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authorChristoph Helma <helma@in-silico.ch>2015-08-19 14:00:55 +0200
committerChristoph Helma <helma@in-silico.ch>2015-08-19 14:00:55 +0200
commit57bb9c2c691d350dce8c30b862030973043818cc (patch)
tree2280a4d622d51fcc2f334130f89ea180705e43cd /README.md
parentc4692ae10f898c111a7d9d0bc9e7867820f249e1 (diff)
hydrogens added for 3d generation
Diffstat (limited to 'README.md')
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1 files changed, 10 insertions, 15 deletions
diff --git a/README.md b/README.md
index ac40156..e0b17d1 100644
--- a/README.md
+++ b/README.md
@@ -12,33 +12,28 @@ Dependencies
You will also need at least mongodb version 3.0, but Debian "Wheezy" provides version 2.4. Please follow the instructions at http://docs.mongodb.org/manual/tutorial/install-mongodb-on-debian/:
-```
- sudo apt-key adv --keyserver keyserver.ubuntu.com --recv 7F0CEB10
- echo "deb http://repo.mongodb.org/apt/debian wheezy/mongodb-org/3.0 main" | sudo tee /etc/apt/sources.list.d/mongodb-org-3.0.list
- sudo apt-get update
- sudo apt-get install -y mongodb-org
-```
+ ```
+ sudo apt-key adv --keyserver keyserver.ubuntu.com --recv 7F0CEB10
+ echo "deb http://repo.mongodb.org/apt/debian wheezy/mongodb-org/3.0 main" | sudo tee /etc/apt/sources.list.d/mongodb-org-3.0.list
+ sudo apt-get update
+ sudo apt-get install -y mongodb-org
+ ```
Installation
------------
`gem install lazar`
- Please be patient, the compilation of OpenBabel and Fminer libraries can be very time consuming. If installation fails you can try a
+ Please be patient, the compilation of OpenBabel and Fminer libraries can be very time consuming. If installation fails you can try to install manually:
- Manual installation
- ...................
-
-```
+ ```
git clone https://github.com/opentox/lazar.git
cd lazar
ruby ext/lazar/extconf.rb
bundle install
-```
-
- This should give you more verbose information that can help in debugging (e.g. to identify missing libraries).
+ ```
- This should
+ The output should give you more verbose information that can help in debugging (e.g. to identify missing libraries).
Documentation
-------------