/data/enm/study-NWKI-e9ae71d3-fd50-4f4e-bef9-9063b1f1297d.json
deleted file mode 100644
index a3b07bc..0000000
--- a/test/data/enm/study-NWKI-e9ae71d3-fd50-4f4e-bef9-9063b1f1297d.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "NWKI-e9ae71d3-fd50-4f4e-bef9-9063b1f1297d",
- "owner": {
- "substance": {
- "uuid": "NWKI-605f4f43-028b-3a42-ae94-9852a9f6f5f8"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn301622h",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 7
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -48,
- "errorValue": 2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e9c11fe6-5416-4cfc-a156-9a90788b2709.json b/test/data/enm/study-NWKI-e9c11fe6-5416-4cfc-a156-9a90788b2709.json
deleted file mode 100644
index 7eebf6d..0000000
--- a/test/data/enm/study-NWKI-e9c11fe6-5416-4cfc-a156-9a90788b2709.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-e9c11fe6-5416-4cfc-a156-9a90788b2709",
- "owner": {
- "substance": {
- "uuid": "NWKI-0455b6e1-5203-37bb-a98b-20460acceda1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DCY35-2DTat"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Tat"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Tat"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e9eecdcb-5179-4160-8e90-268db1c378a7.json b/test/data/enm/study-NWKI-e9eecdcb-5179-4160-8e90-268db1c378a7.json
deleted file mode 100644
index 28ee2a5..0000000
--- a/test/data/enm/study-NWKI-e9eecdcb-5179-4160-8e90-268db1c378a7.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-e9eecdcb-5179-4160-8e90-268db1c378a7",
- "owner": {
- "substance": {
- "uuid": "NWKI-c5e226b0-d405-32d5-a652-7f7f1f0eb55d"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 91.9,
- "errorValue": 4.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-e9f56dd0-29d1-4ddc-a4fe-6c740f8a07de.json b/test/data/enm/study-NWKI-e9f56dd0-29d1-4ddc-a4fe-6c740f8a07de.json
deleted file mode 100644
index acbcf27..0000000
--- a/test/data/enm/study-NWKI-e9f56dd0-29d1-4ddc-a4fe-6c740f8a07de.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-e9f56dd0-29d1-4ddc-a4fe-6c740f8a07de",
- "owner": {
- "substance": {
- "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Colon HT29",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 60,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 8
- }
- },
- "result": {
- "unit": null,
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ea31baba-b673-423e-a37c-4b9d21494550.json b/test/data/enm/study-NWKI-ea31baba-b673-423e-a37c-4b9d21494550.json
deleted file mode 100644
index 1daaaf9..0000000
--- a/test/data/enm/study-NWKI-ea31baba-b673-423e-a37c-4b9d21494550.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-ea31baba-b673-423e-a37c-4b9d21494550",
- "owner": {
- "substance": {
- "uuid": "NWKI-4beee533-65e4-364a-adb7-7a520180de61"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "ZnO"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "ZnO"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Triethoxycaprylsilane_Coating"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Triethoxycaprylsilane"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Triethoxycaprylsilane"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ea56f38e-663f-4bdc-ab4a-1d9f204e7477.json b/test/data/enm/study-NWKI-ea56f38e-663f-4bdc-ab4a-1d9f204e7477.json
deleted file mode 100644
index 4d794ea..0000000
--- a/test/data/enm/study-NWKI-ea56f38e-663f-4bdc-ab4a-1d9f204e7477.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-ea56f38e-663f-4bdc-ab4a-1d9f204e7477",
- "owner": {
- "substance": {
- "uuid": "NWKI-c7bee4e3-8884-3e29-ad8b-38decf6146fd"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -14
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ea6de4e4-954d-44f6-9b52-82cbd8a646a0.json b/test/data/enm/study-NWKI-ea6de4e4-954d-44f6-9b52-82cbd8a646a0.json
deleted file mode 100644
index 803457e..0000000
--- a/test/data/enm/study-NWKI-ea6de4e4-954d-44f6-9b52-82cbd8a646a0.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-ea6de4e4-954d-44f6-9b52-82cbd8a646a0",
- "owner": {
- "substance": {
- "uuid": "NWKI-97103918-5eeb-36a3-9981-3aa6dcef5d4c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-eb7ec2b5-8964-4b78-88ac-4095399c8b33.json b/test/data/enm/study-NWKI-eb7ec2b5-8964-4b78-88ac-4095399c8b33.json
deleted file mode 100644
index 93b5504..0000000
--- a/test/data/enm/study-NWKI-eb7ec2b5-8964-4b78-88ac-4095399c8b33.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-eb7ec2b5-8964-4b78-88ac-4095399c8b33",
- "owner": {
- "substance": {
- "uuid": "NWKI-3ccb7313-0905-322a-ac62-09adb667bc0f"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 300
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ebafaab1-1dc2-41af-8065-393cb37943a0.json b/test/data/enm/study-NWKI-ebafaab1-1dc2-41af-8065-393cb37943a0.json
deleted file mode 100644
index 2d709f4..0000000
--- a/test/data/enm/study-NWKI-ebafaab1-1dc2-41af-8065-393cb37943a0.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-ebafaab1-1dc2-41af-8065-393cb37943a0",
- "owner": {
- "substance": {
- "uuid": "NWKI-bb97285c-a58f-34c0-aa16-d5eac02280fa"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -73.7,
- "errorValue": 17.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ec8a860b-5c0c-4f89-a591-eacdf9757dcd.json b/test/data/enm/study-NWKI-ec8a860b-5c0c-4f89-a591-eacdf9757dcd.json
deleted file mode 100644
index e27010b..0000000
--- a/test/data/enm/study-NWKI-ec8a860b-5c0c-4f89-a591-eacdf9757dcd.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-ec8a860b-5c0c-4f89-a591-eacdf9757dcd",
- "owner": {
- "substance": {
- "uuid": "NWKI-61515bd0-5a80-3428-a093-01be1d677862"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 112,
- "errorValue": 10
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ed524437-e91a-4ca4-951c-b3962ee96a20.json b/test/data/enm/study-NWKI-ed524437-e91a-4ca4-951c-b3962ee96a20.json
deleted file mode 100644
index 201fcd5..0000000
--- a/test/data/enm/study-NWKI-ed524437-e91a-4ca4-951c-b3962ee96a20.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-ed524437-e91a-4ca4-951c-b3962ee96a20",
- "owner": {
- "substance": {
- "uuid": "NWKI-b110d018-6de0-303b-afcc-6a5e1f5911aa"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ed96c06b-0775-4992-9d55-9cb401e8b27c.json b/test/data/enm/study-NWKI-ed96c06b-0775-4992-9d55-9cb401e8b27c.json
deleted file mode 100644
index 959e7f9..0000000
--- a/test/data/enm/study-NWKI-ed96c06b-0775-4992-9d55-9cb401e8b27c.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "NWKI-ed96c06b-0775-4992-9d55-9cb401e8b27c",
- "owner": {
- "substance": {
- "uuid": "NWKI-e518c122-5f4f-3611-8b30-56b671883e5c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DED-2DAminoSPARK680"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PVA"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-edb48b72-618c-48f2-bda2-27e0c54780ca.json b/test/data/enm/study-NWKI-edb48b72-618c-48f2-bda2-27e0c54780ca.json
deleted file mode 100644
index 2d768cf..0000000
--- a/test/data/enm/study-NWKI-edb48b72-618c-48f2-bda2-27e0c54780ca.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-edb48b72-618c-48f2-bda2-27e0c54780ca",
- "owner": {
- "substance": {
- "uuid": "NWKI-e078849d-6137-33fc-b103-d458cb77184a"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn301622h",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "TEM",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 42,
- "errorValue": 3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ee0e465d-b789-499c-aba3-c7c6f017fec6.json b/test/data/enm/study-NWKI-ee0e465d-b789-499c-aba3-c7c6f017fec6.json
deleted file mode 100644
index 5fe2033..0000000
--- a/test/data/enm/study-NWKI-ee0e465d-b789-499c-aba3-c7c6f017fec6.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-ee0e465d-b789-499c-aba3-c7c6f017fec6",
- "owner": {
- "substance": {
- "uuid": "NWKI-0b16e14c-47ab-3075-afc4-0713d06aa54c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -16.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ee6e915f-27fe-47f6-b0a2-b6a34d63360c.json b/test/data/enm/study-NWKI-ee6e915f-27fe-47f6-b0a2-b6a34d63360c.json
deleted file mode 100644
index 4bdd5e4..0000000
--- a/test/data/enm/study-NWKI-ee6e915f-27fe-47f6-b0a2-b6a34d63360c.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-ee6e915f-27fe-47f6-b0a2-b6a34d63360c",
- "owner": {
- "substance": {
- "uuid": "NWKI-57943982-0642-388c-be22-f1770d3b620c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 66
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-eeeeb0a4-1916-4f36-8179-13e6ae2acafb.json b/test/data/enm/study-NWKI-eeeeb0a4-1916-4f36-8179-13e6ae2acafb.json
deleted file mode 100644
index fd17a5c..0000000
--- a/test/data/enm/study-NWKI-eeeeb0a4-1916-4f36-8179-13e6ae2acafb.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-eeeeb0a4-1916-4f36-8179-13e6ae2acafb",
- "owner": {
- "substance": {
- "uuid": "NWKI-812e122b-8bee-350d-8aea-aaaa88ce84dd"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 50,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-eef63f55-589e-4f39-9981-16b5e109b518.json b/test/data/enm/study-NWKI-eef63f55-589e-4f39-9981-16b5e109b518.json
deleted file mode 100644
index 1542ad2..0000000
--- a/test/data/enm/study-NWKI-eef63f55-589e-4f39-9981-16b5e109b518.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-eef63f55-589e-4f39-9981-16b5e109b518",
- "owner": {
- "substance": {
- "uuid": "NWKI-82c12809-d7af-3061-a531-1db744c521f0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 37
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ef4230e8-9345-4e2d-8ff8-ab9347a680f4.json b/test/data/enm/study-NWKI-ef4230e8-9345-4e2d-8ff8-ab9347a680f4.json
deleted file mode 100644
index a7fe31e..0000000
--- a/test/data/enm/study-NWKI-ef4230e8-9345-4e2d-8ff8-ab9347a680f4.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-ef4230e8-9345-4e2d-8ff8-ab9347a680f4",
- "owner": {
- "substance": {
- "uuid": "NWKI-52edeff5-900d-3f5a-86ba-550e9b368239"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 5,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ef4d1512-aa17-48f1-be53-08cfb0868848.json b/test/data/enm/study-NWKI-ef4d1512-aa17-48f1-be53-08cfb0868848.json
deleted file mode 100644
index 5504411..0000000
--- a/test/data/enm/study-NWKI-ef4d1512-aa17-48f1-be53-08cfb0868848.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-ef4d1512-aa17-48f1-be53-08cfb0868848",
- "owner": {
- "substance": {
- "uuid": "NWKI-8ef21404-e101-37c8-8206-32f526d75012"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 10
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ef516d0f-83b9-4325-9568-401a03384707.json b/test/data/enm/study-NWKI-ef516d0f-83b9-4325-9568-401a03384707.json
deleted file mode 100644
index a57ae76..0000000
--- a/test/data/enm/study-NWKI-ef516d0f-83b9-4325-9568-401a03384707.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-ef516d0f-83b9-4325-9568-401a03384707",
- "owner": {
- "substance": {
- "uuid": "NWKI-984a9c7f-2372-3b8f-9ff5-93a9f94f2eb7"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn202116p",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 40,
- "errorValue": 12
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-efd2642b-ae04-4bf4-a43e-d43799c9bdce.json b/test/data/enm/study-NWKI-efd2642b-ae04-4bf4-a43e-d43799c9bdce.json
deleted file mode 100644
index 1d75695..0000000
--- a/test/data/enm/study-NWKI-efd2642b-ae04-4bf4-a43e-d43799c9bdce.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-efd2642b-ae04-4bf4-a43e-d43799c9bdce",
- "owner": {
- "substance": {
- "uuid": "NWKI-97103918-5eeb-36a3-9981-3aa6dcef5d4c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 1,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f00c75cc-5a1b-47b5-8ae1-8ae1db6d98ae.json b/test/data/enm/study-NWKI-f00c75cc-5a1b-47b5-8ae1-8ae1db6d98ae.json
deleted file mode 100644
index d91e93a..0000000
--- a/test/data/enm/study-NWKI-f00c75cc-5a1b-47b5-8ae1-8ae1db6d98ae.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-f00c75cc-5a1b-47b5-8ae1-8ae1db6d98ae",
- "owner": {
- "substance": {
- "uuid": "NWKI-e4dab3d9-2699-3a0b-9e9c-f257088142cc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 12.5,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f083093f-b798-43b1-a9a5-774ca6a07ace.json b/test/data/enm/study-NWKI-f083093f-b798-43b1-a9a5-774ca6a07ace.json
deleted file mode 100644
index 9e58453..0000000
--- a/test/data/enm/study-NWKI-f083093f-b798-43b1-a9a5-774ca6a07ace.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-f083093f-b798-43b1-a9a5-774ca6a07ace",
- "owner": {
- "substance": {
- "uuid": "NWKI-97103918-5eeb-36a3-9981-3aa6dcef5d4c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 50,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f0c20fa3-8c0b-4395-b633-0116213e3792.json b/test/data/enm/study-NWKI-f0c20fa3-8c0b-4395-b633-0116213e3792.json
deleted file mode 100644
index 5ca4601..0000000
--- a/test/data/enm/study-NWKI-f0c20fa3-8c0b-4395-b633-0116213e3792.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-f0c20fa3-8c0b-4395-b633-0116213e3792",
- "owner": {
- "substance": {
- "uuid": "NWKI-4358aa69-dec1-387a-b7ea-2238198ccdff"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null,
- "Serum": {
- "loValue": "cMEM"
- }
- },
- "result": {
- "unit": "nm",
- "loValue": 166
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f17de7b3-3545-4488-a373-01a207c8230b.json b/test/data/enm/study-NWKI-f17de7b3-3545-4488-a373-01a207c8230b.json
deleted file mode 100644
index a5e34e9..0000000
--- a/test/data/enm/study-NWKI-f17de7b3-3545-4488-a373-01a207c8230b.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "NWKI-f17de7b3-3545-4488-a373-01a207c8230b",
- "owner": {
- "substance": {
- "uuid": "NWKI-a2d5a729-4ed1-3f1b-a5fd-3bd090a48aa5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn301622h",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 7
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -56,
- "errorValue": 5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f1c00d50-7b3c-4380-9611-7796fcb6605a.json b/test/data/enm/study-NWKI-f1c00d50-7b3c-4380-9611-7796fcb6605a.json
deleted file mode 100644
index 3006c58..0000000
--- a/test/data/enm/study-NWKI-f1c00d50-7b3c-4380-9611-7796fcb6605a.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-f1c00d50-7b3c-4380-9611-7796fcb6605a",
- "owner": {
- "substance": {
- "uuid": "NWKI-8ef21404-e101-37c8-8206-32f526d75012"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 100,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f1e1f762-cb0e-4758-8242-9dbeba51898c.json b/test/data/enm/study-NWKI-f1e1f762-cb0e-4758-8242-9dbeba51898c.json
deleted file mode 100644
index be4a017..0000000
--- a/test/data/enm/study-NWKI-f1e1f762-cb0e-4758-8242-9dbeba51898c.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-f1e1f762-cb0e-4758-8242-9dbeba51898c",
- "owner": {
- "substance": {
- "uuid": "NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 0.375,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f2c1af5b-2d28-4124-a88c-53fefaa4fff6.json b/test/data/enm/study-NWKI-f2c1af5b-2d28-4124-a88c-53fefaa4fff6.json
deleted file mode 100644
index 57765d4..0000000
--- a/test/data/enm/study-NWKI-f2c1af5b-2d28-4124-a88c-53fefaa4fff6.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-f2c1af5b-2d28-4124-a88c-53fefaa4fff6",
- "owner": {
- "substance": {
- "uuid": "NWKI-de03994b-9d74-3e39-aa41-e7df34384442"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 50,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f348dc52-e4ed-4222-8b25-8c60b5a9b082.json b/test/data/enm/study-NWKI-f348dc52-e4ed-4222-8b25-8c60b5a9b082.json
deleted file mode 100644
index a5c5ef3..0000000
--- a/test/data/enm/study-NWKI-f348dc52-e4ed-4222-8b25-8c60b5a9b082.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-f348dc52-e4ed-4222-8b25-8c60b5a9b082",
- "owner": {
- "substance": {
- "uuid": "NWKI-f3be029d-68f6-310a-87a4-ceffee1b4eda"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Mean Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 62
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f34bd7ea-23f0-4914-9e8d-fc373f03a50e.json b/test/data/enm/study-NWKI-f34bd7ea-23f0-4914-9e8d-fc373f03a50e.json
deleted file mode 100644
index c8ebcc6..0000000
--- a/test/data/enm/study-NWKI-f34bd7ea-23f0-4914-9e8d-fc373f03a50e.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-f34bd7ea-23f0-4914-9e8d-fc373f03a50e",
- "owner": {
- "substance": {
- "uuid": "NWKI-d1c31022-c044-30fa-931e-07d96b6f04b5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1080/10934520600966177",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 40,
- "upQualifier": "<=",
- "upValue": 47
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f39c022c-a485-442c-8921-f798d46857cc.json b/test/data/enm/study-NWKI-f39c022c-a485-442c-8921-f798d46857cc.json
deleted file mode 100644
index 5c25d6f..0000000
--- a/test/data/enm/study-NWKI-f39c022c-a485-442c-8921-f798d46857cc.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-f39c022c-a485-442c-8921-f798d46857cc",
- "owner": {
- "substance": {
- "uuid": "NWKI-8667bfb7-a5da-3eb0-b9d7-86e2c8f06f19"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 60,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 4
- }
- },
- "result": {
- "unit": null,
- "loValue": 98
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f3f409b5-312e-4c14-bd8b-86983cbb69be.json b/test/data/enm/study-NWKI-f3f409b5-312e-4c14-bd8b-86983cbb69be.json
deleted file mode 100644
index 22c3743..0000000
--- a/test/data/enm/study-NWKI-f3f409b5-312e-4c14-bd8b-86983cbb69be.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-f3f409b5-312e-4c14-bd8b-86983cbb69be",
- "owner": {
- "substance": {
- "uuid": "NWKI-c4c91023-5b41-3d6d-bb4f-ee1152926be0"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 2500,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 45
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f4b25191-fdc0-42ad-a381-8d7a2d240077.json b/test/data/enm/study-NWKI-f4b25191-fdc0-42ad-a381-8d7a2d240077.json
deleted file mode 100644
index 8b0456d..0000000
--- a/test/data/enm/study-NWKI-f4b25191-fdc0-42ad-a381-8d7a2d240077.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-f4b25191-fdc0-42ad-a381-8d7a2d240077",
- "owner": {
- "substance": {
- "uuid": "NWKI-509caa0e-0b8c-30e9-9592-48c6a83fe4ec"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/tx800289z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f574b0be-00ea-4407-b36f-f23425acddc7.json b/test/data/enm/study-NWKI-f574b0be-00ea-4407-b36f-f23425acddc7.json
deleted file mode 100644
index 8bdde3e..0000000
--- a/test/data/enm/study-NWKI-f574b0be-00ea-4407-b36f-f23425acddc7.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-f574b0be-00ea-4407-b36f-f23425acddc7",
- "owner": {
- "substance": {
- "uuid": "NWKI-e6ef5597-a3f9-3f21-afff-db5f654ef534"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.29
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f5b23bcd-efc3-4a65-ab24-d34b0d2c6e92.json b/test/data/enm/study-NWKI-f5b23bcd-efc3-4a65-ab24-d34b0d2c6e92.json
deleted file mode 100644
index 169578c..0000000
--- a/test/data/enm/study-NWKI-f5b23bcd-efc3-4a65-ab24-d34b0d2c6e92.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-f5b23bcd-efc3-4a65-ab24-d34b0d2c6e92",
- "owner": {
- "substance": {
- "uuid": "NWKI-0a6e319e-71fc-37f7-b88d-fbda2e07ccc1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "Cell number determination"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Method type": "Cell number determination"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 100,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "loValue": 98
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f5b27205-883e-4ca5-9b36-dcff899424e7.json b/test/data/enm/study-NWKI-f5b27205-883e-4ca5-9b36-dcff899424e7.json
deleted file mode 100644
index c99a23b..0000000
--- a/test/data/enm/study-NWKI-f5b27205-883e-4ca5-9b36-dcff899424e7.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-f5b27205-883e-4ca5-9b36-dcff899424e7",
- "owner": {
- "substance": {
- "uuid": "NWKI-c10e9034-a37c-37f8-afa4-b0e1081c6856"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 13.5,
- "errorValue": 4.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f5ca7f44-a8bf-4334-b09e-5ef6d04d3dac.json b/test/data/enm/study-NWKI-f5ca7f44-a8bf-4334-b09e-5ef6d04d3dac.json
deleted file mode 100644
index 8cf9b0f..0000000
--- a/test/data/enm/study-NWKI-f5ca7f44-a8bf-4334-b09e-5ef6d04d3dac.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-f5ca7f44-a8bf-4334-b09e-5ef6d04d3dac",
- "owner": {
- "substance": {
- "uuid": "NWKI-395bf212-b710-3385-9c23-715a7055b015"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002167_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002167",
- "title": "BAO_0002167 Genotoxicity Assay"
- },
- "endpoint": "DNA in Tail",
- "guideline": [
- "Fpg-2Dmodified Comet Assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Fpg-2Dmodified Comet Assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "DNA_in_Tail",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- },
- "FPG Content": {
- "loValue": 100
- }
- },
- "result": {
- "unit": "%",
- "loValue": 4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f5e2ff69-a30f-4e11-b174-919b40b307a3.json b/test/data/enm/study-NWKI-f5e2ff69-a30f-4e11-b174-919b40b307a3.json
deleted file mode 100644
index 0a267c6..0000000
--- a/test/data/enm/study-NWKI-f5e2ff69-a30f-4e11-b174-919b40b307a3.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-f5e2ff69-a30f-4e11-b174-919b40b307a3",
- "owner": {
- "substance": {
- "uuid": "NWKI-417f0133-8f2c-3255-bdcf-7d71ac295d00"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 100,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f5f44a99-a481-4795-83f3-f4a111bb155d.json b/test/data/enm/study-NWKI-f5f44a99-a481-4795-83f3-f4a111bb155d.json
deleted file mode 100644
index 05a41c4..0000000
--- a/test/data/enm/study-NWKI-f5f44a99-a481-4795-83f3-f4a111bb155d.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-f5f44a99-a481-4795-83f3-f4a111bb155d",
- "owner": {
- "substance": {
- "uuid": "NWKI-e518c122-5f4f-3611-8b30-56b671883e5c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f618f090-2592-422e-834b-c043e330167f.json b/test/data/enm/study-NWKI-f618f090-2592-422e-834b-c043e330167f.json
deleted file mode 100644
index a62856c..0000000
--- a/test/data/enm/study-NWKI-f618f090-2592-422e-834b-c043e330167f.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-f618f090-2592-422e-834b-c043e330167f",
- "owner": {
- "substance": {
- "uuid": "NWKI-57a03b07-0bb6-306c-ba30-71d5bc626385"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1016/j.soilbio.2013.01.016",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 20,
- "upQualifier": "<=",
- "upValue": 30
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f698f09b-0fe8-49a5-9653-1e19d87e87d4.json b/test/data/enm/study-NWKI-f698f09b-0fe8-49a5-9653-1e19d87e87d4.json
deleted file mode 100644
index 901ba78..0000000
--- a/test/data/enm/study-NWKI-f698f09b-0fe8-49a5-9653-1e19d87e87d4.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-f698f09b-0fe8-49a5-9653-1e19d87e87d4",
- "owner": {
- "substance": {
- "uuid": "NWKI-b110d018-6de0-303b-afcc-6a5e1f5911aa"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Specific Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loValue": 90
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f70949ca-c8fc-4c53-9289-cfb49bbe721b.json b/test/data/enm/study-NWKI-f70949ca-c8fc-4c53-9289-cfb49bbe721b.json
deleted file mode 100644
index 762b411..0000000
--- a/test/data/enm/study-NWKI-f70949ca-c8fc-4c53-9289-cfb49bbe721b.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-f70949ca-c8fc-4c53-9289-cfb49bbe721b",
- "owner": {
- "substance": {
- "uuid": "NWKI-ec00c05f-0b35-3c5a-b16f-7a3560213764"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -9.34
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f72b366c-8a43-46dc-a05b-1a27ef7bf17d.json b/test/data/enm/study-NWKI-f72b366c-8a43-46dc-a05b-1a27ef7bf17d.json
deleted file mode 100644
index 05bf70a..0000000
--- a/test/data/enm/study-NWKI-f72b366c-8a43-46dc-a05b-1a27ef7bf17d.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-f72b366c-8a43-46dc-a05b-1a27ef7bf17d",
- "owner": {
- "substance": {
- "uuid": "NWKI-97103918-5eeb-36a3-9981-3aa6dcef5d4c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 150,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f78a6697-ef20-470a-9472-b92cb085f363.json b/test/data/enm/study-NWKI-f78a6697-ef20-470a-9472-b92cb085f363.json
deleted file mode 100644
index 6ae75b8..0000000
--- a/test/data/enm/study-NWKI-f78a6697-ef20-470a-9472-b92cb085f363.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-f78a6697-ef20-470a-9472-b92cb085f363",
- "owner": {
- "substance": {
- "uuid": "NWKI-8667bfb7-a5da-3eb0-b9d7-86e2c8f06f19"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3762/bjnano.5.151",
- "year": "2014",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Percentage Viable Cells",
- "guideline": [
- "MTT reduction assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "MTT reduction assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Percentage_Viable_Cells",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 600,
- "unit": "µg/mL"
- },
- "Incubation Time": {
- "loValue": 4
- }
- },
- "result": {
- "unit": null,
- "loValue": 95
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f7a33447-5ffe-43d7-a7cd-744d88a99dde.json b/test/data/enm/study-NWKI-f7a33447-5ffe-43d7-a7cd-744d88a99dde.json
deleted file mode 100644
index f956924..0000000
--- a/test/data/enm/study-NWKI-f7a33447-5ffe-43d7-a7cd-744d88a99dde.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-f7a33447-5ffe-43d7-a7cd-744d88a99dde",
- "owner": {
- "substance": {
- "uuid": "NWKI-ea48c37d-840a-30d2-9740-1198a7e2c3b6"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "Surface Area",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- "Remark": null
- },
- "result": {
- "unit": "m^2/g",
- "loQualifier": ">=",
- "loValue": 175,
- "upQualifier": "<=",
- "upValue": 225
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f7b60875-d81f-4dcb-87d0-2eaf6608c658.json b/test/data/enm/study-NWKI-f7b60875-d81f-4dcb-87d0-2eaf6608c658.json
deleted file mode 100644
index 0d8b8ad..0000000
--- a/test/data/enm/study-NWKI-f7b60875-d81f-4dcb-87d0-2eaf6608c658.json
+++ /dev/null
@@ -1,65 +0,0 @@
-{
- "uuid": "NWKI-f7b60875-d81f-4dcb-87d0-2eaf6608c658",
- "owner": {
- "substance": {
- "uuid": "NWKI-916751bb-8457-3844-87c0-ada4c6afd1ab"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/ja309812z",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "Serum": {
- "loValue": "sfMEM"
- },
- "pH": {
- "loValue": 8.11
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f7d03856-5343-4baa-ad7a-c1c3722a2e5a.json b/test/data/enm/study-NWKI-f7d03856-5343-4baa-ad7a-c1c3722a2e5a.json
deleted file mode 100644
index 8b7bb89..0000000
--- a/test/data/enm/study-NWKI-f7d03856-5343-4baa-ad7a-c1c3722a2e5a.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-f7d03856-5343-4baa-ad7a-c1c3722a2e5a",
- "owner": {
- "substance": {
- "uuid": "NWKI-c0927a67-d21d-37e8-932d-fb1607e58aee"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390903276933",
- "year": "2009",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002167_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002167",
- "title": "BAO_0002167 Genotoxicity Assay"
- },
- "endpoint": "DNA in Tail",
- "guideline": [
- "Fpg-2Dmodified Comet Assay"
- ]
- },
- "parameters": {
- "Cell line": "Caco-2 cell",
- "Method type": "Fpg-2Dmodified Comet Assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "DNA_in_Tail",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 20,
- "unit": "ug/cm^2"
- },
- "FPG Content": {
- "loValue": 100
- }
- },
- "result": {
- "unit": "%",
- "loValue": 8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f7eebb4f-c892-4007-a01e-e2bad43b52c4.json b/test/data/enm/study-NWKI-f7eebb4f-c892-4007-a01e-e2bad43b52c4.json
deleted file mode 100644
index 84157a7..0000000
--- a/test/data/enm/study-NWKI-f7eebb4f-c892-4007-a01e-e2bad43b52c4.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-f7eebb4f-c892-4007-a01e-e2bad43b52c4",
- "owner": {
- "substance": {
- "uuid": "NWKI-5172b34a-a6f6-398f-ace6-1d30e6bc9efa"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DNH2"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f7f637bc-76dc-43a5-92ed-d770c4e059dc.json b/test/data/enm/study-NWKI-f7f637bc-76dc-43a5-92ed-d770c4e059dc.json
deleted file mode 100644
index 81c4e34..0000000
--- a/test/data/enm/study-NWKI-f7f637bc-76dc-43a5-92ed-d770c4e059dc.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-f7f637bc-76dc-43a5-92ed-d770c4e059dc",
- "owner": {
- "substance": {
- "uuid": "NWKI-fd891814-04d2-30bc-a0b6-cc3149bf75ec"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es9016975",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": 12
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f803a531-0d74-4334-8b07-4dd5b902f43a.json b/test/data/enm/study-NWKI-f803a531-0d74-4334-8b07-4dd5b902f43a.json
deleted file mode 100644
index 00c1ef4..0000000
--- a/test/data/enm/study-NWKI-f803a531-0d74-4334-8b07-4dd5b902f43a.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-f803a531-0d74-4334-8b07-4dd5b902f43a",
- "owner": {
- "substance": {
- "uuid": "NWKI-d7e38d71-0fcb-3a23-8cbe-aae4ce82b33a"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 3.37,
- "errorValue": 0.57
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f888f18c-4f44-4365-94ba-0bdeb0e73501.json b/test/data/enm/study-NWKI-f888f18c-4f44-4365-94ba-0bdeb0e73501.json
deleted file mode 100644
index 9e53eca..0000000
--- a/test/data/enm/study-NWKI-f888f18c-4f44-4365-94ba-0bdeb0e73501.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-f888f18c-4f44-4365-94ba-0bdeb0e73501",
- "owner": {
- "substance": {
- "uuid": "NWKI-b6c86895-1b73-39ec-8bd2-0106e77a7673"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 27
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f88dbef8-0f07-4a03-8bec-575095c52cab.json b/test/data/enm/study-NWKI-f88dbef8-0f07-4a03-8bec-575095c52cab.json
deleted file mode 100644
index dc499be..0000000
--- a/test/data/enm/study-NWKI-f88dbef8-0f07-4a03-8bec-575095c52cab.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-f88dbef8-0f07-4a03-8bec-575095c52cab",
- "owner": {
- "substance": {
- "uuid": "NWKI-ce7a2667-21e4-3bd2-b1b6-bd8c298e9df4"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn3010087",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 24.6,
- "errorValue": 5.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f96d66db-233b-4b6f-906f-302f75470d03.json b/test/data/enm/study-NWKI-f96d66db-233b-4b6f-906f-302f75470d03.json
deleted file mode 100644
index c527736..0000000
--- a/test/data/enm/study-NWKI-f96d66db-233b-4b6f-906f-302f75470d03.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "NWKI-f96d66db-233b-4b6f-906f-302f75470d03",
- "owner": {
- "substance": {
- "uuid": "NWKI-3fb9be70-8c15-3b78-94e7-5c3c88799818"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-f9da39f2-c4fe-4158-b508-d51ee55e8122.json b/test/data/enm/study-NWKI-f9da39f2-c4fe-4158-b508-d51ee55e8122.json
deleted file mode 100644
index 3fe4f3b..0000000
--- a/test/data/enm/study-NWKI-f9da39f2-c4fe-4158-b508-d51ee55e8122.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-f9da39f2-c4fe-4158-b508-d51ee55e8122",
- "owner": {
- "substance": {
- "uuid": "NWKI-9a0a7a86-fd00-3835-9795-a4da7d9d1544"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe3O4"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe3O4"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "CLIO-2DCY7"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "Cross-2Dlinked_dextran"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Cross-2Dlinked_dextran"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-fa7823ae-a58c-4fe5-82c5-cc4d9d952d9b.json b/test/data/enm/study-NWKI-fa7823ae-a58c-4fe5-82c5-cc4d9d952d9b.json
deleted file mode 100644
index d41cf76..0000000
--- a/test/data/enm/study-NWKI-fa7823ae-a58c-4fe5-82c5-cc4d9d952d9b.json
+++ /dev/null
@@ -1,61 +0,0 @@
-{
- "uuid": "NWKI-fa7823ae-a58c-4fe5-82c5-cc4d9d952d9b",
- "owner": {
- "substance": {
- "uuid": "NWKI-d39efcf3-d871-34c2-ac1c-b48f35bde877"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "mV",
- "loValue": -39,
- "errorValue": 4.98
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-fa9d23f2-583d-433a-8e54-b769125b6eac.json b/test/data/enm/study-NWKI-fa9d23f2-583d-433a-8e54-b769125b6eac.json
deleted file mode 100644
index feefcb0..0000000
--- a/test/data/enm/study-NWKI-fa9d23f2-583d-433a-8e54-b769125b6eac.json
+++ /dev/null
@@ -1,60 +0,0 @@
-{
- "uuid": "NWKI-fa9d23f2-583d-433a-8e54-b769125b6eac",
- "owner": {
- "substance": {
- "uuid": "NWKI-f9f316e8-e8a9-37f9-877f-86519b3af20e"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": null,
- "loValue": -9.46
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-fb0daa9b-a135-4e67-80bb-58735b271757.json b/test/data/enm/study-NWKI-fb0daa9b-a135-4e67-80bb-58735b271757.json
deleted file mode 100644
index b00f597..0000000
--- a/test/data/enm/study-NWKI-fb0daa9b-a135-4e67-80bb-58735b271757.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "NWKI-fb0daa9b-a135-4e67-80bb-58735b271757",
- "owner": {
- "substance": {
- "uuid": "NWKI-6b07ffd5-b573-3889-a64c-ae7cc99ff977"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": -60,
- "upQualifier": "<=",
- "upValue": 45
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-fc270c92-d071-4d31-b421-6639903b6777.json b/test/data/enm/study-NWKI-fc270c92-d071-4d31-b421-6639903b6777.json
deleted file mode 100644
index db27d2c..0000000
--- a/test/data/enm/study-NWKI-fc270c92-d071-4d31-b421-6639903b6777.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-fc270c92-d071-4d31-b421-6639903b6777",
- "owner": {
- "substance": {
- "uuid": "NWKI-e4dab3d9-2699-3a0b-9e9c-f257088142cc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 6.25,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-fc688bd6-96d8-4219-a59a-2b95903bea30.json b/test/data/enm/study-NWKI-fc688bd6-96d8-4219-a59a-2b95903bea30.json
deleted file mode 100644
index 9fa4517..0000000
--- a/test/data/enm/study-NWKI-fc688bd6-96d8-4219-a59a-2b95903bea30.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-fc688bd6-96d8-4219-a59a-2b95903bea30",
- "owner": {
- "substance": {
- "uuid": "NWKI-a28e83ea-54da-3391-9bca-4a8891680403"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Hydrodynamic size",
- "guideline": [
- "DLS"
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "Method type": "DLS",
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 105,
- "errorValue": 26
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-fc6a8459-0f8c-4910-8e68-1628be59ff93.json b/test/data/enm/study-NWKI-fc6a8459-0f8c-4910-8e68-1628be59ff93.json
deleted file mode 100644
index 7a87df1..0000000
--- a/test/data/enm/study-NWKI-fc6a8459-0f8c-4910-8e68-1628be59ff93.json
+++ /dev/null
@@ -1,62 +0,0 @@
-{
- "uuid": "NWKI-fc6a8459-0f8c-4910-8e68-1628be59ff93",
- "owner": {
- "substance": {
- "uuid": "NWKI-cd7cf8fc-ebd1-3b60-827c-aa33e4d5d433"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nl0730155",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": {
- "loValue": 6.5
- }
- },
- "result": {
- "unit": "mV",
- "loValue": -53.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-fc98e120-6aeb-496f-ae14-dafbad45794a.json b/test/data/enm/study-NWKI-fc98e120-6aeb-496f-ae14-dafbad45794a.json
deleted file mode 100644
index 237be1c..0000000
--- a/test/data/enm/study-NWKI-fc98e120-6aeb-496f-ae14-dafbad45794a.json
+++ /dev/null
@@ -1,92 +0,0 @@
-{
- "uuid": "NWKI-fc98e120-6aeb-496f-ae14-dafbad45794a",
- "owner": {
- "substance": {
- "uuid": "NWKI-17c74ed1-b289-3ca1-8477-390a588cb28c"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SURFACE_CHEMISTRY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "4.30 Nanomaterial surface chemistry"
- },
- "endpoint": "Unknown",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": null,
- "DESCRIPTION": null,
- "ELEMENT_OR_GROUP": {
- "loQualifier": " ",
- "loValue": "Fe2O3"
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "CORE"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Fe2O3"
- }
- },
- {
- "endpoint": "ATOMIC COMPOSITION",
- "conditions": {
- "COATING_DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PVA-2DPEG"
- },
- "DESCRIPTION": {
- "loQualifier": " ",
- "loValue": "PEG"
- },
- "ELEMENT_OR_GROUP": {
- "loQualifier": " "
- },
- "Remark": null,
- "TYPE": {
- "loQualifier": " ",
- "loValue": "COATING"
- }
- },
- "result": {
- "unit": null,
- "textValue": "PEG"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-fd6b8b11-9ff1-4d65-be4b-ff9a0f15245f.json b/test/data/enm/study-NWKI-fd6b8b11-9ff1-4d65-be4b-ff9a0f15245f.json
deleted file mode 100644
index 4c104e4..0000000
--- a/test/data/enm/study-NWKI-fd6b8b11-9ff1-4d65-be4b-ff9a0f15245f.json
+++ /dev/null
@@ -1,58 +0,0 @@
-{
- "uuid": "NWKI-fd6b8b11-9ff1-4d65-be4b-ff9a0f15245f",
- "owner": {
- "substance": {
- "uuid": "NWKI-e4dab3d9-2699-3a0b-9e9c-f257088142cc"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1002/smll.201002366",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Toxicity Classifier",
- "guideline": [
- "PI uptake assay"
- ]
- },
- "parameters": {
- "Cell line": "BEAS-2B",
- "Method type": "PI uptake assay"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": "Non-toxic"
- },
- "effects": [
- {
- "endpoint": "Toxicity Classifier",
- "conditions": {
- "Doses/concentrations": {
- "loValue": 0.375,
- "unit": "mg/L"
- }
- },
- "result": {
- "unit": null,
- "textValue": "Non-toxic"
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-fda09e56-a29d-43ed-9863-8c0f8cbe0261.json b/test/data/enm/study-NWKI-fda09e56-a29d-43ed-9863-8c0f8cbe0261.json
deleted file mode 100644
index bcf6dda..0000000
--- a/test/data/enm/study-NWKI-fda09e56-a29d-43ed-9863-8c0f8cbe0261.json
+++ /dev/null
@@ -1,52 +0,0 @@
-{
- "uuid": "NWKI-fda09e56-a29d-43ed-9863-8c0f8cbe0261",
- "owner": {
- "substance": {
- "uuid": "NWKI-e93603a1-8e0d-372a-8acf-48533b86ecb5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/es051043o",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "UNKNOWN_TOXICITY_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0000015",
- "title": "7.99 Toxicity (other)"
- },
- "endpoint": "Concentration in culture medium",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Concentration_in_culture_medium",
- "conditions": {
- },
- "result": {
- "unit": "ug/g",
- "loValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ff0b4348-41cb-40e4-8d13-f8d63fd01973.json b/test/data/enm/study-NWKI-ff0b4348-41cb-40e4-8d13-f8d63fd01973.json
deleted file mode 100644
index b35f333..0000000
--- a/test/data/enm/study-NWKI-ff0b4348-41cb-40e4-8d13-f8d63fd01973.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-ff0b4348-41cb-40e4-8d13-f8d63fd01973",
- "owner": {
- "substance": {
- "uuid": "NWKI-80f9ab46-f8fe-36de-9335-17c9d1dbdba5"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.3109/17435390.2015.1017022",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Diameter",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Diameter",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "μm",
- "loValue": 1.1,
- "errorValue": 0.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ff65f97b-b115-4b5e-982e-66757a1be5ef.json b/test/data/enm/study-NWKI-ff65f97b-b115-4b5e-982e-66757a1be5ef.json
deleted file mode 100644
index 228b6d6..0000000
--- a/test/data/enm/study-NWKI-ff65f97b-b115-4b5e-982e-66757a1be5ef.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "NWKI-ff65f97b-b115-4b5e-982e-66757a1be5ef",
- "owner": {
- "substance": {
- "uuid": "NWKI-3e42f6e5-635a-3f1e-a51a-39ce26751ec9"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1038/nnano.2011.10",
- "year": "2011",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "Log Reciprocal EC50",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "Cell line": "Escherichia coli cells"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "Log_Reciprocal_EC50",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.82
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ff7e7c54-4e86-462d-b849-1ca11d72beb9.json b/test/data/enm/study-NWKI-ff7e7c54-4e86-462d-b849-1ca11d72beb9.json
deleted file mode 100644
index 28f4ea2..0000000
--- a/test/data/enm/study-NWKI-ff7e7c54-4e86-462d-b849-1ca11d72beb9.json
+++ /dev/null
@@ -1,59 +0,0 @@
-{
- "uuid": "NWKI-ff7e7c54-4e86-462d-b849-1ca11d72beb9",
- "owner": {
- "substance": {
- "uuid": "NWKI-c8d9772c-e50e-3c71-986c-e45692150d71"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1073/pnas.0802878105",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Primary Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": 20,
- "upQualifier": "<=",
- "upValue": 60
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ff824497-26e7-4518-af8a-3db0dbd9caf7.json b/test/data/enm/study-NWKI-ff824497-26e7-4518-af8a-3db0dbd9caf7.json
deleted file mode 100644
index d08fbb4..0000000
--- a/test/data/enm/study-NWKI-ff824497-26e7-4518-af8a-3db0dbd9caf7.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "NWKI-ff824497-26e7-4518-af8a-3db0dbd9caf7",
- "owner": {
- "substance": {
- "uuid": "NWKI-21dbebfb-695f-3ff4-b7a4-bead2b52cf13"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": null,
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "Zeta Potential",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DATA_GATHERING_INSTRUMENTS": null,
- "Method details": null,
- "SAMPLING": null,
- "TESTMAT_FORM": null,
- "Type of method": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- "MEDIUM": null,
- "Remark": null,
- "pH": null
- },
- "result": {
- "unit": "nm",
- "loQualifier": ">=",
- "loValue": -45,
- "upQualifier": "<=",
- "upValue": 55
- }
- }
- ]
-}
diff --git a/test/data/enm/study-NWKI-ff8b50e6-08e4-4741-a71a-e37ccd013707.json b/test/data/enm/study-NWKI-ff8b50e6-08e4-4741-a71a-e37ccd013707.json
deleted file mode 100644
index fce9b5a..0000000
--- a/test/data/enm/study-NWKI-ff8b50e6-08e4-4741-a71a-e37ccd013707.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "NWKI-ff8b50e6-08e4-4741-a71a-e37ccd013707",
- "owner": {
- "substance": {
- "uuid": "NWKI-e7bdb2a3-0b3f-3a38-8d6b-1babc6d92da1"
- },
- "company": {
- "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da",
- "name": "NanoWiki"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1021/nn2021056",
- "year": "0",
- "owner": "NanoWiki"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "Particle Size",
- "guideline": [
- ""
- ]
- },
- "parameters": {
- "DISTRIBUTION_TYPE": null,
- "TESTMAT_FORM": null
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PARTICLE SIZE",
- "conditions": {
- "Remark": null,
- "SEQ_NUM": null
- },
- "result": {
- "unit": "nm",
- "loValue": 15.5,
- "errorValue": 4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-001d8891-b389-444b-83a7-c3432b81624c.json b/test/data/enm/study-XLSX-001d8891-b389-444b-83a7-c3432b81624c.json
deleted file mode 100644
index 91d5d08..0000000
--- a/test/data/enm/study-XLSX-001d8891-b389-444b-83a7-c3432b81624c.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-001d8891-b389-444b-83a7-c3432b81624c",
- "owner": {
- "substance": {
- "uuid": "XLSX-295d65e6-0d6e-3987-a67f-e4482fa28c71"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "099",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "099",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "round"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-00f20ed0-d6be-485d-be1f-0fd5cfea6f45.json b/test/data/enm/study-XLSX-00f20ed0-d6be-485d-be1f-0fd5cfea6f45.json
deleted file mode 100644
index 14ea531..0000000
--- a/test/data/enm/study-XLSX-00f20ed0-d6be-485d-be1f-0fd5cfea6f45.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-00f20ed0-d6be-485d-be1f-0fd5cfea6f45",
- "owner": {
- "substance": {
- "uuid": "XLSX-38666e26-8f8e-37a4-b97c-728a1e5aa0f2"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "038",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "038",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "(m2/g)",
- "loValue": 226.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-012fa9ed-275d-43bf-996d-20ee50308991.json b/test/data/enm/study-XLSX-012fa9ed-275d-43bf-996d-20ee50308991.json
deleted file mode 100644
index c65c5aa..0000000
--- a/test/data/enm/study-XLSX-012fa9ed-275d-43bf-996d-20ee50308991.json
+++ /dev/null
@@ -1,1016 +0,0 @@
-{
- "uuid": "XLSX-012fa9ed-275d-43bf-996d-20ee50308991",
- "owner": {
- "substance": {
- "uuid": "XLSX-aacdfad8-f3d3-39f2-b662-0d8084e283ef"
- },
- "company": {
- "uuid": "XLSX-4bb81f08-059d-32ad-b5fd-71c6bcc6e0db",
- "name": "FP7 MARINA"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1371/journal.pone.0127174",
- "year": "2015",
- "owner": "P32 - KI"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "Cell viability - cell membrane damage: Lactate dehydrogenase assay (LDH) (CytoTox 96® Non-radioactive cytotoxicity assay - Promega, G1780) ",
- "guideline": [
- "Cytotoxicity using human monocyte-derived macrophages (HMDM)"
- ]
- },
- "parameters": {
- "CHMO:0002774": "N",
- "CLO_0000031": "HMDM",
- "CLO_0000031 EFO_0004443": "Karolinska University Hospital, Stockholm, Sweden - buffy coats from healthy adult blood donors ",
- "Cell culture conditions - Serum": "FBS (Gibco, 10500) ",
- "Cell culture conditions - Serum concentration in growth medium": 0.1,
- "Cell culture conditions - Serum concentration in treatment medium": "0,05%",
- "Cell line/Type - Full name": "Primary human monocyte-derived macrophages (HMDM)",
- "Dispersion agent": "water with 0,05% BSA",
- "NPO_1952": "Y",
- "NPO_1961": "Y",
- "NPO_1969 OBI_0000272": "NANOGENOTOX Dispersion protocol (http://www.nanogenotox.eu/files/PDF/web%20nanogenotox%20dispersion%20protocol.pdf) ",
- "OBI_0001911 BAO_0000114": "RPMI (Sigma, R0833)"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 97.542
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 96.65
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 94.321
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 82.461
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 68.18
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 58.725
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 39.835
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 98.295
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 97.724
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 93.735
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 83.795
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 64.729
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 53.187
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 43.117
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 99.92
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 91.437
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 82.094
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 56.049
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 25.874
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 23.828
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 28.389
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 88.264
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 83.09
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 79.01
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 61.029
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 49.667
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 44.124
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 28.98
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 91.224
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 77.783
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 75.223
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 56.581
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 35.798
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 34.625
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 25.894
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 148.209
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 121.997
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 112.79
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 97.73
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 92.256
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 86.975
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 54.098
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-018037bc-bef4-426c-a094-92b32a18582f.json b/test/data/enm/study-XLSX-018037bc-bef4-426c-a094-92b32a18582f.json
deleted file mode 100644
index dc51167..0000000
--- a/test/data/enm/study-XLSX-018037bc-bef4-426c-a094-92b32a18582f.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "XLSX-018037bc-bef4-426c-a094-92b32a18582f",
- "owner": {
- "substance": {
- "uuid": "XLSX-95020ff3-17ee-3889-8a9f-f2555dc4a930"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "001",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "001",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-02dec166-417c-4bc9-8a9b-c5f7c2890b63.json b/test/data/enm/study-XLSX-02dec166-417c-4bc9-8a9b-c5f7c2890b63.json
deleted file mode 100644
index e917391..0000000
--- a/test/data/enm/study-XLSX-02dec166-417c-4bc9-8a9b-c5f7c2890b63.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-02dec166-417c-4bc9-8a9b-c5f7c2890b63",
- "owner": {
- "substance": {
- "uuid": "XLSX-f94651ce-fd32-3306-8f89-32ffdf533be9"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "160",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1911_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1911",
- "title": "NPO_1911 MTT Assay"
- },
- "endpoint": "160",
- "guideline": [
- "MTT"
- ]
- },
- "parameters": {
- "Cell line": "SH-SY5Y",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 137.227
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 487.559
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 14.013
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-0429b441-611d-45f6-b8aa-e50ba7e8f82d.json b/test/data/enm/study-XLSX-0429b441-611d-45f6-b8aa-e50ba7e8f82d.json
deleted file mode 100644
index 699a00a..0000000
--- a/test/data/enm/study-XLSX-0429b441-611d-45f6-b8aa-e50ba7e8f82d.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-0429b441-611d-45f6-b8aa-e50ba7e8f82d",
- "owner": {
- "substance": {
- "uuid": "XLSX-38666e26-8f8e-37a4-b97c-728a1e5aa0f2"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "036",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "036",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 553.678
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4688.068
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 165.376
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-058e0bdc-84d9-467f-9b76-8b99e982fd01.json b/test/data/enm/study-XLSX-058e0bdc-84d9-467f-9b76-8b99e982fd01.json
deleted file mode 100644
index c6e7ad8..0000000
--- a/test/data/enm/study-XLSX-058e0bdc-84d9-467f-9b76-8b99e982fd01.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-058e0bdc-84d9-467f-9b76-8b99e982fd01",
- "owner": {
- "substance": {
- "uuid": "XLSX-498d791a-4c0f-3eab-bb2b-bd554637d9af"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "135",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "135",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 322
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-05e344f8-3e92-4433-b1df-25613c1b2284.json b/test/data/enm/study-XLSX-05e344f8-3e92-4433-b1df-25613c1b2284.json
deleted file mode 100644
index 25638f2..0000000
--- a/test/data/enm/study-XLSX-05e344f8-3e92-4433-b1df-25613c1b2284.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-05e344f8-3e92-4433-b1df-25613c1b2284",
- "owner": {
- "substance": {
- "uuid": "XLSX-0bfa2e41-c6b6-3cbf-8a1e-73bf006768ab"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "024",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "024",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 160.756
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 250.049
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 3.572
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-075a1a1e-f09b-463e-ace6-453b2109941a.json b/test/data/enm/study-XLSX-075a1a1e-f09b-463e-ace6-453b2109941a.json
deleted file mode 100644
index bbd360a..0000000
--- a/test/data/enm/study-XLSX-075a1a1e-f09b-463e-ace6-453b2109941a.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-075a1a1e-f09b-463e-ace6-453b2109941a",
- "owner": {
- "substance": {
- "uuid": "XLSX-acb82e6d-63d6-3cf4-a796-a281b1ba835f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "012",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "012",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 81.573
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 185.668
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4.164
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-0768a016-0b68-4992-a896-ce2a9dadca36.json b/test/data/enm/study-XLSX-0768a016-0b68-4992-a896-ce2a9dadca36.json
deleted file mode 100644
index 72d091b..0000000
--- a/test/data/enm/study-XLSX-0768a016-0b68-4992-a896-ce2a9dadca36.json
+++ /dev/null
@@ -1,1016 +0,0 @@
-{
- "uuid": "XLSX-0768a016-0b68-4992-a896-ce2a9dadca36",
- "owner": {
- "substance": {
- "uuid": "XLSX-b4e4a8e9-6d27-3218-a243-7aa30560adb1"
- },
- "company": {
- "uuid": "XLSX-4bb81f08-059d-32ad-b5fd-71c6bcc6e0db",
- "name": "FP7 MARINA"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1371/journal.pone.0127174",
- "year": "2015",
- "owner": "P32 - KI"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "Cell viability - cell membrane damage: Lactate dehydrogenase assay (LDH) (CytoTox 96® Non-radioactive cytotoxicity assay - Promega, G1780) ",
- "guideline": [
- "Cytotoxicity using human monocyte-derived macrophages (HMDM)"
- ]
- },
- "parameters": {
- "CHMO:0002774": "N",
- "CLO_0000031": "HMDM",
- "CLO_0000031 EFO_0004443": "Karolinska University Hospital, Stockholm, Sweden - buffy coats from healthy adult blood donors ",
- "Cell culture conditions - Serum": "FBS (Gibco, 10500) ",
- "Cell culture conditions - Serum concentration in growth medium": 0.1,
- "Cell culture conditions - Serum concentration in treatment medium": "0,05%",
- "Cell line/Type - Full name": "Primary human monocyte-derived macrophages (HMDM)",
- "Dispersion agent": "water with 0,05% BSA",
- "NPO_1952": "Y",
- "NPO_1961": "Y",
- "NPO_1969 OBI_0000272": "NANOGENOTOX Dispersion protocol (http://www.nanogenotox.eu/files/PDF/web%20nanogenotox%20dispersion%20protocol.pdf) ",
- "OBI_0001911 BAO_0000114": "RPMI (Sigma, R0833)"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 96.376
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 95.98
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 96.507
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 94.882
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 97.985
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 96.109
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 77.37
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 103.739
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 102.574
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 102.473
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 102.827
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 102.473
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100.108
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 91.666
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100.371
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 102.324
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100.424
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 96.868
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 79.298
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 83.237
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 78.43
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 93.007
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 86.814
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 73.76
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 67.005
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 68.435
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 66.78
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 52.622
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100.652
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 97.48
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 85.023
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 74.673
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 71.709
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 72.678
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 61.105
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 118.083
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 121.026
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 139.29
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 53.388
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 53.162
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 75.72
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 43.694
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-07ccb8b4-5cc7-4b87-8627-c6e3c1833de3.json b/test/data/enm/study-XLSX-07ccb8b4-5cc7-4b87-8627-c6e3c1833de3.json
deleted file mode 100644
index 27b8e56..0000000
--- a/test/data/enm/study-XLSX-07ccb8b4-5cc7-4b87-8627-c6e3c1833de3.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-07ccb8b4-5cc7-4b87-8627-c6e3c1833de3",
- "owner": {
- "substance": {
- "uuid": "XLSX-3ff81e94-3d5d-3e58-a761-b0bd7c94de3b"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "107",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "107",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 87
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-0833c070-e1d1-42cf-90da-eda8083970fa.json b/test/data/enm/study-XLSX-0833c070-e1d1-42cf-90da-eda8083970fa.json
deleted file mode 100644
index f80c90b..0000000
--- a/test/data/enm/study-XLSX-0833c070-e1d1-42cf-90da-eda8083970fa.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "XLSX-0833c070-e1d1-42cf-90da-eda8083970fa",
- "owner": {
- "substance": {
- "uuid": "XLSX-f94651ce-fd32-3306-8f89-32ffdf533be9"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "160",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "160",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loQualifier": ">=",
- "loValue": 45,
- "upQualifier": "<=",
- "upValue": 55
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-093abfa8-d084-45dc-9d3f-c2b754cebd5a.json b/test/data/enm/study-XLSX-093abfa8-d084-45dc-9d3f-c2b754cebd5a.json
deleted file mode 100644
index b897513..0000000
--- a/test/data/enm/study-XLSX-093abfa8-d084-45dc-9d3f-c2b754cebd5a.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-093abfa8-d084-45dc-9d3f-c2b754cebd5a",
- "owner": {
- "substance": {
- "uuid": "XLSX-a1b25bf2-6046-3c16-ba1c-3efb11b5a4d6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "156",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "156",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NCI-H292",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 3375.734
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4444.517
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 42.751
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-09b11309-62b3-458c-8178-941b9367bc9a.json b/test/data/enm/study-XLSX-09b11309-62b3-458c-8178-941b9367bc9a.json
deleted file mode 100644
index 72d43b2..0000000
--- a/test/data/enm/study-XLSX-09b11309-62b3-458c-8178-941b9367bc9a.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-09b11309-62b3-458c-8178-941b9367bc9a",
- "owner": {
- "substance": {
- "uuid": "XLSX-7394378e-b717-3418-a3f7-27db3cbbd8d0"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "035",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "035",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2.081
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 18.153
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.643
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-0b932d4a-0c45-4c31-8566-4d10d5b941cd.json b/test/data/enm/study-XLSX-0b932d4a-0c45-4c31-8566-4d10d5b941cd.json
deleted file mode 100644
index 21521c6..0000000
--- a/test/data/enm/study-XLSX-0b932d4a-0c45-4c31-8566-4d10d5b941cd.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-0b932d4a-0c45-4c31-8566-4d10d5b941cd",
- "owner": {
- "substance": {
- "uuid": "XLSX-7677801c-4895-3ffd-807a-832c589341df"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "151",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "151",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": 40
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-0cb8d5dc-04c5-4219-9810-395fde33e6fe.json b/test/data/enm/study-XLSX-0cb8d5dc-04c5-4219-9810-395fde33e6fe.json
deleted file mode 100644
index a0b2a93..0000000
--- a/test/data/enm/study-XLSX-0cb8d5dc-04c5-4219-9810-395fde33e6fe.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-0cb8d5dc-04c5-4219-9810-395fde33e6fe",
- "owner": {
- "substance": {
- "uuid": "XLSX-bbff7bfc-273b-3dfb-be71-5afb33113e53"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "022",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "022",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 48.179
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 142.862
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 3.787
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-0cde3527-03c7-4dcd-96d8-3ce8ca1a0ddf.json b/test/data/enm/study-XLSX-0cde3527-03c7-4dcd-96d8-3ce8ca1a0ddf.json
deleted file mode 100644
index 26d9cd0..0000000
--- a/test/data/enm/study-XLSX-0cde3527-03c7-4dcd-96d8-3ce8ca1a0ddf.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-0cde3527-03c7-4dcd-96d8-3ce8ca1a0ddf",
- "owner": {
- "substance": {
- "uuid": "XLSX-a0d9ab63-ee03-3224-984a-4bd276e3ea3a"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "143",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1911_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1911",
- "title": "NPO_1911 MTT Assay"
- },
- "endpoint": "143",
- "guideline": [
- "MTT"
- ]
- },
- "parameters": {
- "Cell line": "NIH/3T3",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 144,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.097
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4.02
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.117
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-0f1baa67-be27-4500-82f5-f5d695119ec0.json b/test/data/enm/study-XLSX-0f1baa67-be27-4500-82f5-f5d695119ec0.json
deleted file mode 100644
index e8588e3..0000000
--- a/test/data/enm/study-XLSX-0f1baa67-be27-4500-82f5-f5d695119ec0.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-0f1baa67-be27-4500-82f5-f5d695119ec0",
- "owner": {
- "substance": {
- "uuid": "XLSX-7e2b0550-595b-3427-b6f3-b84211a5c402"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "019",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "019",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NCI-H292",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 18.982
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 36.171
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.688
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-0f27cd90-05cb-4d6c-8d38-e09acd7f2ebd.json b/test/data/enm/study-XLSX-0f27cd90-05cb-4d6c-8d38-e09acd7f2ebd.json
deleted file mode 100644
index b7970a6..0000000
--- a/test/data/enm/study-XLSX-0f27cd90-05cb-4d6c-8d38-e09acd7f2ebd.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-0f27cd90-05cb-4d6c-8d38-e09acd7f2ebd",
- "owner": {
- "substance": {
- "uuid": "XLSX-a44564c5-1458-3e3b-aca7-d63f5221d2a8"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "183",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "183",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "Mainly 2 euhedral morphologies: aspect ratio of 1 (20–250 nm and 400 nm) and 2:7,5 (50-350 nm)"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.68
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-0f82a6fb-2e01-4096-a414-6d17e18ffad5.json b/test/data/enm/study-XLSX-0f82a6fb-2e01-4096-a414-6d17e18ffad5.json
deleted file mode 100644
index 34a2590..0000000
--- a/test/data/enm/study-XLSX-0f82a6fb-2e01-4096-a414-6d17e18ffad5.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-0f82a6fb-2e01-4096-a414-6d17e18ffad5",
- "owner": {
- "substance": {
- "uuid": "XLSX-0d71a921-0e8d-3f25-8deb-20478b7e884b"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "124",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "124",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Stirring",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 90.903
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 145.402
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2.18
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-0f8786fb-d044-4b31-941f-a408fbdc4c2e.json b/test/data/enm/study-XLSX-0f8786fb-d044-4b31-941f-a408fbdc4c2e.json
deleted file mode 100644
index 0cc4a9d..0000000
--- a/test/data/enm/study-XLSX-0f8786fb-d044-4b31-941f-a408fbdc4c2e.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-0f8786fb-d044-4b31-941f-a408fbdc4c2e",
- "owner": {
- "substance": {
- "uuid": "XLSX-75ca4d9f-546f-3d7d-a24e-d0d54809cbb3"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "039",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "039",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NCI-H292",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 270.989
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4684.556
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 176.543
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-0fd4da11-35df-4405-b3b6-c3bf292c198e.json b/test/data/enm/study-XLSX-0fd4da11-35df-4405-b3b6-c3bf292c198e.json
deleted file mode 100644
index 273ea7a..0000000
--- a/test/data/enm/study-XLSX-0fd4da11-35df-4405-b3b6-c3bf292c198e.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-0fd4da11-35df-4405-b3b6-c3bf292c198e",
- "owner": {
- "substance": {
- "uuid": "XLSX-53ac37fa-9e10-3f71-9d74-bc47f28880ff"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "185",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "185",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "16HBE",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.05
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 211.139
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 350.807
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 5.587
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-1005b3f5-639d-48e8-8f4e-962006996f96.json b/test/data/enm/study-XLSX-1005b3f5-639d-48e8-8f4e-962006996f96.json
deleted file mode 100644
index 61096e2..0000000
--- a/test/data/enm/study-XLSX-1005b3f5-639d-48e8-8f4e-962006996f96.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-1005b3f5-639d-48e8-8f4e-962006996f96",
- "owner": {
- "substance": {
- "uuid": "XLSX-7677801c-4895-3ffd-807a-832c589341df"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "151",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "151",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "elongated and rounded"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-10528600-01ff-4fcb-8ffd-eb1c14622464.json b/test/data/enm/study-XLSX-10528600-01ff-4fcb-8ffd-eb1c14622464.json
deleted file mode 100644
index cb08c2f..0000000
--- a/test/data/enm/study-XLSX-10528600-01ff-4fcb-8ffd-eb1c14622464.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-10528600-01ff-4fcb-8ffd-eb1c14622464",
- "owner": {
- "substance": {
- "uuid": "XLSX-a0d9ab63-ee03-3224-984a-4bd276e3ea3a"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "143",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "143",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": 40
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-11423ba7-45fe-47f7-aa2f-1021853503a8.json b/test/data/enm/study-XLSX-11423ba7-45fe-47f7-aa2f-1021853503a8.json
deleted file mode 100644
index 46394d0..0000000
--- a/test/data/enm/study-XLSX-11423ba7-45fe-47f7-aa2f-1021853503a8.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-11423ba7-45fe-47f7-aa2f-1021853503a8",
- "owner": {
- "substance": {
- "uuid": "XLSX-acb82e6d-63d6-3cf4-a796-a281b1ba835f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "012",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "012",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Bath"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 44.8
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 44.8
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 500
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-115502dc-3a59-4d3c-b0e6-14ae7f7dd05e.json b/test/data/enm/study-XLSX-115502dc-3a59-4d3c-b0e6-14ae7f7dd05e.json
deleted file mode 100644
index 69cb005..0000000
--- a/test/data/enm/study-XLSX-115502dc-3a59-4d3c-b0e6-14ae7f7dd05e.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "XLSX-115502dc-3a59-4d3c-b0e6-14ae7f7dd05e",
- "owner": {
- "substance": {
- "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "075",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "075",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Bath"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 25.08
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 25.08
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-116c7102-9677-4acb-9923-e13a326e0848.json b/test/data/enm/study-XLSX-116c7102-9677-4acb-9923-e13a326e0848.json
deleted file mode 100644
index 9b91965..0000000
--- a/test/data/enm/study-XLSX-116c7102-9677-4acb-9923-e13a326e0848.json
+++ /dev/null
@@ -1,696 +0,0 @@
-{
- "uuid": "XLSX-116c7102-9677-4acb-9923-e13a326e0848",
- "owner": {
- "substance": {
- "uuid": "XLSX-b4e4a8e9-6d27-3218-a243-7aa30560adb1"
- },
- "company": {
- "uuid": "XLSX-4bb81f08-059d-32ad-b5fd-71c6bcc6e0db",
- "name": "FP7 MARINA"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1371/journal.pone.0127174",
- "year": "2015",
- "owner": "P32 - KI"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002993_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002993",
- "title": "BAO_0002993 Cytotoxicity Assay"
- },
- "endpoint": "",
- "guideline": [
- "ELISA / TNF-α release in culture medium"
- ]
- },
- "parameters": {
- "CHMO:0002774": "Y",
- "CLO_0000031": "HMDM (primary cells)",
- "CLO_0000031 EFO_0004443": "ATCC",
- "Cell culture conditions - Serum": "FBS (Gibco/413105K) ",
- "Cell culture conditions - Serum concentration in growth medium": 0.1,
- "Cell culture conditions - Serum concentration in treatment medium": 0.1,
- "Cell line/Type - Full name": "human monocyte-derived macrophages (HMDM)",
- "Dispersion agent": "water with 0,05% BSA",
- "NPO_1952": "N",
- "NPO_1961": "N",
- "NPO_1969 OBI_0000272": "NANOGENOTOX Dispersion protocol (http://www.nanogenotox.eu/files/PDF/web%20nanogenotox%20dispersion%20protocol.pdf) ",
- "OBI_0001911 BAO_0000114": "RPMI (Sigma, RNBB2729 "
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 19.209
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 51.34
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 54.146
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 54.248
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 51.382
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 40.765
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 21.658
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 8.806
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 17.204
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 25.185
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 38.635
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 53.932
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 58.479
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 49.172
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 28.59
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 11.051
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 4.515
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 5.748
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 17.559
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 63.942
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 13.506
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 7.371
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 5.037
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 4.846
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 16.168
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 25.371
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 42.205
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 87.953
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 37.918
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 14.972
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 9.695
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 8.52
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-11ef2efa-2bf7-48b3-8c89-e3b993f25ff8.json b/test/data/enm/study-XLSX-11ef2efa-2bf7-48b3-8c89-e3b993f25ff8.json
deleted file mode 100644
index ae16a01..0000000
--- a/test/data/enm/study-XLSX-11ef2efa-2bf7-48b3-8c89-e3b993f25ff8.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-11ef2efa-2bf7-48b3-8c89-e3b993f25ff8",
- "owner": {
- "substance": {
- "uuid": "XLSX-56c58705-05c6-304f-bb42-a3a328e06319"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "182",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "182",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "Mainly 2 euhedral morphologies: aspect ratio of 1 (20–250 nm and 400 nm) and 2:7,5 (50-350 nm)"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.68
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-124615d0-026f-447e-989d-130ae65fc29a.json b/test/data/enm/study-XLSX-124615d0-026f-447e-989d-130ae65fc29a.json
deleted file mode 100644
index f872a35..0000000
--- a/test/data/enm/study-XLSX-124615d0-026f-447e-989d-130ae65fc29a.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "XLSX-124615d0-026f-447e-989d-130ae65fc29a",
- "owner": {
- "substance": {
- "uuid": "XLSX-7d5a7a1b-5069-3256-b796-2361afcf3bfe"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "032",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "032",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Vortexing"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 11
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 846
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-1510c9ea-dae8-44cd-a1f6-d15ce9cfb6aa.json b/test/data/enm/study-XLSX-1510c9ea-dae8-44cd-a1f6-d15ce9cfb6aa.json
deleted file mode 100644
index b9a0217..0000000
--- a/test/data/enm/study-XLSX-1510c9ea-dae8-44cd-a1f6-d15ce9cfb6aa.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-1510c9ea-dae8-44cd-a1f6-d15ce9cfb6aa",
- "owner": {
- "substance": {
- "uuid": "XLSX-190fb54d-9b65-3d58-b65e-b3aae9a1f182"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "154",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "154",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Vortexing"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 10
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 10
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 1338
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-151a3b5f-21cc-4eae-a99e-5a3776271a9f.json b/test/data/enm/study-XLSX-151a3b5f-21cc-4eae-a99e-5a3776271a9f.json
deleted file mode 100644
index a2fe805..0000000
--- a/test/data/enm/study-XLSX-151a3b5f-21cc-4eae-a99e-5a3776271a9f.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-151a3b5f-21cc-4eae-a99e-5a3776271a9f",
- "owner": {
- "substance": {
- "uuid": "XLSX-ade46bc8-d87f-3f9b-afd0-11ca32e5caeb"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "178",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "178",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Bath"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 101
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 170
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 180
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-15394a5e-dc9c-4109-a703-48bfece9354e.json b/test/data/enm/study-XLSX-15394a5e-dc9c-4109-a703-48bfece9354e.json
deleted file mode 100644
index 5458577..0000000
--- a/test/data/enm/study-XLSX-15394a5e-dc9c-4109-a703-48bfece9354e.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-15394a5e-dc9c-4109-a703-48bfece9354e",
- "owner": {
- "substance": {
- "uuid": "XLSX-00cd0ac9-9adc-38a5-9520-89ddd591f75f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "192",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "192",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": -7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-15ffea9f-f9f9-4601-bf6a-4176fd20c40d.json b/test/data/enm/study-XLSX-15ffea9f-f9f9-4601-bf6a-4176fd20c40d.json
deleted file mode 100644
index c04669a..0000000
--- a/test/data/enm/study-XLSX-15ffea9f-f9f9-4601-bf6a-4176fd20c40d.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-15ffea9f-f9f9-4601-bf6a-4176fd20c40d",
- "owner": {
- "substance": {
- "uuid": "XLSX-d4f2714a-a7f6-305a-af41-18d8129fef13"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "184",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "184",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2/g",
- "loValue": 77.992
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-166efb6a-eae4-481e-810b-57e1a6712b78.json b/test/data/enm/study-XLSX-166efb6a-eae4-481e-810b-57e1a6712b78.json
deleted file mode 100644
index b296bf5..0000000
--- a/test/data/enm/study-XLSX-166efb6a-eae4-481e-810b-57e1a6712b78.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-166efb6a-eae4-481e-810b-57e1a6712b78",
- "owner": {
- "substance": {
- "uuid": "XLSX-d3a9ce39-6c15-3e4b-a5ce-5ea23e45ff16"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "111",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "111",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NRK-52E",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 101.589
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 111.998
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.416
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-16b44d12-07d4-4c81-97f8-e5068e683d8a.json b/test/data/enm/study-XLSX-16b44d12-07d4-4c81-97f8-e5068e683d8a.json
deleted file mode 100644
index 3bb068e..0000000
--- a/test/data/enm/study-XLSX-16b44d12-07d4-4c81-97f8-e5068e683d8a.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-16b44d12-07d4-4c81-97f8-e5068e683d8a",
- "owner": {
- "substance": {
- "uuid": "XLSX-ad0a7571-a887-3611-a508-f32ad71f20be"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "079",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "079",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "U-87 MG",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.732
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4.308
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.103
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-178be221-af2d-46a4-a9c4-6cd303bf0f89.json b/test/data/enm/study-XLSX-178be221-af2d-46a4-a9c4-6cd303bf0f89.json
deleted file mode 100644
index d9e68b3..0000000
--- a/test/data/enm/study-XLSX-178be221-af2d-46a4-a9c4-6cd303bf0f89.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-178be221-af2d-46a4-a9c4-6cd303bf0f89",
- "owner": {
- "substance": {
- "uuid": "XLSX-2acfa382-5109-3e49-9fd4-ef8d139be4b2"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "101",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "101",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "16HBE",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 80.042
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 144.629
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2.583
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-17b4b278-d0e5-4244-bec4-5bd49c1c5b2e.json b/test/data/enm/study-XLSX-17b4b278-d0e5-4244-bec4-5bd49c1c5b2e.json
deleted file mode 100644
index a5577e6..0000000
--- a/test/data/enm/study-XLSX-17b4b278-d0e5-4244-bec4-5bd49c1c5b2e.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-17b4b278-d0e5-4244-bec4-5bd49c1c5b2e",
- "owner": {
- "substance": {
- "uuid": "XLSX-0bfa2e41-c6b6-3cbf-8a1e-73bf006768ab"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "023",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "023",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 494.201
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1090.024
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 23.833
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-1828e284-b60f-4786-b26d-d581c7856f1e.json b/test/data/enm/study-XLSX-1828e284-b60f-4786-b26d-d581c7856f1e.json
deleted file mode 100644
index 8425571..0000000
--- a/test/data/enm/study-XLSX-1828e284-b60f-4786-b26d-d581c7856f1e.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-1828e284-b60f-4786-b26d-d581c7856f1e",
- "owner": {
- "substance": {
- "uuid": "XLSX-0bfa2e41-c6b6-3cbf-8a1e-73bf006768ab"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "025",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "025",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1654.555
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2178.131
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 20.943
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-18ffa080-b48e-461b-960c-e23577e9011d.json b/test/data/enm/study-XLSX-18ffa080-b48e-461b-960c-e23577e9011d.json
deleted file mode 100644
index fc20d3b..0000000
--- a/test/data/enm/study-XLSX-18ffa080-b48e-461b-960c-e23577e9011d.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-18ffa080-b48e-461b-960c-e23577e9011d",
- "owner": {
- "substance": {
- "uuid": "XLSX-d3a9ce39-6c15-3e4b-a5ce-5ea23e45ff16"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "110",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "110",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "NRK-52E",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1926.134
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2881.251
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 38.205
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-1a102274-4a1c-4401-b0fd-b7e4db80dd2d.json b/test/data/enm/study-XLSX-1a102274-4a1c-4401-b0fd-b7e4db80dd2d.json
deleted file mode 100644
index 0dae113..0000000
--- a/test/data/enm/study-XLSX-1a102274-4a1c-4401-b0fd-b7e4db80dd2d.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-1a102274-4a1c-4401-b0fd-b7e4db80dd2d",
- "owner": {
- "substance": {
- "uuid": "XLSX-56c58705-05c6-304f-bb42-a3a328e06319"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "182",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "182",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": 24.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-1ac4715c-b706-4b43-9ec9-323a6b11e21a.json b/test/data/enm/study-XLSX-1ac4715c-b706-4b43-9ec9-323a6b11e21a.json
deleted file mode 100644
index 4dde734..0000000
--- a/test/data/enm/study-XLSX-1ac4715c-b706-4b43-9ec9-323a6b11e21a.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-1ac4715c-b706-4b43-9ec9-323a6b11e21a",
- "owner": {
- "substance": {
- "uuid": "XLSX-945d75a3-50b7-3655-8979-376d39096378"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "030",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "030",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NRK-52E",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 302.112
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2078.222
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 71.044
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-1b097f33-a770-4c45-99f4-9d400e1bc809.json b/test/data/enm/study-XLSX-1b097f33-a770-4c45-99f4-9d400e1bc809.json
deleted file mode 100644
index 2f220c5..0000000
--- a/test/data/enm/study-XLSX-1b097f33-a770-4c45-99f4-9d400e1bc809.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-1b097f33-a770-4c45-99f4-9d400e1bc809",
- "owner": {
- "substance": {
- "uuid": "XLSX-5d7807f7-a13b-392f-88af-fe7885a67502"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "170",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "170",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": 24.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-1b1c6745-05b3-46ef-a322-f2399b831032.json b/test/data/enm/study-XLSX-1b1c6745-05b3-46ef-a322-f2399b831032.json
deleted file mode 100644
index f7d550d..0000000
--- a/test/data/enm/study-XLSX-1b1c6745-05b3-46ef-a322-f2399b831032.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "XLSX-1b1c6745-05b3-46ef-a322-f2399b831032",
- "owner": {
- "substance": {
- "uuid": "XLSX-ad0a7571-a887-3611-a508-f32ad71f20be"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "079",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "079",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Bath"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 25.08
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 25.08
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-1c2549a4-d71e-4f9e-9d92-aa002568b9d9.json b/test/data/enm/study-XLSX-1c2549a4-d71e-4f9e-9d92-aa002568b9d9.json
deleted file mode 100644
index 353d59c..0000000
--- a/test/data/enm/study-XLSX-1c2549a4-d71e-4f9e-9d92-aa002568b9d9.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-1c2549a4-d71e-4f9e-9d92-aa002568b9d9",
- "owner": {
- "substance": {
- "uuid": "XLSX-d4f2714a-a7f6-305a-af41-18d8129fef13"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "184",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "184",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "circles, ellipses, rectangles or squares"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-1d43008c-9331-43a7-b5ef-79ecc1c85fe2.json b/test/data/enm/study-XLSX-1d43008c-9331-43a7-b5ef-79ecc1c85fe2.json
deleted file mode 100644
index e3d6962..0000000
--- a/test/data/enm/study-XLSX-1d43008c-9331-43a7-b5ef-79ecc1c85fe2.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-1d43008c-9331-43a7-b5ef-79ecc1c85fe2",
- "owner": {
- "substance": {
- "uuid": "XLSX-92788191-34d9-39b4-aa9c-503da51fc1a6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "134",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "134",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2 g−1",
- "loValue": 56
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-1db4a2e8-b624-48b8-95be-c09f7af79adc.json b/test/data/enm/study-XLSX-1db4a2e8-b624-48b8-95be-c09f7af79adc.json
deleted file mode 100644
index 1422f27..0000000
--- a/test/data/enm/study-XLSX-1db4a2e8-b624-48b8-95be-c09f7af79adc.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-1db4a2e8-b624-48b8-95be-c09f7af79adc",
- "owner": {
- "substance": {
- "uuid": "XLSX-58c9f610-0fef-3009-8112-6ea05d863644"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "168",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "168",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": 24.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-1df27ead-0ce1-4b88-b3f5-6c738d2d2393.json b/test/data/enm/study-XLSX-1df27ead-0ce1-4b88-b3f5-6c738d2d2393.json
deleted file mode 100644
index c8c5268..0000000
--- a/test/data/enm/study-XLSX-1df27ead-0ce1-4b88-b3f5-6c738d2d2393.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-1df27ead-0ce1-4b88-b3f5-6c738d2d2393",
- "owner": {
- "substance": {
- "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "071",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "071",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "U-87 MG",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 1,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 45.546
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 145.33
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 3.991
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-1df396e3-b0b0-48f5-a227-1d9ed7f08c1f.json b/test/data/enm/study-XLSX-1df396e3-b0b0-48f5-a227-1d9ed7f08c1f.json
deleted file mode 100644
index 8ed19db..0000000
--- a/test/data/enm/study-XLSX-1df396e3-b0b0-48f5-a227-1d9ed7f08c1f.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-1df396e3-b0b0-48f5-a227-1d9ed7f08c1f",
- "owner": {
- "substance": {
- "uuid": "XLSX-12620892-23e5-37f4-9644-a82c4240d695"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "150",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1911_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1911",
- "title": "NPO_1911 MTT Assay"
- },
- "endpoint": "150",
- "guideline": [
- "MTT"
- ]
- },
- "parameters": {
- "Cell line": "mES",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 240,
- "Serum concentration,%": 0.15
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 14.691
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 23.02
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.333
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-1fa5b4c0-a1b6-479b-9b82-9a6dc476ef0f.json b/test/data/enm/study-XLSX-1fa5b4c0-a1b6-479b-9b82-9a6dc476ef0f.json
deleted file mode 100644
index 9397487..0000000
--- a/test/data/enm/study-XLSX-1fa5b4c0-a1b6-479b-9b82-9a6dc476ef0f.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-1fa5b4c0-a1b6-479b-9b82-9a6dc476ef0f",
- "owner": {
- "substance": {
- "uuid": "XLSX-95020ff3-17ee-3889-8a9f-f2555dc4a930"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "003",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "003",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1101.763
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1496.276
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 15.78
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-1fe9d3e6-1258-4234-a08f-9c62158b945e.json b/test/data/enm/study-XLSX-1fe9d3e6-1258-4234-a08f-9c62158b945e.json
deleted file mode 100644
index 7bc977a..0000000
--- a/test/data/enm/study-XLSX-1fe9d3e6-1258-4234-a08f-9c62158b945e.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "XLSX-1fe9d3e6-1258-4234-a08f-9c62158b945e",
- "owner": {
- "substance": {
- "uuid": "XLSX-56c58705-05c6-304f-bb42-a3a328e06319"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "182",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "182",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2/g",
- "loQualifier": ">=",
- "loValue": 11.8,
- "upQualifier": "<=",
- "upValue": 13
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-20399224-20cf-4682-b63b-1039bc81695b.json b/test/data/enm/study-XLSX-20399224-20cf-4682-b63b-1039bc81695b.json
deleted file mode 100644
index 548e50d..0000000
--- a/test/data/enm/study-XLSX-20399224-20cf-4682-b63b-1039bc81695b.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-20399224-20cf-4682-b63b-1039bc81695b",
- "owner": {
- "substance": {
- "uuid": "XLSX-3ff81e94-3d5d-3e58-a761-b0bd7c94de3b"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "105",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "105",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "16HBE",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 156.845
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 210.467
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2.145
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-22248ab3-3273-493e-ad41-52e09a44fdea.json b/test/data/enm/study-XLSX-22248ab3-3273-493e-ad41-52e09a44fdea.json
deleted file mode 100644
index f851fdc..0000000
--- a/test/data/enm/study-XLSX-22248ab3-3273-493e-ad41-52e09a44fdea.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-22248ab3-3273-493e-ad41-52e09a44fdea",
- "owner": {
- "substance": {
- "uuid": "XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "053",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "053",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "SK-OV-3",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 1,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 24.379
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 65.819
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.658
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-23143cb6-d5bf-43d6-999e-9e7fb8940fe7.json b/test/data/enm/study-XLSX-23143cb6-d5bf-43d6-999e-9e7fb8940fe7.json
deleted file mode 100644
index d5b3bbc..0000000
--- a/test/data/enm/study-XLSX-23143cb6-d5bf-43d6-999e-9e7fb8940fe7.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "XLSX-23143cb6-d5bf-43d6-999e-9e7fb8940fe7",
- "owner": {
- "substance": {
- "uuid": "XLSX-a44564c5-1458-3e3b-aca7-d63f5221d2a8"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "183",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "183",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2/g",
- "loQualifier": ">=",
- "loValue": 11.8,
- "upQualifier": "<=",
- "upValue": 13
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-23aaaee0-4bb6-4447-b9f8-6423d81d4460.json b/test/data/enm/study-XLSX-23aaaee0-4bb6-4447-b9f8-6423d81d4460.json
deleted file mode 100644
index b339206..0000000
--- a/test/data/enm/study-XLSX-23aaaee0-4bb6-4447-b9f8-6423d81d4460.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-23aaaee0-4bb6-4447-b9f8-6423d81d4460",
- "owner": {
- "substance": {
- "uuid": "XLSX-adf890e9-3623-3a0e-b601-11f8e5e2f3cb"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "018",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "018",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Bath"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 14
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 15
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 65
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-23c00b7e-0c1e-4ed9-9073-70930288b37f.json b/test/data/enm/study-XLSX-23c00b7e-0c1e-4ed9-9073-70930288b37f.json
deleted file mode 100644
index 533ada1..0000000
--- a/test/data/enm/study-XLSX-23c00b7e-0c1e-4ed9-9073-70930288b37f.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "XLSX-23c00b7e-0c1e-4ed9-9073-70930288b37f",
- "owner": {
- "substance": {
- "uuid": "XLSX-58c9f610-0fef-3009-8112-6ea05d863644"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "168",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "168",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2/g",
- "loQualifier": ">=",
- "loValue": 11.8,
- "upQualifier": "<=",
- "upValue": 13
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-249e9ccd-a8c0-4af6-8c89-140de02e31c5.json b/test/data/enm/study-XLSX-249e9ccd-a8c0-4af6-8c89-140de02e31c5.json
deleted file mode 100644
index 9a54cf3..0000000
--- a/test/data/enm/study-XLSX-249e9ccd-a8c0-4af6-8c89-140de02e31c5.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-249e9ccd-a8c0-4af6-8c89-140de02e31c5",
- "owner": {
- "substance": {
- "uuid": "XLSX-3ff81e94-3d5d-3e58-a761-b0bd7c94de3b"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "104",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "104",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "16HBE",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 215.124
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 285.52
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2.816
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-2567f730-1b78-4437-9b91-6fe79998ec50.json b/test/data/enm/study-XLSX-2567f730-1b78-4437-9b91-6fe79998ec50.json
deleted file mode 100644
index eba22e2..0000000
--- a/test/data/enm/study-XLSX-2567f730-1b78-4437-9b91-6fe79998ec50.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-2567f730-1b78-4437-9b91-6fe79998ec50",
- "owner": {
- "substance": {
- "uuid": "XLSX-7677801c-4895-3ffd-807a-832c589341df"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "151",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "151",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2/g",
- "loValue": 56.261
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-259e7246-9990-49d6-af3c-5940e833c059.json b/test/data/enm/study-XLSX-259e7246-9990-49d6-af3c-5940e833c059.json
deleted file mode 100644
index fdc5ee7..0000000
--- a/test/data/enm/study-XLSX-259e7246-9990-49d6-af3c-5940e833c059.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-259e7246-9990-49d6-af3c-5940e833c059",
- "owner": {
- "substance": {
- "uuid": "XLSX-adf890e9-3623-3a0e-b601-11f8e5e2f3cb"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "016",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "016",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NRK-52E",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 7.617
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 12.494
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.195
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-25ab373b-b8e3-42aa-aea9-ff903abae4de.json b/test/data/enm/study-XLSX-25ab373b-b8e3-42aa-aea9-ff903abae4de.json
deleted file mode 100644
index 406023b..0000000
--- a/test/data/enm/study-XLSX-25ab373b-b8e3-42aa-aea9-ff903abae4de.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-25ab373b-b8e3-42aa-aea9-ff903abae4de",
- "owner": {
- "substance": {
- "uuid": "XLSX-254d54ae-e3ba-36d9-8dbd-c84d2296bb24"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "142",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1911_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1911",
- "title": "NPO_1911 MTT Assay"
- },
- "endpoint": "142",
- "guideline": [
- "MTT"
- ]
- },
- "parameters": {
- "Cell line": "mES",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 240,
- "Serum concentration,%": 0.15
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.404
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.264
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.034
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-2638bbbd-2ae0-46b0-a660-12ac80d6da80.json b/test/data/enm/study-XLSX-2638bbbd-2ae0-46b0-a660-12ac80d6da80.json
deleted file mode 100644
index d448a54..0000000
--- a/test/data/enm/study-XLSX-2638bbbd-2ae0-46b0-a660-12ac80d6da80.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-2638bbbd-2ae0-46b0-a660-12ac80d6da80",
- "owner": {
- "substance": {
- "uuid": "XLSX-f1b0af03-df66-3849-93cc-4ca706c0f751"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "166",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "166",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 14.456
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 34.073
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.785
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-2641b5f1-c384-4451-ac4e-1cd0862b73b5.json b/test/data/enm/study-XLSX-2641b5f1-c384-4451-ac4e-1cd0862b73b5.json
deleted file mode 100644
index 69a1627..0000000
--- a/test/data/enm/study-XLSX-2641b5f1-c384-4451-ac4e-1cd0862b73b5.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-2641b5f1-c384-4451-ac4e-1cd0862b73b5",
- "owner": {
- "substance": {
- "uuid": "XLSX-92788191-34d9-39b4-aa9c-503da51fc1a6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "134",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "134",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": -20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-267757f5-aae8-4d00-ac70-960a493cdd12.json b/test/data/enm/study-XLSX-267757f5-aae8-4d00-ac70-960a493cdd12.json
deleted file mode 100644
index 201d95a..0000000
--- a/test/data/enm/study-XLSX-267757f5-aae8-4d00-ac70-960a493cdd12.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-267757f5-aae8-4d00-ac70-960a493cdd12",
- "owner": {
- "substance": {
- "uuid": "XLSX-12620892-23e5-37f4-9644-a82c4240d695"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "150",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "150",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2/g",
- "loValue": 56.261
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-28381dd3-7257-4b83-a27f-d84dfc23c94c.json b/test/data/enm/study-XLSX-28381dd3-7257-4b83-a27f-d84dfc23c94c.json
deleted file mode 100644
index eaa6621..0000000
--- a/test/data/enm/study-XLSX-28381dd3-7257-4b83-a27f-d84dfc23c94c.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-28381dd3-7257-4b83-a27f-d84dfc23c94c",
- "owner": {
- "substance": {
- "uuid": "XLSX-d7934c3e-9eac-34bc-8c60-4cf0c46e92a3"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "006",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "006",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 7.984
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 26.585
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.744
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-28687db2-d96f-4ae7-a9e5-347348512eed.json b/test/data/enm/study-XLSX-28687db2-d96f-4ae7-a9e5-347348512eed.json
deleted file mode 100644
index 7278cd1..0000000
--- a/test/data/enm/study-XLSX-28687db2-d96f-4ae7-a9e5-347348512eed.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-28687db2-d96f-4ae7-a9e5-347348512eed",
- "owner": {
- "substance": {
- "uuid": "XLSX-254d54ae-e3ba-36d9-8dbd-c84d2296bb24"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "142",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "142",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": 40
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-2896e48d-b164-444c-a1f3-10efee60ff1b.json b/test/data/enm/study-XLSX-2896e48d-b164-444c-a1f3-10efee60ff1b.json
deleted file mode 100644
index 9db804a..0000000
--- a/test/data/enm/study-XLSX-2896e48d-b164-444c-a1f3-10efee60ff1b.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-2896e48d-b164-444c-a1f3-10efee60ff1b",
- "owner": {
- "substance": {
- "uuid": "XLSX-de76fc02-ef1f-310a-b61f-6aab5b586412"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "114",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "114",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 921.917
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2602.602
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 67.227
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-28eafb1b-d6b3-433a-90b0-de8915c708e0.json b/test/data/enm/study-XLSX-28eafb1b-d6b3-433a-90b0-de8915c708e0.json
deleted file mode 100644
index a055673..0000000
--- a/test/data/enm/study-XLSX-28eafb1b-d6b3-433a-90b0-de8915c708e0.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "XLSX-28eafb1b-d6b3-433a-90b0-de8915c708e0",
- "owner": {
- "substance": {
- "uuid": "XLSX-c42f434e-6295-3715-8a23-ce26f87642a6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "188",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "188",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Tip"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 9
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 10.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-29796c5e-00be-414f-8304-b40efd9d8d5a.json b/test/data/enm/study-XLSX-29796c5e-00be-414f-8304-b40efd9d8d5a.json
deleted file mode 100644
index a9d1517..0000000
--- a/test/data/enm/study-XLSX-29796c5e-00be-414f-8304-b40efd9d8d5a.json
+++ /dev/null
@@ -1,1016 +0,0 @@
-{
- "uuid": "XLSX-29796c5e-00be-414f-8304-b40efd9d8d5a",
- "owner": {
- "substance": {
- "uuid": "XLSX-fa48e134-54cf-3417-a63a-6f744191cec2"
- },
- "company": {
- "uuid": "XLSX-4bb81f08-059d-32ad-b5fd-71c6bcc6e0db",
- "name": "FP7 MARINA"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1371/journal.pone.0127174",
- "year": "2015",
- "owner": "P32 - KI"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "Cell viability - cell membrane damage: Lactate dehydrogenase assay (LDH) (CytoTox 96® Non-radioactive cytotoxicity assay - Promega, G1780) ",
- "guideline": [
- "Cytotoxicity using human monocyte-derived macrophages (HMDM)"
- ]
- },
- "parameters": {
- "CHMO:0002774": "N",
- "CLO_0000031": "HMDM",
- "CLO_0000031 EFO_0004443": "Karolinska University Hospital, Stockholm, Sweden - buffy coats from healthy adult blood donors ",
- "Cell culture conditions - Serum": "FBS (Gibco, 10500) ",
- "Cell culture conditions - Serum concentration in growth medium": 0.1,
- "Cell culture conditions - Serum concentration in treatment medium": "0,05%",
- "Cell line/Type - Full name": "Primary human monocyte-derived macrophages (HMDM)",
- "Dispersion agent": "water with 0,05% BSA",
- "NPO_1952": "Y",
- "NPO_1961": "Y",
- "NPO_1969 OBI_0000272": "NANOGENOTOX Dispersion protocol (http://www.nanogenotox.eu/files/PDF/web%20nanogenotox%20dispersion%20protocol.pdf) ",
- "OBI_0001911 BAO_0000114": "RPMI (Sigma, R0833)"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 96.244
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 97.04
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 92.331
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 92.2
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 94.548
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 91.351
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 88.663
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100.657
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 102.033
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 102.058
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 101.331
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 103.58
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 103.111
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 102.116
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 106.119
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 99.162
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 101.619
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 93.146
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 91.801
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 98.457
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 78.147
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 85.847
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 84.564
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 68.466
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 69.795
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 71.551
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 42.512
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 58.861
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 95.042
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 99.02
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 77.547
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 73.485
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 64.706
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 72.679
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 56.168
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 109.581
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 116.075
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 95.767
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 90.067
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100.967
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 96.509
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 96.421
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-29a4590d-58e8-4505-af16-6b3317e95381.json b/test/data/enm/study-XLSX-29a4590d-58e8-4505-af16-6b3317e95381.json
deleted file mode 100644
index 5eea29b..0000000
--- a/test/data/enm/study-XLSX-29a4590d-58e8-4505-af16-6b3317e95381.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-29a4590d-58e8-4505-af16-6b3317e95381",
- "owner": {
- "substance": {
- "uuid": "XLSX-a1b25bf2-6046-3c16-ba1c-3efb11b5a4d6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "156",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "156",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": -29
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-2a76a600-51e5-4b9c-854f-b7a24ae94fbf.json b/test/data/enm/study-XLSX-2a76a600-51e5-4b9c-854f-b7a24ae94fbf.json
deleted file mode 100644
index 694d194..0000000
--- a/test/data/enm/study-XLSX-2a76a600-51e5-4b9c-854f-b7a24ae94fbf.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-2a76a600-51e5-4b9c-854f-b7a24ae94fbf",
- "owner": {
- "substance": {
- "uuid": "XLSX-64e97bde-be4b-34fb-b216-85724e66b02a"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "152",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "152",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Cup Horn",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 105.565
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 187.846
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 3.291
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-2b2f6867-cc9c-440b-97c2-df75bed08c76.json b/test/data/enm/study-XLSX-2b2f6867-cc9c-440b-97c2-df75bed08c76.json
deleted file mode 100644
index 4dce55c..0000000
--- a/test/data/enm/study-XLSX-2b2f6867-cc9c-440b-97c2-df75bed08c76.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-2b2f6867-cc9c-440b-97c2-df75bed08c76",
- "owner": {
- "substance": {
- "uuid": "XLSX-bbff7bfc-273b-3dfb-be71-5afb33113e53"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "022",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "022",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Vortexing"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 79
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 79
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 141
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-2d3e17da-204b-4822-8543-e890ac70619a.json b/test/data/enm/study-XLSX-2d3e17da-204b-4822-8543-e890ac70619a.json
deleted file mode 100644
index 7d85f83..0000000
--- a/test/data/enm/study-XLSX-2d3e17da-204b-4822-8543-e890ac70619a.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-2d3e17da-204b-4822-8543-e890ac70619a",
- "owner": {
- "substance": {
- "uuid": "XLSX-aa7e2fd6-c054-35ed-a9d9-1f40c1d179a3"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "141",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "141",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Tip"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 21.45
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 37.6
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 315
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-2d5487cc-4302-4093-9841-3e24ebdfa7de.json b/test/data/enm/study-XLSX-2d5487cc-4302-4093-9841-3e24ebdfa7de.json
deleted file mode 100644
index 0df3408..0000000
--- a/test/data/enm/study-XLSX-2d5487cc-4302-4093-9841-3e24ebdfa7de.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-2d5487cc-4302-4093-9841-3e24ebdfa7de",
- "owner": {
- "substance": {
- "uuid": "XLSX-295d65e6-0d6e-3987-a67f-e4482fa28c71"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "099",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "099",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Stirring"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 143
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 143
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 131
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-2d64503d-3639-4667-b900-3ac40cd0ea06.json b/test/data/enm/study-XLSX-2d64503d-3639-4667-b900-3ac40cd0ea06.json
deleted file mode 100644
index 0fd4798..0000000
--- a/test/data/enm/study-XLSX-2d64503d-3639-4667-b900-3ac40cd0ea06.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "XLSX-2d64503d-3639-4667-b900-3ac40cd0ea06",
- "owner": {
- "substance": {
- "uuid": "XLSX-3dac4f9c-8c47-3085-9781-e70583adb12f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "167",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "167",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2/g",
- "loQualifier": ">=",
- "loValue": 11.8,
- "upQualifier": "<=",
- "upValue": 13
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-2d7d8d78-73a9-43f1-9ff2-a04758ba0533.json b/test/data/enm/study-XLSX-2d7d8d78-73a9-43f1-9ff2-a04758ba0533.json
deleted file mode 100644
index 8acff85..0000000
--- a/test/data/enm/study-XLSX-2d7d8d78-73a9-43f1-9ff2-a04758ba0533.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "XLSX-2d7d8d78-73a9-43f1-9ff2-a04758ba0533",
- "owner": {
- "substance": {
- "uuid": "XLSX-00cd0ac9-9adc-38a5-9520-89ddd591f75f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "192",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "192",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Tip"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 160
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 192
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-2db19dc9-6f15-43fc-800a-769041dc2654.json b/test/data/enm/study-XLSX-2db19dc9-6f15-43fc-800a-769041dc2654.json
deleted file mode 100644
index f3322b7..0000000
--- a/test/data/enm/study-XLSX-2db19dc9-6f15-43fc-800a-769041dc2654.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-2db19dc9-6f15-43fc-800a-769041dc2654",
- "owner": {
- "substance": {
- "uuid": "XLSX-3ff81e94-3d5d-3e58-a761-b0bd7c94de3b"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "107",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "107",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 80.358
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 165.824
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 3.419
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-2e324464-52d5-47cc-8cf2-2d70d40e6266.json b/test/data/enm/study-XLSX-2e324464-52d5-47cc-8cf2-2d70d40e6266.json
deleted file mode 100644
index dad5ad7..0000000
--- a/test/data/enm/study-XLSX-2e324464-52d5-47cc-8cf2-2d70d40e6266.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-2e324464-52d5-47cc-8cf2-2d70d40e6266",
- "owner": {
- "substance": {
- "uuid": "XLSX-6fac9681-a5c7-337c-9e35-87c04579f0e6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "083",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "083",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Stirring",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 434.784
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1152.185
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 28.696
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-2e9edef4-d8c4-47c3-ae83-ae079149642c.json b/test/data/enm/study-XLSX-2e9edef4-d8c4-47c3-ae83-ae079149642c.json
deleted file mode 100644
index 3146b5c..0000000
--- a/test/data/enm/study-XLSX-2e9edef4-d8c4-47c3-ae83-ae079149642c.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-2e9edef4-d8c4-47c3-ae83-ae079149642c",
- "owner": {
- "substance": {
- "uuid": "XLSX-5efaa24e-6eb5-3f1f-a9f4-680bc92364d6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "123",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "123",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "sphere"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-2ea7e225-0ab5-4525-a5a0-dbf697effaef.json b/test/data/enm/study-XLSX-2ea7e225-0ab5-4525-a5a0-dbf697effaef.json
deleted file mode 100644
index f3245ff..0000000
--- a/test/data/enm/study-XLSX-2ea7e225-0ab5-4525-a5a0-dbf697effaef.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-2ea7e225-0ab5-4525-a5a0-dbf697effaef",
- "owner": {
- "substance": {
- "uuid": "XLSX-56c58705-05c6-304f-bb42-a3a328e06319"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "182",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "182",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "16HBE",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.05
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 8.032
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 9.734
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.068
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-301fd1d5-cd81-4641-917c-7628be4bf734.json b/test/data/enm/study-XLSX-301fd1d5-cd81-4641-917c-7628be4bf734.json
deleted file mode 100644
index 8787e6a..0000000
--- a/test/data/enm/study-XLSX-301fd1d5-cd81-4641-917c-7628be4bf734.json
+++ /dev/null
@@ -1,696 +0,0 @@
-{
- "uuid": "XLSX-301fd1d5-cd81-4641-917c-7628be4bf734",
- "owner": {
- "substance": {
- "uuid": "XLSX-93b2da85-fc0c-315f-8d3b-77f1a7776fb4"
- },
- "company": {
- "uuid": "XLSX-4bb81f08-059d-32ad-b5fd-71c6bcc6e0db",
- "name": "FP7 MARINA"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1371/journal.pone.0127174",
- "year": "2015",
- "owner": "P32 - KI"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002993_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002993",
- "title": "BAO_0002993 Cytotoxicity Assay"
- },
- "endpoint": "",
- "guideline": [
- "ELISA / TNF-α release in culture medium"
- ]
- },
- "parameters": {
- "CHMO:0002774": "Y",
- "CLO_0000031": "HMDM (primary cells)",
- "CLO_0000031 EFO_0004443": "ATCC",
- "Cell culture conditions - Serum": "FBS (Gibco/413105K) ",
- "Cell culture conditions - Serum concentration in growth medium": 0.1,
- "Cell culture conditions - Serum concentration in treatment medium": 0.1,
- "Cell line/Type - Full name": "human monocyte-derived macrophages (HMDM)",
- "Dispersion agent": "water with 0,05% BSA",
- "NPO_1952": "N",
- "NPO_1961": "N",
- "NPO_1969 OBI_0000272": "NANOGENOTOX Dispersion protocol (http://www.nanogenotox.eu/files/PDF/web%20nanogenotox%20dispersion%20protocol.pdf) ",
- "OBI_0001911 BAO_0000114": "RPMI (Sigma, RNBB2729 "
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 3.092
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 9.627
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 3.7
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 12.022
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 13.495
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 11.939
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 9.904
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 9.839
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 0.874
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 2.035
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 2.071
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 2.04
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 2.536
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 2.801
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 6.024
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 3.218
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 9.147
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 13.019
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 12.83
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 12.336
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 18.473
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 25.681
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 22.385
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 18.916
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 21.04
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 29.97
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 26.508
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 30.14
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 43.317
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 44.152
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 51.261
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 63.261
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-3064e0bc-9082-44a7-a4bd-3add51baca08.json b/test/data/enm/study-XLSX-3064e0bc-9082-44a7-a4bd-3add51baca08.json
deleted file mode 100644
index 1473c8f..0000000
--- a/test/data/enm/study-XLSX-3064e0bc-9082-44a7-a4bd-3add51baca08.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-3064e0bc-9082-44a7-a4bd-3add51baca08",
- "owner": {
- "substance": {
- "uuid": "XLSX-d3a9ce39-6c15-3e4b-a5ce-5ea23e45ff16"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "113",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "113",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "subangular to rounded"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.567
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-30e50959-2e9e-4681-8da4-fc1ab241354c.json b/test/data/enm/study-XLSX-30e50959-2e9e-4681-8da4-fc1ab241354c.json
deleted file mode 100644
index 2e4cca6..0000000
--- a/test/data/enm/study-XLSX-30e50959-2e9e-4681-8da4-fc1ab241354c.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-30e50959-2e9e-4681-8da4-fc1ab241354c",
- "owner": {
- "substance": {
- "uuid": "XLSX-673c8355-a823-3bf2-a319-0d8af43e4d90"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "144",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "144",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 132.853
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 151.197
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.734
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-3161393e-b37f-4ff5-a4fd-359e79dc7cef.json b/test/data/enm/study-XLSX-3161393e-b37f-4ff5-a4fd-359e79dc7cef.json
deleted file mode 100644
index 253f17c..0000000
--- a/test/data/enm/study-XLSX-3161393e-b37f-4ff5-a4fd-359e79dc7cef.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-3161393e-b37f-4ff5-a4fd-359e79dc7cef",
- "owner": {
- "substance": {
- "uuid": "XLSX-0bfa2e41-c6b6-3cbf-8a1e-73bf006768ab"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "026",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "026",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Bath"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 25.3
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 25.3
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 10
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-31da7451-4360-45c4-ae93-daa94821da85.json b/test/data/enm/study-XLSX-31da7451-4360-45c4-ae93-daa94821da85.json
deleted file mode 100644
index 380cf86..0000000
--- a/test/data/enm/study-XLSX-31da7451-4360-45c4-ae93-daa94821da85.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-31da7451-4360-45c4-ae93-daa94821da85",
- "owner": {
- "substance": {
- "uuid": "XLSX-38666e26-8f8e-37a4-b97c-728a1e5aa0f2"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "037",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "037",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NRK-52E",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2494.318
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 27155.059
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 986.43
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-34b4f996-cc95-4b5a-94c7-f4635657c399.json b/test/data/enm/study-XLSX-34b4f996-cc95-4b5a-94c7-f4635657c399.json
deleted file mode 100644
index 07dc072..0000000
--- a/test/data/enm/study-XLSX-34b4f996-cc95-4b5a-94c7-f4635657c399.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-34b4f996-cc95-4b5a-94c7-f4635657c399",
- "owner": {
- "substance": {
- "uuid": "XLSX-f94651ce-fd32-3306-8f89-32ffdf533be9"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "159",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1911_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1911",
- "title": "NPO_1911 MTT Assay"
- },
- "endpoint": "159",
- "guideline": [
- "MTT"
- ]
- },
- "parameters": {
- "Cell line": "SH-SY5Y",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 6,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1260.242
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1635.256
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 15.001
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-35d3520c-fa44-4fbf-9e1c-6a9495ee2f4b.json b/test/data/enm/study-XLSX-35d3520c-fa44-4fbf-9e1c-6a9495ee2f4b.json
deleted file mode 100644
index f1c01d6..0000000
--- a/test/data/enm/study-XLSX-35d3520c-fa44-4fbf-9e1c-6a9495ee2f4b.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-35d3520c-fa44-4fbf-9e1c-6a9495ee2f4b",
- "owner": {
- "substance": {
- "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "075",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "075",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "U-87 MG",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 72,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 117.272
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 305.852
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 7.543
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-35de3d4f-c3d6-4659-922f-b2c5f4b12237.json b/test/data/enm/study-XLSX-35de3d4f-c3d6-4659-922f-b2c5f4b12237.json
deleted file mode 100644
index 0b30fa0..0000000
--- a/test/data/enm/study-XLSX-35de3d4f-c3d6-4659-922f-b2c5f4b12237.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-35de3d4f-c3d6-4659-922f-b2c5f4b12237",
- "owner": {
- "substance": {
- "uuid": "XLSX-adf890e9-3623-3a0e-b601-11f8e5e2f3cb"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "018",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "018",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": -14
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-36575b6d-8c77-4be4-b386-5c71cf6e730d.json b/test/data/enm/study-XLSX-36575b6d-8c77-4be4-b386-5c71cf6e730d.json
deleted file mode 100644
index d9d2631..0000000
--- a/test/data/enm/study-XLSX-36575b6d-8c77-4be4-b386-5c71cf6e730d.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-36575b6d-8c77-4be4-b386-5c71cf6e730d",
- "owner": {
- "substance": {
- "uuid": "XLSX-945d75a3-50b7-3655-8979-376d39096378"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "031",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "031",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Tip"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 11
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 846
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 209
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-37fcce91-c08d-4940-97fe-b7c4dec0c132.json b/test/data/enm/study-XLSX-37fcce91-c08d-4940-97fe-b7c4dec0c132.json
deleted file mode 100644
index a344c8b..0000000
--- a/test/data/enm/study-XLSX-37fcce91-c08d-4940-97fe-b7c4dec0c132.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "XLSX-37fcce91-c08d-4940-97fe-b7c4dec0c132",
- "owner": {
- "substance": {
- "uuid": "XLSX-f1b0af03-df66-3849-93cc-4ca706c0f751"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "166",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "166",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2/g",
- "loQualifier": ">=",
- "loValue": 11.8,
- "upQualifier": "<=",
- "upValue": 13
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-39c0229d-4603-46be-a045-295259f1be57.json b/test/data/enm/study-XLSX-39c0229d-4603-46be-a045-295259f1be57.json
deleted file mode 100644
index 9ad2f33..0000000
--- a/test/data/enm/study-XLSX-39c0229d-4603-46be-a045-295259f1be57.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-39c0229d-4603-46be-a045-295259f1be57",
- "owner": {
- "substance": {
- "uuid": "XLSX-acb82e6d-63d6-3cf4-a796-a281b1ba835f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "011",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "011",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 149.154
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 229.202
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 3.202
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-39fae5c8-0a37-4a1e-b0e1-27fbbc64a752.json b/test/data/enm/study-XLSX-39fae5c8-0a37-4a1e-b0e1-27fbbc64a752.json
deleted file mode 100644
index ec38e42..0000000
--- a/test/data/enm/study-XLSX-39fae5c8-0a37-4a1e-b0e1-27fbbc64a752.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-39fae5c8-0a37-4a1e-b0e1-27fbbc64a752",
- "owner": {
- "substance": {
- "uuid": "XLSX-aa7e2fd6-c054-35ed-a9d9-1f40c1d179a3"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "139",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "139",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NRK-52E",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1284.354
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 6807.888
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 220.941
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-3afe4ec2-f95d-45b5-bec2-7688ab47e4cf.json b/test/data/enm/study-XLSX-3afe4ec2-f95d-45b5-bec2-7688ab47e4cf.json
deleted file mode 100644
index cd31eb5..0000000
--- a/test/data/enm/study-XLSX-3afe4ec2-f95d-45b5-bec2-7688ab47e4cf.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-3afe4ec2-f95d-45b5-bec2-7688ab47e4cf",
- "owner": {
- "substance": {
- "uuid": "XLSX-3ff81e94-3d5d-3e58-a761-b0bd7c94de3b"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "107",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "107",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Vortexing"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 42
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 50
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 49
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-3b66b438-3970-46dd-b0e2-a8c3fe971e27.json b/test/data/enm/study-XLSX-3b66b438-3970-46dd-b0e2-a8c3fe971e27.json
deleted file mode 100644
index 900c461..0000000
--- a/test/data/enm/study-XLSX-3b66b438-3970-46dd-b0e2-a8c3fe971e27.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-3b66b438-3970-46dd-b0e2-a8c3fe971e27",
- "owner": {
- "substance": {
- "uuid": "XLSX-6fac9681-a5c7-337c-9e35-87c04579f0e6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "083",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "083",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 92
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-3ec4604b-9615-4c7c-920d-ed501d0d3095.json b/test/data/enm/study-XLSX-3ec4604b-9615-4c7c-920d-ed501d0d3095.json
deleted file mode 100644
index ab58e7e..0000000
--- a/test/data/enm/study-XLSX-3ec4604b-9615-4c7c-920d-ed501d0d3095.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-3ec4604b-9615-4c7c-920d-ed501d0d3095",
- "owner": {
- "substance": {
- "uuid": "XLSX-1a8410a0-279c-3e82-bdfb-ce96b534df9b"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "020",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "020",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2/g",
- "loValue": 27.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-3f01349b-231d-4fc6-a823-e71837ac0d0c.json b/test/data/enm/study-XLSX-3f01349b-231d-4fc6-a823-e71837ac0d0c.json
deleted file mode 100644
index 91c3a11..0000000
--- a/test/data/enm/study-XLSX-3f01349b-231d-4fc6-a823-e71837ac0d0c.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "XLSX-3f01349b-231d-4fc6-a823-e71837ac0d0c",
- "owner": {
- "substance": {
- "uuid": "XLSX-5cd11301-7cf1-3402-aaf8-853e5ed8ccde"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "177",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "177",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2/g",
- "loQualifier": ">=",
- "loValue": 14.5,
- "upQualifier": "<=",
- "upValue": 15.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-3f4d5bc2-7087-4749-9cd2-9d33e1d21774.json b/test/data/enm/study-XLSX-3f4d5bc2-7087-4749-9cd2-9d33e1d21774.json
deleted file mode 100644
index 9142a42..0000000
--- a/test/data/enm/study-XLSX-3f4d5bc2-7087-4749-9cd2-9d33e1d21774.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-3f4d5bc2-7087-4749-9cd2-9d33e1d21774",
- "owner": {
- "substance": {
- "uuid": "XLSX-2aef353b-440f-32a7-8447-1974997a69a8"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "190",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "190",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": 33
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-404264d0-872c-4786-9a7e-d33621c1ede5.json b/test/data/enm/study-XLSX-404264d0-872c-4786-9a7e-d33621c1ede5.json
deleted file mode 100644
index d65cb10..0000000
--- a/test/data/enm/study-XLSX-404264d0-872c-4786-9a7e-d33621c1ede5.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-404264d0-872c-4786-9a7e-d33621c1ede5",
- "owner": {
- "substance": {
- "uuid": "XLSX-64e97bde-be4b-34fb-b216-85724e66b02a"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "153",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "153",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Cup Horn",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 129.826
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 306.435
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 7.064
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-40d900a9-1e08-4cf9-bc21-19f695cfb19b.json b/test/data/enm/study-XLSX-40d900a9-1e08-4cf9-bc21-19f695cfb19b.json
deleted file mode 100644
index a713be0..0000000
--- a/test/data/enm/study-XLSX-40d900a9-1e08-4cf9-bc21-19f695cfb19b.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-40d900a9-1e08-4cf9-bc21-19f695cfb19b",
- "owner": {
- "substance": {
- "uuid": "XLSX-295d65e6-0d6e-3987-a67f-e4482fa28c71"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "098",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "098",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Stirring",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1253.555
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1781.31
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 21.11
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-40fba3c0-4cba-47d5-a250-c23a2297fa4c.json b/test/data/enm/study-XLSX-40fba3c0-4cba-47d5-a250-c23a2297fa4c.json
deleted file mode 100644
index 94e35ea..0000000
--- a/test/data/enm/study-XLSX-40fba3c0-4cba-47d5-a250-c23a2297fa4c.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-40fba3c0-4cba-47d5-a250-c23a2297fa4c",
- "owner": {
- "substance": {
- "uuid": "XLSX-64e97bde-be4b-34fb-b216-85724e66b02a"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "153",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "153",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Cup Horn"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 17.3
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 24.2
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 2767
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-41595fe0-3c7b-4725-b209-f0267aa83da7.json b/test/data/enm/study-XLSX-41595fe0-3c7b-4725-b209-f0267aa83da7.json
deleted file mode 100644
index c6e9e78..0000000
--- a/test/data/enm/study-XLSX-41595fe0-3c7b-4725-b209-f0267aa83da7.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-41595fe0-3c7b-4725-b209-f0267aa83da7",
- "owner": {
- "substance": {
- "uuid": "XLSX-adf890e9-3623-3a0e-b601-11f8e5e2f3cb"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "015",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "015",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "NRK-52E",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 5.764
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 113.051
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4.291
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-41d9609b-1d68-442f-9896-03cc648e1240.json b/test/data/enm/study-XLSX-41d9609b-1d68-442f-9896-03cc648e1240.json
deleted file mode 100644
index 8a44229..0000000
--- a/test/data/enm/study-XLSX-41d9609b-1d68-442f-9896-03cc648e1240.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-41d9609b-1d68-442f-9896-03cc648e1240",
- "owner": {
- "substance": {
- "uuid": "XLSX-bbff7bfc-273b-3dfb-be71-5afb33113e53"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "022",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "022",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "sphere"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-422fff63-c923-410d-86d1-0a21e060ba0b.json b/test/data/enm/study-XLSX-422fff63-c923-410d-86d1-0a21e060ba0b.json
deleted file mode 100644
index deee23e..0000000
--- a/test/data/enm/study-XLSX-422fff63-c923-410d-86d1-0a21e060ba0b.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-422fff63-c923-410d-86d1-0a21e060ba0b",
- "owner": {
- "substance": {
- "uuid": "XLSX-945d75a3-50b7-3655-8979-376d39096378"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "031",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "031",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "(m2/g)",
- "loValue": 254
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-446676a2-9dc2-47f8-b1a6-f71f18e62e73.json b/test/data/enm/study-XLSX-446676a2-9dc2-47f8-b1a6-f71f18e62e73.json
deleted file mode 100644
index f1b767c..0000000
--- a/test/data/enm/study-XLSX-446676a2-9dc2-47f8-b1a6-f71f18e62e73.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-446676a2-9dc2-47f8-b1a6-f71f18e62e73",
- "owner": {
- "substance": {
- "uuid": "XLSX-a1b25bf2-6046-3c16-ba1c-3efb11b5a4d6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "156",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "156",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 84
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-4585d2c4-35ba-46e6-8923-87b8e0701cb3.json b/test/data/enm/study-XLSX-4585d2c4-35ba-46e6-8923-87b8e0701cb3.json
deleted file mode 100644
index decc461..0000000
--- a/test/data/enm/study-XLSX-4585d2c4-35ba-46e6-8923-87b8e0701cb3.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-4585d2c4-35ba-46e6-8923-87b8e0701cb3",
- "owner": {
- "substance": {
- "uuid": "XLSX-251091e3-55d1-36b3-854c-d1933ec46461"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "027",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "027",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "sphere"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-45aeb6a7-b132-404a-8702-f5988da7f94a.json b/test/data/enm/study-XLSX-45aeb6a7-b132-404a-8702-f5988da7f94a.json
deleted file mode 100644
index dd1196d..0000000
--- a/test/data/enm/study-XLSX-45aeb6a7-b132-404a-8702-f5988da7f94a.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-45aeb6a7-b132-404a-8702-f5988da7f94a",
- "owner": {
- "substance": {
- "uuid": "XLSX-7d5a7a1b-5069-3256-b796-2361afcf3bfe"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "032",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "032",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "Irregular entangled kinked and mostly bent "
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 79
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-45bd15a8-3413-4050-ae56-b76fd52cd676.json b/test/data/enm/study-XLSX-45bd15a8-3413-4050-ae56-b76fd52cd676.json
deleted file mode 100644
index 1b7e940..0000000
--- a/test/data/enm/study-XLSX-45bd15a8-3413-4050-ae56-b76fd52cd676.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-45bd15a8-3413-4050-ae56-b76fd52cd676",
- "owner": {
- "substance": {
- "uuid": "XLSX-bbff7bfc-273b-3dfb-be71-5afb33113e53"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "022",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "022",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2/g",
- "loValue": 7.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-47c449e6-57f0-416d-8b3b-bdf758f07c90.json b/test/data/enm/study-XLSX-47c449e6-57f0-416d-8b3b-bdf758f07c90.json
deleted file mode 100644
index 9252a40..0000000
--- a/test/data/enm/study-XLSX-47c449e6-57f0-416d-8b3b-bdf758f07c90.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-47c449e6-57f0-416d-8b3b-bdf758f07c90",
- "owner": {
- "substance": {
- "uuid": "XLSX-de76fc02-ef1f-310a-b61f-6aab5b586412"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "118",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "118",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 97.777
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 120.819
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.922
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-4983675e-d2fd-4212-bc78-f424507604c4.json b/test/data/enm/study-XLSX-4983675e-d2fd-4212-bc78-f424507604c4.json
deleted file mode 100644
index 6491086..0000000
--- a/test/data/enm/study-XLSX-4983675e-d2fd-4212-bc78-f424507604c4.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "XLSX-4983675e-d2fd-4212-bc78-f424507604c4",
- "owner": {
- "substance": {
- "uuid": "XLSX-2aef353b-440f-32a7-8447-1974997a69a8"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "190",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "190",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loQualifier": ">=",
- "loValue": 26.3,
- "upQualifier": "<=",
- "upValue": 28.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-4a8aca48-c975-468b-9be8-03c6e735baa7.json b/test/data/enm/study-XLSX-4a8aca48-c975-468b-9be8-03c6e735baa7.json
deleted file mode 100644
index b8692b4..0000000
--- a/test/data/enm/study-XLSX-4a8aca48-c975-468b-9be8-03c6e735baa7.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-4a8aca48-c975-468b-9be8-03c6e735baa7",
- "owner": {
- "substance": {
- "uuid": "XLSX-5d7807f7-a13b-392f-88af-fe7885a67502"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "170",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "170",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Bath"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 106
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 178
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 160
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-4b3b96a6-c670-4ed6-90b8-2afe609f597f.json b/test/data/enm/study-XLSX-4b3b96a6-c670-4ed6-90b8-2afe609f597f.json
deleted file mode 100644
index 25712f6..0000000
--- a/test/data/enm/study-XLSX-4b3b96a6-c670-4ed6-90b8-2afe609f597f.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-4b3b96a6-c670-4ed6-90b8-2afe609f597f",
- "owner": {
- "substance": {
- "uuid": "XLSX-d7934c3e-9eac-34bc-8c60-4cf0c46e92a3"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "008",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "008",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Bath"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 18.8
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 18.8
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 35
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-4b73086a-515b-40b6-8e23-358337ba64f2.json b/test/data/enm/study-XLSX-4b73086a-515b-40b6-8e23-358337ba64f2.json
deleted file mode 100644
index f971bef..0000000
--- a/test/data/enm/study-XLSX-4b73086a-515b-40b6-8e23-358337ba64f2.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-4b73086a-515b-40b6-8e23-358337ba64f2",
- "owner": {
- "substance": {
- "uuid": "XLSX-aa7e2fd6-c054-35ed-a9d9-1f40c1d179a3"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "138",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "138",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "NRK-52E",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 27626.677
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 155892.087
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 5130.616
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-4be76f8a-a3f8-4a4e-99f1-6b0cb81cd1e5.json b/test/data/enm/study-XLSX-4be76f8a-a3f8-4a4e-99f1-6b0cb81cd1e5.json
deleted file mode 100644
index 0ce0f8c..0000000
--- a/test/data/enm/study-XLSX-4be76f8a-a3f8-4a4e-99f1-6b0cb81cd1e5.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-4be76f8a-a3f8-4a4e-99f1-6b0cb81cd1e5",
- "owner": {
- "substance": {
- "uuid": "XLSX-5e44448d-216f-3b91-891a-a7e1de030a13"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "186",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "186",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": -43.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-4ce6ad29-3317-407c-8c7b-62a0701762c2.json b/test/data/enm/study-XLSX-4ce6ad29-3317-407c-8c7b-62a0701762c2.json
deleted file mode 100644
index cc75144..0000000
--- a/test/data/enm/study-XLSX-4ce6ad29-3317-407c-8c7b-62a0701762c2.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-4ce6ad29-3317-407c-8c7b-62a0701762c2",
- "owner": {
- "substance": {
- "uuid": "XLSX-5efaa24e-6eb5-3f1f-a9f4-680bc92364d6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "123",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "123",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Stirring"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 17
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 17
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 41.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-4cead62b-dda7-4f5f-945f-ceb75c9a2eda.json b/test/data/enm/study-XLSX-4cead62b-dda7-4f5f-945f-ceb75c9a2eda.json
deleted file mode 100644
index b13e150..0000000
--- a/test/data/enm/study-XLSX-4cead62b-dda7-4f5f-945f-ceb75c9a2eda.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-4cead62b-dda7-4f5f-945f-ceb75c9a2eda",
- "owner": {
- "substance": {
- "uuid": "XLSX-36cbb933-ec3a-3d8b-b80f-0d5b6e76edc5"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "028",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "028",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "sphere"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-4dd12e6c-c554-44e6-8428-732407473c6b.json b/test/data/enm/study-XLSX-4dd12e6c-c554-44e6-8428-732407473c6b.json
deleted file mode 100644
index b818f44..0000000
--- a/test/data/enm/study-XLSX-4dd12e6c-c554-44e6-8428-732407473c6b.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-4dd12e6c-c554-44e6-8428-732407473c6b",
- "owner": {
- "substance": {
- "uuid": "XLSX-6fac9681-a5c7-337c-9e35-87c04579f0e6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "083",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "083",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": -30
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-4de28065-48d6-4388-82dd-ea35142f27f2.json b/test/data/enm/study-XLSX-4de28065-48d6-4388-82dd-ea35142f27f2.json
deleted file mode 100644
index 4171b79..0000000
--- a/test/data/enm/study-XLSX-4de28065-48d6-4388-82dd-ea35142f27f2.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-4de28065-48d6-4388-82dd-ea35142f27f2",
- "owner": {
- "substance": {
- "uuid": "XLSX-00cd0ac9-9adc-38a5-9520-89ddd591f75f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "192",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "192",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "polyhedral with irregular morphology"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-4e10f71e-e821-4cb6-9cb1-ffa7d05a9294.json b/test/data/enm/study-XLSX-4e10f71e-e821-4cb6-9cb1-ffa7d05a9294.json
deleted file mode 100644
index a005073..0000000
--- a/test/data/enm/study-XLSX-4e10f71e-e821-4cb6-9cb1-ffa7d05a9294.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-4e10f71e-e821-4cb6-9cb1-ffa7d05a9294",
- "owner": {
- "substance": {
- "uuid": "XLSX-5efaa24e-6eb5-3f1f-a9f4-680bc92364d6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "122",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "122",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NRK-52E",
- "Dispersion protocol": "Stirring",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 7.983
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 16.998
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.361
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-4fad36a5-e05a-4e18-9e4d-9dd542742970.json b/test/data/enm/study-XLSX-4fad36a5-e05a-4e18-9e4d-9dd542742970.json
deleted file mode 100644
index a9baf58..0000000
--- a/test/data/enm/study-XLSX-4fad36a5-e05a-4e18-9e4d-9dd542742970.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-4fad36a5-e05a-4e18-9e4d-9dd542742970",
- "owner": {
- "substance": {
- "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "074",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "074",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "U-87 MG",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 90.3
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 295.564
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 8.211
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-502d510d-75f3-4178-ad7b-66d35eca34fc.json b/test/data/enm/study-XLSX-502d510d-75f3-4178-ad7b-66d35eca34fc.json
deleted file mode 100644
index eb5058f..0000000
--- a/test/data/enm/study-XLSX-502d510d-75f3-4178-ad7b-66d35eca34fc.json
+++ /dev/null
@@ -1,696 +0,0 @@
-{
- "uuid": "XLSX-502d510d-75f3-4178-ad7b-66d35eca34fc",
- "owner": {
- "substance": {
- "uuid": "XLSX-fa48e134-54cf-3417-a63a-6f744191cec2"
- },
- "company": {
- "uuid": "XLSX-4bb81f08-059d-32ad-b5fd-71c6bcc6e0db",
- "name": "FP7 MARINA"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1371/journal.pone.0127174",
- "year": "2015",
- "owner": "P32 - KI"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002993_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002993",
- "title": "BAO_0002993 Cytotoxicity Assay"
- },
- "endpoint": "",
- "guideline": [
- "ELISA / TNF-α release in culture medium"
- ]
- },
- "parameters": {
- "CHMO:0002774": "Y",
- "CLO_0000031": "HMDM (primary cells)",
- "CLO_0000031 EFO_0004443": "ATCC",
- "Cell culture conditions - Serum": "FBS (Gibco/413105K) ",
- "Cell culture conditions - Serum concentration in growth medium": 0.1,
- "Cell culture conditions - Serum concentration in treatment medium": 0.1,
- "Cell line/Type - Full name": "human monocyte-derived macrophages (HMDM)",
- "Dispersion agent": "water with 0,05% BSA",
- "NPO_1952": "N",
- "NPO_1961": "N",
- "NPO_1969 OBI_0000272": "NANOGENOTOX Dispersion protocol (http://www.nanogenotox.eu/files/PDF/web%20nanogenotox%20dispersion%20protocol.pdf) ",
- "OBI_0001911 BAO_0000114": "RPMI (Sigma, RNBB2729 "
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 19.209
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 49.533
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 53.391
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 50.428
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 28.303
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 16.896
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 7.728
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 6.272
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 17.204
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 33.116
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 41.917
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 50.258
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 40.343
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 20.83
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 9.504
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 5.553
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 4.515
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 8.867
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 13.772
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 29.028
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 15.238
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 5.522
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 4.2
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 4.228
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 16.168
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 26.755
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 30.424
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 61.664
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 62.196
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 14.767
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 7.709
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 7.886
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-503e5833-d2b4-49c6-9f7e-beb12dffa851.json b/test/data/enm/study-XLSX-503e5833-d2b4-49c6-9f7e-beb12dffa851.json
deleted file mode 100644
index f01ab55..0000000
--- a/test/data/enm/study-XLSX-503e5833-d2b4-49c6-9f7e-beb12dffa851.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-503e5833-d2b4-49c6-9f7e-beb12dffa851",
- "owner": {
- "substance": {
- "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "065",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "065",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "SK-OV-3",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 1,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 48.037
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 145.919
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 3.915
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-505f7983-f6cc-4965-b267-6bf2ebf5d4ac.json b/test/data/enm/study-XLSX-505f7983-f6cc-4965-b267-6bf2ebf5d4ac.json
deleted file mode 100644
index f506788..0000000
--- a/test/data/enm/study-XLSX-505f7983-f6cc-4965-b267-6bf2ebf5d4ac.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-505f7983-f6cc-4965-b267-6bf2ebf5d4ac",
- "owner": {
- "substance": {
- "uuid": "XLSX-a44564c5-1458-3e3b-aca7-d63f5221d2a8"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "181",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "181",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 8.755
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 14.497
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.23
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-52342ee4-a212-41f4-919b-4b2657948373.json b/test/data/enm/study-XLSX-52342ee4-a212-41f4-919b-4b2657948373.json
deleted file mode 100644
index 37b93ad..0000000
--- a/test/data/enm/study-XLSX-52342ee4-a212-41f4-919b-4b2657948373.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-52342ee4-a212-41f4-919b-4b2657948373",
- "owner": {
- "substance": {
- "uuid": "XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "057",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "057",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "SK-OV-3",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 72,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4.761
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 10.851
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.244
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-53055f0e-f399-401f-8e00-752d041dc2ad.json b/test/data/enm/study-XLSX-53055f0e-f399-401f-8e00-752d041dc2ad.json
deleted file mode 100644
index 076c98e..0000000
--- a/test/data/enm/study-XLSX-53055f0e-f399-401f-8e00-752d041dc2ad.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-53055f0e-f399-401f-8e00-752d041dc2ad",
- "owner": {
- "substance": {
- "uuid": "XLSX-0d71a921-0e8d-3f25-8deb-20478b7e884b"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "127",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "127",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Stirring"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 100
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 100
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 124
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-53347e92-6eda-4e2b-be15-4210fb3bec01.json b/test/data/enm/study-XLSX-53347e92-6eda-4e2b-be15-4210fb3bec01.json
deleted file mode 100644
index ac99544..0000000
--- a/test/data/enm/study-XLSX-53347e92-6eda-4e2b-be15-4210fb3bec01.json
+++ /dev/null
@@ -1,696 +0,0 @@
-{
- "uuid": "XLSX-53347e92-6eda-4e2b-be15-4210fb3bec01",
- "owner": {
- "substance": {
- "uuid": "XLSX-7011cea0-1011-3f8b-9e8a-b3289fed836a"
- },
- "company": {
- "uuid": "XLSX-4bb81f08-059d-32ad-b5fd-71c6bcc6e0db",
- "name": "FP7 MARINA"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1371/journal.pone.0127174",
- "year": "2015",
- "owner": "P32 - KI"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002993_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002993",
- "title": "BAO_0002993 Cytotoxicity Assay"
- },
- "endpoint": "",
- "guideline": [
- "ELISA / TNF-α release in culture medium"
- ]
- },
- "parameters": {
- "CHMO:0002774": "Y",
- "CLO_0000031": "HMDM (primary cells)",
- "CLO_0000031 EFO_0004443": "ATCC",
- "Cell culture conditions - Serum": "FBS (Gibco/413105K) ",
- "Cell culture conditions - Serum concentration in growth medium": 0.1,
- "Cell culture conditions - Serum concentration in treatment medium": 0.1,
- "Cell line/Type - Full name": "human monocyte-derived macrophages (HMDM)",
- "Dispersion agent": "water with 0,05% BSA",
- "NPO_1952": "N",
- "NPO_1961": "N",
- "NPO_1969 OBI_0000272": "NANOGENOTOX Dispersion protocol (http://www.nanogenotox.eu/files/PDF/web%20nanogenotox%20dispersion%20protocol.pdf) ",
- "OBI_0001911 BAO_0000114": "RPMI (Sigma, RNBB2729 "
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 1.893
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 19.698
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 18.521
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 18.028
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 18.415
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 19.297
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 20.887
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 22.696
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": -0.343
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 5.989
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 5.77
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 5.301
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 5.16
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 5.229
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 6.156
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 7.281
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 2.189
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 2.474
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 2.002
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 1.786
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 1.57
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 1.735
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 1.29
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 1.206
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 9.502
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 8.808
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 8.957
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 8.306
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 8.244
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 9.507
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 14.416
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 15.438
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-53a8f685-15f3-401d-bfd8-04ba11b01caf.json b/test/data/enm/study-XLSX-53a8f685-15f3-401d-bfd8-04ba11b01caf.json
deleted file mode 100644
index eef99af..0000000
--- a/test/data/enm/study-XLSX-53a8f685-15f3-401d-bfd8-04ba11b01caf.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-53a8f685-15f3-401d-bfd8-04ba11b01caf",
- "owner": {
- "substance": {
- "uuid": "XLSX-f1b0af03-df66-3849-93cc-4ca706c0f751"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "163",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "163",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "NRK-52E",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 23.412
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 25.849
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.097
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-54374c80-9b0b-422b-b7d6-1b88ff2559d7.json b/test/data/enm/study-XLSX-54374c80-9b0b-422b-b7d6-1b88ff2559d7.json
deleted file mode 100644
index 657cf6f..0000000
--- a/test/data/enm/study-XLSX-54374c80-9b0b-422b-b7d6-1b88ff2559d7.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-54374c80-9b0b-422b-b7d6-1b88ff2559d7",
- "owner": {
- "substance": {
- "uuid": "XLSX-95020ff3-17ee-3889-8a9f-f2555dc4a930"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "004",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "004",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Bath"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 6.4
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 6.4
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 18
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-565b07e5-e902-4963-874c-29d6481bc951.json b/test/data/enm/study-XLSX-565b07e5-e902-4963-874c-29d6481bc951.json
deleted file mode 100644
index c2e0863..0000000
--- a/test/data/enm/study-XLSX-565b07e5-e902-4963-874c-29d6481bc951.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-565b07e5-e902-4963-874c-29d6481bc951",
- "owner": {
- "substance": {
- "uuid": "XLSX-75ca4d9f-546f-3d7d-a24e-d0d54809cbb3"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "039",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "039",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 225
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-5660a7b2-635d-448e-9ed0-9a27c74b8a35.json b/test/data/enm/study-XLSX-5660a7b2-635d-448e-9ed0-9a27c74b8a35.json
deleted file mode 100644
index 2d42cf7..0000000
--- a/test/data/enm/study-XLSX-5660a7b2-635d-448e-9ed0-9a27c74b8a35.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-5660a7b2-635d-448e-9ed0-9a27c74b8a35",
- "owner": {
- "substance": {
- "uuid": "XLSX-0bfa2e41-c6b6-3cbf-8a1e-73bf006768ab"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "026",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "026",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1499.586
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1890.503
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 15.637
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-57070dcb-b8f4-417c-bd32-821515cb654b.json b/test/data/enm/study-XLSX-57070dcb-b8f4-417c-bd32-821515cb654b.json
deleted file mode 100644
index dd328c1..0000000
--- a/test/data/enm/study-XLSX-57070dcb-b8f4-417c-bd32-821515cb654b.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-57070dcb-b8f4-417c-bd32-821515cb654b",
- "owner": {
- "substance": {
- "uuid": "XLSX-3dac4f9c-8c47-3085-9781-e70583adb12f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "167",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "167",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Vortexing"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 106
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 178
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 313
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-5735a27c-52fb-4fca-bd17-13780345dcf5.json b/test/data/enm/study-XLSX-5735a27c-52fb-4fca-bd17-13780345dcf5.json
deleted file mode 100644
index ebc5d9a..0000000
--- a/test/data/enm/study-XLSX-5735a27c-52fb-4fca-bd17-13780345dcf5.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-5735a27c-52fb-4fca-bd17-13780345dcf5",
- "owner": {
- "substance": {
- "uuid": "XLSX-f1b0af03-df66-3849-93cc-4ca706c0f751"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "166",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "166",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": 24.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-5897d5fa-1a6b-4b73-9c96-702bcfce3fb5.json b/test/data/enm/study-XLSX-5897d5fa-1a6b-4b73-9c96-702bcfce3fb5.json
deleted file mode 100644
index 1684b84..0000000
--- a/test/data/enm/study-XLSX-5897d5fa-1a6b-4b73-9c96-702bcfce3fb5.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-5897d5fa-1a6b-4b73-9c96-702bcfce3fb5",
- "owner": {
- "substance": {
- "uuid": "XLSX-bbff7bfc-273b-3dfb-be71-5afb33113e53"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "022",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "022",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": -35.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-59f17980-2a41-4525-a518-68576d2ebba8.json b/test/data/enm/study-XLSX-59f17980-2a41-4525-a518-68576d2ebba8.json
deleted file mode 100644
index 2889d60..0000000
--- a/test/data/enm/study-XLSX-59f17980-2a41-4525-a518-68576d2ebba8.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-59f17980-2a41-4525-a518-68576d2ebba8",
- "owner": {
- "substance": {
- "uuid": "XLSX-12620892-23e5-37f4-9644-a82c4240d695"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "150",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "150",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": 40
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-5ce7f13f-0535-4b46-bf94-28c7566e42e6.json b/test/data/enm/study-XLSX-5ce7f13f-0535-4b46-bf94-28c7566e42e6.json
deleted file mode 100644
index 6917546..0000000
--- a/test/data/enm/study-XLSX-5ce7f13f-0535-4b46-bf94-28c7566e42e6.json
+++ /dev/null
@@ -1,1016 +0,0 @@
-{
- "uuid": "XLSX-5ce7f13f-0535-4b46-bf94-28c7566e42e6",
- "owner": {
- "substance": {
- "uuid": "XLSX-93b2da85-fc0c-315f-8d3b-77f1a7776fb4"
- },
- "company": {
- "uuid": "XLSX-4bb81f08-059d-32ad-b5fd-71c6bcc6e0db",
- "name": "FP7 MARINA"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1371/journal.pone.0127174",
- "year": "2015",
- "owner": "P32 - KI"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "Cell viability - cell membrane damage: Lactate dehydrogenase assay (LDH) (CytoTox 96® Non-radioactive cytotoxicity assay - Promega, G1780) ",
- "guideline": [
- "Cytotoxicity using human monocyte-derived macrophages (HMDM)"
- ]
- },
- "parameters": {
- "CHMO:0002774": "N",
- "CLO_0000031": "HMDM",
- "CLO_0000031 EFO_0004443": "Karolinska University Hospital, Stockholm, Sweden - buffy coats from healthy adult blood donors ",
- "Cell culture conditions - Serum": "FBS (Gibco, 10500) ",
- "Cell culture conditions - Serum concentration in growth medium": 0.1,
- "Cell culture conditions - Serum concentration in treatment medium": "0,05%",
- "Cell line/Type - Full name": "Primary human monocyte-derived macrophages (HMDM)",
- "Dispersion agent": "water with 0,05% BSA",
- "NPO_1952": "Y",
- "NPO_1961": "Y",
- "NPO_1969 OBI_0000272": "NANOGENOTOX Dispersion protocol (http://www.nanogenotox.eu/files/PDF/web%20nanogenotox%20dispersion%20protocol.pdf) ",
- "OBI_0001911 BAO_0000114": "RPMI (Sigma, R0833)"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 99.413
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 99.916
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 99.495
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 98.373
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 97.147
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 93.705
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 82.427
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 99.36
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 99.216
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 96.477
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 96.174
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 94.889
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 93.054
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 77.011
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 93.623
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 97.956
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 96.911
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 75.319
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 66.08
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 41.821
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 39.382
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 89.377
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 86.56
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 89.038
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 82.868
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 70.673
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 55.286
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 36.018
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 92.006
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 86.708
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 87.863
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 90.631
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 81.019
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 70.953
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 54.229
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 116.133
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 127.122
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 105.346
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 97.885
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 93.242
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 81.871
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 57.012
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-5e5f1183-8673-45fc-b1f8-b3eef5c3ae41.json b/test/data/enm/study-XLSX-5e5f1183-8673-45fc-b1f8-b3eef5c3ae41.json
deleted file mode 100644
index 1dd6cc7..0000000
--- a/test/data/enm/study-XLSX-5e5f1183-8673-45fc-b1f8-b3eef5c3ae41.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-5e5f1183-8673-45fc-b1f8-b3eef5c3ae41",
- "owner": {
- "substance": {
- "uuid": "XLSX-d3a9ce39-6c15-3e4b-a5ce-5ea23e45ff16"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "109",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "109",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1131.253
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1500.58
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 14.773
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-5efbcc9b-2430-4305-8a3f-22c756586239.json b/test/data/enm/study-XLSX-5efbcc9b-2430-4305-8a3f-22c756586239.json
deleted file mode 100644
index 461fbc1..0000000
--- a/test/data/enm/study-XLSX-5efbcc9b-2430-4305-8a3f-22c756586239.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-5efbcc9b-2430-4305-8a3f-22c756586239",
- "owner": {
- "substance": {
- "uuid": "XLSX-aa7e2fd6-c054-35ed-a9d9-1f40c1d179a3"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "140",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "140",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 159.876
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 198.592
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.549
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-5f34f263-01ba-4dbe-b0bf-356befcf741b.json b/test/data/enm/study-XLSX-5f34f263-01ba-4dbe-b0bf-356befcf741b.json
deleted file mode 100644
index f70e4dd..0000000
--- a/test/data/enm/study-XLSX-5f34f263-01ba-4dbe-b0bf-356befcf741b.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-5f34f263-01ba-4dbe-b0bf-356befcf741b",
- "owner": {
- "substance": {
- "uuid": "XLSX-f94651ce-fd32-3306-8f89-32ffdf533be9"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "160",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "160",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "espherical"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-60feab4f-a313-40a1-b8a5-12f369010954.json b/test/data/enm/study-XLSX-60feab4f-a313-40a1-b8a5-12f369010954.json
deleted file mode 100644
index 2ccf5fd..0000000
--- a/test/data/enm/study-XLSX-60feab4f-a313-40a1-b8a5-12f369010954.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-60feab4f-a313-40a1-b8a5-12f369010954",
- "owner": {
- "substance": {
- "uuid": "XLSX-00cd0ac9-9adc-38a5-9520-89ddd591f75f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "191",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "191",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1149.611
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 35572.569
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1376.918
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-6132171d-adcc-40b1-b878-f7348210ef70.json b/test/data/enm/study-XLSX-6132171d-adcc-40b1-b878-f7348210ef70.json
deleted file mode 100644
index 434f9ea..0000000
--- a/test/data/enm/study-XLSX-6132171d-adcc-40b1-b878-f7348210ef70.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-6132171d-adcc-40b1-b878-f7348210ef70",
- "owner": {
- "substance": {
- "uuid": "XLSX-5efaa24e-6eb5-3f1f-a9f4-680bc92364d6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "123",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "123",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": -28.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-616c0fe1-a78c-4bfe-b7ef-ddd944bcade6.json b/test/data/enm/study-XLSX-616c0fe1-a78c-4bfe-b7ef-ddd944bcade6.json
deleted file mode 100644
index 7f7bf81..0000000
--- a/test/data/enm/study-XLSX-616c0fe1-a78c-4bfe-b7ef-ddd944bcade6.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-616c0fe1-a78c-4bfe-b7ef-ddd944bcade6",
- "owner": {
- "substance": {
- "uuid": "XLSX-f1b0af03-df66-3849-93cc-4ca706c0f751"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "162",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "162",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 25.938
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 41.782
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.634
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-62124f01-b636-4790-9fdf-2853ee2d0994.json b/test/data/enm/study-XLSX-62124f01-b636-4790-9fdf-2853ee2d0994.json
deleted file mode 100644
index 3bcc805..0000000
--- a/test/data/enm/study-XLSX-62124f01-b636-4790-9fdf-2853ee2d0994.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-62124f01-b636-4790-9fdf-2853ee2d0994",
- "owner": {
- "substance": {
- "uuid": "XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "058",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "058",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "U-87 MG",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": "0,5",
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 12.671
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 42.703
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.201
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-643341e8-2f22-493d-9800-e380396d8836.json b/test/data/enm/study-XLSX-643341e8-2f22-493d-9800-e380396d8836.json
deleted file mode 100644
index 546774d..0000000
--- a/test/data/enm/study-XLSX-643341e8-2f22-493d-9800-e380396d8836.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-643341e8-2f22-493d-9800-e380396d8836",
- "owner": {
- "substance": {
- "uuid": "XLSX-36cbb933-ec3a-3d8b-b80f-0d5b6e76edc5"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "028",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "028",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 15.037
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 201.875
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 7.473
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-6510c098-2038-48d8-8484-9594fb095335.json b/test/data/enm/study-XLSX-6510c098-2038-48d8-8484-9594fb095335.json
deleted file mode 100644
index bdc1cbf..0000000
--- a/test/data/enm/study-XLSX-6510c098-2038-48d8-8484-9594fb095335.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-6510c098-2038-48d8-8484-9594fb095335",
- "owner": {
- "substance": {
- "uuid": "XLSX-a1b25bf2-6046-3c16-ba1c-3efb11b5a4d6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "156",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "156",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Vortexing"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 10
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 10
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 1022
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-658edc2a-ded0-4b88-b80f-638b0d726812.json b/test/data/enm/study-XLSX-658edc2a-ded0-4b88-b80f-638b0d726812.json
deleted file mode 100644
index 8e50be6..0000000
--- a/test/data/enm/study-XLSX-658edc2a-ded0-4b88-b80f-638b0d726812.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "XLSX-658edc2a-ded0-4b88-b80f-638b0d726812",
- "owner": {
- "substance": {
- "uuid": "XLSX-4ceef1bf-5f19-34e7-9d3d-51d65be297d7"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "176",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "176",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2/g",
- "loQualifier": ">=",
- "loValue": 14.5,
- "upQualifier": "<=",
- "upValue": 15.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-668c62b3-24b5-4da1-a9dd-cf30be74ebcd.json b/test/data/enm/study-XLSX-668c62b3-24b5-4da1-a9dd-cf30be74ebcd.json
deleted file mode 100644
index 2b09c49..0000000
--- a/test/data/enm/study-XLSX-668c62b3-24b5-4da1-a9dd-cf30be74ebcd.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-668c62b3-24b5-4da1-a9dd-cf30be74ebcd",
- "owner": {
- "substance": {
- "uuid": "XLSX-673c8355-a823-3bf2-a319-0d8af43e4d90"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "149",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "149",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2/g",
- "loValue": 56.261
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-674ea779-2d07-44be-b7ba-0f9c39560ceb.json b/test/data/enm/study-XLSX-674ea779-2d07-44be-b7ba-0f9c39560ceb.json
deleted file mode 100644
index 398476e..0000000
--- a/test/data/enm/study-XLSX-674ea779-2d07-44be-b7ba-0f9c39560ceb.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-674ea779-2d07-44be-b7ba-0f9c39560ceb",
- "owner": {
- "substance": {
- "uuid": "XLSX-673c8355-a823-3bf2-a319-0d8af43e4d90"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "149",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "149",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "elongated and rounded"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-677e4c55-92dd-4f7f-a8fe-230680fed7a3.json b/test/data/enm/study-XLSX-677e4c55-92dd-4f7f-a8fe-230680fed7a3.json
deleted file mode 100644
index 0aa841b..0000000
--- a/test/data/enm/study-XLSX-677e4c55-92dd-4f7f-a8fe-230680fed7a3.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-677e4c55-92dd-4f7f-a8fe-230680fed7a3",
- "owner": {
- "substance": {
- "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "066",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "066",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "SK-OV-3",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 2,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 52.673
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 157.987
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4.213
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-679926f6-20b1-4c5c-a3d7-3479daaa05e3.json b/test/data/enm/study-XLSX-679926f6-20b1-4c5c-a3d7-3479daaa05e3.json
deleted file mode 100644
index c984967..0000000
--- a/test/data/enm/study-XLSX-679926f6-20b1-4c5c-a3d7-3479daaa05e3.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-679926f6-20b1-4c5c-a3d7-3479daaa05e3",
- "owner": {
- "substance": {
- "uuid": "XLSX-de76fc02-ef1f-310a-b61f-6aab5b586412"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "119",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "119",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "angular"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-68740430-324b-43d5-a2ee-75c5cd8bc5d9.json b/test/data/enm/study-XLSX-68740430-324b-43d5-a2ee-75c5cd8bc5d9.json
deleted file mode 100644
index 3ae75f5..0000000
--- a/test/data/enm/study-XLSX-68740430-324b-43d5-a2ee-75c5cd8bc5d9.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-68740430-324b-43d5-a2ee-75c5cd8bc5d9",
- "owner": {
- "substance": {
- "uuid": "XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "062",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "062",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "U-87 MG",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4.761
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 15.33
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.423
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-6984e52f-8789-4364-b88f-77ad879365cc.json b/test/data/enm/study-XLSX-6984e52f-8789-4364-b88f-77ad879365cc.json
deleted file mode 100644
index 1ba2672..0000000
--- a/test/data/enm/study-XLSX-6984e52f-8789-4364-b88f-77ad879365cc.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-6984e52f-8789-4364-b88f-77ad879365cc",
- "owner": {
- "substance": {
- "uuid": "XLSX-9f84408a-4414-33c9-a0f2-53bd19cf2d65"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "155",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "155",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": 35
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-69b01885-593c-44d8-8ca1-9ca34d9429df.json b/test/data/enm/study-XLSX-69b01885-593c-44d8-8ca1-9ca34d9429df.json
deleted file mode 100644
index 47e83a9..0000000
--- a/test/data/enm/study-XLSX-69b01885-593c-44d8-8ca1-9ca34d9429df.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-69b01885-593c-44d8-8ca1-9ca34d9429df",
- "owner": {
- "substance": {
- "uuid": "XLSX-9eb0db98-07c0-37fb-9fc3-7126d72252c4"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "131",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "131",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Stirring"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 60
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 60
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 68.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-69dde5ab-16e5-40e1-81ed-b0ddbff8984d.json b/test/data/enm/study-XLSX-69dde5ab-16e5-40e1-81ed-b0ddbff8984d.json
deleted file mode 100644
index bfa56af..0000000
--- a/test/data/enm/study-XLSX-69dde5ab-16e5-40e1-81ed-b0ddbff8984d.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-69dde5ab-16e5-40e1-81ed-b0ddbff8984d",
- "owner": {
- "substance": {
- "uuid": "XLSX-ce148a7f-3da2-3fb8-9245-161eb6747522"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "179",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "179",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Bath"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 101
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 170
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 180
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-6a0eafba-58d6-4e8f-818e-dcb7924441b8.json b/test/data/enm/study-XLSX-6a0eafba-58d6-4e8f-818e-dcb7924441b8.json
deleted file mode 100644
index 2ab19b8..0000000
--- a/test/data/enm/study-XLSX-6a0eafba-58d6-4e8f-818e-dcb7924441b8.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-6a0eafba-58d6-4e8f-818e-dcb7924441b8",
- "owner": {
- "substance": {
- "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "064",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "064",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "SK-OV-3",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": "0,5",
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 30.547
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 95.681
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2.605
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-6a7bfd1c-0eb9-4164-b3fd-a0d14afb7030.json b/test/data/enm/study-XLSX-6a7bfd1c-0eb9-4164-b3fd-a0d14afb7030.json
deleted file mode 100644
index 30db8b1..0000000
--- a/test/data/enm/study-XLSX-6a7bfd1c-0eb9-4164-b3fd-a0d14afb7030.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-6a7bfd1c-0eb9-4164-b3fd-a0d14afb7030",
- "owner": {
- "substance": {
- "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "068",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "068",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "SK-OV-3",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 68.308
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 232.231
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 6.557
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-6aa092f0-7bd2-451f-9519-76783e191a44.json b/test/data/enm/study-XLSX-6aa092f0-7bd2-451f-9519-76783e191a44.json
deleted file mode 100644
index 8bfbd41..0000000
--- a/test/data/enm/study-XLSX-6aa092f0-7bd2-451f-9519-76783e191a44.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-6aa092f0-7bd2-451f-9519-76783e191a44",
- "owner": {
- "substance": {
- "uuid": "XLSX-c42f434e-6295-3715-8a23-ce26f87642a6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "188",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "188",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "near spherical rather than polyhedral with regular morphology"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-6b80cb8a-3c4e-47fc-9576-80bea2692acf.json b/test/data/enm/study-XLSX-6b80cb8a-3c4e-47fc-9576-80bea2692acf.json
deleted file mode 100644
index b05ccd0..0000000
--- a/test/data/enm/study-XLSX-6b80cb8a-3c4e-47fc-9576-80bea2692acf.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-6b80cb8a-3c4e-47fc-9576-80bea2692acf",
- "owner": {
- "substance": {
- "uuid": "XLSX-3ff81e94-3d5d-3e58-a761-b0bd7c94de3b"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "107",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "107",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "round/oblong"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-6bd1e6fa-d769-4f6e-9ce5-56449b76b157.json b/test/data/enm/study-XLSX-6bd1e6fa-d769-4f6e-9ce5-56449b76b157.json
deleted file mode 100644
index 94d84f3..0000000
--- a/test/data/enm/study-XLSX-6bd1e6fa-d769-4f6e-9ce5-56449b76b157.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-6bd1e6fa-d769-4f6e-9ce5-56449b76b157",
- "owner": {
- "substance": {
- "uuid": "XLSX-2aef353b-440f-32a7-8447-1974997a69a8"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "189",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "189",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 76.65
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 19961.993
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 795.414
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-6beceb2a-be58-434a-b0d8-486c7e52097d.json b/test/data/enm/study-XLSX-6beceb2a-be58-434a-b0d8-486c7e52097d.json
deleted file mode 100644
index 4c9f9cd..0000000
--- a/test/data/enm/study-XLSX-6beceb2a-be58-434a-b0d8-486c7e52097d.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-6beceb2a-be58-434a-b0d8-486c7e52097d",
- "owner": {
- "substance": {
- "uuid": "XLSX-2acfa382-5109-3e49-9fd4-ef8d139be4b2"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "100",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "100",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "16HBE",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 66.831
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 93.873
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.082
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-7003b00b-fc9c-4b77-84fa-3575208046b5.json b/test/data/enm/study-XLSX-7003b00b-fc9c-4b77-84fa-3575208046b5.json
deleted file mode 100644
index 94acafe..0000000
--- a/test/data/enm/study-XLSX-7003b00b-fc9c-4b77-84fa-3575208046b5.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-7003b00b-fc9c-4b77-84fa-3575208046b5",
- "owner": {
- "substance": {
- "uuid": "XLSX-d3a9ce39-6c15-3e4b-a5ce-5ea23e45ff16"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "113",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "113",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 160.324
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 618.789
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 18.339
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-70cad8bd-b879-4f35-87c8-368efdc5d417.json b/test/data/enm/study-XLSX-70cad8bd-b879-4f35-87c8-368efdc5d417.json
deleted file mode 100644
index 5302e1b..0000000
--- a/test/data/enm/study-XLSX-70cad8bd-b879-4f35-87c8-368efdc5d417.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-70cad8bd-b879-4f35-87c8-368efdc5d417",
- "owner": {
- "substance": {
- "uuid": "XLSX-00cd0ac9-9adc-38a5-9520-89ddd591f75f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "192",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "192",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 503.935
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1665.946
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 46.48
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-71afa2e5-14de-4df7-9c4e-21cae4d1cee2.json b/test/data/enm/study-XLSX-71afa2e5-14de-4df7-9c4e-21cae4d1cee2.json
deleted file mode 100644
index fd7946b..0000000
--- a/test/data/enm/study-XLSX-71afa2e5-14de-4df7-9c4e-21cae4d1cee2.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "XLSX-71afa2e5-14de-4df7-9c4e-21cae4d1cee2",
- "owner": {
- "substance": {
- "uuid": "XLSX-12620892-23e5-37f4-9644-a82c4240d695"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "150",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "150",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Bath"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 21.8
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 41.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-74ccfe84-b7af-4a86-bc71-95bf65506336.json b/test/data/enm/study-XLSX-74ccfe84-b7af-4a86-bc71-95bf65506336.json
deleted file mode 100644
index 2372328..0000000
--- a/test/data/enm/study-XLSX-74ccfe84-b7af-4a86-bc71-95bf65506336.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-74ccfe84-b7af-4a86-bc71-95bf65506336",
- "owner": {
- "substance": {
- "uuid": "XLSX-aa7e2fd6-c054-35ed-a9d9-1f40c1d179a3"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "137",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "137",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 674.028
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2905.409
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 89.255
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-75963ed6-0523-4a45-a317-b6269a0d2cfe.json b/test/data/enm/study-XLSX-75963ed6-0523-4a45-a317-b6269a0d2cfe.json
deleted file mode 100644
index 92111f1..0000000
--- a/test/data/enm/study-XLSX-75963ed6-0523-4a45-a317-b6269a0d2cfe.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-75963ed6-0523-4a45-a317-b6269a0d2cfe",
- "owner": {
- "substance": {
- "uuid": "XLSX-f1b0af03-df66-3849-93cc-4ca706c0f751"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "166",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "166",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Bath"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 106
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 178
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 482
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-75b996a0-f468-4f65-999e-59061f3ab8f1.json b/test/data/enm/study-XLSX-75b996a0-f468-4f65-999e-59061f3ab8f1.json
deleted file mode 100644
index 4690293..0000000
--- a/test/data/enm/study-XLSX-75b996a0-f468-4f65-999e-59061f3ab8f1.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-75b996a0-f468-4f65-999e-59061f3ab8f1",
- "owner": {
- "substance": {
- "uuid": "XLSX-5d7807f7-a13b-392f-88af-fe7885a67502"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "169",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1911_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1911",
- "title": "NPO_1911 MTT Assay"
- },
- "endpoint": "169",
- "guideline": [
- "MTT"
- ]
- },
- "parameters": {
- "Cell line": "NIH/3T3",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 144,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.117
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.672
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.022
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-76487895-631e-40f3-88a3-b2741de4d910.json b/test/data/enm/study-XLSX-76487895-631e-40f3-88a3-b2741de4d910.json
deleted file mode 100644
index ebdec4c..0000000
--- a/test/data/enm/study-XLSX-76487895-631e-40f3-88a3-b2741de4d910.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-76487895-631e-40f3-88a3-b2741de4d910",
- "owner": {
- "substance": {
- "uuid": "XLSX-7394378e-b717-3418-a3f7-27db3cbbd8d0"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "035",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "035",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Tip"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 67
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 4048
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 798
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-7677b950-92fc-4190-b1da-9830605be921.json b/test/data/enm/study-XLSX-7677b950-92fc-4190-b1da-9830605be921.json
deleted file mode 100644
index 8500a2f..0000000
--- a/test/data/enm/study-XLSX-7677b950-92fc-4190-b1da-9830605be921.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-7677b950-92fc-4190-b1da-9830605be921",
- "owner": {
- "substance": {
- "uuid": "XLSX-de76fc02-ef1f-310a-b61f-6aab5b586412"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "119",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "119",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": -46.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-7801fc1f-f78e-439b-86d8-605aac5829f9.json b/test/data/enm/study-XLSX-7801fc1f-f78e-439b-86d8-605aac5829f9.json
deleted file mode 100644
index 9fd0a46..0000000
--- a/test/data/enm/study-XLSX-7801fc1f-f78e-439b-86d8-605aac5829f9.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-7801fc1f-f78e-439b-86d8-605aac5829f9",
- "owner": {
- "substance": {
- "uuid": "XLSX-12620892-23e5-37f4-9644-a82c4240d695"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "150",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "150",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "elongated and rounded"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-782237c1-fdd9-4a31-98f2-9cac8437cafa.json b/test/data/enm/study-XLSX-782237c1-fdd9-4a31-98f2-9cac8437cafa.json
deleted file mode 100644
index 45b5093..0000000
--- a/test/data/enm/study-XLSX-782237c1-fdd9-4a31-98f2-9cac8437cafa.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-782237c1-fdd9-4a31-98f2-9cac8437cafa",
- "owner": {
- "substance": {
- "uuid": "XLSX-5d7807f7-a13b-392f-88af-fe7885a67502"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "170",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "170",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "Mainly 2 euhedral morphologies: aspect ratio of 1 (20–250 nm and 400 nm) and 2:7,5 (50-350 nm)"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.68
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-78a5f27b-1b7b-4416-8ff7-b981d833eac7.json b/test/data/enm/study-XLSX-78a5f27b-1b7b-4416-8ff7-b981d833eac7.json
deleted file mode 100644
index 138a032..0000000
--- a/test/data/enm/study-XLSX-78a5f27b-1b7b-4416-8ff7-b981d833eac7.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-78a5f27b-1b7b-4416-8ff7-b981d833eac7",
- "owner": {
- "substance": {
- "uuid": "XLSX-2acfa382-5109-3e49-9fd4-ef8d139be4b2"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "103",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "103",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Vortexing"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 25
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 30
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-7942c6c5-07a2-4d75-8ee1-7994d617ded4.json b/test/data/enm/study-XLSX-7942c6c5-07a2-4d75-8ee1-7994d617ded4.json
deleted file mode 100644
index d88ebee..0000000
--- a/test/data/enm/study-XLSX-7942c6c5-07a2-4d75-8ee1-7994d617ded4.json
+++ /dev/null
@@ -1,57 +0,0 @@
-{
- "uuid": "XLSX-7942c6c5-07a2-4d75-8ee1-7994d617ded4",
- "owner": {
- "substance": {
- "uuid": "XLSX-95020ff3-17ee-3889-8a9f-f2555dc4a930"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "002",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "002",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.0
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-79993424-da62-4832-a593-a3fddf1215dc.json b/test/data/enm/study-XLSX-79993424-da62-4832-a593-a3fddf1215dc.json
deleted file mode 100644
index 92f75ed..0000000
--- a/test/data/enm/study-XLSX-79993424-da62-4832-a593-a3fddf1215dc.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-79993424-da62-4832-a593-a3fddf1215dc",
- "owner": {
- "substance": {
- "uuid": "XLSX-673c8355-a823-3bf2-a319-0d8af43e4d90"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "149",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "149",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": 40
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-7b6bef82-33d5-496b-8a67-98dc25612972.json b/test/data/enm/study-XLSX-7b6bef82-33d5-496b-8a67-98dc25612972.json
deleted file mode 100644
index 9c50bb5..0000000
--- a/test/data/enm/study-XLSX-7b6bef82-33d5-496b-8a67-98dc25612972.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-7b6bef82-33d5-496b-8a67-98dc25612972",
- "owner": {
- "substance": {
- "uuid": "XLSX-d4f2714a-a7f6-305a-af41-18d8129fef13"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "184",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "184",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": 40
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-7b7d74b3-17f0-4d27-b99d-e8f9783c78f9.json b/test/data/enm/study-XLSX-7b7d74b3-17f0-4d27-b99d-e8f9783c78f9.json
deleted file mode 100644
index 9dcaafb..0000000
--- a/test/data/enm/study-XLSX-7b7d74b3-17f0-4d27-b99d-e8f9783c78f9.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-7b7d74b3-17f0-4d27-b99d-e8f9783c78f9",
- "owner": {
- "substance": {
- "uuid": "XLSX-53ac37fa-9e10-3f71-9d74-bc47f28880ff"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "185",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "185",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2/g",
- "loValue": 77.992
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-7da1da69-ac0c-430b-a5de-f15d0c51d1dd.json b/test/data/enm/study-XLSX-7da1da69-ac0c-430b-a5de-f15d0c51d1dd.json
deleted file mode 100644
index e20eb42..0000000
--- a/test/data/enm/study-XLSX-7da1da69-ac0c-430b-a5de-f15d0c51d1dd.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-7da1da69-ac0c-430b-a5de-f15d0c51d1dd",
- "owner": {
- "substance": {
- "uuid": "XLSX-2aef353b-440f-32a7-8447-1974997a69a8"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "190",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "190",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "polyhedral with irregular morphology"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-7de5aa9c-02e2-410a-a1ac-cc5518f2ddd6.json b/test/data/enm/study-XLSX-7de5aa9c-02e2-410a-a1ac-cc5518f2ddd6.json
deleted file mode 100644
index 506d325..0000000
--- a/test/data/enm/study-XLSX-7de5aa9c-02e2-410a-a1ac-cc5518f2ddd6.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-7de5aa9c-02e2-410a-a1ac-cc5518f2ddd6",
- "owner": {
- "substance": {
- "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "070",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "070",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "U-87 MG",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": "0,5",
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 42.557
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 117.994
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 3.017
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-7ee9bf0a-db20-45b9-bb5a-0a162e9fd458.json b/test/data/enm/study-XLSX-7ee9bf0a-db20-45b9-bb5a-0a162e9fd458.json
deleted file mode 100644
index 03a9bbc..0000000
--- a/test/data/enm/study-XLSX-7ee9bf0a-db20-45b9-bb5a-0a162e9fd458.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-7ee9bf0a-db20-45b9-bb5a-0a162e9fd458",
- "owner": {
- "substance": {
- "uuid": "XLSX-f1b0af03-df66-3849-93cc-4ca706c0f751"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "166",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "166",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "Mainly 2 euhedral morphologies: aspect ratio of 1 (20–250 nm and 400 nm) and 2:7,5 (50-350 nm)"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.68
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-7f7f4d4f-6adf-4505-96b8-2b362a3501a9.json b/test/data/enm/study-XLSX-7f7f4d4f-6adf-4505-96b8-2b362a3501a9.json
deleted file mode 100644
index 8540bcf..0000000
--- a/test/data/enm/study-XLSX-7f7f4d4f-6adf-4505-96b8-2b362a3501a9.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-7f7f4d4f-6adf-4505-96b8-2b362a3501a9",
- "owner": {
- "substance": {
- "uuid": "XLSX-1a8410a0-279c-3e82-bdfb-ce96b534df9b"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "020",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "020",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": -38.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-8159e38e-6cd1-48b1-b257-725437255e1b.json b/test/data/enm/study-XLSX-8159e38e-6cd1-48b1-b257-725437255e1b.json
deleted file mode 100644
index 6be1f23..0000000
--- a/test/data/enm/study-XLSX-8159e38e-6cd1-48b1-b257-725437255e1b.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-8159e38e-6cd1-48b1-b257-725437255e1b",
- "owner": {
- "substance": {
- "uuid": "XLSX-38666e26-8f8e-37a4-b97c-728a1e5aa0f2"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "038",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "038",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 27.696
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 915.193
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 35.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-832963bb-ee15-45e0-83de-ed54449e8369.json b/test/data/enm/study-XLSX-832963bb-ee15-45e0-83de-ed54449e8369.json
deleted file mode 100644
index 034989b..0000000
--- a/test/data/enm/study-XLSX-832963bb-ee15-45e0-83de-ed54449e8369.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "XLSX-832963bb-ee15-45e0-83de-ed54449e8369",
- "owner": {
- "substance": {
- "uuid": "XLSX-a0d9ab63-ee03-3224-984a-4bd276e3ea3a"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "143",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "143",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Bath"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 21.45
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 37.6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-83558a80-1c32-49b4-b8e3-2817f2e501bc.json b/test/data/enm/study-XLSX-83558a80-1c32-49b4-b8e3-2817f2e501bc.json
deleted file mode 100644
index d838797..0000000
--- a/test/data/enm/study-XLSX-83558a80-1c32-49b4-b8e3-2817f2e501bc.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-83558a80-1c32-49b4-b8e3-2817f2e501bc",
- "owner": {
- "substance": {
- "uuid": "XLSX-5d07b463-d3a8-35b1-826e-076f9f2328c8"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "081",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "081",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Stirring",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 12.643
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 15.061
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.097
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-83c9e6b3-d952-47e2-8d20-9825a47cca5b.json b/test/data/enm/study-XLSX-83c9e6b3-d952-47e2-8d20-9825a47cca5b.json
deleted file mode 100644
index 5e4084b..0000000
--- a/test/data/enm/study-XLSX-83c9e6b3-d952-47e2-8d20-9825a47cca5b.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-83c9e6b3-d952-47e2-8d20-9825a47cca5b",
- "owner": {
- "substance": {
- "uuid": "XLSX-5e44448d-216f-3b91-891a-a7e1de030a13"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "186",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "186",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "(m2/g)",
- "loValue": 204.11
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-83cde563-ab1f-4f19-a4e7-b197d4f81d60.json b/test/data/enm/study-XLSX-83cde563-ab1f-4f19-a4e7-b197d4f81d60.json
deleted file mode 100644
index 3786575..0000000
--- a/test/data/enm/study-XLSX-83cde563-ab1f-4f19-a4e7-b197d4f81d60.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-83cde563-ab1f-4f19-a4e7-b197d4f81d60",
- "owner": {
- "substance": {
- "uuid": "XLSX-64e97bde-be4b-34fb-b216-85724e66b02a"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "153",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "153",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 61
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-845fe2c2-13a3-4950-8550-39b4d5311ed8.json b/test/data/enm/study-XLSX-845fe2c2-13a3-4950-8550-39b4d5311ed8.json
deleted file mode 100644
index d6c9f02..0000000
--- a/test/data/enm/study-XLSX-845fe2c2-13a3-4950-8550-39b4d5311ed8.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-845fe2c2-13a3-4950-8550-39b4d5311ed8",
- "owner": {
- "substance": {
- "uuid": "XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "056",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "056",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "SK-OV-3",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 9.102
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 19.024
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.397
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-854a676a-8f13-442f-9bd6-51e85f791f54.json b/test/data/enm/study-XLSX-854a676a-8f13-442f-9bd6-51e85f791f54.json
deleted file mode 100644
index dd311e4..0000000
--- a/test/data/enm/study-XLSX-854a676a-8f13-442f-9bd6-51e85f791f54.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-854a676a-8f13-442f-9bd6-51e85f791f54",
- "owner": {
- "substance": {
- "uuid": "XLSX-a44564c5-1458-3e3b-aca7-d63f5221d2a8"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "183",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "183",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": 24.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-8602c5bd-83aa-447e-9adb-cd428a1ba379.json b/test/data/enm/study-XLSX-8602c5bd-83aa-447e-9adb-cd428a1ba379.json
deleted file mode 100644
index 9fe0008..0000000
--- a/test/data/enm/study-XLSX-8602c5bd-83aa-447e-9adb-cd428a1ba379.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-8602c5bd-83aa-447e-9adb-cd428a1ba379",
- "owner": {
- "substance": {
- "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "073",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "073",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "U-87 MG",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 114.194
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 367.101
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 10.116
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-86d86ca0-8bde-47dd-a7cd-9bf67725d4ca.json b/test/data/enm/study-XLSX-86d86ca0-8bde-47dd-a7cd-9bf67725d4ca.json
deleted file mode 100644
index bcedc17..0000000
--- a/test/data/enm/study-XLSX-86d86ca0-8bde-47dd-a7cd-9bf67725d4ca.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-86d86ca0-8bde-47dd-a7cd-9bf67725d4ca",
- "owner": {
- "substance": {
- "uuid": "XLSX-f1b0af03-df66-3849-93cc-4ca706c0f751"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "165",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "165",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 89.631
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 203.615
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4.559
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-8780e971-9a1e-4c96-b7dd-df6906f459c1.json b/test/data/enm/study-XLSX-8780e971-9a1e-4c96-b7dd-df6906f459c1.json
deleted file mode 100644
index aac3386..0000000
--- a/test/data/enm/study-XLSX-8780e971-9a1e-4c96-b7dd-df6906f459c1.json
+++ /dev/null
@@ -1,1016 +0,0 @@
-{
- "uuid": "XLSX-8780e971-9a1e-4c96-b7dd-df6906f459c1",
- "owner": {
- "substance": {
- "uuid": "XLSX-7011cea0-1011-3f8b-9e8a-b3289fed836a"
- },
- "company": {
- "uuid": "XLSX-4bb81f08-059d-32ad-b5fd-71c6bcc6e0db",
- "name": "FP7 MARINA"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1371/journal.pone.0127174",
- "year": "2015",
- "owner": "P32 - KI"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "Cell viability - cell membrane damage: Lactate dehydrogenase assay (LDH) (CytoTox 96® Non-radioactive cytotoxicity assay - Promega, G1780) ",
- "guideline": [
- "Cytotoxicity using human monocyte-derived macrophages (HMDM)"
- ]
- },
- "parameters": {
- "CHMO:0002774": "N",
- "CLO_0000031": "HMDM",
- "CLO_0000031 EFO_0004443": "Karolinska University Hospital, Stockholm, Sweden - buffy coats from healthy adult blood donors ",
- "Cell culture conditions - Serum": "FBS (Gibco, 10500) ",
- "Cell culture conditions - Serum concentration in growth medium": 0.1,
- "Cell culture conditions - Serum concentration in treatment medium": "0,05%",
- "Cell line/Type - Full name": "Primary human monocyte-derived macrophages (HMDM)",
- "Dispersion agent": "water with 0,05% BSA",
- "NPO_1952": "Y",
- "NPO_1961": "Y",
- "NPO_1969 OBI_0000272": "NANOGENOTOX Dispersion protocol (http://www.nanogenotox.eu/files/PDF/web%20nanogenotox%20dispersion%20protocol.pdf) ",
- "OBI_0001911 BAO_0000114": "RPMI (Sigma, R0833)"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 94.294
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 95.395
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 93.312
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 94.568
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 102.257
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 96.158
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 102.301
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 98.551
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 98.341
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 98.816
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 97.54
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100.042
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 98.508
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 94.204
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 91.546
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 94.817
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 93.689
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 95.606
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 98.021
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 95.369
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100.478
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100.029
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 97.715
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 94.152
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 94.331
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 94.293
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 82.224
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 83.231
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 90.843
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 86.566
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 82.579
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 84.673
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 89.69
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 91.093
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 92.472
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 102.679
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 98.516
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 95.758
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 94.941
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 94.554
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 83.131
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 84.513
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-87c24669-daee-4ac4-965e-a572347ed807.json b/test/data/enm/study-XLSX-87c24669-daee-4ac4-965e-a572347ed807.json
deleted file mode 100644
index 07c8395..0000000
--- a/test/data/enm/study-XLSX-87c24669-daee-4ac4-965e-a572347ed807.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-87c24669-daee-4ac4-965e-a572347ed807",
- "owner": {
- "substance": {
- "uuid": "XLSX-f1b0af03-df66-3849-93cc-4ca706c0f751"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "164",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "164",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NRK-52E",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 17.872
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 18.111
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.01
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-880c0005-b5fa-4e6d-8f57-46dfbed10eaf.json b/test/data/enm/study-XLSX-880c0005-b5fa-4e6d-8f57-46dfbed10eaf.json
deleted file mode 100644
index d16750c..0000000
--- a/test/data/enm/study-XLSX-880c0005-b5fa-4e6d-8f57-46dfbed10eaf.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-880c0005-b5fa-4e6d-8f57-46dfbed10eaf",
- "owner": {
- "substance": {
- "uuid": "XLSX-0d71a921-0e8d-3f25-8deb-20478b7e884b"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "125",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "125",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Dispersion protocol": "Stirring",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 772.279
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 3005.732
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 89.338
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-880d9d94-b9be-4703-bf64-b4e72f1f0ba8.json b/test/data/enm/study-XLSX-880d9d94-b9be-4703-bf64-b4e72f1f0ba8.json
deleted file mode 100644
index 9416db6..0000000
--- a/test/data/enm/study-XLSX-880d9d94-b9be-4703-bf64-b4e72f1f0ba8.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "XLSX-880d9d94-b9be-4703-bf64-b4e72f1f0ba8",
- "owner": {
- "substance": {
- "uuid": "XLSX-c42f434e-6295-3715-8a23-ce26f87642a6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "188",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "188",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loQualifier": ">=",
- "loValue": 64,
- "upQualifier": "<=",
- "upValue": 68
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-89e92622-b378-4c27-a247-69e57ddec991.json b/test/data/enm/study-XLSX-89e92622-b378-4c27-a247-69e57ddec991.json
deleted file mode 100644
index 6ab81a2..0000000
--- a/test/data/enm/study-XLSX-89e92622-b378-4c27-a247-69e57ddec991.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-89e92622-b378-4c27-a247-69e57ddec991",
- "owner": {
- "substance": {
- "uuid": "XLSX-58c9f610-0fef-3009-8112-6ea05d863644"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "168",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "168",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Bath"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 106
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 178
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 160
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-8a271daf-f41f-4db8-8e04-e8a5da3184e1.json b/test/data/enm/study-XLSX-8a271daf-f41f-4db8-8e04-e8a5da3184e1.json
deleted file mode 100644
index 804d354..0000000
--- a/test/data/enm/study-XLSX-8a271daf-f41f-4db8-8e04-e8a5da3184e1.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-8a271daf-f41f-4db8-8e04-e8a5da3184e1",
- "owner": {
- "substance": {
- "uuid": "XLSX-190fb54d-9b65-3d58-b65e-b3aae9a1f182"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "154",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "154",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NCI-H292",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 416.937
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 625.221
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 8.331
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-8af9c4ff-0461-4138-b733-8e3b4df15e36.json b/test/data/enm/study-XLSX-8af9c4ff-0461-4138-b733-8e3b4df15e36.json
deleted file mode 100644
index 6eda8f5..0000000
--- a/test/data/enm/study-XLSX-8af9c4ff-0461-4138-b733-8e3b4df15e36.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-8af9c4ff-0461-4138-b733-8e3b4df15e36",
- "owner": {
- "substance": {
- "uuid": "XLSX-4ceef1bf-5f19-34e7-9d3d-51d65be297d7"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "173",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "173",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "NRK-52E",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 13.3
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 42.119
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.153
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-8bfb303d-bf11-40fa-8492-af33b2e6b811.json b/test/data/enm/study-XLSX-8bfb303d-bf11-40fa-8492-af33b2e6b811.json
deleted file mode 100644
index 9a346f6..0000000
--- a/test/data/enm/study-XLSX-8bfb303d-bf11-40fa-8492-af33b2e6b811.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-8bfb303d-bf11-40fa-8492-af33b2e6b811",
- "owner": {
- "substance": {
- "uuid": "XLSX-6fac9681-a5c7-337c-9e35-87c04579f0e6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "083",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "083",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "oblong"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-8c3d195c-d59b-4530-b812-9b3ffcb05fd0.json b/test/data/enm/study-XLSX-8c3d195c-d59b-4530-b812-9b3ffcb05fd0.json
deleted file mode 100644
index 7ae4311..0000000
--- a/test/data/enm/study-XLSX-8c3d195c-d59b-4530-b812-9b3ffcb05fd0.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-8c3d195c-d59b-4530-b812-9b3ffcb05fd0",
- "owner": {
- "substance": {
- "uuid": "XLSX-5a273d77-e518-3523-b377-c06f08182be1"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "021",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "021",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": -43.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-8c62011c-fc3c-4f25-bb5e-80cef1c29bad.json b/test/data/enm/study-XLSX-8c62011c-fc3c-4f25-bb5e-80cef1c29bad.json
deleted file mode 100644
index c85b5ae..0000000
--- a/test/data/enm/study-XLSX-8c62011c-fc3c-4f25-bb5e-80cef1c29bad.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-8c62011c-fc3c-4f25-bb5e-80cef1c29bad",
- "owner": {
- "substance": {
- "uuid": "XLSX-aa7e2fd6-c054-35ed-a9d9-1f40c1d179a3"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "141",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "141",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": 40
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-8c7190f0-de46-4f3c-a435-b4954125d617.json b/test/data/enm/study-XLSX-8c7190f0-de46-4f3c-a435-b4954125d617.json
deleted file mode 100644
index a0c34db..0000000
--- a/test/data/enm/study-XLSX-8c7190f0-de46-4f3c-a435-b4954125d617.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-8c7190f0-de46-4f3c-a435-b4954125d617",
- "owner": {
- "substance": {
- "uuid": "XLSX-aa7e2fd6-c054-35ed-a9d9-1f40c1d179a3"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "141",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "141",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 537.769
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 3361.7
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 112.957
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-8eb34c53-1aa0-4242-bb5f-511b38a05fb0.json b/test/data/enm/study-XLSX-8eb34c53-1aa0-4242-bb5f-511b38a05fb0.json
deleted file mode 100644
index cf95088..0000000
--- a/test/data/enm/study-XLSX-8eb34c53-1aa0-4242-bb5f-511b38a05fb0.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-8eb34c53-1aa0-4242-bb5f-511b38a05fb0",
- "owner": {
- "substance": {
- "uuid": "XLSX-7394378e-b717-3418-a3f7-27db3cbbd8d0"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "035",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "035",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "straight wall"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 66
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-8fd63a5b-02cc-48a8-ab8c-c68bdb992645.json b/test/data/enm/study-XLSX-8fd63a5b-02cc-48a8-ab8c-c68bdb992645.json
deleted file mode 100644
index c9f9cd2..0000000
--- a/test/data/enm/study-XLSX-8fd63a5b-02cc-48a8-ab8c-c68bdb992645.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-8fd63a5b-02cc-48a8-ab8c-c68bdb992645",
- "owner": {
- "substance": {
- "uuid": "XLSX-acb82e6d-63d6-3cf4-a796-a281b1ba835f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "009",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "009",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 44.545
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 154.891
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4.414
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-8fe70465-2da0-47a4-abdd-7aec47df0d4f.json b/test/data/enm/study-XLSX-8fe70465-2da0-47a4-abdd-7aec47df0d4f.json
deleted file mode 100644
index e48c26e..0000000
--- a/test/data/enm/study-XLSX-8fe70465-2da0-47a4-abdd-7aec47df0d4f.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-8fe70465-2da0-47a4-abdd-7aec47df0d4f",
- "owner": {
- "substance": {
- "uuid": "XLSX-254d54ae-e3ba-36d9-8dbd-c84d2296bb24"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "142",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "142",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "elongated"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-906e19d9-d772-4d24-877a-4a4f2e537475.json b/test/data/enm/study-XLSX-906e19d9-d772-4d24-877a-4a4f2e537475.json
deleted file mode 100644
index 54b092a..0000000
--- a/test/data/enm/study-XLSX-906e19d9-d772-4d24-877a-4a4f2e537475.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-906e19d9-d772-4d24-877a-4a4f2e537475",
- "owner": {
- "substance": {
- "uuid": "XLSX-ce148a7f-3da2-3fb8-9245-161eb6747522"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "180",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1911_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1911",
- "title": "NPO_1911 MTT Assay"
- },
- "endpoint": "180",
- "guideline": [
- "MTT"
- ]
- },
- "parameters": {
- "Cell line": "NIH/3T3",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 144,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.061
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.415
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.014
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-90ab298a-14d6-4c7b-8cef-c00de828e8b6.json b/test/data/enm/study-XLSX-90ab298a-14d6-4c7b-8cef-c00de828e8b6.json
deleted file mode 100644
index b7da74c..0000000
--- a/test/data/enm/study-XLSX-90ab298a-14d6-4c7b-8cef-c00de828e8b6.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-90ab298a-14d6-4c7b-8cef-c00de828e8b6",
- "owner": {
- "substance": {
- "uuid": "XLSX-1a8410a0-279c-3e82-bdfb-ce96b534df9b"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "020",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "020",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Vortexing"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 20
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 105
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-91f6a79a-8a3a-48d0-b151-be60e0b4c28c.json b/test/data/enm/study-XLSX-91f6a79a-8a3a-48d0-b151-be60e0b4c28c.json
deleted file mode 100644
index 476b455..0000000
--- a/test/data/enm/study-XLSX-91f6a79a-8a3a-48d0-b151-be60e0b4c28c.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-91f6a79a-8a3a-48d0-b151-be60e0b4c28c",
- "owner": {
- "substance": {
- "uuid": "XLSX-5a273d77-e518-3523-b377-c06f08182be1"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "021",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "021",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Vortexing"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 39
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 39
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 76
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-922a9b98-0660-458b-bc13-99678882fec6.json b/test/data/enm/study-XLSX-922a9b98-0660-458b-bc13-99678882fec6.json
deleted file mode 100644
index ffa69f9..0000000
--- a/test/data/enm/study-XLSX-922a9b98-0660-458b-bc13-99678882fec6.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-922a9b98-0660-458b-bc13-99678882fec6",
- "owner": {
- "substance": {
- "uuid": "XLSX-9f84408a-4414-33c9-a0f2-53bd19cf2d65"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "155",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "155",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NCI-H292",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 379.713
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 796.265
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 16.662
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-935b54e7-c32a-43c1-964a-3cfdc3b4cd17.json b/test/data/enm/study-XLSX-935b54e7-c32a-43c1-964a-3cfdc3b4cd17.json
deleted file mode 100644
index 176ed91..0000000
--- a/test/data/enm/study-XLSX-935b54e7-c32a-43c1-964a-3cfdc3b4cd17.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-935b54e7-c32a-43c1-964a-3cfdc3b4cd17",
- "owner": {
- "substance": {
- "uuid": "XLSX-d3a9ce39-6c15-3e4b-a5ce-5ea23e45ff16"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "108",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "108",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 140.736
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 184.62
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.755
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-93cd5725-3e3a-48f1-a786-e1db709707c1.json b/test/data/enm/study-XLSX-93cd5725-3e3a-48f1-a786-e1db709707c1.json
deleted file mode 100644
index 4bf932a..0000000
--- a/test/data/enm/study-XLSX-93cd5725-3e3a-48f1-a786-e1db709707c1.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-93cd5725-3e3a-48f1-a786-e1db709707c1",
- "owner": {
- "substance": {
- "uuid": "XLSX-5efaa24e-6eb5-3f1f-a9f4-680bc92364d6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "123",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "123",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Stirring",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2.931
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 8.283
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.214
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-93fb9d3f-15ff-4344-858f-802666bf44c2.json b/test/data/enm/study-XLSX-93fb9d3f-15ff-4344-858f-802666bf44c2.json
deleted file mode 100644
index 58a2e99..0000000
--- a/test/data/enm/study-XLSX-93fb9d3f-15ff-4344-858f-802666bf44c2.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "XLSX-93fb9d3f-15ff-4344-858f-802666bf44c2",
- "owner": {
- "substance": {
- "uuid": "XLSX-00cd0ac9-9adc-38a5-9520-89ddd591f75f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "192",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "192",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loQualifier": ">=",
- "loValue": 4.2,
- "upQualifier": "<=",
- "upValue": 4.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-941c33b0-476d-4bbf-9ff2-cd195483746b.json b/test/data/enm/study-XLSX-941c33b0-476d-4bbf-9ff2-cd195483746b.json
deleted file mode 100644
index 09520d4..0000000
--- a/test/data/enm/study-XLSX-941c33b0-476d-4bbf-9ff2-cd195483746b.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-941c33b0-476d-4bbf-9ff2-cd195483746b",
- "owner": {
- "substance": {
- "uuid": "XLSX-7394378e-b717-3418-a3f7-27db3cbbd8d0"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "034",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "034",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NRK-52E",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 664.216
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4318.666
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 146.178
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-95750335-a736-4142-9e08-b20fd61a57ce.json b/test/data/enm/study-XLSX-95750335-a736-4142-9e08-b20fd61a57ce.json
deleted file mode 100644
index 0e77326..0000000
--- a/test/data/enm/study-XLSX-95750335-a736-4142-9e08-b20fd61a57ce.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-95750335-a736-4142-9e08-b20fd61a57ce",
- "owner": {
- "substance": {
- "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "075",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "075",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": ""
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-95aee53d-3b33-4256-a631-60d4914942ee.json b/test/data/enm/study-XLSX-95aee53d-3b33-4256-a631-60d4914942ee.json
deleted file mode 100644
index 3cc5d52..0000000
--- a/test/data/enm/study-XLSX-95aee53d-3b33-4256-a631-60d4914942ee.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-95aee53d-3b33-4256-a631-60d4914942ee",
- "owner": {
- "substance": {
- "uuid": "XLSX-9eb0db98-07c0-37fb-9fc3-7126d72252c4"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "131",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "131",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Stirring",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 7.888
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 18.856
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.439
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-95ced9d3-da9a-4a70-9023-75dd5ca53e4d.json b/test/data/enm/study-XLSX-95ced9d3-da9a-4a70-9023-75dd5ca53e4d.json
deleted file mode 100644
index bfe80dc..0000000
--- a/test/data/enm/study-XLSX-95ced9d3-da9a-4a70-9023-75dd5ca53e4d.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-95ced9d3-da9a-4a70-9023-75dd5ca53e4d",
- "owner": {
- "substance": {
- "uuid": "XLSX-a0d9ab63-ee03-3224-984a-4bd276e3ea3a"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "143",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "143",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "elongated"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-988b517f-37db-4a85-a9cd-5dd7ca6a7451.json b/test/data/enm/study-XLSX-988b517f-37db-4a85-a9cd-5dd7ca6a7451.json
deleted file mode 100644
index c2a6945..0000000
--- a/test/data/enm/study-XLSX-988b517f-37db-4a85-a9cd-5dd7ca6a7451.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-988b517f-37db-4a85-a9cd-5dd7ca6a7451",
- "owner": {
- "substance": {
- "uuid": "XLSX-3dac4f9c-8c47-3085-9781-e70583adb12f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "167",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "167",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NCI-H292",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2.051
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2.632
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.023
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-99fae757-27bf-4193-9f98-119ee64ce72a.json b/test/data/enm/study-XLSX-99fae757-27bf-4193-9f98-119ee64ce72a.json
deleted file mode 100644
index 8765aa4..0000000
--- a/test/data/enm/study-XLSX-99fae757-27bf-4193-9f98-119ee64ce72a.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-99fae757-27bf-4193-9f98-119ee64ce72a",
- "owner": {
- "substance": {
- "uuid": "XLSX-92788191-34d9-39b4-aa9c-503da51fc1a6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "134",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "134",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Tip"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 21
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 25
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 228.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-9b36b98c-5251-4eb7-a94d-e133bdfe2037.json b/test/data/enm/study-XLSX-9b36b98c-5251-4eb7-a94d-e133bdfe2037.json
deleted file mode 100644
index 7fc591f..0000000
--- a/test/data/enm/study-XLSX-9b36b98c-5251-4eb7-a94d-e133bdfe2037.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-9b36b98c-5251-4eb7-a94d-e133bdfe2037",
- "owner": {
- "substance": {
- "uuid": "XLSX-64e97bde-be4b-34fb-b216-85724e66b02a"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "153",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "153",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "irregular"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.36
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-9c8b990c-b31c-493e-8d3e-e1d4fa9ab680.json b/test/data/enm/study-XLSX-9c8b990c-b31c-493e-8d3e-e1d4fa9ab680.json
deleted file mode 100644
index f6c3adc..0000000
--- a/test/data/enm/study-XLSX-9c8b990c-b31c-493e-8d3e-e1d4fa9ab680.json
+++ /dev/null
@@ -1,1016 +0,0 @@
-{
- "uuid": "XLSX-9c8b990c-b31c-493e-8d3e-e1d4fa9ab680",
- "owner": {
- "substance": {
- "uuid": "XLSX-ffd24485-3b05-3afe-b6ff-547800723f71"
- },
- "company": {
- "uuid": "XLSX-4bb81f08-059d-32ad-b5fd-71c6bcc6e0db",
- "name": "FP7 MARINA"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1371/journal.pone.0127174",
- "year": "2015",
- "owner": "P32 - KI"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "Cell viability - cell membrane damage: Lactate dehydrogenase assay (LDH) (CytoTox 96® Non-radioactive cytotoxicity assay - Promega, G1780) ",
- "guideline": [
- "Cytotoxicity using human monocyte-derived macrophages (HMDM)"
- ]
- },
- "parameters": {
- "CHMO:0002774": "N",
- "CLO_0000031": "HMDM",
- "CLO_0000031 EFO_0004443": "Karolinska University Hospital, Stockholm, Sweden - buffy coats from healthy adult blood donors ",
- "Cell culture conditions - Serum": "FBS (Gibco, 10500) ",
- "Cell culture conditions - Serum concentration in growth medium": 0.1,
- "Cell culture conditions - Serum concentration in treatment medium": "0,05%",
- "Cell line/Type - Full name": "Primary human monocyte-derived macrophages (HMDM)",
- "Dispersion agent": "water with 0,05% BSA",
- "NPO_1952": "Y",
- "NPO_1961": "Y",
- "NPO_1969 OBI_0000272": "NANOGENOTOX Dispersion protocol (http://www.nanogenotox.eu/files/PDF/web%20nanogenotox%20dispersion%20protocol.pdf) ",
- "OBI_0001911 BAO_0000114": "RPMI (Sigma, R0833)"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 108.781
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 106.652
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 105.891
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 107.078
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 108.447
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 112.329
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 102.237
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 95.211
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 93.02
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 91.927
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 92.629
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 93.728
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 95.639
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 88.661
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100.11
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 97.652
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 98.958
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 99.308
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 99.732
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 106.245
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 6,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 92.144
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 94.158
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 90.881
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 89.114
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 91.279
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 91.897
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 97.316
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 84.103
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 96.724
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 96.653
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 97.724
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100.39
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 102.499
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 99.344
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 99.792
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 100
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 93.762
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 91.671
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 87.902
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 88.886
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 96.703
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 96.042
- }
- },
- {
- "endpoint": "% cell viability",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "%",
- "loValue": 92.458
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-9d7cf58e-ab64-4366-9860-e81db77b8916.json b/test/data/enm/study-XLSX-9d7cf58e-ab64-4366-9860-e81db77b8916.json
deleted file mode 100644
index 6223413..0000000
--- a/test/data/enm/study-XLSX-9d7cf58e-ab64-4366-9860-e81db77b8916.json
+++ /dev/null
@@ -1,51 +0,0 @@
-{
- "uuid": "XLSX-9d7cf58e-ab64-4366-9860-e81db77b8916",
- "owner": {
- "substance": {
- "uuid": "XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "063",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "063",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "Heterogeneous"
- },
- "effects": [
- {
- "endpoint": "",
- "conditions": {
- },
- "result": {
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-9eed2c42-e5da-44ca-98b8-a8683e6eb4d9.json b/test/data/enm/study-XLSX-9eed2c42-e5da-44ca-98b8-a8683e6eb4d9.json
deleted file mode 100644
index 88a5473..0000000
--- a/test/data/enm/study-XLSX-9eed2c42-e5da-44ca-98b8-a8683e6eb4d9.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-9eed2c42-e5da-44ca-98b8-a8683e6eb4d9",
- "owner": {
- "substance": {
- "uuid": "XLSX-2acfa382-5109-3e49-9fd4-ef8d139be4b2"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "103",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "103",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "round/oblong"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-9fb561c6-a921-4171-a484-ecafa9355f43.json b/test/data/enm/study-XLSX-9fb561c6-a921-4171-a484-ecafa9355f43.json
deleted file mode 100644
index 2c8509b..0000000
--- a/test/data/enm/study-XLSX-9fb561c6-a921-4171-a484-ecafa9355f43.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-9fb561c6-a921-4171-a484-ecafa9355f43",
- "owner": {
- "substance": {
- "uuid": "XLSX-5cd11301-7cf1-3402-aaf8-853e5ed8ccde"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "177",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "177",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Vortexing"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 101
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 170
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 310
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-a047ee3a-7b56-4e5f-bdae-3695eefb80a1.json b/test/data/enm/study-XLSX-a047ee3a-7b56-4e5f-bdae-3695eefb80a1.json
deleted file mode 100644
index 676c255..0000000
--- a/test/data/enm/study-XLSX-a047ee3a-7b56-4e5f-bdae-3695eefb80a1.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-a047ee3a-7b56-4e5f-bdae-3695eefb80a1",
- "owner": {
- "substance": {
- "uuid": "XLSX-9eb0db98-07c0-37fb-9fc3-7126d72252c4"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "130",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "130",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NRK-52E",
- "Dispersion protocol": "Stirring",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 20.929
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 59.409
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.539
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-a05c36d7-b409-4400-afbb-2d3157a47feb.json b/test/data/enm/study-XLSX-a05c36d7-b409-4400-afbb-2d3157a47feb.json
deleted file mode 100644
index bd98511..0000000
--- a/test/data/enm/study-XLSX-a05c36d7-b409-4400-afbb-2d3157a47feb.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-a05c36d7-b409-4400-afbb-2d3157a47feb",
- "owner": {
- "substance": {
- "uuid": "XLSX-4ceef1bf-5f19-34e7-9d3d-51d65be297d7"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "175",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "175",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 92.799
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 446.42
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 14.145
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-a0b34fb3-ccd4-4dad-b1ff-4923745745cd.json b/test/data/enm/study-XLSX-a0b34fb3-ccd4-4dad-b1ff-4923745745cd.json
deleted file mode 100644
index ed72245..0000000
--- a/test/data/enm/study-XLSX-a0b34fb3-ccd4-4dad-b1ff-4923745745cd.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-a0b34fb3-ccd4-4dad-b1ff-4923745745cd",
- "owner": {
- "substance": {
- "uuid": "XLSX-64e97bde-be4b-34fb-b216-85724e66b02a"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "153",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "153",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": 40
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-a0dab393-5a42-42b7-8424-ba352f42811f.json b/test/data/enm/study-XLSX-a0dab393-5a42-42b7-8424-ba352f42811f.json
deleted file mode 100644
index 0c2bf31..0000000
--- a/test/data/enm/study-XLSX-a0dab393-5a42-42b7-8424-ba352f42811f.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-a0dab393-5a42-42b7-8424-ba352f42811f",
- "owner": {
- "substance": {
- "uuid": "XLSX-295d65e6-0d6e-3987-a67f-e4482fa28c71"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "099",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "099",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Stirring",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 306.165
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 360.85
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2.187
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-a1429af3-925b-4fd0-9652-3144efbe96bf.json b/test/data/enm/study-XLSX-a1429af3-925b-4fd0-9652-3144efbe96bf.json
deleted file mode 100644
index 2351c3f..0000000
--- a/test/data/enm/study-XLSX-a1429af3-925b-4fd0-9652-3144efbe96bf.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-a1429af3-925b-4fd0-9652-3144efbe96bf",
- "owner": {
- "substance": {
- "uuid": "XLSX-aa7e2fd6-c054-35ed-a9d9-1f40c1d179a3"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "141",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "141",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "elongated"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-a1d6108c-3461-41dc-bf7a-f83cedb47e41.json b/test/data/enm/study-XLSX-a1d6108c-3461-41dc-bf7a-f83cedb47e41.json
deleted file mode 100644
index 8f86d2a..0000000
--- a/test/data/enm/study-XLSX-a1d6108c-3461-41dc-bf7a-f83cedb47e41.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-a1d6108c-3461-41dc-bf7a-f83cedb47e41",
- "owner": {
- "substance": {
- "uuid": "XLSX-673c8355-a823-3bf2-a319-0d8af43e4d90"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "145",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "145",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 512.728
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 902.739
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 15.6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-a2abfc7c-9df5-4129-aad9-37c4f3366f71.json b/test/data/enm/study-XLSX-a2abfc7c-9df5-4129-aad9-37c4f3366f71.json
deleted file mode 100644
index 5bc0b2d..0000000
--- a/test/data/enm/study-XLSX-a2abfc7c-9df5-4129-aad9-37c4f3366f71.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-a2abfc7c-9df5-4129-aad9-37c4f3366f71",
- "owner": {
- "substance": {
- "uuid": "XLSX-673c8355-a823-3bf2-a319-0d8af43e4d90"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "146",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "146",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "NRK-52E",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 493.144
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1849.588
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 54.258
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-a336e49f-75ba-477d-acb6-7d6abe0eff8f.json b/test/data/enm/study-XLSX-a336e49f-75ba-477d-acb6-7d6abe0eff8f.json
deleted file mode 100644
index c603aab..0000000
--- a/test/data/enm/study-XLSX-a336e49f-75ba-477d-acb6-7d6abe0eff8f.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-a336e49f-75ba-477d-acb6-7d6abe0eff8f",
- "owner": {
- "substance": {
- "uuid": "XLSX-5a273d77-e518-3523-b377-c06f08182be1"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "021",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "021",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2/g",
- "loValue": 14.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-a43d29ec-b7f4-40ef-a9fc-9178db646c83.json b/test/data/enm/study-XLSX-a43d29ec-b7f4-40ef-a9fc-9178db646c83.json
deleted file mode 100644
index 4d6a936..0000000
--- a/test/data/enm/study-XLSX-a43d29ec-b7f4-40ef-a9fc-9178db646c83.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-a43d29ec-b7f4-40ef-a9fc-9178db646c83",
- "owner": {
- "substance": {
- "uuid": "XLSX-acb82e6d-63d6-3cf4-a796-a281b1ba835f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "012",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "012",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "round"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-a5483c3a-0b3e-400f-aff8-55dd5a1599bd.json b/test/data/enm/study-XLSX-a5483c3a-0b3e-400f-aff8-55dd5a1599bd.json
deleted file mode 100644
index 96a715d..0000000
--- a/test/data/enm/study-XLSX-a5483c3a-0b3e-400f-aff8-55dd5a1599bd.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-a5483c3a-0b3e-400f-aff8-55dd5a1599bd",
- "owner": {
- "substance": {
- "uuid": "XLSX-ce148a7f-3da2-3fb8-9245-161eb6747522"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "179",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "179",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "Mainly 2 euhedral morphologies: aspect ratio 1(20–250 nm) and aspect ratio 2:8.5 (10–450 nm)"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.68
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-a56cbeaa-ece4-4768-a70c-bc54bb329b78.json b/test/data/enm/study-XLSX-a56cbeaa-ece4-4768-a70c-bc54bb329b78.json
deleted file mode 100644
index c9e0702..0000000
--- a/test/data/enm/study-XLSX-a56cbeaa-ece4-4768-a70c-bc54bb329b78.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-a56cbeaa-ece4-4768-a70c-bc54bb329b78",
- "owner": {
- "substance": {
- "uuid": "XLSX-4ceef1bf-5f19-34e7-9d3d-51d65be297d7"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "176",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "176",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "Mainly 2 euhedral morphologies: aspect ratio 1(20–250 nm) and aspect ratio 2:8.5 (10–450 nm)"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.68
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-a5a35727-466c-4ffb-acb8-e33b79af6e3e.json b/test/data/enm/study-XLSX-a5a35727-466c-4ffb-acb8-e33b79af6e3e.json
deleted file mode 100644
index a625582..0000000
--- a/test/data/enm/study-XLSX-a5a35727-466c-4ffb-acb8-e33b79af6e3e.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-a5a35727-466c-4ffb-acb8-e33b79af6e3e",
- "owner": {
- "substance": {
- "uuid": "XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "063",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "063",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "U-87 MG",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 72,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4.156
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 14.737
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.423
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-a62ab9a0-c6bd-4ef8-87ec-4198433fd32c.json b/test/data/enm/study-XLSX-a62ab9a0-c6bd-4ef8-87ec-4198433fd32c.json
deleted file mode 100644
index 048d229..0000000
--- a/test/data/enm/study-XLSX-a62ab9a0-c6bd-4ef8-87ec-4198433fd32c.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-a62ab9a0-c6bd-4ef8-87ec-4198433fd32c",
- "owner": {
- "substance": {
- "uuid": "XLSX-a44564c5-1458-3e3b-aca7-d63f5221d2a8"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "183",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "183",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 11.144
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 16.33
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.207
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-a7a3671c-5597-440b-8a67-988e6a312d38.json b/test/data/enm/study-XLSX-a7a3671c-5597-440b-8a67-988e6a312d38.json
deleted file mode 100644
index c0f4994..0000000
--- a/test/data/enm/study-XLSX-a7a3671c-5597-440b-8a67-988e6a312d38.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-a7a3671c-5597-440b-8a67-988e6a312d38",
- "owner": {
- "substance": {
- "uuid": "XLSX-c42f434e-6295-3715-8a23-ce26f87642a6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "187",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "187",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 102.061
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 23702.809
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 944.03
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-a7ca238e-20b3-4531-88fa-31f1e0e64711.json b/test/data/enm/study-XLSX-a7ca238e-20b3-4531-88fa-31f1e0e64711.json
deleted file mode 100644
index e604ef9..0000000
--- a/test/data/enm/study-XLSX-a7ca238e-20b3-4531-88fa-31f1e0e64711.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-a7ca238e-20b3-4531-88fa-31f1e0e64711",
- "owner": {
- "substance": {
- "uuid": "XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "060",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "060",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "U-87 MG",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 2,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 10.767
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 51.388
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.625
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-a8868438-dc46-4c83-9993-9fcc22cf2875.json b/test/data/enm/study-XLSX-a8868438-dc46-4c83-9993-9fcc22cf2875.json
deleted file mode 100644
index c6317e8..0000000
--- a/test/data/enm/study-XLSX-a8868438-dc46-4c83-9993-9fcc22cf2875.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-a8868438-dc46-4c83-9993-9fcc22cf2875",
- "owner": {
- "substance": {
- "uuid": "XLSX-5d07b463-d3a8-35b1-826e-076f9f2328c8"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "081",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "081",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": -3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-a8bf29af-8575-4880-97ae-38165bf06f29.json b/test/data/enm/study-XLSX-a8bf29af-8575-4880-97ae-38165bf06f29.json
deleted file mode 100644
index 5123c61..0000000
--- a/test/data/enm/study-XLSX-a8bf29af-8575-4880-97ae-38165bf06f29.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-a8bf29af-8575-4880-97ae-38165bf06f29",
- "owner": {
- "substance": {
- "uuid": "XLSX-5efaa24e-6eb5-3f1f-a9f4-680bc92364d6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "120",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "120",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Stirring",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 11.366
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 16.082
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.189
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-a8cf1175-b240-4fd9-bb34-fe0c1ad19cbc.json b/test/data/enm/study-XLSX-a8cf1175-b240-4fd9-bb34-fe0c1ad19cbc.json
deleted file mode 100644
index c13dcc9..0000000
--- a/test/data/enm/study-XLSX-a8cf1175-b240-4fd9-bb34-fe0c1ad19cbc.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-a8cf1175-b240-4fd9-bb34-fe0c1ad19cbc",
- "owner": {
- "substance": {
- "uuid": "XLSX-2aef353b-440f-32a7-8447-1974997a69a8"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "190",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "190",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 167.707
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 764.28
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 23.863
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-a935b824-81e4-4226-8471-1ea5ee9a1462.json b/test/data/enm/study-XLSX-a935b824-81e4-4226-8471-1ea5ee9a1462.json
deleted file mode 100644
index 587a09c..0000000
--- a/test/data/enm/study-XLSX-a935b824-81e4-4226-8471-1ea5ee9a1462.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "XLSX-a935b824-81e4-4226-8471-1ea5ee9a1462",
- "owner": {
- "substance": {
- "uuid": "XLSX-254d54ae-e3ba-36d9-8dbd-c84d2296bb24"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "142",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "142",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Bath"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 21.45
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 37.6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-aa833780-b59c-4cba-b7a2-6ea9ff4c0dfd.json b/test/data/enm/study-XLSX-aa833780-b59c-4cba-b7a2-6ea9ff4c0dfd.json
deleted file mode 100644
index 95bb970..0000000
--- a/test/data/enm/study-XLSX-aa833780-b59c-4cba-b7a2-6ea9ff4c0dfd.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-aa833780-b59c-4cba-b7a2-6ea9ff4c0dfd",
- "owner": {
- "substance": {
- "uuid": "XLSX-1a8410a0-279c-3e82-bdfb-ce96b534df9b"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "020",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "020",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 22.657
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 77.437
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2.191
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-aaf7cd45-f792-4990-ad2b-a7fecfac4baf.json b/test/data/enm/study-XLSX-aaf7cd45-f792-4990-ad2b-a7fecfac4baf.json
deleted file mode 100644
index f1aba83..0000000
--- a/test/data/enm/study-XLSX-aaf7cd45-f792-4990-ad2b-a7fecfac4baf.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-aaf7cd45-f792-4990-ad2b-a7fecfac4baf",
- "owner": {
- "substance": {
- "uuid": "XLSX-2acfa382-5109-3e49-9fd4-ef8d139be4b2"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "103",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "103",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 159
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-ab048fd9-e165-4ccb-aaf2-03d537f8c4aa.json b/test/data/enm/study-XLSX-ab048fd9-e165-4ccb-aaf2-03d537f8c4aa.json
deleted file mode 100644
index e1111f0..0000000
--- a/test/data/enm/study-XLSX-ab048fd9-e165-4ccb-aaf2-03d537f8c4aa.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-ab048fd9-e165-4ccb-aaf2-03d537f8c4aa",
- "owner": {
- "substance": {
- "uuid": "XLSX-92788191-34d9-39b4-aa9c-503da51fc1a6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "132",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1911_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1911",
- "title": "NPO_1911 MTT Assay"
- },
- "endpoint": "132",
- "guideline": [
- "MTT"
- ]
- },
- "parameters": {
- "Cell line": "SH-SY5Y",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 3,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 324.686
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 606.981
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 11.292
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-ab328a52-255b-4273-b22e-c57d6992af2d.json b/test/data/enm/study-XLSX-ab328a52-255b-4273-b22e-c57d6992af2d.json
deleted file mode 100644
index db451bf..0000000
--- a/test/data/enm/study-XLSX-ab328a52-255b-4273-b22e-c57d6992af2d.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-ab328a52-255b-4273-b22e-c57d6992af2d",
- "owner": {
- "substance": {
- "uuid": "XLSX-a1b25bf2-6046-3c16-ba1c-3efb11b5a4d6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "156",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "156",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "Irregular euhedral"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.36
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-ab7c83f6-6b4f-4a9a-8171-1e65edbc5733.json b/test/data/enm/study-XLSX-ab7c83f6-6b4f-4a9a-8171-1e65edbc5733.json
deleted file mode 100644
index c950d3e..0000000
--- a/test/data/enm/study-XLSX-ab7c83f6-6b4f-4a9a-8171-1e65edbc5733.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-ab7c83f6-6b4f-4a9a-8171-1e65edbc5733",
- "owner": {
- "substance": {
- "uuid": "XLSX-6fac9681-a5c7-337c-9e35-87c04579f0e6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "083",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "083",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Stirring"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 5
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 13
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 5743
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-abd6a23d-e9ed-494b-8fb4-f5e46a84c330.json b/test/data/enm/study-XLSX-abd6a23d-e9ed-494b-8fb4-f5e46a84c330.json
deleted file mode 100644
index febdcbf..0000000
--- a/test/data/enm/study-XLSX-abd6a23d-e9ed-494b-8fb4-f5e46a84c330.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-abd6a23d-e9ed-494b-8fb4-f5e46a84c330",
- "owner": {
- "substance": {
- "uuid": "XLSX-2acfa382-5109-3e49-9fd4-ef8d139be4b2"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "103",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "103",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 46.88
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 72.625
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.03
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-ac16e65e-a24a-4453-8caf-c080a91c3fd2.json b/test/data/enm/study-XLSX-ac16e65e-a24a-4453-8caf-c080a91c3fd2.json
deleted file mode 100644
index 5f8dd8a..0000000
--- a/test/data/enm/study-XLSX-ac16e65e-a24a-4453-8caf-c080a91c3fd2.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "XLSX-ac16e65e-a24a-4453-8caf-c080a91c3fd2",
- "owner": {
- "substance": {
- "uuid": "XLSX-2aef353b-440f-32a7-8447-1974997a69a8"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "190",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "190",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Tip"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 39
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 42
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-ac2c77a1-4e2f-44db-85f5-c75958709285.json b/test/data/enm/study-XLSX-ac2c77a1-4e2f-44db-85f5-c75958709285.json
deleted file mode 100644
index 063b172..0000000
--- a/test/data/enm/study-XLSX-ac2c77a1-4e2f-44db-85f5-c75958709285.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-ac2c77a1-4e2f-44db-85f5-c75958709285",
- "owner": {
- "substance": {
- "uuid": "XLSX-de76fc02-ef1f-310a-b61f-6aab5b586412"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "119",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "119",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Bath"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 16
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 24
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 319
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-ac6f6855-f918-42a8-acc0-df0852439343.json b/test/data/enm/study-XLSX-ac6f6855-f918-42a8-acc0-df0852439343.json
deleted file mode 100644
index 47ad680..0000000
--- a/test/data/enm/study-XLSX-ac6f6855-f918-42a8-acc0-df0852439343.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-ac6f6855-f918-42a8-acc0-df0852439343",
- "owner": {
- "substance": {
- "uuid": "XLSX-251091e3-55d1-36b3-854c-d1933ec46461"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "027",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "027",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 15.721
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 131.872
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4.646
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-aca70626-8237-42de-84c9-39abeeec29bf.json b/test/data/enm/study-XLSX-aca70626-8237-42de-84c9-39abeeec29bf.json
deleted file mode 100644
index 15aab0b..0000000
--- a/test/data/enm/study-XLSX-aca70626-8237-42de-84c9-39abeeec29bf.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-aca70626-8237-42de-84c9-39abeeec29bf",
- "owner": {
- "substance": {
- "uuid": "XLSX-aa7e2fd6-c054-35ed-a9d9-1f40c1d179a3"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "136",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "136",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 5651.743
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 8250.276
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 103.941
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-acbfcef0-41b2-4e88-8339-6bbed4bd54ad.json b/test/data/enm/study-XLSX-acbfcef0-41b2-4e88-8339-6bbed4bd54ad.json
deleted file mode 100644
index 360e523..0000000
--- a/test/data/enm/study-XLSX-acbfcef0-41b2-4e88-8339-6bbed4bd54ad.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-acbfcef0-41b2-4e88-8339-6bbed4bd54ad",
- "owner": {
- "substance": {
- "uuid": "XLSX-9eb0db98-07c0-37fb-9fc3-7126d72252c4"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "131",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "131",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": -30.6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-ad2eb9a2-29c3-4196-97ca-8c6b61e49d63.json b/test/data/enm/study-XLSX-ad2eb9a2-29c3-4196-97ca-8c6b61e49d63.json
deleted file mode 100644
index 44c7f0c..0000000
--- a/test/data/enm/study-XLSX-ad2eb9a2-29c3-4196-97ca-8c6b61e49d63.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-ad2eb9a2-29c3-4196-97ca-8c6b61e49d63",
- "owner": {
- "substance": {
- "uuid": "XLSX-2acfa382-5109-3e49-9fd4-ef8d139be4b2"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "102",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "102",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 52.36
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 75.424
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.923
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-afed0a8a-a644-4b2e-afc4-738f8b84c2eb.json b/test/data/enm/study-XLSX-afed0a8a-a644-4b2e-afc4-738f8b84c2eb.json
deleted file mode 100644
index 22556dd..0000000
--- a/test/data/enm/study-XLSX-afed0a8a-a644-4b2e-afc4-738f8b84c2eb.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-afed0a8a-a644-4b2e-afc4-738f8b84c2eb",
- "owner": {
- "substance": {
- "uuid": "XLSX-f1b0af03-df66-3849-93cc-4ca706c0f751"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "161",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "161",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 53.134
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 75.966
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.913
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-b12efbec-ec75-456f-a51f-176f137037aa.json b/test/data/enm/study-XLSX-b12efbec-ec75-456f-a51f-176f137037aa.json
deleted file mode 100644
index 7bb7618..0000000
--- a/test/data/enm/study-XLSX-b12efbec-ec75-456f-a51f-176f137037aa.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "XLSX-b12efbec-ec75-456f-a51f-176f137037aa",
- "owner": {
- "substance": {
- "uuid": "XLSX-7677801c-4895-3ffd-807a-832c589341df"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "151",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "151",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Bath"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 21.8
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 41.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-b1b21fdc-b9aa-4783-a17f-379734d0574c.json b/test/data/enm/study-XLSX-b1b21fdc-b9aa-4783-a17f-379734d0574c.json
deleted file mode 100644
index ff8aee0..0000000
--- a/test/data/enm/study-XLSX-b1b21fdc-b9aa-4783-a17f-379734d0574c.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-b1b21fdc-b9aa-4783-a17f-379734d0574c",
- "owner": {
- "substance": {
- "uuid": "XLSX-251091e3-55d1-36b3-854c-d1933ec46461"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "027",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "027",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2/g",
- "loValue": 8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-b34234d4-bef1-4fef-ac7f-38435df1781d.json b/test/data/enm/study-XLSX-b34234d4-bef1-4fef-ac7f-38435df1781d.json
deleted file mode 100644
index ab47c18..0000000
--- a/test/data/enm/study-XLSX-b34234d4-bef1-4fef-ac7f-38435df1781d.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-b34234d4-bef1-4fef-ac7f-38435df1781d",
- "owner": {
- "substance": {
- "uuid": "XLSX-92788191-34d9-39b4-aa9c-503da51fc1a6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "133",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1911_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1911",
- "title": "NPO_1911 MTT Assay"
- },
- "endpoint": "133",
- "guideline": [
- "MTT"
- ]
- },
- "parameters": {
- "Cell line": "SH-SY5Y",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 6,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1857.212
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 11349.986
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 379.711
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-b378a9c3-bc69-4b20-a261-b652321b0b4d.json b/test/data/enm/study-XLSX-b378a9c3-bc69-4b20-a261-b652321b0b4d.json
deleted file mode 100644
index 7973cc7..0000000
--- a/test/data/enm/study-XLSX-b378a9c3-bc69-4b20-a261-b652321b0b4d.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-b378a9c3-bc69-4b20-a261-b652321b0b4d",
- "owner": {
- "substance": {
- "uuid": "XLSX-ade46bc8-d87f-3f9b-afd0-11ca32e5caeb"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "178",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "178",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "Mainly 2 euhedral morphologies: aspect ratio 1(20–250 nm) and aspect ratio 2:8.5 (10–450 nm)"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.68
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-b3b95bc8-cb08-4ae0-aec1-df7d9ba1d4f5.json b/test/data/enm/study-XLSX-b3b95bc8-cb08-4ae0-aec1-df7d9ba1d4f5.json
deleted file mode 100644
index e13d5ba..0000000
--- a/test/data/enm/study-XLSX-b3b95bc8-cb08-4ae0-aec1-df7d9ba1d4f5.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-b3b95bc8-cb08-4ae0-aec1-df7d9ba1d4f5",
- "owner": {
- "substance": {
- "uuid": "XLSX-95020ff3-17ee-3889-8a9f-f2555dc4a930"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "004",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "004",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 575.472
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 779.306
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 8.153
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-b49c9402-ac61-4b6e-83bf-6fbb749325f2.json b/test/data/enm/study-XLSX-b49c9402-ac61-4b6e-83bf-6fbb749325f2.json
deleted file mode 100644
index f38bb22..0000000
--- a/test/data/enm/study-XLSX-b49c9402-ac61-4b6e-83bf-6fbb749325f2.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-b49c9402-ac61-4b6e-83bf-6fbb749325f2",
- "owner": {
- "substance": {
- "uuid": "XLSX-3dac4f9c-8c47-3085-9781-e70583adb12f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "167",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "167",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": 24.3
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-b5b9a882-9563-4a07-a878-5a77385b69cc.json b/test/data/enm/study-XLSX-b5b9a882-9563-4a07-a878-5a77385b69cc.json
deleted file mode 100644
index d135c4c..0000000
--- a/test/data/enm/study-XLSX-b5b9a882-9563-4a07-a878-5a77385b69cc.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-b5b9a882-9563-4a07-a878-5a77385b69cc",
- "owner": {
- "substance": {
- "uuid": "XLSX-ade46bc8-d87f-3f9b-afd0-11ca32e5caeb"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "178",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1911_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1911",
- "title": "NPO_1911 MTT Assay"
- },
- "endpoint": "178",
- "guideline": [
- "MTT"
- ]
- },
- "parameters": {
- "Cell line": "mES",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 240,
- "Serum concentration,%": 0.15
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 8.273
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 9.65
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.055
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-b65865f0-f8d0-43fa-9395-f8416d794590.json b/test/data/enm/study-XLSX-b65865f0-f8d0-43fa-9395-f8416d794590.json
deleted file mode 100644
index 9c572ed..0000000
--- a/test/data/enm/study-XLSX-b65865f0-f8d0-43fa-9395-f8416d794590.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-b65865f0-f8d0-43fa-9395-f8416d794590",
- "owner": {
- "substance": {
- "uuid": "XLSX-d7934c3e-9eac-34bc-8c60-4cf0c46e92a3"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "007",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "007",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 182.915
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 293.624
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4.428
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-b686cad9-ae22-4bde-bd69-96bd964a63be.json b/test/data/enm/study-XLSX-b686cad9-ae22-4bde-bd69-96bd964a63be.json
deleted file mode 100644
index 274d942..0000000
--- a/test/data/enm/study-XLSX-b686cad9-ae22-4bde-bd69-96bd964a63be.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-b686cad9-ae22-4bde-bd69-96bd964a63be",
- "owner": {
- "substance": {
- "uuid": "XLSX-ad0a7571-a887-3611-a508-f32ad71f20be"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "079",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "079",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": ""
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-ba37cf7d-884b-49a2-947e-e162ea7bcf89.json b/test/data/enm/study-XLSX-ba37cf7d-884b-49a2-947e-e162ea7bcf89.json
deleted file mode 100644
index 86eb7eb..0000000
--- a/test/data/enm/study-XLSX-ba37cf7d-884b-49a2-947e-e162ea7bcf89.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-ba37cf7d-884b-49a2-947e-e162ea7bcf89",
- "owner": {
- "substance": {
- "uuid": "XLSX-de76fc02-ef1f-310a-b61f-6aab5b586412"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "119",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "119",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "(m2/g)",
- "loValue": 203.92
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-bae43e10-571d-4733-97da-cbb0e72b13d3.json b/test/data/enm/study-XLSX-bae43e10-571d-4733-97da-cbb0e72b13d3.json
deleted file mode 100644
index 4740b08..0000000
--- a/test/data/enm/study-XLSX-bae43e10-571d-4733-97da-cbb0e72b13d3.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-bae43e10-571d-4733-97da-cbb0e72b13d3",
- "owner": {
- "substance": {
- "uuid": "XLSX-53ac37fa-9e10-3f71-9d74-bc47f28880ff"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "185",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "185",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "circles, ellipses, rectangles or squares"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-bb5f1e4f-085c-496a-8219-669e19a4955a.json b/test/data/enm/study-XLSX-bb5f1e4f-085c-496a-8219-669e19a4955a.json
deleted file mode 100644
index 5c19566..0000000
--- a/test/data/enm/study-XLSX-bb5f1e4f-085c-496a-8219-669e19a4955a.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-bb5f1e4f-085c-496a-8219-669e19a4955a",
- "owner": {
- "substance": {
- "uuid": "XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "059",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "059",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "U-87 MG",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 1,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 5.51
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 29.143
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.945
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-bb937f21-da37-4fa8-b1f0-1a0eb28ccf72.json b/test/data/enm/study-XLSX-bb937f21-da37-4fa8-b1f0-1a0eb28ccf72.json
deleted file mode 100644
index 1ac08a6..0000000
--- a/test/data/enm/study-XLSX-bb937f21-da37-4fa8-b1f0-1a0eb28ccf72.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-bb937f21-da37-4fa8-b1f0-1a0eb28ccf72",
- "owner": {
- "substance": {
- "uuid": "XLSX-ad0a7571-a887-3611-a508-f32ad71f20be"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "078",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "078",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "U-87 MG",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 6.156
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 16.615
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.418
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-bc7b3164-f03a-4700-a535-8c8c79587b22.json b/test/data/enm/study-XLSX-bc7b3164-f03a-4700-a535-8c8c79587b22.json
deleted file mode 100644
index dbdac0a..0000000
--- a/test/data/enm/study-XLSX-bc7b3164-f03a-4700-a535-8c8c79587b22.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-bc7b3164-f03a-4700-a535-8c8c79587b22",
- "owner": {
- "substance": {
- "uuid": "XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "054",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "054",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "SK-OV-3",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 2,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 25.065
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 62.989
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.517
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-bd7e614c-d9df-41fa-964b-4e36f440cd06.json b/test/data/enm/study-XLSX-bd7e614c-d9df-41fa-964b-4e36f440cd06.json
deleted file mode 100644
index 4c1f3ee..0000000
--- a/test/data/enm/study-XLSX-bd7e614c-d9df-41fa-964b-4e36f440cd06.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-bd7e614c-d9df-41fa-964b-4e36f440cd06",
- "owner": {
- "substance": {
- "uuid": "XLSX-d3a9ce39-6c15-3e4b-a5ce-5ea23e45ff16"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "113",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "113",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Bath"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 14
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 22
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 238
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-bdde064a-bb90-4805-a737-81fa8c2775e6.json b/test/data/enm/study-XLSX-bdde064a-bb90-4805-a737-81fa8c2775e6.json
deleted file mode 100644
index 44e9f50..0000000
--- a/test/data/enm/study-XLSX-bdde064a-bb90-4805-a737-81fa8c2775e6.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-bdde064a-bb90-4805-a737-81fa8c2775e6",
- "owner": {
- "substance": {
- "uuid": "XLSX-5e44448d-216f-3b91-891a-a7e1de030a13"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "186",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "186",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 71.594
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 104.074
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.299
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-be9e53fb-9f30-402b-b0e3-e655a0d3d38f.json b/test/data/enm/study-XLSX-be9e53fb-9f30-402b-b0e3-e655a0d3d38f.json
deleted file mode 100644
index f222464..0000000
--- a/test/data/enm/study-XLSX-be9e53fb-9f30-402b-b0e3-e655a0d3d38f.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-be9e53fb-9f30-402b-b0e3-e655a0d3d38f",
- "owner": {
- "substance": {
- "uuid": "XLSX-2ca46b71-491d-3e73-9b4c-3fb885705274"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "157",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "157",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "irregular spheres (1–4 nm), euhedral particle (10–100 nm), fractal-like structures (100–200 nm), big irregular polyhedral parti"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.36
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-bf043d25-9771-44e7-bf9f-45d56af83b89.json b/test/data/enm/study-XLSX-bf043d25-9771-44e7-bf9f-45d56af83b89.json
deleted file mode 100644
index 5d612cb..0000000
--- a/test/data/enm/study-XLSX-bf043d25-9771-44e7-bf9f-45d56af83b89.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-bf043d25-9771-44e7-bf9f-45d56af83b89",
- "owner": {
- "substance": {
- "uuid": "XLSX-c42f434e-6295-3715-8a23-ce26f87642a6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "188",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "188",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": 28
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-bf0a5f5d-08e3-4fae-89c4-0e457d2b360a.json b/test/data/enm/study-XLSX-bf0a5f5d-08e3-4fae-89c4-0e457d2b360a.json
deleted file mode 100644
index 6023696..0000000
--- a/test/data/enm/study-XLSX-bf0a5f5d-08e3-4fae-89c4-0e457d2b360a.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-bf0a5f5d-08e3-4fae-89c4-0e457d2b360a",
- "owner": {
- "substance": {
- "uuid": "XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "052",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "052",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "SK-OV-3",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": "0,5",
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 17.859
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 51.039
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.327
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-bf8e4645-e635-4c75-bf83-2ab6f09ea04d.json b/test/data/enm/study-XLSX-bf8e4645-e635-4c75-bf83-2ab6f09ea04d.json
deleted file mode 100644
index bf791db..0000000
--- a/test/data/enm/study-XLSX-bf8e4645-e635-4c75-bf83-2ab6f09ea04d.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-bf8e4645-e635-4c75-bf83-2ab6f09ea04d",
- "owner": {
- "substance": {
- "uuid": "XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "055",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "055",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "SK-OV-3",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 8.678
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 20.706
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.481
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c08c12ec-761b-47d7-85bb-0c7af4d36e5e.json b/test/data/enm/study-XLSX-c08c12ec-761b-47d7-85bb-0c7af4d36e5e.json
deleted file mode 100644
index f028b9b..0000000
--- a/test/data/enm/study-XLSX-c08c12ec-761b-47d7-85bb-0c7af4d36e5e.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-c08c12ec-761b-47d7-85bb-0c7af4d36e5e",
- "owner": {
- "substance": {
- "uuid": "XLSX-9eb0db98-07c0-37fb-9fc3-7126d72252c4"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "128",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "128",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Stirring",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 33.663
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 49.612
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.638
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c107487a-43f2-499d-836b-849500f07a7b.json b/test/data/enm/study-XLSX-c107487a-43f2-499d-836b-849500f07a7b.json
deleted file mode 100644
index 498cfa7..0000000
--- a/test/data/enm/study-XLSX-c107487a-43f2-499d-836b-849500f07a7b.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-c107487a-43f2-499d-836b-849500f07a7b",
- "owner": {
- "substance": {
- "uuid": "XLSX-36cbb933-ec3a-3d8b-b80f-0d5b6e76edc5"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "028",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "028",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Vortexing"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 81.2
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 81.2
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 155
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c1cb4d7b-333a-4ca0-9a9e-82f77d809b73.json b/test/data/enm/study-XLSX-c1cb4d7b-333a-4ca0-9a9e-82f77d809b73.json
deleted file mode 100644
index 467b7be..0000000
--- a/test/data/enm/study-XLSX-c1cb4d7b-333a-4ca0-9a9e-82f77d809b73.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-c1cb4d7b-333a-4ca0-9a9e-82f77d809b73",
- "owner": {
- "substance": {
- "uuid": "XLSX-5efaa24e-6eb5-3f1f-a9f4-680bc92364d6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "121",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "121",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Dispersion protocol": "Stirring",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 16.831
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 50.546
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.349
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c1cf764a-885c-46cd-bad1-83de62f8e04c.json b/test/data/enm/study-XLSX-c1cf764a-885c-46cd-bad1-83de62f8e04c.json
deleted file mode 100644
index d97fe7e..0000000
--- a/test/data/enm/study-XLSX-c1cf764a-885c-46cd-bad1-83de62f8e04c.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-c1cf764a-885c-46cd-bad1-83de62f8e04c",
- "owner": {
- "substance": {
- "uuid": "XLSX-ad0a7571-a887-3611-a508-f32ad71f20be"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "076",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "076",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "SK-OV-3",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 14.867
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 43.786
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.157
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c25ead1f-7e35-4a65-bfc6-44ae04c3ee8a.json b/test/data/enm/study-XLSX-c25ead1f-7e35-4a65-bfc6-44ae04c3ee8a.json
deleted file mode 100644
index ac68f87..0000000
--- a/test/data/enm/study-XLSX-c25ead1f-7e35-4a65-bfc6-44ae04c3ee8a.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-c25ead1f-7e35-4a65-bfc6-44ae04c3ee8a",
- "owner": {
- "substance": {
- "uuid": "XLSX-6fac9681-a5c7-337c-9e35-87c04579f0e6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "082",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "082",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Stirring",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 603.245
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 3500.754
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 115.9
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c29fd89c-ff90-43a9-a0f0-6c35478ce732.json b/test/data/enm/study-XLSX-c29fd89c-ff90-43a9-a0f0-6c35478ce732.json
deleted file mode 100644
index ae7247a..0000000
--- a/test/data/enm/study-XLSX-c29fd89c-ff90-43a9-a0f0-6c35478ce732.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-c29fd89c-ff90-43a9-a0f0-6c35478ce732",
- "owner": {
- "substance": {
- "uuid": "XLSX-5a273d77-e518-3523-b377-c06f08182be1"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "021",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "021",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "sphere"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c31ebb5c-2eca-409b-8db1-e6c16d766d0e.json b/test/data/enm/study-XLSX-c31ebb5c-2eca-409b-8db1-e6c16d766d0e.json
deleted file mode 100644
index dd1fd6d..0000000
--- a/test/data/enm/study-XLSX-c31ebb5c-2eca-409b-8db1-e6c16d766d0e.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-c31ebb5c-2eca-409b-8db1-e6c16d766d0e",
- "owner": {
- "substance": {
- "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "069",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "069",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "SK-OV-3",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 72,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 49.303
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 139.828
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 3.621
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c324c907-a6cb-4c9f-aa3b-c19f186edf94.json b/test/data/enm/study-XLSX-c324c907-a6cb-4c9f-aa3b-c19f186edf94.json
deleted file mode 100644
index fcd6bd7..0000000
--- a/test/data/enm/study-XLSX-c324c907-a6cb-4c9f-aa3b-c19f186edf94.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-c324c907-a6cb-4c9f-aa3b-c19f186edf94",
- "owner": {
- "substance": {
- "uuid": "XLSX-1a8410a0-279c-3e82-bdfb-ce96b534df9b"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "020",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "020",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "sphere"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c38223c2-1f6d-4ab9-893a-23d71fa75bda.json b/test/data/enm/study-XLSX-c38223c2-1f6d-4ab9-893a-23d71fa75bda.json
deleted file mode 100644
index 653acd8..0000000
--- a/test/data/enm/study-XLSX-c38223c2-1f6d-4ab9-893a-23d71fa75bda.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-c38223c2-1f6d-4ab9-893a-23d71fa75bda",
- "owner": {
- "substance": {
- "uuid": "XLSX-7d5a7a1b-5069-3256-b796-2361afcf3bfe"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "032",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "032",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NCI-H292",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 438.41
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4714.513
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 171.044
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c3ce7a70-7346-42b7-8e09-bda2d8bd801f.json b/test/data/enm/study-XLSX-c3ce7a70-7346-42b7-8e09-bda2d8bd801f.json
deleted file mode 100644
index 88e0635..0000000
--- a/test/data/enm/study-XLSX-c3ce7a70-7346-42b7-8e09-bda2d8bd801f.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-c3ce7a70-7346-42b7-8e09-bda2d8bd801f",
- "owner": {
- "substance": {
- "uuid": "XLSX-295d65e6-0d6e-3987-a67f-e4482fa28c71"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "096",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "096",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "16HBE",
- "Dispersion protocol": "Stirring",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2171.636
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2891.434
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 28.792
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c47b5dd9-287a-4e8b-a0da-dbaa70206cf4.json b/test/data/enm/study-XLSX-c47b5dd9-287a-4e8b-a0da-dbaa70206cf4.json
deleted file mode 100644
index 4f70608..0000000
--- a/test/data/enm/study-XLSX-c47b5dd9-287a-4e8b-a0da-dbaa70206cf4.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-c47b5dd9-287a-4e8b-a0da-dbaa70206cf4",
- "owner": {
- "substance": {
- "uuid": "XLSX-9f84408a-4414-33c9-a0f2-53bd19cf2d65"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "155",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "155",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Vortexing"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 10
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 10
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 2149
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c48f796c-2919-46a0-ab3a-19c23a9de14f.json b/test/data/enm/study-XLSX-c48f796c-2919-46a0-ab3a-19c23a9de14f.json
deleted file mode 100644
index 2c0c7ed..0000000
--- a/test/data/enm/study-XLSX-c48f796c-2919-46a0-ab3a-19c23a9de14f.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-c48f796c-2919-46a0-ab3a-19c23a9de14f",
- "owner": {
- "substance": {
- "uuid": "XLSX-5d07b463-d3a8-35b1-826e-076f9f2328c8"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "080",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "080",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Stirring",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 14.208
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 20.516
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.252
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c505007a-1cf7-4452-b2eb-3357e55905d0.json b/test/data/enm/study-XLSX-c505007a-1cf7-4452-b2eb-3357e55905d0.json
deleted file mode 100644
index f4585ec..0000000
--- a/test/data/enm/study-XLSX-c505007a-1cf7-4452-b2eb-3357e55905d0.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-c505007a-1cf7-4452-b2eb-3357e55905d0",
- "owner": {
- "substance": {
- "uuid": "XLSX-ce148a7f-3da2-3fb8-9245-161eb6747522"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "179",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1911_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1911",
- "title": "NPO_1911 MTT Assay"
- },
- "endpoint": "179",
- "guideline": [
- "MTT"
- ]
- },
- "parameters": {
- "Cell line": "NIH/3T3",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 240,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.051
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.401
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.014
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c52b866d-3b4d-4406-9124-b9dd0c30a32f.json b/test/data/enm/study-XLSX-c52b866d-3b4d-4406-9124-b9dd0c30a32f.json
deleted file mode 100644
index 96ef76f..0000000
--- a/test/data/enm/study-XLSX-c52b866d-3b4d-4406-9124-b9dd0c30a32f.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "XLSX-c52b866d-3b4d-4406-9124-b9dd0c30a32f",
- "owner": {
- "substance": {
- "uuid": "XLSX-ade46bc8-d87f-3f9b-afd0-11ca32e5caeb"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "178",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "178",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2/g",
- "loQualifier": ">=",
- "loValue": 14.5,
- "upQualifier": "<=",
- "upValue": 15.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c6bb8d8e-34ed-4fa9-8a94-95b2523ac084.json b/test/data/enm/study-XLSX-c6bb8d8e-34ed-4fa9-8a94-95b2523ac084.json
deleted file mode 100644
index 0b3bd2d..0000000
--- a/test/data/enm/study-XLSX-c6bb8d8e-34ed-4fa9-8a94-95b2523ac084.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-c6bb8d8e-34ed-4fa9-8a94-95b2523ac084",
- "owner": {
- "substance": {
- "uuid": "XLSX-0d71a921-0e8d-3f25-8deb-20478b7e884b"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "127",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "127",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "sphere"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c7dbbf47-202e-4aef-ac0d-55da281074b2.json b/test/data/enm/study-XLSX-c7dbbf47-202e-4aef-ac0d-55da281074b2.json
deleted file mode 100644
index 59d143e..0000000
--- a/test/data/enm/study-XLSX-c7dbbf47-202e-4aef-ac0d-55da281074b2.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-c7dbbf47-202e-4aef-ac0d-55da281074b2",
- "owner": {
- "substance": {
- "uuid": "XLSX-92788191-34d9-39b4-aa9c-503da51fc1a6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "134",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "134",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "espherical"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c801dfb0-b44b-406b-a89f-9a96c569c2a7.json b/test/data/enm/study-XLSX-c801dfb0-b44b-406b-a89f-9a96c569c2a7.json
deleted file mode 100644
index 85f5a2e..0000000
--- a/test/data/enm/study-XLSX-c801dfb0-b44b-406b-a89f-9a96c569c2a7.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "XLSX-c801dfb0-b44b-406b-a89f-9a96c569c2a7",
- "owner": {
- "substance": {
- "uuid": "XLSX-d4f2714a-a7f6-305a-af41-18d8129fef13"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "184",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "184",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Tip"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 16
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 40
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c831c8c7-d8df-48b6-be26-24aeab85871e.json b/test/data/enm/study-XLSX-c831c8c7-d8df-48b6-be26-24aeab85871e.json
deleted file mode 100644
index ca4f65d..0000000
--- a/test/data/enm/study-XLSX-c831c8c7-d8df-48b6-be26-24aeab85871e.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-c831c8c7-d8df-48b6-be26-24aeab85871e",
- "owner": {
- "substance": {
- "uuid": "XLSX-7d5a7a1b-5069-3256-b796-2361afcf3bfe"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "032",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "032",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 298
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c8c7f7a3-450b-4441-828f-721af78fdebd.json b/test/data/enm/study-XLSX-c8c7f7a3-450b-4441-828f-721af78fdebd.json
deleted file mode 100644
index e3e8383..0000000
--- a/test/data/enm/study-XLSX-c8c7f7a3-450b-4441-828f-721af78fdebd.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-c8c7f7a3-450b-4441-828f-721af78fdebd",
- "owner": {
- "substance": {
- "uuid": "XLSX-53ac37fa-9e10-3f71-9d74-bc47f28880ff"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "185",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "185",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": 40
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c9418c9d-3330-4495-882a-ea25e1480710.json b/test/data/enm/study-XLSX-c9418c9d-3330-4495-882a-ea25e1480710.json
deleted file mode 100644
index 0cb7649..0000000
--- a/test/data/enm/study-XLSX-c9418c9d-3330-4495-882a-ea25e1480710.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-c9418c9d-3330-4495-882a-ea25e1480710",
- "owner": {
- "substance": {
- "uuid": "XLSX-5d7807f7-a13b-392f-88af-fe7885a67502"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "170",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1911_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1911",
- "title": "NPO_1911 MTT Assay"
- },
- "endpoint": "170",
- "guideline": [
- "MTT"
- ]
- },
- "parameters": {
- "Cell line": "NIH/3T3",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 240,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.291
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.385
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.044
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c96f15d1-9601-4019-b878-cd25f10678a1.json b/test/data/enm/study-XLSX-c96f15d1-9601-4019-b878-cd25f10678a1.json
deleted file mode 100644
index c1c6c46..0000000
--- a/test/data/enm/study-XLSX-c96f15d1-9601-4019-b878-cd25f10678a1.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-c96f15d1-9601-4019-b878-cd25f10678a1",
- "owner": {
- "substance": {
- "uuid": "XLSX-498d791a-4c0f-3eab-bb2b-bd554637d9af"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "135",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "135",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NCI-H292",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 318.394
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1041.903
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 28.94
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c9c7dce2-9d8e-4f47-a93e-aac7c27f5f58.json b/test/data/enm/study-XLSX-c9c7dce2-9d8e-4f47-a93e-aac7c27f5f58.json
deleted file mode 100644
index 3980b8a..0000000
--- a/test/data/enm/study-XLSX-c9c7dce2-9d8e-4f47-a93e-aac7c27f5f58.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-c9c7dce2-9d8e-4f47-a93e-aac7c27f5f58",
- "owner": {
- "substance": {
- "uuid": "XLSX-de76fc02-ef1f-310a-b61f-6aab5b586412"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "116",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "116",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "NRK-52E",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 240.376
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 310.659
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2.811
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-c9d5a3c3-257e-41cf-a445-b6747c2f7fd2.json b/test/data/enm/study-XLSX-c9d5a3c3-257e-41cf-a445-b6747c2f7fd2.json
deleted file mode 100644
index c84e19e..0000000
--- a/test/data/enm/study-XLSX-c9d5a3c3-257e-41cf-a445-b6747c2f7fd2.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-c9d5a3c3-257e-41cf-a445-b6747c2f7fd2",
- "owner": {
- "substance": {
- "uuid": "XLSX-7e2b0550-595b-3427-b6f3-b84211a5c402"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "019",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "019",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Vortexing"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 14
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 15
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 95
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-ca32b798-cba0-4a0a-89cd-5eeebef7dafc.json b/test/data/enm/study-XLSX-ca32b798-cba0-4a0a-89cd-5eeebef7dafc.json
deleted file mode 100644
index 80e797d..0000000
--- a/test/data/enm/study-XLSX-ca32b798-cba0-4a0a-89cd-5eeebef7dafc.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-ca32b798-cba0-4a0a-89cd-5eeebef7dafc",
- "owner": {
- "substance": {
- "uuid": "XLSX-75ca4d9f-546f-3d7d-a24e-d0d54809cbb3"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "039",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "039",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "Entangled irregular, mostly bent, some no-onions "
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 125
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-ca6e4f24-b2f5-41c0-ad58-13bbfa3265ab.json b/test/data/enm/study-XLSX-ca6e4f24-b2f5-41c0-ad58-13bbfa3265ab.json
deleted file mode 100644
index a836507..0000000
--- a/test/data/enm/study-XLSX-ca6e4f24-b2f5-41c0-ad58-13bbfa3265ab.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-ca6e4f24-b2f5-41c0-ad58-13bbfa3265ab",
- "owner": {
- "substance": {
- "uuid": "XLSX-673c8355-a823-3bf2-a319-0d8af43e4d90"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "149",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "149",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Bath"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 21.8
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 41.2
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 268
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-caa33b31-8bb6-4f2b-a83c-1f11b0ad7da8.json b/test/data/enm/study-XLSX-caa33b31-8bb6-4f2b-a83c-1f11b0ad7da8.json
deleted file mode 100644
index a085383..0000000
--- a/test/data/enm/study-XLSX-caa33b31-8bb6-4f2b-a83c-1f11b0ad7da8.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-caa33b31-8bb6-4f2b-a83c-1f11b0ad7da8",
- "owner": {
- "substance": {
- "uuid": "XLSX-673c8355-a823-3bf2-a319-0d8af43e4d90"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "149",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "149",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 334.918
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1542.652
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 48.309
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-cae175fa-1f2f-4d52-8d0b-0af9747925ca.json b/test/data/enm/study-XLSX-cae175fa-1f2f-4d52-8d0b-0af9747925ca.json
deleted file mode 100644
index 62989c6..0000000
--- a/test/data/enm/study-XLSX-cae175fa-1f2f-4d52-8d0b-0af9747925ca.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-cae175fa-1f2f-4d52-8d0b-0af9747925ca",
- "owner": {
- "substance": {
- "uuid": "XLSX-9eb0db98-07c0-37fb-9fc3-7126d72252c4"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "131",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "131",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "sphere"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-cb77a276-f477-4d81-8823-5786a7014f6c.json b/test/data/enm/study-XLSX-cb77a276-f477-4d81-8823-5786a7014f6c.json
deleted file mode 100644
index a064514..0000000
--- a/test/data/enm/study-XLSX-cb77a276-f477-4d81-8823-5786a7014f6c.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "XLSX-cb77a276-f477-4d81-8823-5786a7014f6c",
- "owner": {
- "substance": {
- "uuid": "XLSX-5d7807f7-a13b-392f-88af-fe7885a67502"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "170",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "170",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2/g",
- "loQualifier": ">=",
- "loValue": 11.8,
- "upQualifier": "<=",
- "upValue": 13
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-cbb1aca6-72b7-4d98-b3c7-1e02bbe5323a.json b/test/data/enm/study-XLSX-cbb1aca6-72b7-4d98-b3c7-1e02bbe5323a.json
deleted file mode 100644
index e20ded5..0000000
--- a/test/data/enm/study-XLSX-cbb1aca6-72b7-4d98-b3c7-1e02bbe5323a.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-cbb1aca6-72b7-4d98-b3c7-1e02bbe5323a",
- "owner": {
- "substance": {
- "uuid": "XLSX-0d71a921-0e8d-3f25-8deb-20478b7e884b"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "126",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "126",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NRK-52E",
- "Dispersion protocol": "Stirring",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 113.814
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1244.237
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 45.217
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-cbe445cd-8bb9-49ef-bd3e-f3659f6bfb25.json b/test/data/enm/study-XLSX-cbe445cd-8bb9-49ef-bd3e-f3659f6bfb25.json
deleted file mode 100644
index 3c0a14c..0000000
--- a/test/data/enm/study-XLSX-cbe445cd-8bb9-49ef-bd3e-f3659f6bfb25.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-cbe445cd-8bb9-49ef-bd3e-f3659f6bfb25",
- "owner": {
- "substance": {
- "uuid": "XLSX-4ceef1bf-5f19-34e7-9d3d-51d65be297d7"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "171",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "171",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 21.552
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 43.757
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.888
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-cd5d66d7-ae58-4bab-af4d-56f29f986660.json b/test/data/enm/study-XLSX-cd5d66d7-ae58-4bab-af4d-56f29f986660.json
deleted file mode 100644
index 19ad8db..0000000
--- a/test/data/enm/study-XLSX-cd5d66d7-ae58-4bab-af4d-56f29f986660.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-cd5d66d7-ae58-4bab-af4d-56f29f986660",
- "owner": {
- "substance": {
- "uuid": "XLSX-295d65e6-0d6e-3987-a67f-e4482fa28c71"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "099",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "099",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": -39
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-cde8e68b-2c34-4b2b-967f-81fef93db218.json b/test/data/enm/study-XLSX-cde8e68b-2c34-4b2b-967f-81fef93db218.json
deleted file mode 100644
index d5ac41f..0000000
--- a/test/data/enm/study-XLSX-cde8e68b-2c34-4b2b-967f-81fef93db218.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-cde8e68b-2c34-4b2b-967f-81fef93db218",
- "owner": {
- "substance": {
- "uuid": "XLSX-5cd11301-7cf1-3402-aaf8-853e5ed8ccde"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "177",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "177",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NCI-H292",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4.27
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4.497
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.009
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-ce8d0524-da9e-4e33-8e53-79461ea52805.json b/test/data/enm/study-XLSX-ce8d0524-da9e-4e33-8e53-79461ea52805.json
deleted file mode 100644
index 0a6bd22..0000000
--- a/test/data/enm/study-XLSX-ce8d0524-da9e-4e33-8e53-79461ea52805.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-ce8d0524-da9e-4e33-8e53-79461ea52805",
- "owner": {
- "substance": {
- "uuid": "XLSX-c42f434e-6295-3715-8a23-ce26f87642a6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "188",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "188",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 294.088
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1462.866
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 46.751
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-cf6674db-0b52-4419-a840-63e21f5f79a3.json b/test/data/enm/study-XLSX-cf6674db-0b52-4419-a840-63e21f5f79a3.json
deleted file mode 100644
index 55d1c11..0000000
--- a/test/data/enm/study-XLSX-cf6674db-0b52-4419-a840-63e21f5f79a3.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-cf6674db-0b52-4419-a840-63e21f5f79a3",
- "owner": {
- "substance": {
- "uuid": "XLSX-de76fc02-ef1f-310a-b61f-6aab5b586412"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "117",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "117",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NRK-52E",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 223.098
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1154.73
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 37.265
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-d0f67857-85d3-4544-9efe-8dccb8f2f69b.json b/test/data/enm/study-XLSX-d0f67857-85d3-4544-9efe-8dccb8f2f69b.json
deleted file mode 100644
index d517951..0000000
--- a/test/data/enm/study-XLSX-d0f67857-85d3-4544-9efe-8dccb8f2f69b.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-d0f67857-85d3-4544-9efe-8dccb8f2f69b",
- "owner": {
- "substance": {
- "uuid": "XLSX-acb82e6d-63d6-3cf4-a796-a281b1ba835f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "010",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "010",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 55.73
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 163.182
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4.298
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-d23ad007-9b3d-4a16-b2c0-cdf4c2534c71.json b/test/data/enm/study-XLSX-d23ad007-9b3d-4a16-b2c0-cdf4c2534c71.json
deleted file mode 100644
index ca20c07..0000000
--- a/test/data/enm/study-XLSX-d23ad007-9b3d-4a16-b2c0-cdf4c2534c71.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-d23ad007-9b3d-4a16-b2c0-cdf4c2534c71",
- "owner": {
- "substance": {
- "uuid": "XLSX-f94651ce-fd32-3306-8f89-32ffdf533be9"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "158",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1911_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1911",
- "title": "NPO_1911 MTT Assay"
- },
- "endpoint": "158",
- "guideline": [
- "MTT"
- ]
- },
- "parameters": {
- "Cell line": "SH-SY5Y",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 3,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1903.353
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2354.616
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 18.051
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-d2c12e69-e474-495c-b4f0-c771e62e0859.json b/test/data/enm/study-XLSX-d2c12e69-e474-495c-b4f0-c771e62e0859.json
deleted file mode 100644
index 75825f0..0000000
--- a/test/data/enm/study-XLSX-d2c12e69-e474-495c-b4f0-c771e62e0859.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-d2c12e69-e474-495c-b4f0-c771e62e0859",
- "owner": {
- "substance": {
- "uuid": "XLSX-d7934c3e-9eac-34bc-8c60-4cf0c46e92a3"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "008",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "008",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 81.133
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 178.493
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 3.894
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-d363410d-1bc7-400d-8ce5-7c260ef0a9fd.json b/test/data/enm/study-XLSX-d363410d-1bc7-400d-8ce5-7c260ef0a9fd.json
deleted file mode 100644
index 70313de..0000000
--- a/test/data/enm/study-XLSX-d363410d-1bc7-400d-8ce5-7c260ef0a9fd.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-d363410d-1bc7-400d-8ce5-7c260ef0a9fd",
- "owner": {
- "substance": {
- "uuid": "XLSX-58c9f610-0fef-3009-8112-6ea05d863644"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "168",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "168",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "Mainly 2 euhedral morphologies: aspect ratio of 1 (20–250 nm and 400 nm) and 2:7,5 (50-350 nm)"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.68
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-d3a1c00c-e9db-4e87-9488-87655dbbb885.json b/test/data/enm/study-XLSX-d3a1c00c-e9db-4e87-9488-87655dbbb885.json
deleted file mode 100644
index 361be25..0000000
--- a/test/data/enm/study-XLSX-d3a1c00c-e9db-4e87-9488-87655dbbb885.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-d3a1c00c-e9db-4e87-9488-87655dbbb885",
- "owner": {
- "substance": {
- "uuid": "XLSX-945d75a3-50b7-3655-8979-376d39096378"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "031",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "031",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 436.79
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 23662.55
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 929.03
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-d4f527c0-325e-4eec-bf61-04093f1cc5d5.json b/test/data/enm/study-XLSX-d4f527c0-325e-4eec-bf61-04093f1cc5d5.json
deleted file mode 100644
index faf3af8..0000000
--- a/test/data/enm/study-XLSX-d4f527c0-325e-4eec-bf61-04093f1cc5d5.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-d4f527c0-325e-4eec-bf61-04093f1cc5d5",
- "owner": {
- "substance": {
- "uuid": "XLSX-f94651ce-fd32-3306-8f89-32ffdf533be9"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "160",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "160",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Tip"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 10
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 18
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 504.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-d5aff4d1-abdf-4f9c-8c37-cb64aae72229.json b/test/data/enm/study-XLSX-d5aff4d1-abdf-4f9c-8c37-cb64aae72229.json
deleted file mode 100644
index afd876a..0000000
--- a/test/data/enm/study-XLSX-d5aff4d1-abdf-4f9c-8c37-cb64aae72229.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-d5aff4d1-abdf-4f9c-8c37-cb64aae72229",
- "owner": {
- "substance": {
- "uuid": "XLSX-de76fc02-ef1f-310a-b61f-6aab5b586412"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "115",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "115",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 255.17
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 420.566
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 6.616
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-d5dd4e79-8943-47c2-92ba-329b306d0896.json b/test/data/enm/study-XLSX-d5dd4e79-8943-47c2-92ba-329b306d0896.json
deleted file mode 100644
index 4a44b1b..0000000
--- a/test/data/enm/study-XLSX-d5dd4e79-8943-47c2-92ba-329b306d0896.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-d5dd4e79-8943-47c2-92ba-329b306d0896",
- "owner": {
- "substance": {
- "uuid": "XLSX-36cbb933-ec3a-3d8b-b80f-0d5b6e76edc5"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "028",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "028",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2/g",
- "loValue": 3.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-d619e752-f81e-4a88-94e0-f2d9ad2ecc86.json b/test/data/enm/study-XLSX-d619e752-f81e-4a88-94e0-f2d9ad2ecc86.json
deleted file mode 100644
index 2f8c0f9..0000000
--- a/test/data/enm/study-XLSX-d619e752-f81e-4a88-94e0-f2d9ad2ecc86.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-d619e752-f81e-4a88-94e0-f2d9ad2ecc86",
- "owner": {
- "substance": {
- "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "072",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "072",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "U-87 MG",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 2,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 53.613
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 175.758
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4.886
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-d7614e23-9ea3-4475-ac89-6a75c3626a3a.json b/test/data/enm/study-XLSX-d7614e23-9ea3-4475-ac89-6a75c3626a3a.json
deleted file mode 100644
index 861bbdd..0000000
--- a/test/data/enm/study-XLSX-d7614e23-9ea3-4475-ac89-6a75c3626a3a.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-d7614e23-9ea3-4475-ac89-6a75c3626a3a",
- "owner": {
- "substance": {
- "uuid": "XLSX-58c9f610-0fef-3009-8112-6ea05d863644"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "168",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1911_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1911",
- "title": "NPO_1911 MTT Assay"
- },
- "endpoint": "168",
- "guideline": [
- "MTT"
- ]
- },
- "parameters": {
- "Cell line": "mES",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 240,
- "Serum concentration,%": 0.15
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 3.698
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 5.866
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.087
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-d76ebf13-274d-4bc2-930f-406c9486be2e.json b/test/data/enm/study-XLSX-d76ebf13-274d-4bc2-930f-406c9486be2e.json
deleted file mode 100644
index 2f56963..0000000
--- a/test/data/enm/study-XLSX-d76ebf13-274d-4bc2-930f-406c9486be2e.json
+++ /dev/null
@@ -1,56 +0,0 @@
-{
- "uuid": "XLSX-d76ebf13-274d-4bc2-930f-406c9486be2e",
- "owner": {
- "substance": {
- "uuid": "XLSX-ce148a7f-3da2-3fb8-9245-161eb6747522"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "179",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "179",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "m2/g",
- "loQualifier": ">=",
- "loValue": 14.5,
- "upQualifier": "<=",
- "upValue": 15.7
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-d8feb7dd-549e-4f70-a119-5d76055e0172.json b/test/data/enm/study-XLSX-d8feb7dd-549e-4f70-a119-5d76055e0172.json
deleted file mode 100644
index e218953..0000000
--- a/test/data/enm/study-XLSX-d8feb7dd-549e-4f70-a119-5d76055e0172.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-d8feb7dd-549e-4f70-a119-5d76055e0172",
- "owner": {
- "substance": {
- "uuid": "XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "061",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "061",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "U-87 MG",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4.727
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 20.401
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.627
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-dae320b7-859e-4d08-9c88-fb29d764f2f1.json b/test/data/enm/study-XLSX-dae320b7-859e-4d08-9c88-fb29d764f2f1.json
deleted file mode 100644
index 69b61a0..0000000
--- a/test/data/enm/study-XLSX-dae320b7-859e-4d08-9c88-fb29d764f2f1.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-dae320b7-859e-4d08-9c88-fb29d764f2f1",
- "owner": {
- "substance": {
- "uuid": "XLSX-295d65e6-0d6e-3987-a67f-e4482fa28c71"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "097",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "097",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "16HBE",
- "Dispersion protocol": "Stirring",
- "Exposure duration,h": 48,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 688.979
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1269.72
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 23.23
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-dbac069b-2183-4321-b2f7-cd528eeb7beb.json b/test/data/enm/study-XLSX-dbac069b-2183-4321-b2f7-cd528eeb7beb.json
deleted file mode 100644
index bdef34e..0000000
--- a/test/data/enm/study-XLSX-dbac069b-2183-4321-b2f7-cd528eeb7beb.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-dbac069b-2183-4321-b2f7-cd528eeb7beb",
- "owner": {
- "substance": {
- "uuid": "XLSX-5d07b463-d3a8-35b1-826e-076f9f2328c8"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "081",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "081",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "oblong"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 2.4
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-dbc66ad9-b950-431f-8e0b-e8a185bcfc5a.json b/test/data/enm/study-XLSX-dbc66ad9-b950-431f-8e0b-e8a185bcfc5a.json
deleted file mode 100644
index 81f4afe..0000000
--- a/test/data/enm/study-XLSX-dbc66ad9-b950-431f-8e0b-e8a185bcfc5a.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "XLSX-dbc66ad9-b950-431f-8e0b-e8a185bcfc5a",
- "owner": {
- "substance": {
- "uuid": "XLSX-53ac37fa-9e10-3f71-9d74-bc47f28880ff"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "185",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "185",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Tip"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 16
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 40
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-dee1d5a1-8ad8-4eaf-816d-7e87f3a657e9.json b/test/data/enm/study-XLSX-dee1d5a1-8ad8-4eaf-816d-7e87f3a657e9.json
deleted file mode 100644
index 519578a..0000000
--- a/test/data/enm/study-XLSX-dee1d5a1-8ad8-4eaf-816d-7e87f3a657e9.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-dee1d5a1-8ad8-4eaf-816d-7e87f3a657e9",
- "owner": {
- "substance": {
- "uuid": "XLSX-d7934c3e-9eac-34bc-8c60-4cf0c46e92a3"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "005",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "005",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 44.545
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 154.891
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 4.414
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-df2adeb2-8c2b-431b-8efc-c9da4985a976.json b/test/data/enm/study-XLSX-df2adeb2-8c2b-431b-8efc-c9da4985a976.json
deleted file mode 100644
index 829149d..0000000
--- a/test/data/enm/study-XLSX-df2adeb2-8c2b-431b-8efc-c9da4985a976.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-df2adeb2-8c2b-431b-8efc-c9da4985a976",
- "owner": {
- "substance": {
- "uuid": "XLSX-de76fc02-ef1f-310a-b61f-6aab5b586412"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "119",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "119",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 97.669
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 106.213
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.342
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-df2b7cc9-9440-4450-93b4-0b01cfbe0470.json b/test/data/enm/study-XLSX-df2b7cc9-9440-4450-93b4-0b01cfbe0470.json
deleted file mode 100644
index 5678a23..0000000
--- a/test/data/enm/study-XLSX-df2b7cc9-9440-4450-93b4-0b01cfbe0470.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-df2b7cc9-9440-4450-93b4-0b01cfbe0470",
- "owner": {
- "substance": {
- "uuid": "XLSX-498d791a-4c0f-3eab-bb2b-bd554637d9af"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "135",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "135",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Vortexing"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 8
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 12
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 532
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-df2f83d5-775f-4dd1-86f2-221bc53497ca.json b/test/data/enm/study-XLSX-df2f83d5-775f-4dd1-86f2-221bc53497ca.json
deleted file mode 100644
index 266df66..0000000
--- a/test/data/enm/study-XLSX-df2f83d5-775f-4dd1-86f2-221bc53497ca.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-df2f83d5-775f-4dd1-86f2-221bc53497ca",
- "owner": {
- "substance": {
- "uuid": "XLSX-945d75a3-50b7-3655-8979-376d39096378"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "029",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "029",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1025.671
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 24233.231
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 928.302
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-df6f1803-e1f2-46a5-8ad2-04aa026cb430.json b/test/data/enm/study-XLSX-df6f1803-e1f2-46a5-8ad2-04aa026cb430.json
deleted file mode 100644
index 9446809..0000000
--- a/test/data/enm/study-XLSX-df6f1803-e1f2-46a5-8ad2-04aa026cb430.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-df6f1803-e1f2-46a5-8ad2-04aa026cb430",
- "owner": {
- "substance": {
- "uuid": "XLSX-9f84408a-4414-33c9-a0f2-53bd19cf2d65"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "155",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "155",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "Irregular euhedral"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.36
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-e0924b3c-5b20-4c17-b35b-9d1487aaf32c.json b/test/data/enm/study-XLSX-e0924b3c-5b20-4c17-b35b-9d1487aaf32c.json
deleted file mode 100644
index 87b1ed9..0000000
--- a/test/data/enm/study-XLSX-e0924b3c-5b20-4c17-b35b-9d1487aaf32c.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "XLSX-e0924b3c-5b20-4c17-b35b-9d1487aaf32c",
- "owner": {
- "substance": {
- "uuid": "XLSX-75ca4d9f-546f-3d7d-a24e-d0d54809cbb3"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "039",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "039",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Vortexing"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 11
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 1372
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-e12f73c6-c0a0-43b6-b377-b8e4dcf5616c.json b/test/data/enm/study-XLSX-e12f73c6-c0a0-43b6-b377-b8e4dcf5616c.json
deleted file mode 100644
index 9486f37..0000000
--- a/test/data/enm/study-XLSX-e12f73c6-c0a0-43b6-b377-b8e4dcf5616c.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-e12f73c6-c0a0-43b6-b377-b8e4dcf5616c",
- "owner": {
- "substance": {
- "uuid": "XLSX-95020ff3-17ee-3889-8a9f-f2555dc4a930"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "004",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "004",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "average round but not as monodisperse"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-e1efd876-a5b6-47d6-9039-04f1b86cac77.json b/test/data/enm/study-XLSX-e1efd876-a5b6-47d6-9039-04f1b86cac77.json
deleted file mode 100644
index 94cec66..0000000
--- a/test/data/enm/study-XLSX-e1efd876-a5b6-47d6-9039-04f1b86cac77.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-e1efd876-a5b6-47d6-9039-04f1b86cac77",
- "owner": {
- "substance": {
- "uuid": "XLSX-5cd11301-7cf1-3402-aaf8-853e5ed8ccde"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "177",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "177",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "Mainly 2 euhedral morphologies: aspect ratio 1(20–250 nm) and aspect ratio 2:8.5 (10–450 nm)"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.68
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-e25fcdda-3935-448e-a5bf-31932f003ed4.json b/test/data/enm/study-XLSX-e25fcdda-3935-448e-a5bf-31932f003ed4.json
deleted file mode 100644
index 38e4478..0000000
--- a/test/data/enm/study-XLSX-e25fcdda-3935-448e-a5bf-31932f003ed4.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-e25fcdda-3935-448e-a5bf-31932f003ed4",
- "owner": {
- "substance": {
- "uuid": "XLSX-5d07b463-d3a8-35b1-826e-076f9f2328c8"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "081",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "081",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Stirring"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 5
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 12
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 129
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-e2d1e541-119d-48fd-811e-ef18a2f4611c.json b/test/data/enm/study-XLSX-e2d1e541-119d-48fd-811e-ef18a2f4611c.json
deleted file mode 100644
index e998db8..0000000
--- a/test/data/enm/study-XLSX-e2d1e541-119d-48fd-811e-ef18a2f4611c.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "XLSX-e2d1e541-119d-48fd-811e-ef18a2f4611c",
- "owner": {
- "substance": {
- "uuid": "XLSX-56c58705-05c6-304f-bb42-a3a328e06319"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "182",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "182",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Tip"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 106
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 178
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-e39305cf-0a69-4240-9f35-d79a2d429e40.json b/test/data/enm/study-XLSX-e39305cf-0a69-4240-9f35-d79a2d429e40.json
deleted file mode 100644
index c4b48e8..0000000
--- a/test/data/enm/study-XLSX-e39305cf-0a69-4240-9f35-d79a2d429e40.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-e39305cf-0a69-4240-9f35-d79a2d429e40",
- "owner": {
- "substance": {
- "uuid": "XLSX-251091e3-55d1-36b3-854c-d1933ec46461"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "027",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "027",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Vortexing"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 38.1
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 38.1
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 144
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-e3b26a17-3886-4b42-9f8b-51a75c92d549.json b/test/data/enm/study-XLSX-e3b26a17-3886-4b42-9f8b-51a75c92d549.json
deleted file mode 100644
index 74f4c2f..0000000
--- a/test/data/enm/study-XLSX-e3b26a17-3886-4b42-9f8b-51a75c92d549.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-e3b26a17-3886-4b42-9f8b-51a75c92d549",
- "owner": {
- "substance": {
- "uuid": "XLSX-36cbb933-ec3a-3d8b-b80f-0d5b6e76edc5"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "028",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "028",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": -43.8
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-e3b53d4c-5816-4555-93a5-638024e7e6cc.json b/test/data/enm/study-XLSX-e3b53d4c-5816-4555-93a5-638024e7e6cc.json
deleted file mode 100644
index c1f3ce0..0000000
--- a/test/data/enm/study-XLSX-e3b53d4c-5816-4555-93a5-638024e7e6cc.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-e3b53d4c-5816-4555-93a5-638024e7e6cc",
- "owner": {
- "substance": {
- "uuid": "XLSX-38666e26-8f8e-37a4-b97c-728a1e5aa0f2"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "038",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "038",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Tip"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 11
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 1372
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 191
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-e4d153a8-15a4-473b-a649-a8f173015876.json b/test/data/enm/study-XLSX-e4d153a8-15a4-473b-a649-a8f173015876.json
deleted file mode 100644
index 866add5..0000000
--- a/test/data/enm/study-XLSX-e4d153a8-15a4-473b-a649-a8f173015876.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-e4d153a8-15a4-473b-a649-a8f173015876",
- "owner": {
- "substance": {
- "uuid": "XLSX-d4f2714a-a7f6-305a-af41-18d8129fef13"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "184",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "184",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 47.76
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1484.384
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 57.465
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-e4ec31d9-12a2-492c-8912-6a1caf42d220.json b/test/data/enm/study-XLSX-e4ec31d9-12a2-492c-8912-6a1caf42d220.json
deleted file mode 100644
index 86a59bf..0000000
--- a/test/data/enm/study-XLSX-e4ec31d9-12a2-492c-8912-6a1caf42d220.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-e4ec31d9-12a2-492c-8912-6a1caf42d220",
- "owner": {
- "substance": {
- "uuid": "XLSX-4ceef1bf-5f19-34e7-9d3d-51d65be297d7"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "176",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "176",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Tip"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 101
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 170
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 285
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-e56d0702-5753-4c06-91bc-637bf5355ce3.json b/test/data/enm/study-XLSX-e56d0702-5753-4c06-91bc-637bf5355ce3.json
deleted file mode 100644
index a6cfff6..0000000
--- a/test/data/enm/study-XLSX-e56d0702-5753-4c06-91bc-637bf5355ce3.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-e56d0702-5753-4c06-91bc-637bf5355ce3",
- "owner": {
- "substance": {
- "uuid": "XLSX-38666e26-8f8e-37a4-b97c-728a1e5aa0f2"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "038",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "038",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "highly bend, entangled"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 125
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-e70a0515-81c5-49ef-b2e4-27897942675a.json b/test/data/enm/study-XLSX-e70a0515-81c5-49ef-b2e4-27897942675a.json
deleted file mode 100644
index 3126565..0000000
--- a/test/data/enm/study-XLSX-e70a0515-81c5-49ef-b2e4-27897942675a.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-e70a0515-81c5-49ef-b2e4-27897942675a",
- "owner": {
- "substance": {
- "uuid": "XLSX-673c8355-a823-3bf2-a319-0d8af43e4d90"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "147",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "147",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NRK-52E",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 928.524
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1222.908
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 11.775
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-e7aa3d69-db5c-4a6f-b562-22643a5eaae8.json b/test/data/enm/study-XLSX-e7aa3d69-db5c-4a6f-b562-22643a5eaae8.json
deleted file mode 100644
index 21edb20..0000000
--- a/test/data/enm/study-XLSX-e7aa3d69-db5c-4a6f-b562-22643a5eaae8.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-e7aa3d69-db5c-4a6f-b562-22643a5eaae8",
- "owner": {
- "substance": {
- "uuid": "XLSX-498d791a-4c0f-3eab-bb2b-bd554637d9af"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "135",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "135",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "Two structures found; type 1 show agglomerates in the 50–1500 nm range"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.524
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-e7dab684-dd3d-4054-a343-31706a073bf6.json b/test/data/enm/study-XLSX-e7dab684-dd3d-4054-a343-31706a073bf6.json
deleted file mode 100644
index 93a877e..0000000
--- a/test/data/enm/study-XLSX-e7dab684-dd3d-4054-a343-31706a073bf6.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-e7dab684-dd3d-4054-a343-31706a073bf6",
- "owner": {
- "substance": {
- "uuid": "XLSX-92788191-34d9-39b4-aa9c-503da51fc1a6"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "134",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1911_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1911",
- "title": "NPO_1911 MTT Assay"
- },
- "endpoint": "134",
- "guideline": [
- "MTT"
- ]
- },
- "parameters": {
- "Cell line": "SH-SY5Y",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1224.819
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1575.14
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 14.013
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-e85460d4-1d0a-4cdf-aea6-7025bca3a403.json b/test/data/enm/study-XLSX-e85460d4-1d0a-4cdf-aea6-7025bca3a403.json
deleted file mode 100644
index 7cab232..0000000
--- a/test/data/enm/study-XLSX-e85460d4-1d0a-4cdf-aea6-7025bca3a403.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-e85460d4-1d0a-4cdf-aea6-7025bca3a403",
- "owner": {
- "substance": {
- "uuid": "XLSX-0d71a921-0e8d-3f25-8deb-20478b7e884b"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "127",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "127",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Stirring",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 76.347
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 126.343
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-e899dba3-4875-4fb2-b752-6792181138b8.json b/test/data/enm/study-XLSX-e899dba3-4875-4fb2-b752-6792181138b8.json
deleted file mode 100644
index ec1885c..0000000
--- a/test/data/enm/study-XLSX-e899dba3-4875-4fb2-b752-6792181138b8.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-e899dba3-4875-4fb2-b752-6792181138b8",
- "owner": {
- "substance": {
- "uuid": "XLSX-d7934c3e-9eac-34bc-8c60-4cf0c46e92a3"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "008",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "008",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "round"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-e8f808ee-cc98-4134-93e3-88d313d6ac48.json b/test/data/enm/study-XLSX-e8f808ee-cc98-4134-93e3-88d313d6ac48.json
deleted file mode 100644
index dcf82ad..0000000
--- a/test/data/enm/study-XLSX-e8f808ee-cc98-4134-93e3-88d313d6ac48.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-e8f808ee-cc98-4134-93e3-88d313d6ac48",
- "owner": {
- "substance": {
- "uuid": "XLSX-adf890e9-3623-3a0e-b601-11f8e5e2f3cb"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "018",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "018",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "Heterogeneous (round, triangular or trapezium-like)"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-e9bee75e-8347-4f49-ab8d-f76ca4a4369c.json b/test/data/enm/study-XLSX-e9bee75e-8347-4f49-ab8d-f76ca4a4369c.json
deleted file mode 100644
index 22354e5..0000000
--- a/test/data/enm/study-XLSX-e9bee75e-8347-4f49-ab8d-f76ca4a4369c.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-e9bee75e-8347-4f49-ab8d-f76ca4a4369c",
- "owner": {
- "substance": {
- "uuid": "XLSX-251091e3-55d1-36b3-854c-d1933ec46461"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "027",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "027",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": -50.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-ea251475-184a-4090-982e-4923799e3041.json b/test/data/enm/study-XLSX-ea251475-184a-4090-982e-4923799e3041.json
deleted file mode 100644
index d4a33b3..0000000
--- a/test/data/enm/study-XLSX-ea251475-184a-4090-982e-4923799e3041.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-ea251475-184a-4090-982e-4923799e3041",
- "owner": {
- "substance": {
- "uuid": "XLSX-adf890e9-3623-3a0e-b601-11f8e5e2f3cb"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "017",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "017",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1300.946
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1655.991
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 14.202
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-ea63f4ea-7a65-4ecb-b51d-20ce01e6fe53.json b/test/data/enm/study-XLSX-ea63f4ea-7a65-4ecb-b51d-20ce01e6fe53.json
deleted file mode 100644
index 59cef1a..0000000
--- a/test/data/enm/study-XLSX-ea63f4ea-7a65-4ecb-b51d-20ce01e6fe53.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-ea63f4ea-7a65-4ecb-b51d-20ce01e6fe53",
- "owner": {
- "substance": {
- "uuid": "XLSX-5a273d77-e518-3523-b377-c06f08182be1"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "021",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "021",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 23.667
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 56.684
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.321
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-ec0d62b4-2359-45e0-a95e-11244769fae9.json b/test/data/enm/study-XLSX-ec0d62b4-2359-45e0-a95e-11244769fae9.json
deleted file mode 100644
index dfc1b16..0000000
--- a/test/data/enm/study-XLSX-ec0d62b4-2359-45e0-a95e-11244769fae9.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-ec0d62b4-2359-45e0-a95e-11244769fae9",
- "owner": {
- "substance": {
- "uuid": "XLSX-2ca46b71-491d-3e73-9b4c-3fb885705274"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "157",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "157",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NCI-H292",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 446.864
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 645.017
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 7.926
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-ece2773f-4857-423d-8c0c-ad76ae1017f7.json b/test/data/enm/study-XLSX-ece2773f-4857-423d-8c0c-ad76ae1017f7.json
deleted file mode 100644
index 1f6f8b1..0000000
--- a/test/data/enm/study-XLSX-ece2773f-4857-423d-8c0c-ad76ae1017f7.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-ece2773f-4857-423d-8c0c-ad76ae1017f7",
- "owner": {
- "substance": {
- "uuid": "XLSX-9eb0db98-07c0-37fb-9fc3-7126d72252c4"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "129",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "129",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "HaCaT",
- "Dispersion protocol": "Stirring",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 37.78
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 69.956
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.287
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-ee08efeb-a88d-46ec-95df-27b6ed5a4039.json b/test/data/enm/study-XLSX-ee08efeb-a88d-46ec-95df-27b6ed5a4039.json
deleted file mode 100644
index d24c928..0000000
--- a/test/data/enm/study-XLSX-ee08efeb-a88d-46ec-95df-27b6ed5a4039.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-ee08efeb-a88d-46ec-95df-27b6ed5a4039",
- "owner": {
- "substance": {
- "uuid": "XLSX-d3a9ce39-6c15-3e4b-a5ce-5ea23e45ff16"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "112",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "112",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 235.704
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 328.548
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 3.714
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-ee2950ad-e9ac-487f-990d-3846eaa6b868.json b/test/data/enm/study-XLSX-ee2950ad-e9ac-487f-990d-3846eaa6b868.json
deleted file mode 100644
index c8bc13d..0000000
--- a/test/data/enm/study-XLSX-ee2950ad-e9ac-487f-990d-3846eaa6b868.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-ee2950ad-e9ac-487f-990d-3846eaa6b868",
- "owner": {
- "substance": {
- "uuid": "XLSX-0bfa2e41-c6b6-3cbf-8a1e-73bf006768ab"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "026",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "026",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "round"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-ee3baded-7a60-49e2-b637-3fb4c2dc8bd7.json b/test/data/enm/study-XLSX-ee3baded-7a60-49e2-b637-3fb4c2dc8bd7.json
deleted file mode 100644
index 4624ad0..0000000
--- a/test/data/enm/study-XLSX-ee3baded-7a60-49e2-b637-3fb4c2dc8bd7.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-ee3baded-7a60-49e2-b637-3fb4c2dc8bd7",
- "owner": {
- "substance": {
- "uuid": "XLSX-adf890e9-3623-3a0e-b601-11f8e5e2f3cb"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "018",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "018",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 64.046
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 90.535
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1.06
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-ef088215-e743-4bfd-a737-4a9261aac339.json b/test/data/enm/study-XLSX-ef088215-e743-4bfd-a737-4a9261aac339.json
deleted file mode 100644
index 4ab699c..0000000
--- a/test/data/enm/study-XLSX-ef088215-e743-4bfd-a737-4a9261aac339.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-ef088215-e743-4bfd-a737-4a9261aac339",
- "owner": {
- "substance": {
- "uuid": "XLSX-f94651ce-fd32-3306-8f89-32ffdf533be9"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "160",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "160",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": 9.96
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-f0db0761-938a-43ac-b04d-612a09131d63.json b/test/data/enm/study-XLSX-f0db0761-938a-43ac-b04d-612a09131d63.json
deleted file mode 100644
index 0b0e5f6..0000000
--- a/test/data/enm/study-XLSX-f0db0761-938a-43ac-b04d-612a09131d63.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-f0db0761-938a-43ac-b04d-612a09131d63",
- "owner": {
- "substance": {
- "uuid": "XLSX-adf890e9-3623-3a0e-b601-11f8e5e2f3cb"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "014",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "014",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 59.445
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 297.41
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 9.519
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-f1aa6695-5545-4b13-95fd-614629bfe92b.json b/test/data/enm/study-XLSX-f1aa6695-5545-4b13-95fd-614629bfe92b.json
deleted file mode 100644
index 281ed2c..0000000
--- a/test/data/enm/study-XLSX-f1aa6695-5545-4b13-95fd-614629bfe92b.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-f1aa6695-5545-4b13-95fd-614629bfe92b",
- "owner": {
- "substance": {
- "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "067",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0010001_SECTION",
- "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001",
- "title": "BAO_0010001 ATP Assay"
- },
- "endpoint": "067",
- "guideline": [
- "ATP"
- ]
- },
- "parameters": {
- "Cell line": "SK-OV-3",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 106.577
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 444.732
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 13.526
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-f1d098ec-d929-4410-a1af-f720036f834d.json b/test/data/enm/study-XLSX-f1d098ec-d929-4410-a1af-f720036f834d.json
deleted file mode 100644
index 24cb8a5..0000000
--- a/test/data/enm/study-XLSX-f1d098ec-d929-4410-a1af-f720036f834d.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-f1d098ec-d929-4410-a1af-f720036f834d",
- "owner": {
- "substance": {
- "uuid": "XLSX-7394378e-b717-3418-a3f7-27db3cbbd8d0"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "033",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "033",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 390.72
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 3988.011
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 143.892
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-f2524359-9748-4797-95f8-9064b832b153.json b/test/data/enm/study-XLSX-f2524359-9748-4797-95f8-9064b832b153.json
deleted file mode 100644
index cb98d56..0000000
--- a/test/data/enm/study-XLSX-f2524359-9748-4797-95f8-9064b832b153.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-f2524359-9748-4797-95f8-9064b832b153",
- "owner": {
- "substance": {
- "uuid": "XLSX-d3a9ce39-6c15-3e4b-a5ce-5ea23e45ff16"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "113",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "113",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "(m2/g)",
- "loValue": 189.16
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-f3369e08-9403-44dd-b930-7e6ad8debaa8.json b/test/data/enm/study-XLSX-f3369e08-9403-44dd-b930-7e6ad8debaa8.json
deleted file mode 100644
index c11d851..0000000
--- a/test/data/enm/study-XLSX-f3369e08-9403-44dd-b930-7e6ad8debaa8.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "XLSX-f3369e08-9403-44dd-b930-7e6ad8debaa8",
- "owner": {
- "substance": {
- "uuid": "XLSX-a44564c5-1458-3e3b-aca7-d63f5221d2a8"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "183",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "183",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Tip"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 106
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 178
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-f34d9633-f73f-454a-91ea-ef756cb9ade4.json b/test/data/enm/study-XLSX-f34d9633-f73f-454a-91ea-ef756cb9ade4.json
deleted file mode 100644
index 026cfa6..0000000
--- a/test/data/enm/study-XLSX-f34d9633-f73f-454a-91ea-ef756cb9ade4.json
+++ /dev/null
@@ -1,72 +0,0 @@
-{
- "uuid": "XLSX-f34d9633-f73f-454a-91ea-ef756cb9ade4",
- "owner": {
- "substance": {
- "uuid": "XLSX-2ca46b71-491d-3e73-9b4c-3fb885705274"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "157",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "157",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Vortexing"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 100
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 100
- }
- },
- {
- "endpoint": "SIZE IN SITU",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 465
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-f39a60aa-b599-4d09-b344-2b6480f14720.json b/test/data/enm/study-XLSX-f39a60aa-b599-4d09-b344-2b6480f14720.json
deleted file mode 100644
index 5c49c65..0000000
--- a/test/data/enm/study-XLSX-f39a60aa-b599-4d09-b344-2b6480f14720.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-f39a60aa-b599-4d09-b344-2b6480f14720",
- "owner": {
- "substance": {
- "uuid": "XLSX-190fb54d-9b65-3d58-b65e-b3aae9a1f182"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "154",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "154",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "Irregular euhedral"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.36
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-f40c9a22-a2d2-410b-99d2-fec1b44bcf0a.json b/test/data/enm/study-XLSX-f40c9a22-a2d2-410b-99d2-fec1b44bcf0a.json
deleted file mode 100644
index 503e399..0000000
--- a/test/data/enm/study-XLSX-f40c9a22-a2d2-410b-99d2-fec1b44bcf0a.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-f40c9a22-a2d2-410b-99d2-fec1b44bcf0a",
- "owner": {
- "substance": {
- "uuid": "XLSX-3ff81e94-3d5d-3e58-a761-b0bd7c94de3b"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "106",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "106",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Vortexing",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 76.229
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 143.961
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2.709
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-f4aabeaa-a7f4-4dfe-ab3b-f554a313d175.json b/test/data/enm/study-XLSX-f4aabeaa-a7f4-4dfe-ab3b-f554a313d175.json
deleted file mode 100644
index 3bb4e42..0000000
--- a/test/data/enm/study-XLSX-f4aabeaa-a7f4-4dfe-ab3b-f554a313d175.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-f4aabeaa-a7f4-4dfe-ab3b-f554a313d175",
- "owner": {
- "substance": {
- "uuid": "XLSX-3dac4f9c-8c47-3085-9781-e70583adb12f"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "167",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "167",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "Mainly 2 euhedral morphologies: aspect ratio of 1 (20–250 nm and 400 nm) and 2:7,5 (50-350 nm)"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.68
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-f4ba2094-beba-4eb3-9a75-1d0955c3af17.json b/test/data/enm/study-XLSX-f4ba2094-beba-4eb3-9a75-1d0955c3af17.json
deleted file mode 100644
index f47e11c..0000000
--- a/test/data/enm/study-XLSX-f4ba2094-beba-4eb3-9a75-1d0955c3af17.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-f4ba2094-beba-4eb3-9a75-1d0955c3af17",
- "owner": {
- "substance": {
- "uuid": "XLSX-5e44448d-216f-3b91-891a-a7e1de030a13"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "186",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "186",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "equi-axed and rounded, or slightly elongated"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.6
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-f5800c94-652b-419f-b812-9446748af04c.json b/test/data/enm/study-XLSX-f5800c94-652b-419f-b812-9446748af04c.json
deleted file mode 100644
index 8a66be0..0000000
--- a/test/data/enm/study-XLSX-f5800c94-652b-419f-b812-9446748af04c.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-f5800c94-652b-419f-b812-9446748af04c",
- "owner": {
- "substance": {
- "uuid": "XLSX-2acfa382-5109-3e49-9fd4-ef8d139be4b2"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "103",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "103",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": -40
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-f596b79d-58bd-4c59-8255-cb51aa2ffbec.json b/test/data/enm/study-XLSX-f596b79d-58bd-4c59-8255-cb51aa2ffbec.json
deleted file mode 100644
index 5567eca..0000000
--- a/test/data/enm/study-XLSX-f596b79d-58bd-4c59-8255-cb51aa2ffbec.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-f596b79d-58bd-4c59-8255-cb51aa2ffbec",
- "owner": {
- "substance": {
- "uuid": "XLSX-d3a9ce39-6c15-3e4b-a5ce-5ea23e45ff16"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "113",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "113",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": -47.5
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-f5ba28f1-d236-415d-af07-6ffe7b15585e.json b/test/data/enm/study-XLSX-f5ba28f1-d236-415d-af07-6ffe7b15585e.json
deleted file mode 100644
index 026de90..0000000
--- a/test/data/enm/study-XLSX-f5ba28f1-d236-415d-af07-6ffe7b15585e.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-f5ba28f1-d236-415d-af07-6ffe7b15585e",
- "owner": {
- "substance": {
- "uuid": "XLSX-adf890e9-3623-3a0e-b601-11f8e5e2f3cb"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "013",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "013",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 1486.452
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2076.856
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 23.616
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-f61dd9c6-563c-40a5-8fcc-52c9f4ad7590.json b/test/data/enm/study-XLSX-f61dd9c6-563c-40a5-8fcc-52c9f4ad7590.json
deleted file mode 100644
index b40be7e..0000000
--- a/test/data/enm/study-XLSX-f61dd9c6-563c-40a5-8fcc-52c9f4ad7590.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-f61dd9c6-563c-40a5-8fcc-52c9f4ad7590",
- "owner": {
- "substance": {
- "uuid": "XLSX-3ff81e94-3d5d-3e58-a761-b0bd7c94de3b"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "107",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "107",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": -40
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-f680f3e9-24d8-482c-ac04-0ee2884348a4.json b/test/data/enm/study-XLSX-f680f3e9-24d8-482c-ac04-0ee2884348a4.json
deleted file mode 100644
index 4752975..0000000
--- a/test/data/enm/study-XLSX-f680f3e9-24d8-482c-ac04-0ee2884348a4.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-f680f3e9-24d8-482c-ac04-0ee2884348a4",
- "owner": {
- "substance": {
- "uuid": "XLSX-945d75a3-50b7-3655-8979-376d39096378"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "031",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "031",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "highly bend"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 79
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-f752a9e6-816d-4d83-8211-55fef5b0d24e.json b/test/data/enm/study-XLSX-f752a9e6-816d-4d83-8211-55fef5b0d24e.json
deleted file mode 100644
index bef2887..0000000
--- a/test/data/enm/study-XLSX-f752a9e6-816d-4d83-8211-55fef5b0d24e.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-f752a9e6-816d-4d83-8211-55fef5b0d24e",
- "owner": {
- "substance": {
- "uuid": "XLSX-0d71a921-0e8d-3f25-8deb-20478b7e884b"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "127",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ZETA_POTENTIAL_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1302",
- "title": "4.29 Nanomaterial zeta potential"
- },
- "endpoint": "127",
- "guideline": [
- "Zeta Potential"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "ZETA POTENTIAL",
- "conditions": {
- },
- "result": {
- "unit": "mV",
- "loValue": -32
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-f861ae7e-cfc8-4406-b8c1-2bab45c9be8f.json b/test/data/enm/study-XLSX-f861ae7e-cfc8-4406-b8c1-2bab45c9be8f.json
deleted file mode 100644
index eab22f8..0000000
--- a/test/data/enm/study-XLSX-f861ae7e-cfc8-4406-b8c1-2bab45c9be8f.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-f861ae7e-cfc8-4406-b8c1-2bab45c9be8f",
- "owner": {
- "substance": {
- "uuid": "XLSX-190fb54d-9b65-3d58-b65e-b3aae9a1f182"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "154",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "154",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 99
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-f9dc91ff-8f1d-4f73-962d-30cc1fe31699.json b/test/data/enm/study-XLSX-f9dc91ff-8f1d-4f73-962d-30cc1fe31699.json
deleted file mode 100644
index 10e4ba0..0000000
--- a/test/data/enm/study-XLSX-f9dc91ff-8f1d-4f73-962d-30cc1fe31699.json
+++ /dev/null
@@ -1,696 +0,0 @@
-{
- "uuid": "XLSX-f9dc91ff-8f1d-4f73-962d-30cc1fe31699",
- "owner": {
- "substance": {
- "uuid": "XLSX-aacdfad8-f3d3-39f2-b662-0d8084e283ef"
- },
- "company": {
- "uuid": "XLSX-4bb81f08-059d-32ad-b5fd-71c6bcc6e0db",
- "name": "FP7 MARINA"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1371/journal.pone.0127174",
- "year": "2015",
- "owner": "P32 - KI"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002993_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002993",
- "title": "BAO_0002993 Cytotoxicity Assay"
- },
- "endpoint": "",
- "guideline": [
- "ELISA / TNF-α release in culture medium"
- ]
- },
- "parameters": {
- "CHMO:0002774": "Y",
- "CLO_0000031": "HMDM (primary cells)",
- "CLO_0000031 EFO_0004443": "ATCC",
- "Cell culture conditions - Serum": "FBS (Gibco/413105K) ",
- "Cell culture conditions - Serum concentration in growth medium": 0.1,
- "Cell culture conditions - Serum concentration in treatment medium": 0.1,
- "Cell line/Type - Full name": "human monocyte-derived macrophages (HMDM)",
- "Dispersion agent": "water with 0,05% BSA",
- "NPO_1952": "N",
- "NPO_1961": "N",
- "NPO_1969 OBI_0000272": "NANOGENOTOX Dispersion protocol (http://www.nanogenotox.eu/files/PDF/web%20nanogenotox%20dispersion%20protocol.pdf) ",
- "OBI_0001911 BAO_0000114": "RPMI (Sigma, RNBB2729 "
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 3.092
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 28.881
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 16.978
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 6.298
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 1.61
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 1.562
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 1.905
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 10.723
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 0.874
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 2.347
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 3.396
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 4.599
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 9.392
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 13.846
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 15.77
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 13.103
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 9.147
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 19.641
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 21.956
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 31.124
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 24.944
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 18.364
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 16.807
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 10.86
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 21.04
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 18.135
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 22.527
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 29.266
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 29.534
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 25.48
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 22.79
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 21.142
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-f9df1a98-6f38-473a-a70f-80dcdf8fa5be.json b/test/data/enm/study-XLSX-f9df1a98-6f38-473a-a70f-80dcdf8fa5be.json
deleted file mode 100644
index e882c76..0000000
--- a/test/data/enm/study-XLSX-f9df1a98-6f38-473a-a70f-80dcdf8fa5be.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-f9df1a98-6f38-473a-a70f-80dcdf8fa5be",
- "owner": {
- "substance": {
- "uuid": "XLSX-7e2b0550-595b-3427-b6f3-b84211a5c402"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "019",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "ASPECT_RATIO_SHAPE_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_274",
- "title": "4.27 Nanomaterial aspect ratio/shape"
- },
- "endpoint": "019",
- "guideline": [
- "Shape"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": "Mainly euhedral (some elongated or sub-spherical)"
- },
- "effects": [
- {
- "endpoint": "ASPECT RATIO",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 1.1
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-fa433d53-df49-4420-854a-fd59b58d39c5.json b/test/data/enm/study-XLSX-fa433d53-df49-4420-854a-fd59b58d39c5.json
deleted file mode 100644
index 8e60348..0000000
--- a/test/data/enm/study-XLSX-fa433d53-df49-4420-854a-fd59b58d39c5.json
+++ /dev/null
@@ -1,696 +0,0 @@
-{
- "uuid": "XLSX-fa433d53-df49-4420-854a-fd59b58d39c5",
- "owner": {
- "substance": {
- "uuid": "XLSX-ffd24485-3b05-3afe-b6ff-547800723f71"
- },
- "company": {
- "uuid": "XLSX-4bb81f08-059d-32ad-b5fd-71c6bcc6e0db",
- "name": "FP7 MARINA"
- }
- },
- "citation": {
- "title": "http://dx.doi.org/10.1371/journal.pone.0127174",
- "year": "2015",
- "owner": "P32 - KI"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0002993_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0002993",
- "title": "BAO_0002993 Cytotoxicity Assay"
- },
- "endpoint": "",
- "guideline": [
- "ELISA / TNF-α release in culture medium"
- ]
- },
- "parameters": {
- "CHMO:0002774": "Y",
- "CLO_0000031": "HMDM (primary cells)",
- "CLO_0000031 EFO_0004443": "ATCC",
- "Cell culture conditions - Serum": "FBS (Gibco/413105K) ",
- "Cell culture conditions - Serum concentration in growth medium": 0.1,
- "Cell culture conditions - Serum concentration in treatment medium": 0.1,
- "Cell line/Type - Full name": "human monocyte-derived macrophages (HMDM)",
- "Dispersion agent": "water with 0,05% BSA",
- "NPO_1952": "N",
- "NPO_1961": "N",
- "NPO_1969 OBI_0000272": "NANOGENOTOX Dispersion protocol (http://www.nanogenotox.eu/files/PDF/web%20nanogenotox%20dispersion%20protocol.pdf) ",
- "OBI_0001911 BAO_0000114": "RPMI (Sigma, RNBB2729 "
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 1.893
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 18.514
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 18.428
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 15.693
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 16.034
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 16.45
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 16.752
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 1",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 16.306
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": -0.343
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 11.593
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 8.816
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 6.91
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 5.42
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 5.461
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 6.527
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 2",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 0.599
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 2.189
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 3.195
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 2.978
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 1.9
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 2.014
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 1.952
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 1.467
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 3",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 0.401
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 0,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 9.502
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 1,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 7.576
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 5,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 7.826
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 10,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 10.336
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 25,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 10.84
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 50,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 10.924
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 75,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 11.36
- }
- },
- {
- "endpoint": "TNF-α (ng/ml)",
- "conditions": {
- "Concentration": {
- "loQualifier": "=",
- "loValue": 100,
- "unit": "µg/ml"
- },
- "Replicate": "Replicate 4",
- "Time point": {
- "loQualifier": "=",
- "loValue": 24,
- "unit": "h"
- }
- },
- "result": {
- "unit": "ng/ml",
- "loValue": 7.389
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-fb1ee400-bfaa-4ac1-bd6f-801e8ead9842.json b/test/data/enm/study-XLSX-fb1ee400-bfaa-4ac1-bd6f-801e8ead9842.json
deleted file mode 100644
index c9a8046..0000000
--- a/test/data/enm/study-XLSX-fb1ee400-bfaa-4ac1-bd6f-801e8ead9842.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-fb1ee400-bfaa-4ac1-bd6f-801e8ead9842",
- "owner": {
- "substance": {
- "uuid": "XLSX-673c8355-a823-3bf2-a319-0d8af43e4d90"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "148",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1709_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1709",
- "title": "NPO_1709 LDH Release Assay"
- },
- "endpoint": "148",
- "guideline": [
- "LDH"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 223.966
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 310.968
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 3.48
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-fd583dba-17af-4d5d-b33b-99bc223cacb0.json b/test/data/enm/study-XLSX-fd583dba-17af-4d5d-b33b-99bc223cacb0.json
deleted file mode 100644
index a21852f..0000000
--- a/test/data/enm/study-XLSX-fd583dba-17af-4d5d-b33b-99bc223cacb0.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-fd583dba-17af-4d5d-b33b-99bc223cacb0",
- "owner": {
- "substance": {
- "uuid": "XLSX-9f84408a-4414-33c9-a0f2-53bd19cf2d65"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "155",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "155",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": null,
- "loValue": 84
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-fd6f9dd1-b20f-45bc-95e1-e9aa08913cd1.json b/test/data/enm/study-XLSX-fd6f9dd1-b20f-45bc-95e1-e9aa08913cd1.json
deleted file mode 100644
index 58ba7a9..0000000
--- a/test/data/enm/study-XLSX-fd6f9dd1-b20f-45bc-95e1-e9aa08913cd1.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-fd6f9dd1-b20f-45bc-95e1-e9aa08913cd1",
- "owner": {
- "substance": {
- "uuid": "XLSX-7677801c-4895-3ffd-807a-832c589341df"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "151",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "NPO_1911_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1911",
- "title": "NPO_1911 MTT Assay"
- },
- "endpoint": "151",
- "guideline": [
- "MTT"
- ]
- },
- "parameters": {
- "Cell line": "NIH/3T3",
- "Dispersion protocol": "Bath",
- "Exposure duration,h": 144,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 49.906
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 107.192
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2.291
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-fdcbf34a-59a7-4533-beab-0a38696cd639.json b/test/data/enm/study-XLSX-fdcbf34a-59a7-4533-beab-0a38696cd639.json
deleted file mode 100644
index 52b6eb3..0000000
--- a/test/data/enm/study-XLSX-fdcbf34a-59a7-4533-beab-0a38696cd639.json
+++ /dev/null
@@ -1,53 +0,0 @@
-{
- "uuid": "XLSX-fdcbf34a-59a7-4533-beab-0a38696cd639",
- "owner": {
- "substance": {
- "uuid": "XLSX-7394378e-b717-3418-a3f7-27db3cbbd8d0"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "035",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "SPECIFIC_SURFACE_AREA_SECTION",
- "term": "http://purl.bioontology.org/ontology/npo#NPO_1235",
- "title": "4.28 Nanomaterial specific surface area"
- },
- "endpoint": "035",
- "guideline": [
- "SPECIFIC SURFACE AREA"
- ]
- },
- "parameters": {
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "SPECIFIC_SURFACE_AREA",
- "conditions": {
- },
- "result": {
- "unit": "(m2/g)",
- "loValue": 140.46
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-fe6bb3ce-f1ea-4e4f-a781-9c4b439e5887.json b/test/data/enm/study-XLSX-fe6bb3ce-f1ea-4e4f-a781-9c4b439e5887.json
deleted file mode 100644
index 0cecd13..0000000
--- a/test/data/enm/study-XLSX-fe6bb3ce-f1ea-4e4f-a781-9c4b439e5887.json
+++ /dev/null
@@ -1,63 +0,0 @@
-{
- "uuid": "XLSX-fe6bb3ce-f1ea-4e4f-a781-9c4b439e5887",
- "owner": {
- "substance": {
- "uuid": "XLSX-5e44448d-216f-3b91-891a-a7e1de030a13"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "186",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "P-CHEM",
- "category": {
- "code": "PC_GRANULOMETRY_SECTION",
- "term": "http://purl.obolibrary.org/obo/CHMO_0002119",
- "title": "4.5 Particle size distribution (Granulometry)"
- },
- "endpoint": "186",
- "guideline": [
- "TEM"
- ]
- },
- "parameters": {
- "Dispersion protocol": "Tip"
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "PRIMARY SIZE 1ST DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 14
- }
- },
- {
- "endpoint": "PRIMARY SIZE 2ND DIMENSION",
- "conditions": {
- },
- "result": {
- "unit": "nm",
- "loValue": 22
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-fe7ed13c-9071-4a3d-88b6-1b105fd5ca70.json b/test/data/enm/study-XLSX-fe7ed13c-9071-4a3d-88b6-1b105fd5ca70.json
deleted file mode 100644
index e457e48..0000000
--- a/test/data/enm/study-XLSX-fe7ed13c-9071-4a3d-88b6-1b105fd5ca70.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-fe7ed13c-9071-4a3d-88b6-1b105fd5ca70",
- "owner": {
- "substance": {
- "uuid": "XLSX-4ceef1bf-5f19-34e7-9d3d-51d65be297d7"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "172",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "172",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "A549",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 16.938
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 25.747
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.352
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-fe85de6c-5b0e-4ea1-8eeb-72d706db95a8.json b/test/data/enm/study-XLSX-fe85de6c-5b0e-4ea1-8eeb-72d706db95a8.json
deleted file mode 100644
index 58a8b44..0000000
--- a/test/data/enm/study-XLSX-fe85de6c-5b0e-4ea1-8eeb-72d706db95a8.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-fe85de6c-5b0e-4ea1-8eeb-72d706db95a8",
- "owner": {
- "substance": {
- "uuid": "XLSX-4ceef1bf-5f19-34e7-9d3d-51d65be297d7"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "174",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "174",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "NRK-52E",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 2.322
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 3.225
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.036
- }
- }
- ]
-}
diff --git a/test/data/enm/study-XLSX-fff71a73-f25e-4783-8660-bdb3aa52cd47.json b/test/data/enm/study-XLSX-fff71a73-f25e-4783-8660-bdb3aa52cd47.json
deleted file mode 100644
index 0844963..0000000
--- a/test/data/enm/study-XLSX-fff71a73-f25e-4783-8660-bdb3aa52cd47.json
+++ /dev/null
@@ -1,75 +0,0 @@
-{
- "uuid": "XLSX-fff71a73-f25e-4783-8660-bdb3aa52cd47",
- "owner": {
- "substance": {
- "uuid": "XLSX-4ceef1bf-5f19-34e7-9d3d-51d65be297d7"
- },
- "company": {
- "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632",
- "name": "MODENA"
- }
- },
- "citation": {
- "title": "176",
- "year": "2015",
- "owner": "MODENA"
- },
- "protocol": {
- "topcategory": "TOX",
- "category": {
- "code": "BAO_0003009_SECTION",
- "term": "http://www.bioassayontology.org/bao#BAO_0003009",
- "title": "BAO_0003009 Cell Viability Assay"
- },
- "endpoint": "176",
- "guideline": [
- "WST-1"
- ]
- },
- "parameters": {
- "Cell line": "THP-1 macrophage",
- "Dispersion protocol": "Tip",
- "Exposure duration,h": 24,
- "Serum concentration,%": 0.1
- },
- "reliability": {
- "r_isRobustStudy": "false",
- "r_isUsedforClassification": "false",
- "r_isUsedforMSDS": "false",
- "r_purposeFlag": null,
- "r_studyResultType": "experimental result",
- "r_value": null
- },
- "interpretation": {
- "result": null
- },
- "effects": [
- {
- "endpoint": "EC25",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 10.218
- }
- },
- {
- "endpoint": "EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 15.137
- }
- },
- {
- "endpoint": "SLOPE EC50",
- "conditions": {
- },
- "result": {
- "unit": "ug/ml",
- "loValue": 0.197
- }
- }
- ]
-}
diff --git a/test/model-nanoparticle.rb b/test/model-nanoparticle.rb
index 7fb944e..8dc6830 100644
--- a/test/model-nanoparticle.rb
+++ b/test/model-nanoparticle.rb
@@ -5,10 +5,6 @@ class NanoparticleModelTest < MiniTest::Test
def setup
@training_dataset = Dataset.where(:name => "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles").first
- unless @training_dataset
- Import::Enanomapper.import File.join(File.dirname(__FILE__),"data","enm")
- @training_dataset = Dataset.where(name: "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles").first
- end
@prediction_feature = @training_dataset.features.select{|f| f["name"] == 'log2(Net cell association)'}.first
end
@@ -50,6 +46,7 @@ class NanoparticleModelTest < MiniTest::Test
refute_empty model.independent_variables
assert_equal "Algorithm::Caret.rf", model.algorithms[:prediction][:method]
assert_equal "Algorithm::Similarity.tanimoto", model.algorithms[:similarity][:method]
+ assert_nil model.algorithms[:descriptors][:categories]
nanoparticle = @training_dataset.nanoparticles[-34]
assert_includes nanoparticle.dataset_ids, @training_dataset.id
prediction = model.predict nanoparticle
diff --git a/test/model-validation.rb b/test/model-validation.rb
new file mode 100644
index 0000000..83986d6
--- /dev/null
+++ b/test/model-validation.rb
@@ -0,0 +1,19 @@
+require_relative "setup.rb"
+
+class ValidationModelTest < MiniTest::Test
+
+ def test_validation_model
+ m = Model::Validation.from_csv_file "#{DATA_DIR}/hamster_carcinogenicity.csv"
+ [:endpoint,:species,:source].each do |p|
+ refute_empty m[p]
+ end
+ assert m.classification?
+ refute m.regression?
+ m.crossvalidations.each do |cv|
+ assert cv.accuracy > 0.74, "Crossvalidation accuracy (#{cv.accuracy}) should be larger than 0.75. This may happen due to an unfavorable training/test set split."
+ end
+ prediction = m.predict Compound.from_smiles("CCCC(NN)C")
+ assert_equal "true", prediction[:value]
+ m.delete
+ end
+end
diff --git a/test/nanomaterial-prediction-models.rb b/test/nanomaterial-model-validation.rb
index f90a822..b91c389 100644
--- a/test/nanomaterial-prediction-models.rb
+++ b/test/nanomaterial-model-validation.rb
@@ -1,36 +1,32 @@
require_relative "setup.rb"
-class NanomaterialPredictionModelTest < MiniTest::Test
+class NanomaterialValidationModelTest < MiniTest::Test
def setup
@training_dataset = Dataset.where(:name => "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles").first
- unless @training_dataset
- Import::Enanomapper.import File.join(File.dirname(__FILE__),"data","enm")
- @training_dataset = Dataset.where(name: "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles").first
- end
@prediction_feature = @training_dataset.features.select{|f| f["name"] == 'log2(Net cell association)'}.first
end
- def test_default_nanomaterial_prediction_model
- prediction_model = Model::NanoPrediction.create
+ def test_default_nanomaterial_validation_model
+ validation_model = Model::NanoValidation.create
[:endpoint,:species,:source].each do |p|
- refute_empty prediction_model[p]
+ refute_empty validation_model[p]
end
- assert prediction_model.regression?
- refute prediction_model.classification?
- prediction_model.crossvalidations.each do |cv|
+ assert validation_model.regression?
+ refute validation_model.classification?
+ validation_model.crossvalidations.each do |cv|
refute_nil cv.r_squared
refute_nil cv.rmse
end
nanoparticle = @training_dataset.nanoparticles[-34]
assert_includes nanoparticle.dataset_ids, @training_dataset.id
- prediction = prediction_model.predict nanoparticle
+ prediction = validation_model.predict nanoparticle
refute_nil prediction[:value]
assert_includes prediction[:prediction_interval][0]..prediction[:prediction_interval][1], prediction[:measurements].median, "This assertion assures that measured values are within the prediction interval. It may fail in 5% of the predictions."
- prediction_model.delete
+ validation_model.delete
end
- def test_nanomaterial_prediction_model_parameters
+ def test_nanomaterial_validation_model_parameters
algorithms = {
:descriptors => {
:method => "fingerprint",
@@ -43,16 +39,16 @@ class NanomaterialPredictionModelTest < MiniTest::Test
:prediction => { :method => "OpenTox::Algorithm::Regression.weighted_average" },
:feature_selection => nil
}
- prediction_model = Model::NanoPrediction.create algorithms: algorithms
- assert prediction_model.regression?
- refute prediction_model.classification?
- prediction_model.crossvalidations.each do |cv|
+ validation_model = Model::NanoValidation.create algorithms: algorithms
+ assert validation_model.regression?
+ refute validation_model.classification?
+ validation_model.crossvalidations.each do |cv|
refute_nil cv.r_squared
refute_nil cv.rmse
end
nanoparticle = @training_dataset.nanoparticles[-34]
assert_includes nanoparticle.dataset_ids, @training_dataset.id
- prediction = prediction_model.predict nanoparticle
+ prediction = validation_model.predict nanoparticle
refute_nil prediction[:value]
assert_includes prediction[:prediction_interval][0]..prediction[:prediction_interval][1], prediction[:measurements].median, "This assertion assures that measured values are within the prediction interval. It may fail in 5% of the predictions."
end
diff --git a/test/prediction_models.rb b/test/prediction_models.rb
deleted file mode 100644
index 49a2472..0000000
--- a/test/prediction_models.rb
+++ /dev/null
@@ -1,19 +0,0 @@
-require_relative "setup.rb"
-
-class PredictionModelTest < MiniTest::Test
-
- def test_prediction_model
- pm = Model::Prediction.from_csv_file "#{DATA_DIR}/hamster_carcinogenicity.csv"
- [:endpoint,:species,:source].each do |p|
- refute_empty pm[p]
- end
- assert pm.classification?
- refute pm.regression?
- pm.crossvalidations.each do |cv|
- assert cv.accuracy > 0.74, "Crossvalidation accuracy (#{cv.accuracy}) should be larger than 0.75. This may happen due to an unfavorable training/test set split."
- end
- prediction = pm.predict Compound.from_smiles("CCCC(NN)C")
- assert_equal "true", prediction[:value]
- pm.delete
- end
-end
diff --git a/test/validation-nanoparticle.rb b/test/validation-nanoparticle.rb
index 9351e1b..85392a1 100644
--- a/test/validation-nanoparticle.rb
+++ b/test/validation-nanoparticle.rb
@@ -11,7 +11,8 @@ class NanoparticleValidationTest < MiniTest::Test
def test_validate_default_nanoparticle_model
model = Model::Lazar.create training_dataset: @training_dataset, prediction_feature: @prediction_feature
cv = CrossValidation.create model
- #File.open("tmp.pdf","w+"){|f| f.puts cv.correlation_plot}
+ p cv.id
+ File.open("tmp.pdf","w+"){|f| f.puts cv.correlation_plot format:"pdf"}
refute_nil cv.r_squared
refute_nil cv.rmse
end
@@ -30,6 +31,8 @@ class NanoparticleValidationTest < MiniTest::Test
model = Model::Lazar.create prediction_feature: @prediction_feature, training_dataset: @training_dataset, algorithms: algorithms
assert_equal "Algorithm::Caret.pls", model.algorithms[:prediction][:method]
cv = CrossValidation.create model
+ p cv.id
+ File.open("tmp2.pdf","w+"){|f| f.puts cv.correlation_plot format:"pdf"}
refute_nil cv.r_squared
refute_nil cv.rmse
end