diff options
Diffstat (limited to 'lib/validation.rb')
| -rw-r--r-- | lib/validation.rb | 5 |
1 files changed, 2 insertions, 3 deletions
diff --git a/lib/validation.rb b/lib/validation.rb index 484e22e..6b515e4 100644 --- a/lib/validation.rb +++ b/lib/validation.rb @@ -27,14 +27,14 @@ module OpenTox atts = model.attributes.dup # do not modify attributes from original model atts["_id"] = BSON::ObjectId.new atts[:training_dataset_id] = training_set.id - validation_model = model.class.create training_set, atts + validation_model = model.class.create model.prediction_feature, training_set, atts validation_model.save predictions = validation_model.predict test_set.compounds predictions.each{|cid,p| p.delete(:neighbors)} nr_unpredicted = 0 predictions.each do |cid,prediction| if prediction[:value] - prediction[:measured] = test_set.data_entries[cid][prediction[:prediction_feature_id].to_s] + prediction[:measured] = Substance.find(cid).toxicities[prediction[:prediction_feature_id].to_s] else nr_unpredicted += 1 end @@ -42,7 +42,6 @@ module OpenTox end validation = self.new( :model_id => validation_model.id, - #:prediction_dataset_id => prediction_dataset.id, :test_dataset_id => test_set.id, :nr_instances => test_set.compounds.size, :nr_unpredicted => nr_unpredicted, |