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authorChristoph Helma <helma@in-silico.ch>2021-03-08 21:25:45 +0100
committerChristoph Helma <helma@in-silico.ch>2021-03-08 21:25:45 +0100
commit1dcd741a5bff8dc41abf0840f59031eb557ff230 (patch)
treea76547c2cecbace4468a1a6ea392db880f95c6b0 /bin/crossvalidation-folds.rb
parent08e5768e9a446db8ab95152d2e9403a0e635ec63 (diff)
neighbor selction adjusted, summary for high-confidence predictions
Diffstat (limited to 'bin/crossvalidation-folds.rb')
-rwxr-xr-xbin/crossvalidation-folds.rb9
1 files changed, 1 insertions, 8 deletions
diff --git a/bin/crossvalidation-folds.rb b/bin/crossvalidation-folds.rb
index 0c765f7..16a4103 100755
--- a/bin/crossvalidation-folds.rb
+++ b/bin/crossvalidation-folds.rb
@@ -17,6 +17,7 @@ start = 0
:train => indices-test_idxs,
:test => test_idxs
}
+ p idxs
start = last+1
# write training/test data
cv_dir = File.join(File.dirname(ARGV[0]),"crossvalidation",i.to_s)
@@ -39,14 +40,6 @@ start = 0
f.puts t.join(",")
end
end
- file = File.join(cv_dir,t.to_s+"-experimental.csv")
- File.open(file,"w+") do |f|
- f.puts (["Canonical SMILES", model.dependent_variable_name]).join(",")
- idx.collect{|i| model.train[i]}.each do |t|
- # TODO fix
- f.puts t[0..1].join(",")
- end
- end
end
end
Process.waitall