diff options
Diffstat (limited to 'ext')
| -rw-r--r-- | ext/lazar/extconf.rb | 2 | ||||
| -rw-r--r-- | ext/lazar/rinstall.R | 15 |
2 files changed, 9 insertions, 8 deletions
diff --git a/ext/lazar/extconf.rb b/ext/lazar/extconf.rb index d3d2756..9997106 100644 --- a/ext/lazar/extconf.rb +++ b/ext/lazar/extconf.rb @@ -15,7 +15,7 @@ abort "Please install Rserve on your system. Execute 'install.packages('Rserve') # install R packages r_dir = File.join main_dir, "R" FileUtils.mkdir_p r_dir -FileUtils.mkdir_p File.join(main_dir,"bin") # for Rserve binary +#FileUtils.mkdir_p File.join(main_dir,"bin") # for Rserve binary rinstall = File.expand_path(File.join(File.dirname(__FILE__),"rinstall.R")) puts `Rscript --vanilla #{rinstall} #{r_dir}` diff --git a/ext/lazar/rinstall.R b/ext/lazar/rinstall.R index 62595d3..7023f60 100644 --- a/ext/lazar/rinstall.R +++ b/ext/lazar/rinstall.R @@ -1,10 +1,11 @@ libdir = commandArgs(trailingOnly=TRUE)[1] repo = "https://stat.ethz.ch/CRAN/" #install.packages("Rserve",lib=libdir,repos=repo,dependencies=TRUE) -install.packages("iterators",lib=libdir,repos=repo); -install.packages("foreach",lib=libdir,repos=repo); -install.packages("gridExtra",lib=libdir,repos=repo); -install.packages("ggplot2",lib=libdir,repos=repo); -install.packages("pls",lib=libdir,repos=repo); -install.packages("caret",lib=libdir,repos=repo); -install.packages("doMC",lib=libdir,repos=repo); +install.packages("iterators",lib=libdir,repos=repo,dependencies=TRUE); +install.packages("foreach",lib=libdir,repos=repo,dependencies=TRUE); +install.packages("gridExtra",lib=libdir,repos=repo,dependencies=TRUE); +install.packages("ggplot2",lib=libdir,repos=repo,dependencies=TRUE); +install.packages("pls",lib=libdir,repos=repo,dependencies=TRUE); +install.packages("randomForest",lib=libdir,repos=repo,dependencies=TRUE); +install.packages("caret",lib=libdir,repos=repo,dependencies=TRUE); +install.packages("doMC",lib=libdir,repos=repo,dependencies=TRUE); |