diff options
author | gebele <gebele@in-silico.ch> | 2016-11-10 11:07:03 +0000 |
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committer | gebele <gebele@in-silico.ch> | 2016-11-10 11:07:03 +0000 |
commit | 347ef2891876af871e101f9a9efc643e5f28da4c (patch) | |
tree | 508a3f0fcfeb4fa934f703adbdf9b0aee2954ece /lib | |
parent | 295dcfc74e1375e495ec3d9c1e74a402eb4decd4 (diff) | |
parent | 7bd244b35d2e2059baf1fa535dca854999b5da75 (diff) |
Merge branch 'development' of https://github.com/opentox/lazar into development
Diffstat (limited to 'lib')
-rw-r--r-- | lib/crossvalidation.rb | 2 | ||||
-rw-r--r-- | lib/validation-statistics.rb | 11 |
2 files changed, 8 insertions, 5 deletions
diff --git a/lib/crossvalidation.rb b/lib/crossvalidation.rb index 4f779a2..be680ae 100644 --- a/lib/crossvalidation.rb +++ b/lib/crossvalidation.rb @@ -95,7 +95,6 @@ module OpenTox crossvalidation_ids.collect{|id| CrossValidation.find(id)} end -=begin def correlation_plot format: "png" #unless correlation_plot_id feature = Feature.find(crossvalidations.first.model.prediction_feature) @@ -129,7 +128,6 @@ module OpenTox #end $gridfs.find_one(_id: correlation_plot_id).data end -=end end end diff --git a/lib/validation-statistics.rb b/lib/validation-statistics.rb index b251bdb..b6f8a60 100644 --- a/lib/validation-statistics.rb +++ b/lib/validation-statistics.rb @@ -66,8 +66,13 @@ module OpenTox end def probability_plot format: "pdf" - unless probability_plot_id - tmpfile = "/tmp/#{id.to_s}_probability.#{format}" + #unless probability_plot_id + + #tmpdir = File.join(ENV["HOME"], "tmp") + tmpdir = "/tmp" + #p tmpdir + FileUtils.mkdir_p tmpdir + tmpfile = File.join(tmpdir,"#{id.to_s}_probability.#{format}") accuracies = [] probabilities = [] correct_predictions = 0 @@ -91,7 +96,7 @@ module OpenTox file = Mongo::Grid::File.new(File.read(tmpfile), :filename => "#{self.id.to_s}_probability_plot.svg") plot_id = $gridfs.insert_one(file) update(:probability_plot_id => plot_id) - end + #end $gridfs.find_one(_id: probability_plot_id).data end end |