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author | Christoph Helma <helma@in-silico.ch> | 2021-03-08 17:41:26 +0100 |
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committer | Christoph Helma <helma@in-silico.ch> | 2021-03-08 17:41:26 +0100 |
commit | 08e5768e9a446db8ab95152d2e9403a0e635ec63 (patch) | |
tree | 6f4486c6bfd84b69febcb9d3a4d9de8fee1b1a26 /shell.nix | |
parent | a29eb3e38414cd252850c9c4fb356f8b2bef6fb4 (diff) |
cdk predictions fixed
Diffstat (limited to 'shell.nix')
-rw-r--r-- | shell.nix | 36 |
1 files changed, 1 insertions, 35 deletions
@@ -1,42 +1,8 @@ with import <nixpkgs> { }; let R-packages = rWrapper.override { packages = with rPackages; [ ggplot2 caret ]; }; - openbabel = stdenv.mkDerivation { - - name = "openbabel-ruby"; - - src = fetchurl { - url = "https://github.com/openbabel/openbabel/releases/download/openbabel-3-1-1/openbabel-3.1.1-source.tar.bz2"; - sha256 = "puyDgdWeoypLJByLH715mstSvpSrZM29clBvtOInDmg="; - }; - - #outputs = [ "lib" ]; - - buildInputs = [ - # openbabel - cmake - ruby - swig - boost - zlib - libxml2 - cairo - eigen - pkg-config - pcre - ]; - - configurePhase = '' - cmake . -DWITH_MAEPARSER=OFF -DWITH_JSON=OFF -DBUILD_GUI=OFF -DENABLE_TESTS=OFF -DRUN_SWIG=ON -DBINDINGS_ONLY=ON -DRUBY_BINDINGS=ON -DMINIMAL_BUILD=ON -DOPTIMIZE_NATIVE=ON -DCMAKE_INSTALL_PREFIX=$out -DCMAKE_INSTALL_RPATH:STRING=$out/lib - ''; - - buildPhase = '' - make -j12 - ''; - - }; in mkShell { - name = "mutagenicity-paper"; + name = "lazar"; buildInputs = [ git R-packages |