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authorChristoph Helma <helma@in-silico.ch>2016-02-13 13:15:29 +0100
committerChristoph Helma <helma@in-silico.ch>2016-02-13 13:15:29 +0100
commite778475c578f13f30af4437845716d7e781c2609 (patch)
tree82c14dabc4cf29df1f097a9f8c5c4d8b0b406c4d /lib/crossvalidation.rb
parentf61b7d3c65d084747dc1bf87214e5ec0c57326be (diff)
improved handling of duplicates in validations
Diffstat (limited to 'lib/crossvalidation.rb')
-rw-r--r--lib/crossvalidation.rb3
1 files changed, 0 insertions, 3 deletions
diff --git a/lib/crossvalidation.rb b/lib/crossvalidation.rb
index 9789882..0c5f0be 100644
--- a/lib/crossvalidation.rb
+++ b/lib/crossvalidation.rb
@@ -176,7 +176,6 @@ module OpenTox
mae = 0
weighted_mae = 0
confidence_sum = 0
- p predictions
predictions.each do |pred|
compound_id,activity,prediction,confidence = pred
if activity and prediction
@@ -195,8 +194,6 @@ module OpenTox
y = predictions.collect{|p| p[2]}
R.assign "measurement", x
R.assign "prediction", y
- p x
- p y
R.eval "r <- cor(-log(measurement),-log(prediction),use='complete')"
r = R.eval("r").to_ruby