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-rw-r--r--lib/validation-statistics.rb6
1 files changed, 3 insertions, 3 deletions
diff --git a/lib/validation-statistics.rb b/lib/validation-statistics.rb
index 6b252b1..9aa9cff 100644
--- a/lib/validation-statistics.rb
+++ b/lib/validation-statistics.rb
@@ -136,9 +136,9 @@ module OpenTox
}
end
- def correlation_plot
+ def correlation_plot format: "png"
unless correlation_plot_id
- tmpfile = "/tmp/#{id.to_s}_correlation.pdf"
+ tmpfile = "/tmp/#{id.to_s}_correlation.#{format}"
x = []
y = []
feature = Feature.find(predictions.first.last["prediction_feature_id"])
@@ -155,7 +155,7 @@ module OpenTox
R.eval "image = qplot(prediction,measurement,main='#{title}',xlab='Prediction',ylab='Measurement',asp=1,xlim=range, ylim=range)"
R.eval "image = image + geom_abline(intercept=0, slope=1)"
R.eval "ggsave(file='#{tmpfile}', plot=image)"
- file = Mongo::Grid::File.new(File.read(tmpfile), :filename => "#{id.to_s}_correlation_plot.png")
+ file = Mongo::Grid::File.new(File.read(tmpfile), :filename => "#{id.to_s}_correlation_plot.#{format}")
plot_id = $gridfs.insert_one(file)
update(:correlation_plot_id => plot_id)
end