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author | helma@in-silico.ch <helma@in-silico.ch> | 2018-11-02 20:34:44 +0100 |
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committer | helma@in-silico.ch <helma@in-silico.ch> | 2018-11-02 20:34:44 +0100 |
commit | 3a9c9332b660d35720ad4fa1f55ee0883e53aecd (patch) | |
tree | 0c4b552ba434c4e03ea6e7808ead5a2d4ecb4cec /lib/leave-one-out-validation.rb | |
parent | 5b08a8c6d8e5567d253bec92d5bf5d18fd040cdc (diff) |
warnings fixed, cleanup
Diffstat (limited to 'lib/leave-one-out-validation.rb')
-rw-r--r-- | lib/leave-one-out-validation.rb | 9 |
1 files changed, 1 insertions, 8 deletions
diff --git a/lib/leave-one-out-validation.rb b/lib/leave-one-out-validation.rb index b0905b8..d37b6ce 100644 --- a/lib/leave-one-out-validation.rb +++ b/lib/leave-one-out-validation.rb @@ -16,18 +16,11 @@ module OpenTox loo = klass.new :model_id => model.id predictions = model.predict model.training_dataset.substances predictions.each{|cid,p| p.delete(:neighbors)} - nr_unpredicted = 0 predictions.each do |cid,prediction| - if prediction[:value] - prediction[:measurements] = model.training_dataset.values(cid, prediction[:prediction_feature_id]) - else - nr_unpredicted += 1 - end + prediction[:measurements] = model.training_dataset.values(cid, prediction[:prediction_feature_id]) if prediction[:value] predictions.delete(cid) unless prediction[:value] and prediction[:measurements] end predictions.select!{|cid,p| p[:value] and p[:measurements]} - loo.nr_instances = predictions.size - loo.nr_unpredicted = nr_unpredicted loo.predictions = predictions loo.statistics $logger.debug "#{model.name}, LOO validation: #{Time.now-t} seconds" |