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authorgebele <gebele@in-silico.ch>2016-03-21 09:50:12 +0000
committergebele <gebele@in-silico.ch>2016-03-21 09:50:12 +0000
commit6117375fdc800fd071fc4983896c26700bf2acd7 (patch)
tree02165b4523335b4639622218691146fefdd09e09 /README.md
parent2b0a7c725b23d8ef3f525b25fc7105de57ee3897 (diff)
added install script for R packages, updated README with install instructions; changed plot format from svg to png
Diffstat (limited to 'README.md')
-rw-r--r--README.md3
1 files changed, 2 insertions, 1 deletions
diff --git a/README.md b/README.md
index e0b17d1..4de5a12 100644
--- a/README.md
+++ b/README.md
@@ -8,7 +8,7 @@ Dependencies
lazar depends on a couple of external programs and libraries. On Debian 7 "Wheezy" systems you can install them with
- `sudo apt-get install build-essential ruby ruby-dev git cmake swig r-base r-base-dev r-cran-rserve openjdk-7-jre libgsl0-dev libxml2-dev zlib1g-dev libcairo2-dev`
+ `sudo apt-get install build-essential ruby ruby-dev git cmake swig r-base r-base-dev openjdk-7-jre libgsl0-dev libxml2-dev zlib1g-dev libcairo2-dev`
You will also need at least mongodb version 3.0, but Debian "Wheezy" provides version 2.4. Please follow the instructions at http://docs.mongodb.org/manual/tutorial/install-mongodb-on-debian/:
@@ -30,6 +30,7 @@ Installation
git clone https://github.com/opentox/lazar.git
cd lazar
ruby ext/lazar/extconf.rb
+ sudo Rscript ext/lazar/rinstall.R
bundle install
```