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authorChristoph Helma <helma@in-silico.ch>2016-07-21 17:35:20 +0200
committerChristoph Helma <helma@in-silico.ch>2016-07-21 17:35:20 +0200
commitf93aad7227c7bb3702fd28aab2d289f1ca9ce7e9 (patch)
treed4ed329ac76608734ab753f15299383c8255349c /lib
parent0f31c884d1bcfa448a1bf43a41d8fd6cf88bfc52 (diff)
correlation plot fixed
Diffstat (limited to 'lib')
-rw-r--r--lib/import.rb2
-rw-r--r--lib/validation-statistics.rb4
2 files changed, 4 insertions, 2 deletions
diff --git a/lib/import.rb b/lib/import.rb
index 4c49e5e..e187e3c 100644
--- a/lib/import.rb
+++ b/lib/import.rb
@@ -73,6 +73,8 @@ module OpenTox
nanoparticle.parse_ambit_value proteomics_features[identifier], value, dataset
end
else
+ name = effect["endpoint"]
+ name = "log2(Net cell association)" if name == "Log2 transformed" # use a sensible name
feature = klass.find_or_create_by(
:name => effect["endpoint"],
:unit => effect["result"]["unit"],
diff --git a/lib/validation-statistics.rb b/lib/validation-statistics.rb
index 9aa9cff..3582c71 100644
--- a/lib/validation-statistics.rb
+++ b/lib/validation-statistics.rb
@@ -143,8 +143,8 @@ module OpenTox
y = []
feature = Feature.find(predictions.first.last["prediction_feature_id"])
predictions.each do |sid,p|
- x << p["value"]
- y << p["measurements"].median
+ x << p["measurements"].median
+ y << p["value"]
end
R.assign "measurement", x
R.assign "prediction", y