diff options
Diffstat (limited to 'lib/compound.rb')
| -rw-r--r-- | lib/compound.rb | 3 |
1 files changed, 2 insertions, 1 deletions
diff --git a/lib/compound.rb b/lib/compound.rb index 56646c0..0ee853d 100644 --- a/lib/compound.rb +++ b/lib/compound.rb @@ -17,7 +17,8 @@ module OpenTox @inchi = sdf2inchi(params[:sdf]) @uri = File.join(@@config[:services]["opentox-compound"],URI.escape(@inchi)) elsif params[:name] - @inchi = RestClient.get("#{@@cactus_uri}#{params[:name]}/stdinchi").chomp + # paranoid URI encoding to keep SMILES charges and brackets + @inchi = RestClient.get("#{@@cactus_uri}#{URI.encode(params[:name], Regexp.new("[^#{URI::PATTERN::UNRESERVED}]"))}/stdinchi").chomp @uri = File.join(@@config[:services]["opentox-compound"],URI.escape(@inchi)) elsif params[:uri] @uri = params[:uri] |