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| author | Christoph Helma <helma@in-silico.ch> | 2021-03-08 17:41:26 +0100 |
|---|---|---|
| committer | Christoph Helma <helma@in-silico.ch> | 2021-03-08 17:41:26 +0100 |
| commit | 08e5768e9a446db8ab95152d2e9403a0e635ec63 (patch) | |
| tree | 6f4486c6bfd84b69febcb9d3a4d9de8fee1b1a26 /bin/preprocessing.R | |
| parent | a29eb3e38414cd252850c9c4fb356f8b2bef6fb4 (diff) | |
cdk predictions fixed
Diffstat (limited to 'bin/preprocessing.R')
| -rw-r--r-- | bin/preprocessing.R | 7 |
1 files changed, 7 insertions, 0 deletions
diff --git a/bin/preprocessing.R b/bin/preprocessing.R new file mode 100644 index 0000000..393bf46 --- /dev/null +++ b/bin/preprocessing.R @@ -0,0 +1,7 @@ +#!/usr/bin/env Rscript +library(caret) +args = commandArgs(trailingOnly=TRUE) +variables = read.csv(args[1]) +scaling = preProcess(variables, method = c("nzv","corr","center", "scale")) +scaled = predict(scaling,variables) +write.csv(scaled,file=args[2], row.names=F, quote=F) |