6 files changed, 1250 insertions, 0 deletions
diff --git a/rdoc/classes/OpenTox.html b/rdoc/classes/OpenTox.html
new file mode 100644
index 0000000..21b7032
--- /dev/null
+++ b/rdoc/classes/OpenTox.html
@@ -0,0 +1,115 @@
+<?xml version="1.0" encoding="iso-8859-1"?>
+<!DOCTYPE html 
+     PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
+     "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
+<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
+<head>
+  <title>Module: OpenTox</title>
+  <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
+  <meta http-equiv="Content-Script-Type" content="text/javascript" />
+  <link rel="stylesheet" href=".././rdoc-style.css" type="text/css" media="screen" />
+  <script type="text/javascript">
+  // <![CDATA[
+
+  function popupCode( url ) {
+    window.open(url, "Code", "resizable=yes,scrollbars=yes,toolbar=no,status=no,height=150,width=400")
+  }
+
+  function toggleCode( id ) {
+    if ( document.getElementById )
+      elem = document.getElementById( id );
+    else if ( document.all )
+      elem = eval( "document.all." + id );
+    else
+      return false;
+
+    elemStyle = elem.style;
+    
+    if ( elemStyle.display != "block" ) {
+      elemStyle.display = "block"
+    } else {
+      elemStyle.display = "none"
+    }
+
+    return true;
+  }
+  
+  // Make codeblocks hidden by default
+  document.writeln( "<style type=\"text/css\">div.method-source-code { display: none }</style>" )
+  
+  // ]]>
+  </script>
+
+</head>
+<body>
+
+
+
+    <div id="classHeader">
+        <table class="header-table">
+        <tr class="top-aligned-row">
+          <td><strong>Module</strong></td>
+          <td class="class-name-in-header">OpenTox</td>
+        </tr>
+        <tr class="top-aligned-row">
+            <td><strong>In:</strong></td>
+            <td>
+                <a href="../files/lib/opentox-ruby-api-wrapper_rb.html">
+                lib/opentox-ruby-api-wrapper.rb
+                </a>
+        <br />
+            </td>
+        </tr>
+
+        </table>
+    </div>
+  <!-- banner header -->
+
+  <div id="bodyContent">
+
+
+
+  <div id="contextContent">
+
+
+
+   </div>
+
+
+  </div>
+
+
+    <!-- if includes -->
+
+    <div id="section">
+
+    <div id="class-list">
+      <h3 class="section-bar">Classes and Modules</h3>
+
+      Class <a href="OpenTox/Compound.html" class="link">OpenTox::Compound</a><br />
+Class <a href="OpenTox/Dataset.html" class="link">OpenTox::Dataset</a><br />
+Class <a href="OpenTox/Feature.html" class="link">OpenTox::Feature</a><br />
+Class <a href="OpenTox/Fminer.html" class="link">OpenTox::Fminer</a><br />
+Class <a href="OpenTox/OpenTox.html" class="link">OpenTox::OpenTox</a><br />
+
+    </div>
+
+
+
+
+      
+
+
+    <!-- if method_list -->
+
+
+  </div>
+
+
+<div id="validator-badges">
+  <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
+</div>
+
+</body>
+</html>
+\ No newline at end of file
diff --git a/rdoc/classes/OpenTox/Compound.html b/rdoc/classes/OpenTox/Compound.html
new file mode 100644
index 0000000..c892d0e
--- /dev/null
+++ b/rdoc/classes/OpenTox/Compound.html
@@ -0,0 +1,247 @@
+<?xml version="1.0" encoding="iso-8859-1"?>
+<!DOCTYPE html 
+     PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
+     "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
+<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
+<head>
+  <title>Class: OpenTox::Compound</title>
+  <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
+  <meta http-equiv="Content-Script-Type" content="text/javascript" />
+  <link rel="stylesheet" href="../.././rdoc-style.css" type="text/css" media="screen" />
+  <script type="text/javascript">
+  // <![CDATA[
+
+  function popupCode( url ) {
+    window.open(url, "Code", "resizable=yes,scrollbars=yes,toolbar=no,status=no,height=150,width=400")
+  }
+
+  function toggleCode( id ) {
+    if ( document.getElementById )
+      elem = document.getElementById( id );
+    else if ( document.all )
+      elem = eval( "document.all." + id );
+    else
+      return false;
+
+    elemStyle = elem.style;
+    
+    if ( elemStyle.display != "block" ) {
+      elemStyle.display = "block"
+    } else {
+      elemStyle.display = "none"
+    }
+
+    return true;
+  }
+  
+  // Make codeblocks hidden by default
+  document.writeln( "<style type=\"text/css\">div.method-source-code { display: none }</style>" )
+  
+  // ]]>
+  </script>
+
+</head>
+<body>
+
+
+
+    <div id="classHeader">
+        <table class="header-table">
+        <tr class="top-aligned-row">
+          <td><strong>Class</strong></td>
+          <td class="class-name-in-header">OpenTox::Compound</td>
+        </tr>
+        <tr class="top-aligned-row">
+            <td><strong>In:</strong></td>
+            <td>
+                <a href="../../files/lib/opentox-ruby-api-wrapper_rb.html">
+                lib/opentox-ruby-api-wrapper.rb
+                </a>
+        <br />
+            </td>
+        </tr>
+
+        <tr class="top-aligned-row">
+            <td><strong>Parent:</strong></td>
+            <td>
+                <a href="OpenTox.html">
+                OpenTox
+               </a>
+            </td>
+        </tr>
+        </table>
+    </div>
+  <!-- banner header -->
+
+  <div id="bodyContent">
+
+
+
+  <div id="contextContent">
+
+
+
+   </div>
+
+    <div id="method-list">
+      <h3 class="section-bar">Methods</h3>
+
+      <div class="name-list">
+      <a href="#M000004">match</a>&nbsp;&nbsp;
+      <a href="#M000003">match?</a>&nbsp;&nbsp;
+      <a href="#M000001">new</a>&nbsp;&nbsp;
+      <a href="#M000002">smiles</a>&nbsp;&nbsp;
+      </div>
+    </div>
+
+  </div>
+
+
+    <!-- if includes -->
+
+    <div id="section">
+
+
+
+
+
+      
+
+
+    <!-- if method_list -->
+    <div id="methods">
+      <h3 class="section-bar">Public Class methods</h3>
+
+      <div id="method-M000001" class="method-detail">
+        <a name="M000001"></a>
+
+        <div class="method-heading">
+          <a href="#M000001" class="method-signature">
+          <span class="method-name">new</span><span class="method-args">(params)</span>
+          </a>
+        </div>
+      
+        <div class="method-description">
+          <p>
+Initialize with <tt>:uri =&gt; uri</tt>, <tt>:<a
+href="Compound.html#M000002">smiles</a> =&gt; <a
+href="Compound.html#M000002">smiles</a></tt> or <tt>:name =&gt; name</tt>
+(name can be also an InChI/InChiKey, CAS number, etc)
+</p>
+          <p><a class="source-toggle" href="#"
+            onclick="toggleCode('M000001-source');return false;">[Source]</a></p>
+          <div class="method-source-code" id="M000001-source">
+<pre>
+<span class="ruby-comment cmt"># File lib/opentox-ruby-api-wrapper.rb, line 18</span>
+                <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">params</span>)
+                        <span class="ruby-keyword kw">if</span> <span class="ruby-identifier">params</span>[<span class="ruby-identifier">:uri</span>]
+                                <span class="ruby-ivar">@uri</span> = <span class="ruby-identifier">params</span>[<span class="ruby-identifier">:uri</span>].<span class="ruby-identifier">to_s</span>
+                        <span class="ruby-keyword kw">elsif</span> <span class="ruby-identifier">params</span>[<span class="ruby-identifier">:smiles</span>]
+                                <span class="ruby-ivar">@uri</span> = <span class="ruby-constant">RestClient</span>.<span class="ruby-identifier">post</span> <span class="ruby-constant">ENV</span>[<span class="ruby-value str">'OPENTOX_COMPOUNDS'</span>] ,<span class="ruby-identifier">:smiles</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">uri_escape</span>(<span class="ruby-identifier">params</span>[<span class="ruby-identifier">:smiles</span>])
+                        <span class="ruby-keyword kw">elsif</span> <span class="ruby-identifier">params</span>[<span class="ruby-identifier">:name</span>]
+                                <span class="ruby-ivar">@uri</span> = <span class="ruby-constant">RestClient</span>.<span class="ruby-identifier">post</span> <span class="ruby-constant">ENV</span>[<span class="ruby-value str">'OPENTOX_COMPOUNDS'</span>] ,<span class="ruby-identifier">:name</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">uri_escape</span>(<span class="ruby-identifier">params</span>[<span class="ruby-identifier">:name</span>])
+                        <span class="ruby-keyword kw">end</span>
+                <span class="ruby-keyword kw">end</span>
+</pre>
+          </div>
+        </div>
+      </div>
+
+      <h3 class="section-bar">Public Instance methods</h3>
+
+      <div id="method-M000004" class="method-detail">
+        <a name="M000004"></a>
+
+        <div class="method-heading">
+          <a href="#M000004" class="method-signature">
+          <span class="method-name">match</span><span class="method-args">(smarts_features)</span>
+          </a>
+        </div>
+      
+        <div class="method-description">
+          <p>
+Match an array of smarts features, returns matching features
+</p>
+          <p><a class="source-toggle" href="#"
+            onclick="toggleCode('M000004-source');return false;">[Source]</a></p>
+          <div class="method-source-code" id="M000004-source">
+<pre>
+<span class="ruby-comment cmt"># File lib/opentox-ruby-api-wrapper.rb, line 43</span>
+                <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">match</span>(<span class="ruby-identifier">smarts_features</span>)
+                        <span class="ruby-identifier">smarts_features</span>.<span class="ruby-identifier">collect</span>{ <span class="ruby-operator">|</span><span class="ruby-identifier">smarts</span><span class="ruby-operator">|</span> <span class="ruby-identifier">smarts</span> <span class="ruby-keyword kw">if</span> <span class="ruby-keyword kw">self</span>.<span class="ruby-identifier">match?</span>(<span class="ruby-identifier">smarts</span>.<span class="ruby-identifier">name</span>) }.<span class="ruby-identifier">compact</span>
+                <span class="ruby-keyword kw">end</span>
+</pre>
+          </div>
+        </div>
+      </div>
+
+      <div id="method-M000003" class="method-detail">
+        <a name="M000003"></a>
+
+        <div class="method-heading">
+          <a href="#M000003" class="method-signature">
+          <span class="method-name">match?</span><span class="method-args">(smarts)</span>
+          </a>
+        </div>
+      
+        <div class="method-description">
+          <p>
+Matchs a smarts string
+</p>
+          <p><a class="source-toggle" href="#"
+            onclick="toggleCode('M000003-source');return false;">[Source]</a></p>
+          <div class="method-source-code" id="M000003-source">
+<pre>
+<span class="ruby-comment cmt"># File lib/opentox-ruby-api-wrapper.rb, line 34</span>
+                <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">match?</span>(<span class="ruby-identifier">smarts</span>)
+                        <span class="ruby-keyword kw">if</span> <span class="ruby-constant">RestClient</span>.<span class="ruby-identifier">get</span>(<span class="ruby-ivar">@uri</span> <span class="ruby-operator">+</span> <span class="ruby-value str">'/match/'</span> <span class="ruby-operator">+</span> <span class="ruby-identifier">uri_escape</span>(<span class="ruby-identifier">smarts</span>)) <span class="ruby-operator">==</span> <span class="ruby-value str">'true'</span>
+                                <span class="ruby-keyword kw">true</span>
+                        <span class="ruby-keyword kw">else</span>
+                                <span class="ruby-keyword kw">false</span>
+                        <span class="ruby-keyword kw">end</span>
+                <span class="ruby-keyword kw">end</span>
+</pre>
+          </div>
+        </div>
+      </div>
+
+      <div id="method-M000002" class="method-detail">
+        <a name="M000002"></a>
+
+        <div class="method-heading">
+          <a href="#M000002" class="method-signature">
+          <span class="method-name">smiles</span><span class="method-args">()</span>
+          </a>
+        </div>
+      
+        <div class="method-description">
+          <p>
+Get the (canonical) <a href="Compound.html#M000002">smiles</a>
+</p>
+          <p><a class="source-toggle" href="#"
+            onclick="toggleCode('M000002-source');return false;">[Source]</a></p>
+          <div class="method-source-code" id="M000002-source">
+<pre>
+<span class="ruby-comment cmt"># File lib/opentox-ruby-api-wrapper.rb, line 29</span>
+                <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">smiles</span>
+                        <span class="ruby-constant">RestClient</span>.<span class="ruby-identifier">get</span> <span class="ruby-ivar">@uri</span>
+                <span class="ruby-keyword kw">end</span>
+</pre>
+          </div>
+        </div>
+      </div>
+
+
+    </div>
+
+
+  </div>
+
+
+<div id="validator-badges">
+  <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
+</div>
+
+</body>
+</html>
+\ No newline at end of file
diff --git a/rdoc/classes/OpenTox/Dataset.html b/rdoc/classes/OpenTox/Dataset.html
new file mode 100644
index 0000000..f6966f7
--- /dev/null
+++ b/rdoc/classes/OpenTox/Dataset.html
@@ -0,0 +1,331 @@
+<?xml version="1.0" encoding="iso-8859-1"?>
+<!DOCTYPE html 
+     PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
+     "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
+<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
+<head>
+  <title>Class: OpenTox::Dataset</title>
+  <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
+  <meta http-equiv="Content-Script-Type" content="text/javascript" />
+  <link rel="stylesheet" href="../.././rdoc-style.css" type="text/css" media="screen" />
+  <script type="text/javascript">
+  // <![CDATA[
+
+  function popupCode( url ) {
+    window.open(url, "Code", "resizable=yes,scrollbars=yes,toolbar=no,status=no,height=150,width=400")
+  }
+
+  function toggleCode( id ) {
+    if ( document.getElementById )
+      elem = document.getElementById( id );
+    else if ( document.all )
+      elem = eval( "document.all." + id );
+    else
+      return false;
+
+    elemStyle = elem.style;
+    
+    if ( elemStyle.display != "block" ) {
+      elemStyle.display = "block"
+    } else {
+      elemStyle.display = "none"
+    }
+
+    return true;
+  }
+  
+  // Make codeblocks hidden by default
+  document.writeln( "<style type=\"text/css\">div.method-source-code { display: none }</style>" )
+  
+  // ]]>
+  </script>
+
+</head>
+<body>
+
+
+
+    <div id="classHeader">
+        <table class="header-table">
+        <tr class="top-aligned-row">
+          <td><strong>Class</strong></td>
+          <td class="class-name-in-header">OpenTox::Dataset</td>
+        </tr>
+        <tr class="top-aligned-row">
+            <td><strong>In:</strong></td>
+            <td>
+                <a href="../../files/lib/opentox-ruby-api-wrapper_rb.html">
+                lib/opentox-ruby-api-wrapper.rb
+                </a>
+        <br />
+            </td>
+        </tr>
+
+        <tr class="top-aligned-row">
+            <td><strong>Parent:</strong></td>
+            <td>
+                <a href="OpenTox.html">
+                OpenTox
+               </a>
+            </td>
+        </tr>
+        </table>
+    </div>
+  <!-- banner header -->
+
+  <div id="bodyContent">
+
+
+
+  <div id="contextContent">
+
+
+
+   </div>
+
+    <div id="method-list">
+      <h3 class="section-bar">Methods</h3>
+
+      <div class="name-list">
+      <a href="#M000016">add</a>&nbsp;&nbsp;
+      <a href="#M000013">all_compounds_and_features</a>&nbsp;&nbsp;
+      <a href="#M000014">all_features</a>&nbsp;&nbsp;
+      <a href="#M000012">compounds</a>&nbsp;&nbsp;
+      <a href="#M000015">features</a>&nbsp;&nbsp;
+      <a href="#M000011">name</a>&nbsp;&nbsp;
+      <a href="#M000010">new</a>&nbsp;&nbsp;
+      </div>
+    </div>
+
+  </div>
+
+
+    <!-- if includes -->
+
+    <div id="section">
+
+
+
+
+
+      
+
+
+    <!-- if method_list -->
+    <div id="methods">
+      <h3 class="section-bar">Public Class methods</h3>
+
+      <div id="method-M000010" class="method-detail">
+        <a name="M000010"></a>
+
+        <div class="method-heading">
+          <a href="#M000010" class="method-signature">
+          <span class="method-name">new</span><span class="method-args">(params)</span>
+          </a>
+        </div>
+      
+        <div class="method-description">
+          <p>
+Initialize with <tt>:uri =&gt; uri</tt> or <tt>:<a
+href="Dataset.html#M000011">name</a> =&gt; <a
+href="Dataset.html#M000011">name</a></tt> (creates a <a
+href="Dataset.html#M000010">new</a> dataset)
+</p>
+          <p><a class="source-toggle" href="#"
+            onclick="toggleCode('M000010-source');return false;">[Source]</a></p>
+          <div class="method-source-code" id="M000010-source">
+<pre>
+<span class="ruby-comment cmt"># File lib/opentox-ruby-api-wrapper.rb, line 78</span>
+                <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">params</span>)
+                        <span class="ruby-keyword kw">if</span> <span class="ruby-identifier">params</span>[<span class="ruby-identifier">:uri</span>]
+                                <span class="ruby-ivar">@uri</span> = <span class="ruby-identifier">params</span>[<span class="ruby-identifier">:uri</span>].<span class="ruby-identifier">to_s</span>
+                        <span class="ruby-keyword kw">elsif</span> <span class="ruby-identifier">params</span>[<span class="ruby-identifier">:name</span>] 
+                                <span class="ruby-ivar">@uri</span> = <span class="ruby-constant">RestClient</span>.<span class="ruby-identifier">post</span> <span class="ruby-constant">ENV</span>[<span class="ruby-value str">'OPENTOX_DATASETS'</span>], <span class="ruby-identifier">:name</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">params</span>[<span class="ruby-identifier">:name</span>]
+                                <span class="ruby-constant">RestClient</span>.<span class="ruby-identifier">delete</span> <span class="ruby-ivar">@uri</span> <span class="ruby-operator">+</span> <span class="ruby-value str">'/associations'</span>
+                        <span class="ruby-keyword kw">end</span>
+                <span class="ruby-keyword kw">end</span>
+</pre>
+          </div>
+        </div>
+      </div>
+
+      <h3 class="section-bar">Public Instance methods</h3>
+
+      <div id="method-M000016" class="method-detail">
+        <a name="M000016"></a>
+
+        <div class="method-heading">
+          <a href="#M000016" class="method-signature">
+          <span class="method-name">add</span><span class="method-args">(compound,feature)</span>
+          </a>
+        </div>
+      
+        <div class="method-description">
+          <p>
+Add a compound and a feature to a dataset
+</p>
+          <p><a class="source-toggle" href="#"
+            onclick="toggleCode('M000016-source');return false;">[Source]</a></p>
+          <div class="method-source-code" id="M000016-source">
+<pre>
+<span class="ruby-comment cmt"># File lib/opentox-ruby-api-wrapper.rb, line 118</span>
+                <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">add</span>(<span class="ruby-identifier">compound</span>,<span class="ruby-identifier">feature</span>)
+                        <span class="ruby-constant">RestClient</span>.<span class="ruby-identifier">put</span> <span class="ruby-ivar">@uri</span>, <span class="ruby-identifier">:compound_uri</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">compound</span>.<span class="ruby-identifier">uri</span>, <span class="ruby-identifier">:feature_uri</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">feature</span>.<span class="ruby-identifier">uri</span>
+                <span class="ruby-keyword kw">end</span>
+</pre>
+          </div>
+        </div>
+      </div>
+
+      <div id="method-M000013" class="method-detail">
+        <a name="M000013"></a>
+
+        <div class="method-heading">
+          <a href="#M000013" class="method-signature">
+          <span class="method-name">all_compounds_and_features</span><span class="method-args">()</span>
+          </a>
+        </div>
+      
+        <div class="method-description">
+          <p>
+Get all <a href="Dataset.html#M000012">compounds</a> and <a
+href="Dataset.html#M000015">features</a> from a dataset, returns a hash
+with compound_uris as keys and arrays of <a
+href="Dataset.html#M000015">features</a> as values
+</p>
+          <p><a class="source-toggle" href="#"
+            onclick="toggleCode('M000013-source');return false;">[Source]</a></p>
+          <div class="method-source-code" id="M000013-source">
+<pre>
+<span class="ruby-comment cmt"># File lib/opentox-ruby-api-wrapper.rb, line 98</span>
+                <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">all_compounds_and_features</span>
+                        <span class="ruby-identifier">compounds</span> = {}
+                        <span class="ruby-constant">Crack</span><span class="ruby-operator">::</span><span class="ruby-constant">XML</span>.<span class="ruby-identifier">parse</span>(<span class="ruby-constant">RestClient</span>.<span class="ruby-identifier">get</span> <span class="ruby-ivar">@uri</span> <span class="ruby-operator">+</span> <span class="ruby-value str">'/compounds/features'</span>)[<span class="ruby-value str">'dataset'</span>][<span class="ruby-value str">'compound'</span>].<span class="ruby-identifier">each</span> <span class="ruby-keyword kw">do</span> <span class="ruby-operator">|</span><span class="ruby-identifier">c</span><span class="ruby-operator">|</span>
+                                <span class="ruby-identifier">features</span> = <span class="ruby-identifier">c</span>[<span class="ruby-value str">'feature_uri'</span>].<span class="ruby-identifier">collect</span>{ <span class="ruby-operator">|</span><span class="ruby-identifier">f</span><span class="ruby-operator">|</span> <span class="ruby-constant">Feature</span>.<span class="ruby-identifier">new</span> <span class="ruby-identifier">:uri</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">f</span> }
+                                <span class="ruby-identifier">compounds</span>[<span class="ruby-identifier">c</span>[<span class="ruby-value str">'uri'</span>]] = <span class="ruby-identifier">features</span>
+                        <span class="ruby-keyword kw">end</span>
+                        <span class="ruby-identifier">compounds</span>
+                <span class="ruby-keyword kw">end</span>
+</pre>
+          </div>
+        </div>
+      </div>
+
+      <div id="method-M000014" class="method-detail">
+        <a name="M000014"></a>
+
+        <div class="method-heading">
+          <a href="#M000014" class="method-signature">
+          <span class="method-name">all_features</span><span class="method-args">()</span>
+          </a>
+        </div>
+      
+        <div class="method-description">
+          <p>
+Get all <a href="Dataset.html#M000015">features</a> from a dataset
+</p>
+          <p><a class="source-toggle" href="#"
+            onclick="toggleCode('M000014-source');return false;">[Source]</a></p>
+          <div class="method-source-code" id="M000014-source">
+<pre>
+<span class="ruby-comment cmt"># File lib/opentox-ruby-api-wrapper.rb, line 108</span>
+                <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">all_features</span>
+                        <span class="ruby-constant">RestClient</span>.<span class="ruby-identifier">get</span>(<span class="ruby-ivar">@uri</span> <span class="ruby-operator">+</span> <span class="ruby-value str">'/features'</span>).<span class="ruby-identifier">split</span>(<span class="ruby-value str">&quot;\n&quot;</span>).<span class="ruby-identifier">collect</span>{<span class="ruby-operator">|</span><span class="ruby-identifier">f</span><span class="ruby-operator">|</span> <span class="ruby-constant">Feature</span>.<span class="ruby-identifier">new</span>(<span class="ruby-identifier">:uri</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">f</span>)}
+                <span class="ruby-keyword kw">end</span>
+</pre>
+          </div>
+        </div>
+      </div>
+
+      <div id="method-M000012" class="method-detail">
+        <a name="M000012"></a>
+
+        <div class="method-heading">
+          <a href="#M000012" class="method-signature">
+          <span class="method-name">compounds</span><span class="method-args">()</span>
+          </a>
+        </div>
+      
+        <div class="method-description">
+          <p>
+Get all <a href="Dataset.html#M000012">compounds</a> from a dataset
+</p>
+          <p><a class="source-toggle" href="#"
+            onclick="toggleCode('M000012-source');return false;">[Source]</a></p>
+          <div class="method-source-code" id="M000012-source">
+<pre>
+<span class="ruby-comment cmt"># File lib/opentox-ruby-api-wrapper.rb, line 93</span>
+                <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">compounds</span>
+                        <span class="ruby-constant">RestClient</span>.<span class="ruby-identifier">get</span>(<span class="ruby-ivar">@uri</span> <span class="ruby-operator">+</span> <span class="ruby-value str">'/compounds'</span>).<span class="ruby-identifier">split</span>(<span class="ruby-value str">&quot;\n&quot;</span>).<span class="ruby-identifier">collect</span>{ <span class="ruby-operator">|</span><span class="ruby-identifier">c</span><span class="ruby-operator">|</span> <span class="ruby-constant">Compound</span>.<span class="ruby-identifier">new</span>(<span class="ruby-identifier">:uri</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">c</span>) }
+                <span class="ruby-keyword kw">end</span>
+</pre>
+          </div>
+        </div>
+      </div>
+
+      <div id="method-M000015" class="method-detail">
+        <a name="M000015"></a>
+
+        <div class="method-heading">
+          <a href="#M000015" class="method-signature">
+          <span class="method-name">features</span><span class="method-args">(compound)</span>
+          </a>
+        </div>
+      
+        <div class="method-description">
+          <p>
+Get all <a href="Dataset.html#M000015">features</a> for a compound
+</p>
+          <p><a class="source-toggle" href="#"
+            onclick="toggleCode('M000015-source');return false;">[Source]</a></p>
+          <div class="method-source-code" id="M000015-source">
+<pre>
+<span class="ruby-comment cmt"># File lib/opentox-ruby-api-wrapper.rb, line 113</span>
+                <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">features</span>(<span class="ruby-identifier">compound</span>)
+                        <span class="ruby-constant">RestClient</span>.<span class="ruby-identifier">get</span>(<span class="ruby-ivar">@uri</span> <span class="ruby-operator">+</span> <span class="ruby-value str">'/compound/'</span> <span class="ruby-operator">+</span> <span class="ruby-identifier">uri_escape</span>(<span class="ruby-identifier">compound</span>.<span class="ruby-identifier">uri</span>) <span class="ruby-operator">+</span> <span class="ruby-value str">'/features'</span>).<span class="ruby-identifier">split</span>(<span class="ruby-value str">&quot;\n&quot;</span>).<span class="ruby-identifier">collect</span>{<span class="ruby-operator">|</span><span class="ruby-identifier">f</span><span class="ruby-operator">|</span> <span class="ruby-constant">Feature</span>.<span class="ruby-identifier">new</span>(<span class="ruby-identifier">:uri</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">f</span>) }
+                <span class="ruby-keyword kw">end</span>
+</pre>
+          </div>
+        </div>
+      </div>
+
+      <div id="method-M000011" class="method-detail">
+        <a name="M000011"></a>
+
+        <div class="method-heading">
+          <a href="#M000011" class="method-signature">
+          <span class="method-name">name</span><span class="method-args">()</span>
+          </a>
+        </div>
+      
+        <div class="method-description">
+          <p>
+Get the dataset <a href="Dataset.html#M000011">name</a>
+</p>
+          <p><a class="source-toggle" href="#"
+            onclick="toggleCode('M000011-source');return false;">[Source]</a></p>
+          <div class="method-source-code" id="M000011-source">
+<pre>
+<span class="ruby-comment cmt"># File lib/opentox-ruby-api-wrapper.rb, line 88</span>
+                <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">name</span>
+                        <span class="ruby-constant">RestClient</span>.<span class="ruby-identifier">get</span> <span class="ruby-ivar">@uri</span> <span class="ruby-operator">+</span> <span class="ruby-value str">'/name'</span>
+                <span class="ruby-keyword kw">end</span>
+</pre>
+          </div>
+        </div>
+      </div>
+
+
+    </div>
+
+
+  </div>
+
+
+<div id="validator-badges">
+  <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
+</div>
+
+</body>
+</html>
+\ No newline at end of file
diff --git a/rdoc/classes/OpenTox/Feature.html b/rdoc/classes/OpenTox/Feature.html
new file mode 100644
index 0000000..5e53a12
--- /dev/null
+++ b/rdoc/classes/OpenTox/Feature.html
@@ -0,0 +1,217 @@
+<?xml version="1.0" encoding="iso-8859-1"?>
+<!DOCTYPE html 
+     PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
+     "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
+<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
+<head>
+  <title>Class: OpenTox::Feature</title>
+  <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
+  <meta http-equiv="Content-Script-Type" content="text/javascript" />
+  <link rel="stylesheet" href="../.././rdoc-style.css" type="text/css" media="screen" />
+  <script type="text/javascript">
+  // <![CDATA[
+
+  function popupCode( url ) {
+    window.open(url, "Code", "resizable=yes,scrollbars=yes,toolbar=no,status=no,height=150,width=400")
+  }
+
+  function toggleCode( id ) {
+    if ( document.getElementById )
+      elem = document.getElementById( id );
+    else if ( document.all )
+      elem = eval( "document.all." + id );
+    else
+      return false;
+
+    elemStyle = elem.style;
+    
+    if ( elemStyle.display != "block" ) {
+      elemStyle.display = "block"
+    } else {
+      elemStyle.display = "none"
+    }
+
+    return true;
+  }
+  
+  // Make codeblocks hidden by default
+  document.writeln( "<style type=\"text/css\">div.method-source-code { display: none }</style>" )
+  
+  // ]]>
+  </script>
+
+</head>
+<body>
+
+
+
+    <div id="classHeader">
+        <table class="header-table">
+        <tr class="top-aligned-row">
+          <td><strong>Class</strong></td>
+          <td class="class-name-in-header">OpenTox::Feature</td>
+        </tr>
+        <tr class="top-aligned-row">
+            <td><strong>In:</strong></td>
+            <td>
+                <a href="../../files/lib/opentox-ruby-api-wrapper_rb.html">
+                lib/opentox-ruby-api-wrapper.rb
+                </a>
+        <br />
+            </td>
+        </tr>
+
+        <tr class="top-aligned-row">
+            <td><strong>Parent:</strong></td>
+            <td>
+                <a href="OpenTox.html">
+                OpenTox
+               </a>
+            </td>
+        </tr>
+        </table>
+    </div>
+  <!-- banner header -->
+
+  <div id="bodyContent">
+
+
+
+  <div id="contextContent">
+
+
+
+   </div>
+
+    <div id="method-list">
+      <h3 class="section-bar">Methods</h3>
+
+      <div class="name-list">
+      <a href="#M000007">name</a>&nbsp;&nbsp;
+      <a href="#M000005">new</a>&nbsp;&nbsp;
+      <a href="#M000006">value</a>&nbsp;&nbsp;
+      </div>
+    </div>
+
+  </div>
+
+
+    <!-- if includes -->
+
+    <div id="section">
+
+
+
+
+
+      
+
+
+    <!-- if method_list -->
+    <div id="methods">
+      <h3 class="section-bar">Public Class methods</h3>
+
+      <div id="method-M000005" class="method-detail">
+        <a name="M000005"></a>
+
+        <div class="method-heading">
+          <a href="#M000005" class="method-signature">
+          <span class="method-name">new</span><span class="method-args">(params)</span>
+          </a>
+        </div>
+      
+        <div class="method-description">
+          <p>
+Initialize with <tt>:uri =&gt; uri</tt>, or <tt>:<a
+href="Feature.html#M000007">name</a> =&gt; <a
+href="Feature.html#M000007">name</a>, :values =&gt;
+hash_of_property_names_and_values</tt>
+</p>
+          <p><a class="source-toggle" href="#"
+            onclick="toggleCode('M000005-source');return false;">[Source]</a></p>
+          <div class="method-source-code" id="M000005-source">
+<pre>
+<span class="ruby-comment cmt"># File lib/opentox-ruby-api-wrapper.rb, line 52</span>
+                <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">params</span>)
+                        <span class="ruby-keyword kw">if</span> <span class="ruby-identifier">params</span>[<span class="ruby-identifier">:uri</span>]
+                                <span class="ruby-ivar">@uri</span> = <span class="ruby-identifier">params</span>[<span class="ruby-identifier">:uri</span>].<span class="ruby-identifier">to_s</span>
+                        <span class="ruby-keyword kw">else</span>
+                                <span class="ruby-ivar">@uri</span> = <span class="ruby-constant">ENV</span>[<span class="ruby-value str">'OPENTOX_FEATURES'</span>] <span class="ruby-operator">+</span> <span class="ruby-identifier">uri_escape</span>(<span class="ruby-identifier">params</span>[<span class="ruby-identifier">:name</span>]) 
+                                <span class="ruby-identifier">params</span>[<span class="ruby-identifier">:values</span>].<span class="ruby-identifier">each</span> <span class="ruby-keyword kw">do</span> <span class="ruby-operator">|</span><span class="ruby-identifier">k</span>,<span class="ruby-identifier">v</span><span class="ruby-operator">|</span>
+                                        <span class="ruby-ivar">@uri</span> <span class="ruby-operator">+=</span> <span class="ruby-value str">'/'</span> <span class="ruby-operator">+</span> <span class="ruby-identifier">k</span>.<span class="ruby-identifier">to_s</span> <span class="ruby-operator">+</span> <span class="ruby-value str">'/'</span> <span class="ruby-operator">+</span> <span class="ruby-identifier">v</span>.<span class="ruby-identifier">to_s</span>
+                                <span class="ruby-keyword kw">end</span>
+                        <span class="ruby-keyword kw">end</span>
+                <span class="ruby-keyword kw">end</span>
+</pre>
+          </div>
+        </div>
+      </div>
+
+      <h3 class="section-bar">Public Instance methods</h3>
+
+      <div id="method-M000007" class="method-detail">
+        <a name="M000007"></a>
+
+        <div class="method-heading">
+          <a href="#M000007" class="method-signature">
+          <span class="method-name">name</span><span class="method-args">()</span>
+          </a>
+        </div>
+      
+        <div class="method-description">
+          <p>
+Get the <a href="Feature.html#M000007">name</a> of the feature
+</p>
+          <p><a class="source-toggle" href="#"
+            onclick="toggleCode('M000007-source');return false;">[Source]</a></p>
+          <div class="method-source-code" id="M000007-source">
+<pre>
+<span class="ruby-comment cmt"># File lib/opentox-ruby-api-wrapper.rb, line 69</span>
+                <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">name</span>
+                        <span class="ruby-constant">RestClient</span>.<span class="ruby-identifier">get</span> <span class="ruby-ivar">@uri</span> <span class="ruby-operator">+</span> <span class="ruby-value str">'/name'</span>
+                <span class="ruby-keyword kw">end</span>
+</pre>
+          </div>
+        </div>
+      </div>
+
+      <div id="method-M000006" class="method-detail">
+        <a name="M000006"></a>
+
+        <div class="method-heading">
+          <a href="#M000006" class="method-signature">
+          <span class="method-name">value</span><span class="method-args">(property)</span>
+          </a>
+        </div>
+      
+        <div class="method-description">
+          <p>
+Get the <a href="Feature.html#M000006">value</a> of a property
+</p>
+          <p><a class="source-toggle" href="#"
+            onclick="toggleCode('M000006-source');return false;">[Source]</a></p>
+          <div class="method-source-code" id="M000006-source">
+<pre>
+<span class="ruby-comment cmt"># File lib/opentox-ruby-api-wrapper.rb, line 64</span>
+                <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">value</span>(<span class="ruby-identifier">property</span>)
+                        <span class="ruby-constant">RestClient</span>.<span class="ruby-identifier">get</span> <span class="ruby-ivar">@uri</span> <span class="ruby-operator">+</span> <span class="ruby-value str">'/'</span> <span class="ruby-operator">+</span> <span class="ruby-identifier">property</span>
+                <span class="ruby-keyword kw">end</span>
+</pre>
+          </div>
+        </div>
+      </div>
+
+
+    </div>
+
+
+  </div>
+
+
+<div id="validator-badges">
+  <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
+</div>
+
+</body>
+</html>
+\ No newline at end of file
diff --git a/rdoc/classes/OpenTox/Fminer.html b/rdoc/classes/OpenTox/Fminer.html
new file mode 100644
index 0000000..6c3b4fe
--- /dev/null
+++ b/rdoc/classes/OpenTox/Fminer.html
@@ -0,0 +1,178 @@
+<?xml version="1.0" encoding="iso-8859-1"?>
+<!DOCTYPE html 
+     PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
+     "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
+<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
+<head>
+  <title>Class: OpenTox::Fminer</title>
+  <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
+  <meta http-equiv="Content-Script-Type" content="text/javascript" />
+  <link rel="stylesheet" href="../.././rdoc-style.css" type="text/css" media="screen" />
+  <script type="text/javascript">
+  // <![CDATA[
+
+  function popupCode( url ) {
+    window.open(url, "Code", "resizable=yes,scrollbars=yes,toolbar=no,status=no,height=150,width=400")
+  }
+
+  function toggleCode( id ) {
+    if ( document.getElementById )
+      elem = document.getElementById( id );
+    else if ( document.all )
+      elem = eval( "document.all." + id );
+    else
+      return false;
+
+    elemStyle = elem.style;
+    
+    if ( elemStyle.display != "block" ) {
+      elemStyle.display = "block"
+    } else {
+      elemStyle.display = "none"
+    }
+
+    return true;
+  }
+  
+  // Make codeblocks hidden by default
+  document.writeln( "<style type=\"text/css\">div.method-source-code { display: none }</style>" )
+  
+  // ]]>
+  </script>
+
+</head>
+<body>
+
+
+
+    <div id="classHeader">
+        <table class="header-table">
+        <tr class="top-aligned-row">
+          <td><strong>Class</strong></td>
+          <td class="class-name-in-header">OpenTox::Fminer</td>
+        </tr>
+        <tr class="top-aligned-row">
+            <td><strong>In:</strong></td>
+            <td>
+                <a href="../../files/lib/opentox-ruby-api-wrapper_rb.html">
+                lib/opentox-ruby-api-wrapper.rb
+                </a>
+        <br />
+            </td>
+        </tr>
+
+        <tr class="top-aligned-row">
+            <td><strong>Parent:</strong></td>
+            <td>
+                <a href="OpenTox.html">
+                OpenTox
+               </a>
+            </td>
+        </tr>
+        </table>
+    </div>
+  <!-- banner header -->
+
+  <div id="bodyContent">
+
+
+
+  <div id="contextContent">
+
+
+
+   </div>
+
+    <div id="method-list">
+      <h3 class="section-bar">Methods</h3>
+
+      <div class="name-list">
+      <a href="#M000009">dataset</a>&nbsp;&nbsp;
+      <a href="#M000008">new</a>&nbsp;&nbsp;
+      </div>
+    </div>
+
+  </div>
+
+
+    <!-- if includes -->
+
+    <div id="section">
+
+
+
+
+
+      
+
+
+    <!-- if method_list -->
+    <div id="methods">
+      <h3 class="section-bar">Public Class methods</h3>
+
+      <div id="method-M000008" class="method-detail">
+        <a name="M000008"></a>
+
+        <div class="method-heading">
+          <a href="#M000008" class="method-signature">
+          <span class="method-name">new</span><span class="method-args">(training_dataset)</span>
+          </a>
+        </div>
+      
+        <div class="method-description">
+          <p>
+Create a <a href="Fminer.html#M000008">new</a> <a
+href="Fminer.html#M000009">dataset</a> with BBRC features
+</p>
+          <p><a class="source-toggle" href="#"
+            onclick="toggleCode('M000008-source');return false;">[Source]</a></p>
+          <div class="method-source-code" id="M000008-source">
+<pre>
+<span class="ruby-comment cmt"># File lib/opentox-ruby-api-wrapper.rb, line 127</span>
+                <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">training_dataset</span>)
+                        <span class="ruby-ivar">@dataset_uri</span> = <span class="ruby-constant">RestClient</span>.<span class="ruby-identifier">post</span> <span class="ruby-constant">ENV</span>[<span class="ruby-value str">'OPENTOX_FMINER'</span>], <span class="ruby-identifier">:dataset_uri</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">training_dataset</span>.<span class="ruby-identifier">uri</span>
+                <span class="ruby-keyword kw">end</span>
+</pre>
+          </div>
+        </div>
+      </div>
+
+      <h3 class="section-bar">Public Instance methods</h3>
+
+      <div id="method-M000009" class="method-detail">
+        <a name="M000009"></a>
+
+        <div class="method-heading">
+          <a href="#M000009" class="method-signature">
+          <span class="method-name">dataset</span><span class="method-args">()</span>
+          </a>
+        </div>
+      
+        <div class="method-description">
+          <p><a class="source-toggle" href="#"
+            onclick="toggleCode('M000009-source');return false;">[Source]</a></p>
+          <div class="method-source-code" id="M000009-source">
+<pre>
+<span class="ruby-comment cmt"># File lib/opentox-ruby-api-wrapper.rb, line 131</span>
+                <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">dataset</span>
+                        <span class="ruby-constant">Dataset</span>.<span class="ruby-identifier">new</span>(<span class="ruby-identifier">:uri</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-ivar">@dataset_uri</span>)
+                <span class="ruby-keyword kw">end</span>
+</pre>
+          </div>
+        </div>
+      </div>
+
+
+    </div>
+
+
+  </div>
+
+
+<div id="validator-badges">
+  <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
+</div>
+
+</body>
+</html>
+\ No newline at end of file
diff --git a/rdoc/classes/OpenTox/OpenTox.html b/rdoc/classes/OpenTox/OpenTox.html
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@@ -0,0 +1,162 @@
+<?xml version="1.0" encoding="iso-8859-1"?>
+<!DOCTYPE html 
+     PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
+     "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
+<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
+<head>
+  <title>Class: OpenTox::OpenTox</title>
+  <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
+  <meta http-equiv="Content-Script-Type" content="text/javascript" />
+  <link rel="stylesheet" href="../.././rdoc-style.css" type="text/css" media="screen" />
+  <script type="text/javascript">
+  // <![CDATA[
+
+  function popupCode( url ) {
+    window.open(url, "Code", "resizable=yes,scrollbars=yes,toolbar=no,status=no,height=150,width=400")
+  }
+
+  function toggleCode( id ) {
+    if ( document.getElementById )
+      elem = document.getElementById( id );
+    else if ( document.all )
+      elem = eval( "document.all." + id );
+    else
+      return false;
+
+    elemStyle = elem.style;
+    
+    if ( elemStyle.display != "block" ) {
+      elemStyle.display = "block"
+    } else {
+      elemStyle.display = "none"
+    }
+
+    return true;
+  }
+  
+  // Make codeblocks hidden by default
+  document.writeln( "<style type=\"text/css\">div.method-source-code { display: none }</style>" )
+  
+  // ]]>
+  </script>
+
+</head>
+<body>
+
+
+
+    <div id="classHeader">
+        <table class="header-table">
+        <tr class="top-aligned-row">
+          <td><strong>Class</strong></td>
+          <td class="class-name-in-header">OpenTox::OpenTox</td>
+        </tr>
+        <tr class="top-aligned-row">
+            <td><strong>In:</strong></td>
+            <td>
+                <a href="../../files/lib/opentox-ruby-api-wrapper_rb.html">
+                lib/opentox-ruby-api-wrapper.rb
+                </a>
+        <br />
+            </td>
+        </tr>
+
+        <tr class="top-aligned-row">
+            <td><strong>Parent:</strong></td>
+            <td>
+                Object
+            </td>
+        </tr>
+        </table>
+    </div>
+  <!-- banner header -->
+
+  <div id="bodyContent">
+
+
+
+  <div id="contextContent">
+
+
+
+   </div>
+
+    <div id="method-list">
+      <h3 class="section-bar">Methods</h3>
+
+      <div class="name-list">
+      <a href="#M000017">uri_escape</a>&nbsp;&nbsp;
+      </div>
+    </div>
+
+  </div>
+
+
+    <!-- if includes -->
+
+    <div id="section">
+
+
+
+
+
+    <div id="attribute-list">
+      <h3 class="section-bar">Attributes</h3>
+
+      <div class="name-list">
+        <table>
+        <tr class="top-aligned-row context-row">
+          <td class="context-item-name">uri</td>
+          <td class="context-item-value">&nbsp;[R]&nbsp;</td>
+          <td class="context-item-desc"></td>
+        </tr>
+        </table>
+      </div>
+    </div>
+      
+
+
+    <!-- if method_list -->
+    <div id="methods">
+      <h3 class="section-bar">Public Instance methods</h3>
+
+      <div id="method-M000017" class="method-detail">
+        <a name="M000017"></a>
+
+        <div class="method-heading">
+          <a href="#M000017" class="method-signature">
+          <span class="method-name">uri_escape</span><span class="method-args">(string)</span>
+          </a>
+        </div>
+      
+        <div class="method-description">
+          <p>
+Escape all nonword characters
+</p>
+          <p><a class="source-toggle" href="#"
+            onclick="toggleCode('M000017-source');return false;">[Source]</a></p>
+          <div class="method-source-code" id="M000017-source">
+<pre>
+<span class="ruby-comment cmt"># File lib/opentox-ruby-api-wrapper.rb, line 10</span>
+                <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">uri_escape</span>(<span class="ruby-identifier">string</span>)
+                        <span class="ruby-constant">URI</span>.<span class="ruby-identifier">escape</span>(<span class="ruby-identifier">string</span>, <span class="ruby-regexp re">/[^\w]/</span>)
+                <span class="ruby-keyword kw">end</span>
+</pre>
+          </div>
+        </div>
+      </div>
+
+
+    </div>
+
+
+  </div>
+
+
+<div id="validator-badges">
+  <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
+</div>
+
+</body>
+</html>
+\ No newline at end of file