diff options
Diffstat (limited to 'lib/import.rb')
| -rw-r--r-- | lib/import.rb | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/lib/import.rb b/lib/import.rb index 11cb367..dfe5e2d 100644 --- a/lib/import.rb +++ b/lib/import.rb @@ -40,10 +40,10 @@ module OpenTox datasets[bundle_uri].substance_ids << nanoparticle.id nanoparticle["dataset_ids"] << datasets[bundle_uri].id end + bundle = datasets[np["bundles"].keys.first].id if np["bundles"].size == 1 study["effects"].each do |effect| effect["result"]["textValue"] ? klass = NominalFeature : klass = NumericFeature # TODO parse core/coating - # TODO parse proteomics, they come as a large textValue #$logger.debug File.join(np["compound"]["URI"],"study") effect["conditions"].delete_if { |k, v| v.nil? } # parse proteomics data @@ -53,7 +53,7 @@ module OpenTox :name => identifier, :category => "Proteomics", ) - nanoparticle.parse_ambit_value feature, value + nanoparticle.parse_ambit_value feature, value, bundle end else feature = klass.find_or_create_by( @@ -62,7 +62,7 @@ module OpenTox :category => study["protocol"]["topcategory"], :conditions => effect["conditions"] ) - nanoparticle.parse_ambit_value feature, effect["result"] + nanoparticle.parse_ambit_value feature, effect["result"], bundle end end nanoparticle.save |